View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18108_low_36 (Length: 227)
Name: NF18108_low_36
Description: NF18108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18108_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 45271441 - 45271255
Alignment:
| Q |
18 |
attttaatcataaaaaactacaaaactaagactaaaacaatactcaaggggttgatattaggcgaagatgtttaacaattcattnnnnnnnnnntatatc |
117 |
Q |
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| T |
45271441 |
attttaatcataaaaaactacaaaactaagactaaaacaatactcaaggggttgatattaggcgaagatgtttaacaattcattaaaaaaaaaatatatc |
45271342 |
T |
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| Q |
118 |
atcaagtaatgcctagaaatgcaaaaaattagattgaaaagtgaactgcttcatgacttaaccagcattcaaaagaactacaactct |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45271341 |
atcaagtaatgcctagaaatgcaaaaaattagattgaaaagtgaactgcttcatgacttaaccagcattcaaaagaactacaactct |
45271255 |
T |
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