View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1810_low_10 (Length: 235)
Name: NF1810_low_10
Description: NF1810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1810_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 1168049 - 1168266
Alignment:
| Q |
18 |
aaaattatagtaatgaagaagaaaaatggagagaattctaactcctgatcgcttctcggcataccgcaccagaatgcttcaccaaatcaagacgagctag |
117 |
Q |
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| T |
1168049 |
aaaattatagtaatgaagaagaaaaatggagagaattctaactcctgatcgcttctcggcataccgcaccagaatgcttcaccaaatcaagacgagctag |
1168148 |
T |
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| Q |
118 |
caagcattaaaacattttacctgataccttctgcacaattcattccgtaagaataaacttgtcgcatgcttttttaggatctgcacacactaatacaacg |
217 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
1168149 |
caagcattaaaacattttacctgataccttctacacaattcattccctaagaataaacttgtcgcatgcttttttaggatctgcacacactaatacaatg |
1168248 |
T |
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| Q |
218 |
ataaattcaacaacaaaa |
235 |
Q |
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|||||||||||||||||| |
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| T |
1168249 |
ataaattcaacaacaaaa |
1168266 |
T |
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