View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18110_high_10 (Length: 213)
Name: NF18110_high_10
Description: NF18110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18110_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 33402707 - 33402516
Alignment:
| Q |
1 |
ccaaaaatccaatcatcccatcaccattcagattctcaccacccctgaaaacactgaagtaaccgacaccgacatgtcttctggtcccatgattgatacc |
100 |
Q |
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| T |
33402707 |
ccaaaaatccaatcatcccatcaccattcagattctcaccacccctgaaaacactgaagtaactgacaccgacatgtctgctggtcccatgatcgatacc |
33402608 |
T |
|
| Q |
101 |
tcgattctgcttgaacctctgaaacagttcctagtccaacacagaccggacggtatagttgttgacatgtttcatcgttgggctggcgacat |
192 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33402607 |
tcgattctccttgaacctctgaaacagttcctagtccaacacagaccggacggtatagttgttgacatgtttcatcgttgggctggcgacat |
33402516 |
T |
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