View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18107_low_60 (Length: 249)

Name: NF18107_low_60
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18107_low_60
NF18107_low_60
[»] chr3 (8 HSPs)
chr3 (96-233)||(299923-300060)
chr3 (96-233)||(30952963-30953100)
chr3 (96-233)||(30968775-30968912)
chr3 (100-216)||(43183317-43183433)
chr3 (129-211)||(35272696-35272778)
chr3 (179-216)||(7639039-7639076)
chr3 (98-155)||(10939160-10939217)
chr3 (110-210)||(30075775-30075875)
[»] chr2 (2 HSPs)
chr2 (34-171)||(17976582-17976719)
chr2 (34-83)||(17984109-17984158)
[»] chr4 (5 HSPs)
chr4 (96-233)||(3071304-3071440)
chr4 (100-233)||(50650277-50650411)
chr4 (110-224)||(40388654-40388768)
chr4 (177-216)||(13159854-13159893)
chr4 (100-217)||(13531351-13531467)
[»] chr8 (1 HSPs)
chr8 (97-233)||(33154771-33154907)
[»] chr1 (6 HSPs)
chr1 (100-233)||(37095126-37095259)
chr1 (130-211)||(49907554-49907635)
chr1 (100-192)||(36011751-36011843)
chr1 (177-216)||(8303905-8303944)
chr1 (177-212)||(33567304-33567339)
chr1 (162-210)||(13260597-13260645)
[»] chr5 (3 HSPs)
chr5 (111-211)||(3170496-3170597)
chr5 (172-216)||(21270033-21270077)
chr5 (172-216)||(21272047-21272091)
[»] chr7 (3 HSPs)
chr7 (106-192)||(4105718-4105804)
chr7 (177-216)||(43656009-43656048)
chr7 (100-217)||(9660327-9660443)
[»] chr6 (4 HSPs)
chr6 (133-219)||(11651060-11651146)
chr6 (103-192)||(8934350-8934439)
chr6 (100-217)||(18575593-18575710)
chr6 (130-221)||(14236015-14236106)


Alignment Details
Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 299923 - 300060
Alignment:
Q  96 tcctttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacat 195  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  299923 tcctttggtccttgttgagaaagtaaagctactctcttttttatggttgaaagctaaacaaacatgcttttgttattgctatcatgattggtggagacat 300022  T
Q  196 ccactactttgtatggatgtctactaatttttgtctgt 233  Q
    || |||| |||||||| |||| ||||||||||||||||    
T  300023 ccgctaccttgtatgggtgtccactaatttttgtctgt 300060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 30953100 - 30952963
Alignment:
Q  96 tcctttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacat 195  Q
    ||||||||||||||||||||||||| |  |||| |||||||||||||||||||||||||| |||| |||||  ||||||| | |||||||||||||||||    
T  30953100 tcctttggtcctttttgagaaagtacaattactctcttttttgtggttgaaagctaaacagacatccttttactattgttttaatgattggtggagacat 30953001  T
Q  196 ccactactttgtatggatgtctactaatttttgtctgt 233  Q
    || |||| |||||||| |||| ||| ||||||||||||    
T  30953000 ccgctaccttgtatgggtgtccactgatttttgtctgt 30952963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 30968912 - 30968775
Alignment:
Q  96 tcctttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacat 195  Q
    ||||||||||||||||||||||||| |  |||| |||||||||||||||||||||||||| |||| |||||  ||||||| | |||||||||||||||||    
T  30968912 tcctttggtcctttttgagaaagtacaattactctcttttttgtggttgaaagctaaacagacatccttttactattgttttaatgattggtggagacat 30968813  T
Q  196 ccactactttgtatggatgtctactaatttttgtctgt 233  Q
    || |||| |||||||| |||| ||| ||||||||||||    
T  30968812 ccgctaccttgtatgggtgtccactgatttttgtctgt 30968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 43183317 - 43183433
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccac 199  Q
    |||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||||  ||| ||||| ||||||||||| || ||||||||| ||||| |    
T  43183317 ttggtcctttttgagagagtcaagttactttcttttttgtggttgaaagctaaacatgcatccttttattattgttatcgtgcttggtggaggcatccgc 43183416  T
Q  200 tactttgtatggatgtc 216  Q
    ||  |||||||||||||    
T  43183417 tatcttgtatggatgtc 43183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 35272778 - 35272696
Alignment:
Q  129 atcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtatgg 211  Q
    ||||||||||||| ||||||  |||||| ||| ||||  |||| ||||| |||||||||||| ||| ||  ||||||||||||    
T  35272778 atcttttttgtgggtgaaagtcaaacaaccatcctttatttatagttattatgattggtggaaacacccgttactttgtatgg 35272696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 7639076 - 7639039
Alignment:
Q  179 atgattggtggagacatccactactttgtatggatgtc 216  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  7639076 atgattggtggagacatccattactttgtttggatgtc 7639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 10939217 - 10939160
Alignment:
Q  98 ctttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaaca 155  Q
    ||||||| ||||| |||||||| ||| ||||||||||| ||||| ||||||| |||||    
T  10939217 ctttggttcttttagagaaagtcaagttactatcttttctgtggctgaaagcaaaaca 10939160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 30075875 - 30075775
Alignment:
Q  110 ttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtat 209  Q
    |||||||||| ||||||   || ||| ||||||||||||  | |||| | | ||||  || |||||||||||||||||||| |||||| || ||||||||    
T  30075875 ttgagaaagtcaagctaaattcatttatgtggttgaaagtaagacaagcgtcctttaatttttgttatcatgattggtggaaacatccgctcctttgtat 30075776  T
Q  210 g 210  Q
    |    
T  30075775 g 30075775  T

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Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 17976582 - 17976719
Alignment:
Q  34 atatgtgtatgaaactggttcaaagaagaaattgattgcgaagtaagatggtgtatggctattcctttggtcctttttgagaaagtaaagctactatctt 133  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||| | ||||    
T  17976582 atatgtgtatgaaactggttcaaagaagaaattgattgcaaagtaagatggtgtatggctactcctttagtccttgttgagaaagtaaagctattctctt 17976681  T
Q  134 ttttgtggttgaaagctaaacaaacatgcttttgttat 171  Q
    |||||||||||||||||||| | |||||||||||||||    
T  17976682 ttttgtggttgaaagctaaagagacatgcttttgttat 17976719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 17984109 - 17984158
Alignment:
Q  34 atatgtgtatgaaactggttcaaagaagaaattgattgcgaagtaagatg 83  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  17984109 atatgtgtatgaaactggttcaaagacgaaattgattgcaaagtaagatg 17984158  T

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Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 3071304 - 3071440
Alignment:
Q  96 tcctttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacat 195  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||||||||  |||||||||| |||||||||||||||||||||||||||||||| |    
T  3071304 tcctttggtcctttttgagaaagtaaagcttctctcttttttttggttgaaagtcaaacaaacatccttttgttattgttatcatgattggtggagacct 3071403  T
Q  196 ccactactttgtatggatgtctactaatttttgtctgt 233  Q
    || |||| ||| |||| || | ||||||||||||||||    
T  3071404 ccgctaccttg-atgggtgccaactaatttttgtctgt 3071440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 50650277 - 50650411
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgc-ttttgttattgttatcatgattggtggagacatcca 198  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||| | |||| ||| |||||||||||| ||||||||||||      
T  50650277 ttggtccttattgagaaagtaaagttactctcttttttgtggttgaaagctaaacaagcatccttttttttactgttatcatgataggtggagacatctg 50650376  T
Q  199 ctactttgtatggatgtctactaatttttgtctgt 233  Q
    |||| ||| ||||  ||| ||| |||| |||||||    
T  50650377 ctaccttgcatgggggtccactgatttatgtctgt 50650411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 40388768 - 40388654
Alignment:
Q  110 ttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtat 209  Q
    |||||||||  ||| |||| || ||||||||||||||||| |||||| | |  |||  ||| ||||||||||||||||||| |||||| |||||||||||    
T  40388768 ttgagaaagccaagttactctcatttttgtggttgaaagcaaaacaagcgtcttttatttactgttatcatgattggtggaaacatccgctactttgtat 40388669  T
Q  210 ggatgtctactaatt 224  Q
    ||||||| |||||||    
T  40388668 ggatgtccactaatt 40388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 13159893 - 13159854
Alignment:
Q  177 tcatgattggtggagacatccactactttgtatggatgtc 216  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  13159893 tcatgattggtggagacatccattactttgtttggatgtc 13159854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 13531467 - 13531351
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccac 199  Q
    ||||||||||| |||||||  ||| || ||||||| | |||| | |||||||||||| | |  |||  ||||||||||||||||||||||||| | || |    
T  13531467 ttggtccttttagagaaaggcaagttattatctttat-gtggcttaaagctaaacaagcttcttttcattattgttatcatgattggtggagatacccgc 13531369  T
Q  200 tactttgtatggatgtct 217  Q
    | | |||||||| |||||    
T  13531368 tgccttgtatgggtgtct 13531351  T

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Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 33154771 - 33154907
Alignment:
Q  97 cctttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatc 196  Q
    ||||||| |||| |||| ||||| ||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  33154771 cctttgggccttcttgaaaaagttaagttactctcttttttgtggttgaaagctaaacagacatccttttgttattgttatcatgattggtggagacatc 33154870  T
Q  197 cactactttgtatggatgtctactaatttttgtctgt 233  Q
    ||||   |||||||| |||| ||| ||||||||||||    
T  33154871 cactttcttgtatgggtgtccactgatttttgtctgt 33154907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 233
Target Start/End: Complemental strand, 37095259 - 37095126
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccac 199  Q
    |||||||||||||||| ||| ||| |||| |||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |    
T  37095259 ttggtcctttttgagagagtcaagttactttcttttttgtcgttgaaagctaaacatacatccttttattattgttatcatgattggtggagacatccgc 37095160  T
Q  200 tactttgtatggatgtctactaatttttgtctgt 233  Q
    ||  |||||||| |||| ||| |||  |||||||    
T  37095159 tatcttgtatgggtgtccactgattgatgtctgt 37095126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 49907554 - 49907635
Alignment:
Q  130 tcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtatgg 211  Q
    |||||| ||||||||||||| ||||| |||| ||||  ||| |||||||||||||||||||||||| | ||||||| |||||    
T  49907554 tcttttctgtggttgaaagcaaaacatacatcctttaattactgttatcatgattggtggagacattcgctactttatatgg 49907635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 36011843 - 36011751
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggaga 192  Q
    ||||| ||||| |||||||| |||||| |||||||| ||||| | |||||||| ||| | |  |||  |||||||||||||||||||||||||    
T  36011843 ttggttcttttagagaaagtcaagctattatcttttctgtggcttaaagctaatcaagcttcttttcattattgttatcatgattggtggaga 36011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 8303944 - 8303905
Alignment:
Q  177 tcatgattggtggagacatccactactttgtatggatgtc 216  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  8303944 tcatgattggtggagacatccactcctttatatggatgtc 8303905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 33567339 - 33567304
Alignment:
Q  177 tcatgattggtggagacatccactactttgtatgga 212  Q
    |||||||||||||||||||||||| |||||||||||    
T  33567339 tcatgattggtggagacatccactcctttgtatgga 33567304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 13260645 - 13260597
Alignment:
Q  162 cttttgttattgttatcatgattggtggagacatccactactttgtatg 210  Q
    |||| |||||||||||||||||| ||| | ||||||||| |||||||||    
T  13260645 ctttagttattgttatcatgattagtgaaaacatccactcctttgtatg 13260597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 3170496 - 3170597
Alignment:
Q  111 tgagaaagtaaagctactatcttttt-tgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtat 209  Q
    |||||||||||| || || ||||||| |||||||||||||||||||  ||| ||||||| ||| |||||| |||||||||| |||||| |||| ||||||    
T  3170496 tgagaaagtaaaacttctctctttttgtgtggttgaaagctaaacatgcatccttttgtcattattatcaagattggtggaaacatccgctaccttgtat 3170595  T
Q  210 gg 211  Q
    ||    
T  3170596 gg 3170597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 21270077 - 21270033
Alignment:
Q  172 tgttatcatgattggtggagacatccactactttgtatggatgtc 216  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  21270077 tgttatcatgattggtggcgacatccactactttgtatgggtgtc 21270033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 21272091 - 21272047
Alignment:
Q  172 tgttatcatgattggtggagacatccactactttgtatggatgtc 216  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  21272091 tgttatcatgattggtggcgacatccactactttgtatgggtgtc 21272047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 4105804 - 4105718
Alignment:
Q  106 ctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggaga 192  Q
    ||||| |||||||| |||||| |||||||||||||| | |||||||| ||| | |  |||  |||||||||||||||||||||||||    
T  4105804 cttttagagaaagtcaagctattatcttttttgtggcttaaagctaatcaagcttcttttcattattgttatcatgattggtggaga 4105718  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 43656009 - 43656048
Alignment:
Q  177 tcatgattggtggagacatccactactttgtatggatgtc 216  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  43656009 tcatgattggtggagacatccactcctttgtatgggtgtc 43656048  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 9660443 - 9660327
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccac 199  Q
    ||||||||||| |||||||  ||| || ||||||| | |||| | |||||||||||| | |  |||  ||||||||||||||||||||||||| | || |    
T  9660443 ttggtccttttagagaaaggcaagttattatctttat-gtggcttaaagctaaacaagcttcttttcattattgttatcatgattggtggagatacccgc 9660345  T
Q  200 tactttgtatggatgtct 217  Q
    | | |||||||| |||||    
T  9660344 tgccttgtatgggtgtct 9660327  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 11651146 - 11651060
Alignment:
Q  133 tttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtatggatgtctac 219  Q
    ||||||||||||||||| |||||  | | ||||  ||| ||||||||||| ||||||| |||||| |||| |||||||| |||||||    
T  11651146 tttttgtggttgaaagcaaaacaggcgtcctttaattactgttatcatgactggtggaaacatcctctaccttgtatgggtgtctac 11651060  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 8934350 - 8934439
Alignment:
Q  103 gtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggaga 192  Q
    |||||||| |||||||| ||| || |||||||| ||||| | |||||||||||| | |  |||  || ||||||||||||||||||||||    
T  8934350 gtccttttagagaaagtcaagttattatcttttctgtggcttaaagctaaacaagcttcttttcatttttgttatcatgattggtggaga 8934439  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 18575593 - 18575710
Alignment:
Q  100 ttggtcctttttgagaaagtaaagctactatcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccac 199  Q
    ||||||||||| |||||||| ||| || |||||||  ||||| | |||||||||||| | |  |||  |||||||||| |||||||||||||| |||  |    
T  18575593 ttggtccttttagagaaagtcaagttattatctttcatgtggctaaaagctaaacaagcttcttttcattattgttatgatgattggtggagatatcagc 18575692  T
Q  200 tactttgtatggatgtct 217  Q
    | | |||||||| |||||    
T  18575693 tgccttgtatgggtgtct 18575710  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 14236015 - 14236106
Alignment:
Q  130 tcttttttgtggttgaaagctaaacaaacatgcttttgttattgttatcatgattggtggagacatccactactttgtatggatgtctacta 221  Q
    |||||||||||||||||||  ||||| |||| | ||  ||||||||||||||  ||||||| ||| || |||| |||||||| ||| |||||    
T  14236015 tcttttttgtggttgaaagtaaaacagacatcccttaattattgttatcatggctggtggaaacacccgctaccttgtatgggtgtttacta 14236106  T

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