View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18107_low_62 (Length: 247)
Name: NF18107_low_62
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18107_low_62 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 49437451 - 49437237
Alignment:
| Q |
15 |
caaaggggatgatcatgtatagtcttaggatcatttataaactacacatatgcaactttgaattctatctcaataagatcttccatttgaaagatcctta |
114 |
Q |
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| T |
49437451 |
caaaggggatgatcatgtatagtcttaggatcatttataaactacacatatgcaactttgaattctatctcaataagatcttccatttgaaagatcttta |
49437352 |
T |
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| Q |
115 |
tgttttaaaatagttttttagccttggttagctcatcggtccacagctctgttttttgagtacaagtaaatacactctatattgttcgttgatgcgagag |
214 |
Q |
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| T |
49437351 |
tgttttaaaatagttttttacccttggttagctcatcggtccacagctctgttttttgagttcaagaaaatacactctatattgttcgttgatacgagag |
49437252 |
T |
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| Q |
215 |
aaaccataagataat |
229 |
Q |
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| T |
49437251 |
aaaccataagataat |
49437237 |
T |
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