View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18114_high_9 (Length: 386)
Name: NF18114_high_9
Description: NF18114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18114_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 26425340 - 26425693
Alignment:
| Q |
13 |
cagacaccatgacattcctcaaacatccaaatttgcaattttaaaaccacaatccacccaacattgcttccatgcgtgaatactttgtccatactcaaaa |
112 |
Q |
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| T |
26425340 |
cagacaccatgacattcctcaaacatccaaatttacaattttaaaaccacaatccacccaacattgtttccatgcgtgaatactttgtccatactcaaaa |
26425439 |
T |
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| Q |
113 |
tccttcaacttaggccaaagcttagttaaatttttccataagcataaatcattagacttagctatgacattatcaagatcatgggtaacattacggcaat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26425440 |
tccttcaacttaggccaaagcttagttaaatttttccataagcataaatcattagacttagctatgacattatcaagatcatgggtatcattacggcaat |
26425539 |
T |
|
| Q |
213 |
acttaccttgcataacatcacaccataaagccttctcaccacacaaaatcttccatcttattttaataaggcaaagcttggttcatttcgtcaagtcttc |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
26425540 |
acttaccttgcataacatcacaccataaagccttctcaccacacaaaatcttccatcttattttcataaggcaaagcttggttcatttcgtcaagtcttc |
26425639 |
T |
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| Q |
313 |
taatgtcctgcattccaacattctttggatgtgaaacaaccacctaaatgatca |
366 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26425640 |
taatgtcctgcattccaacattctttggatgtgaaacaaccacctaaatgatca |
26425693 |
T |
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