View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18107_low_61 (Length: 248)
Name: NF18107_low_61
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18107_low_61 |
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Alignment Details
Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 5113086 - 5112947
Alignment:
| Q |
92 |
aacaatgatcaaaaccttaaatccatacccaaatccagcaaaaacagctgagattatgtcaaggtatagaccaatagcaccaaagccagaaacatgttca |
191 |
Q |
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| T |
5113086 |
aacaatgatcaaaaccttaaatccatacccaaatccagcaaaaacagctgagattatgtcaaggtatagaccaatagcaccaaagccagaaacatgttca |
5112987 |
T |
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| Q |
192 |
agtaacaattcaacgagtgatggatcttcatcatcaaact |
231 |
Q |
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|||||||||||||| ||||||||||||||||||||||||| |
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| T |
5112986 |
agtaacaattcaactagtgatggatcttcatcatcaaact |
5112947 |
T |
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