View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18109_low_11 (Length: 368)
Name: NF18109_low_11
Description: NF18109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18109_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 13 - 352
Target Start/End: Complemental strand, 32805214 - 32804875
Alignment:
| Q |
13 |
taggatcatctgacaatttttgttgattatatattagtttcattaaaggtataaaccttaatgttaatgggagcctgagaggcactatttcatctattct |
112 |
Q |
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| T |
32805214 |
taggatcatctgacaatttttgttgattatatattagtttcattaaaggtataaaccttaatgttaatgggagcctgagaggcactatttcatctattct |
32805115 |
T |
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| Q |
113 |
aggaatcgagaagaacgttggttttacattttgaatcctcgactacttgattgacattaattgtagttgacctagggtttagggtgtttcagataatggt |
212 |
Q |
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| T |
32805114 |
aggaatcaagaagaacgttggttttacattttgaatcctcggctgcttgattgacattaactgtagttgacctagggtttagggtgtttcagataatggt |
32805015 |
T |
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| Q |
213 |
tgaaagccaagtcattggttttgtgttctcaatcagcaatatgataattgcgcctatttgttaggggaacgtttgcaccatcttatggttgctgcagcta |
312 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32805014 |
tgaaagccaagtcattggttttgtgttctcaattagcaatatgataattgcgcctatttgttaggggaacgtttgcaccatcttatggttgctgcagcta |
32804915 |
T |
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| Q |
313 |
aacacttttcaatgaattttgtgttaggacaacaagattc |
352 |
Q |
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| T |
32804914 |
aacacttttcaatgaattttgtgttaggacaacaagattc |
32804875 |
T |
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