View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18107_low_63 (Length: 244)
Name: NF18107_low_63
Description: NF18107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18107_low_63 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 6449901 - 6450138
Alignment:
| Q |
15 |
acatcctcttaaaaggactacattttg-attcaaatgatgataacaagtaaaaaattatcagt-atcacattacaacatacacacaaaatataattttac |
112 |
Q |
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| T |
6449901 |
acatcctcttaaaaggactacattttgtattcaaatgatgataacaagtagaaaattatcagttatcacattacaacatacacacaaaatataattttac |
6450000 |
T |
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| Q |
113 |
taaaatataatattaagaagttcgggatgtaacattgttcctccactattttgatggga---aagagttcaaagttgatcttcaacttaatgactttgtc |
209 |
Q |
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| T |
6450001 |
taaaatataatattaagaagttcgggatgtaacattgttcctccactattttgatgggaaagaagagttcaaagttgatcttcaacttaatgactttgtc |
6450100 |
T |
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| Q |
210 |
---aataaggttgaaagttgatgtcagaaactaaactc |
244 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
6450101 |
aataataaggttgaaagttgatgtcagaaactaaactc |
6450138 |
T |
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