View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18115_high_10 (Length: 416)

Name: NF18115_high_10
Description: NF18115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18115_high_10
NF18115_high_10
[»] chr6 (16 HSPs)
chr6 (1-157)||(15576375-15576531)
chr6 (240-395)||(15576189-15576344)
chr6 (180-330)||(16527772-16527913)
chr6 (180-308)||(1755666-1755794)
chr6 (241-330)||(30355260-30355349)
chr6 (180-297)||(12972509-12972626)
chr6 (224-323)||(15574842-15574941)
chr6 (23-158)||(17860693-17860828)
chr6 (239-287)||(12974270-12974318)
chr6 (330-381)||(13194291-13194342)
chr6 (20-90)||(15574638-15574708)
chr6 (21-87)||(16527027-16527093)
chr6 (200-245)||(7837121-7837166)
chr6 (205-245)||(17695705-17695745)
chr6 (331-400)||(6091920-6091989)
chr6 (205-245)||(11126599-11126639)
[»] chr1 (28 HSPs)
chr1 (180-330)||(23223284-23223434)
chr1 (180-316)||(21451921-21452057)
chr1 (184-330)||(30675360-30675507)
chr1 (180-279)||(15299012-15299111)
chr1 (239-330)||(50047113-50047204)
chr1 (239-316)||(12424020-12424097)
chr1 (180-308)||(31313425-31313553)
chr1 (251-330)||(26657420-26657499)
chr1 (331-402)||(50048239-50048310)
chr1 (34-156)||(21452099-21452221)
chr1 (238-323)||(11770093-11770178)
chr1 (239-323)||(25730670-25730754)
chr1 (240-321)||(25777932-25778013)
chr1 (239-330)||(12810256-12810345)
chr1 (255-307)||(34935297-34935349)
chr1 (262-304)||(25266462-25266504)
chr1 (78-160)||(30675235-30675317)
chr1 (330-400)||(34522115-34522185)
chr1 (239-323)||(8247756-8247840)
chr1 (200-245)||(22624837-22624882)
chr1 (251-308)||(25965488-25965545)
chr1 (205-245)||(21914855-21914895)
chr1 (237-297)||(26101987-26102047)
chr1 (333-395)||(17836791-17836853)
chr1 (322-400)||(23224619-23224697)
chr1 (333-395)||(30676667-30676729)
chr1 (205-245)||(21912072-21912112)
chr1 (331-395)||(27682929-27682993)
[»] chr5 (32 HSPs)
chr5 (180-323)||(17027400-17027543)
chr5 (180-308)||(24841626-24841754)
chr5 (205-308)||(11274445-11274547)
chr5 (1-160)||(11274630-11274788)
chr5 (180-265)||(12029493-12029578)
chr5 (239-323)||(25594791-25594875)
chr5 (247-330)||(17382127-17382210)
chr5 (239-330)||(30072111-30072201)
chr5 (181-317)||(22754829-22754958)
chr5 (4-87)||(22754635-22754718)
chr5 (238-313)||(22967951-22968026)
chr5 (2-113)||(24841441-24841551)
chr5 (20-105)||(17027231-17027316)
chr5 (263-330)||(24517310-24517377)
chr5 (330-395)||(11273683-11273748)
chr5 (21-160)||(23125219-23125359)
chr5 (247-330)||(12340106-12340187)
chr5 (239-316)||(22229741-22229818)
chr5 (180-297)||(22643989-22644105)
chr5 (330-402)||(17768641-17768713)
chr5 (331-395)||(19571048-19571112)
chr5 (205-245)||(20860430-20860470)
chr5 (205-245)||(34133866-34133906)
chr5 (185-232)||(11274548-11274595)
chr5 (331-381)||(24518964-24519014)
chr5 (238-308)||(24846192-24846262)
chr5 (239-315)||(15205577-15205653)
chr5 (331-400)||(18451061-18451130)
chr5 (22-70)||(19331267-19331315)
chr5 (205-245)||(22938049-22938089)
chr5 (335-395)||(25682147-25682207)
chr5 (236-308)||(26070404-26070475)
[»] chr2 (23 HSPs)
chr2 (180-323)||(28278522-28278664)
chr2 (238-330)||(21505231-21505323)
chr2 (184-308)||(39730324-39730448)
chr2 (180-305)||(31449830-31449955)
chr2 (183-297)||(32276638-32276752)
chr2 (251-308)||(32619586-32619643)
chr2 (21-113)||(17415496-17415588)
chr2 (36-156)||(28278704-28278823)
chr2 (330-402)||(31000597-31000669)
chr2 (239-330)||(35707735-35707826)
chr2 (239-330)||(25473969-25474060)
chr2 (239-306)||(18236418-18236485)
chr2 (248-330)||(1733042-1733123)
chr2 (228-278)||(29769610-29769660)
chr2 (180-277)||(27918127-27918224)
chr2 (180-244)||(22388934-22388997)
chr2 (205-245)||(1504312-1504352)
chr2 (205-245)||(20379377-20379417)
chr2 (205-245)||(25873169-25873209)
chr2 (205-245)||(25886157-25886197)
chr2 (332-400)||(28455128-28455196)
chr2 (256-308)||(31914047-31914099)
chr2 (205-245)||(45456266-45456306)
[»] chr4 (23 HSPs)
chr4 (180-314)||(1676403-1676537)
chr4 (180-314)||(1682931-1683065)
chr4 (1-112)||(1696893-1697004)
chr4 (180-316)||(1696675-1696809)
chr4 (241-316)||(15192137-15192212)
chr4 (180-267)||(34850752-34850839)
chr4 (255-330)||(34864383-34864458)
chr4 (242-306)||(12111446-12111510)
chr4 (237-308)||(18897921-18897992)
chr4 (238-323)||(5906819-5906905)
chr4 (225-291)||(10576371-10576437)
chr4 (331-401)||(47023552-47023622)
chr4 (330-393)||(20717941-20718004)
chr4 (239-301)||(9288142-9288204)
chr4 (330-394)||(12840697-12840761)
chr4 (331-395)||(22219945-22220009)
chr4 (239-330)||(25315323-25315414)
chr4 (357-400)||(24580004-24580047)
chr4 (260-323)||(25050164-25050227)
chr4 (341-392)||(30797703-30797754)
chr4 (247-291)||(10320350-10320394)
chr4 (240-308)||(17339927-17339995)
chr4 (205-245)||(19826667-19826707)
[»] chr3 (24 HSPs)
chr3 (181-329)||(21017750-21017899)
chr3 (180-305)||(13911138-13911263)
chr3 (239-322)||(25919564-25919647)
chr3 (180-279)||(8402693-8402792)
chr3 (239-330)||(17637035-17637126)
chr3 (180-244)||(5632668-5632732)
chr3 (206-257)||(11521039-11521090)
chr3 (21-69)||(5632859-5632907)
chr3 (270-330)||(33914654-33914714)
chr3 (248-322)||(12573231-12573305)
chr3 (248-322)||(13549695-13549769)
chr3 (243-308)||(16970177-16970241)
chr3 (239-316)||(19219317-19219394)
chr3 (336-400)||(10343000-10343064)
chr3 (205-245)||(10883984-10884024)
chr3 (1-156)||(11520816-11520971)
chr3 (239-306)||(18065761-18065828)
chr3 (239-328)||(1475374-1475463)
chr3 (242-308)||(31477705-31477771)
chr3 (334-395)||(33913400-33913461)
chr3 (205-245)||(16223572-16223612)
chr3 (205-245)||(18541774-18541814)
chr3 (205-245)||(31283869-31283909)
chr3 (205-245)||(47053927-47053967)
[»] chr7 (42 HSPs)
chr7 (180-316)||(7494584-7494720)
chr7 (184-330)||(20470902-20471049)
chr7 (184-323)||(21471674-21471813)
chr7 (1-156)||(21471473-21471628)
chr7 (239-330)||(29544451-29544542)
chr7 (180-291)||(9761537-9761646)
chr7 (184-281)||(3269123-3269220)
chr7 (239-335)||(2632523-2632619)
chr7 (239-308)||(7142030-7142099)
chr7 (21-87)||(5722098-5722164)
chr7 (229-291)||(9801996-9802057)
chr7 (330-400)||(21544679-21544749)
chr7 (241-305)||(2353357-2353421)
chr7 (239-330)||(20446171-20446262)
chr7 (239-331)||(23124833-23124924)
chr7 (331-402)||(7494484-7494555)
chr7 (184-307)||(16536689-16536811)
chr7 (180-307)||(16577387-16577513)
chr7 (180-307)||(16588149-16588275)
chr7 (184-307)||(16628851-16628973)
chr7 (180-262)||(1074341-1074422)
chr7 (180-241)||(7956058-7956119)
chr7 (240-297)||(18496498-18496555)
chr7 (239-291)||(21545929-21545984)
chr7 (330-398)||(7143571-7143639)
chr7 (330-402)||(7776350-7776422)
chr7 (205-245)||(13287676-13287716)
chr7 (205-245)||(26137034-26137074)
chr7 (336-395)||(9071392-9071451)
chr7 (331-402)||(18494555-18494626)
chr7 (326-381)||(21473039-21473094)
chr7 (251-316)||(7815267-7815332)
chr7 (235-281)||(22532784-22532830)
chr7 (357-398)||(7152116-7152157)
chr7 (331-392)||(14074486-14074547)
chr7 (331-392)||(14384514-14384575)
chr7 (205-245)||(2506786-2506826)
chr7 (205-245)||(4596918-4596958)
chr7 (205-245)||(15170730-15170770)
chr7 (205-245)||(19154909-19154949)
chr7 (205-245)||(20754308-20754348)
chr7 (205-245)||(39270239-39270279)
[»] chr8 (35 HSPs)
chr8 (183-330)||(24120107-24120254)
chr8 (180-330)||(16052369-16052519)
chr8 (188-308)||(22894648-22894768)
chr8 (1-160)||(16052557-16052716)
chr8 (232-322)||(28252481-28252571)
chr8 (180-330)||(28901432-28901582)
chr8 (180-330)||(10866861-10867011)
chr8 (222-330)||(13082029-13082137)
chr8 (19-160)||(24119925-24120066)
chr8 (2-93)||(28901685-28901776)
chr8 (184-265)||(5570305-5570386)
chr8 (249-330)||(12956431-12956512)
chr8 (249-330)||(14977199-14977280)
chr8 (184-267)||(28973490-28973573)
chr8 (247-308)||(11310318-11310379)
chr8 (238-330)||(16054225-16054317)
chr8 (206-291)||(29291670-29291755)
chr8 (239-330)||(32239219-32239310)
chr8 (238-336)||(6358629-6358727)
chr8 (330-392)||(12957559-12957621)
chr8 (22-79)||(5570508-5570565)
chr8 (20-113)||(12755894-12755987)
chr8 (330-395)||(32240446-32240511)
chr8 (239-330)||(29047408-29047499)
chr8 (332-395)||(13305658-13305721)
chr8 (330-381)||(13803096-13803147)
chr8 (20-67)||(22894905-22894952)
chr8 (21-87)||(28292459-28292525)
chr8 (237-291)||(30851230-30851284)
chr8 (200-245)||(26829427-26829472)
chr8 (357-402)||(26853601-26853646)
chr8 (205-245)||(25180687-25180727)
chr8 (205-245)||(29765357-29765397)
chr8 (255-307)||(30543711-30543763)
chr8 (205-245)||(33878232-33878272)
[»] scaffold0282 (1 HSPs)
scaffold0282 (184-306)||(22661-22783)
[»] scaffold1026 (1 HSPs)
scaffold1026 (182-301)||(1952-2071)
[»] scaffold0171 (3 HSPs)
scaffold0171 (239-316)||(6128-6205)
scaffold0171 (331-403)||(7349-7421)
scaffold0171 (246-308)||(21336-21398)
[»] scaffold0386 (2 HSPs)
scaffold0386 (239-315)||(8816-8892)
scaffold0386 (254-323)||(13170-13239)
[»] scaffold0002 (1 HSPs)
scaffold0002 (239-316)||(446937-447014)
[»] scaffold0188 (1 HSPs)
scaffold0188 (248-308)||(27068-27128)
[»] scaffold0990 (1 HSPs)
scaffold0990 (23-92)||(3168-3237)
[»] scaffold0048 (2 HSPs)
scaffold0048 (205-245)||(24001-24041)
scaffold0048 (205-245)||(28239-28279)
[»] scaffold0210 (1 HSPs)
scaffold0210 (180-242)||(25216-25278)
[»] scaffold0084 (1 HSPs)
scaffold0084 (205-246)||(28544-28585)
[»] scaffold0321 (1 HSPs)
scaffold0321 (205-245)||(3841-3881)
[»] scaffold0270 (1 HSPs)
scaffold0270 (205-245)||(1054-1094)
[»] scaffold0198 (1 HSPs)
scaffold0198 (200-244)||(3979-4023)
[»] scaffold0072 (1 HSPs)
scaffold0072 (205-245)||(38382-38422)


Alignment Details
Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 15576531 - 15576375
Alignment:
Q  1 gccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgc 100  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  15576531 gccttgaccagccccaccggctttaggaggtatatacgtgtatcttggaattttatttggttgaaagtaattgtatcttctctaagtttgttcctcttgc 15576432  T
Q  101 atggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaaa 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15576431 atggaaatggtaatatagttacgtctgacggtgggatgagtgacaatctgagcaaaa 15576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 240 - 395
Target Start/End: Complemental strand, 15576344 - 15576189
Alignment:
Q  240 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgttgatggacg 339  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15576344 gatgatggagcatcatatgatatttttggctatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagaggagttgttgatggacg 15576245  T
Q  340 aaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  15576244 aaattggcaagtgcatcaaatcgtaacaagtaataaagtagtcagtttatcgttct 15576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 16527772 - 16527913
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||| |||||||||   ||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  16527772 attctaacgtcttgctat---gttgcttgaggacaagaaccggtttaagtttggggttgtgatggcagagcatcatataatatttttggctatgttttta 16527868  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||||||      |||||||||| ||||||| |||||| ||||||    
T  16527869 gtacttttctttg------aagacaaataagatgagagttagaggagttgt 16527913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 1755794 - 1755666
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||||| || ||| |||| || ||||||| | ||  ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  1755794 attctaacttctcgcaattttgttgctagaggacaggtaatagtttaagtttggggttgtgatgacggagcatcatatgatatatcaggttatgttttta 1755695  T
Q  280 gtacttttctttgaatttaaagacaaata 308  Q
    ||  |||||||||||||| ||||||||||    
T  1755694 gttattttctttgaatttgaagacaaata 1755666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 30355260 - 30355349
Alignment:
Q  241 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||| |||  ||||| ||||||| |||||| ||||||    
T  30355260 atgacggagcatcatatgatatttttggctatgtttttagtacttttacttgcatttgaaggtaaataagatgagagttagagaagttgt 30355349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 12972626 - 12972509
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||| |||||||| || | ||| || | ||| |||  |||||||||||||| |||||||  || |||||| |||||||||||| ||||||||||    
T  12972626 attctaacttgttgctattttggtgctttagaagaagcaacaatttaagtttggggtagtgatgatagaacatcatttgatatttttggctatgttttta 12972527  T
Q  280 gtacttttctttgaattt 297  Q
    ||  ||||||||| ||||    
T  12972526 gttattttctttgcattt 12972509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 323
Target Start/End: Original strand, 15574842 - 15574941
Alignment:
Q  224 ttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 322  Q
    |||||||||||||| ||||||| || |||||||||| | |||||| ||| || ||||||| ||||||||| |||| |||||||||| ||||||| |||||    
T  15574842 ttaagtttggggttatgatgacagaacatcatatgaca-ttttggctatcttgttagtactttttctttgcatttgaagacaaataagatgagatttaga 15574940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 17860828 - 17860693
Alignment:
Q  23 ttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttac 122  Q
    |||||||||||||| |||||| || ||||| ||| |||||||||||||  |||| ||||||||   |||||  |||||||||||  |||||  ||||||     
T  17860828 ttaggaggtacatatgtgtatattagaattgtatgtggttgaaagtaagagtatgttctctaaaaatgttccgcttgcatggaagaggtaagctagttaa 17860729  T
Q  123 gtctgatggtgggatgagtgacaatctgagcaaaat 158  Q
    |||||||| ||||  || | | ||||||||||||||    
T  17860728 gtctgatgatgggtggaataaaaatctgagcaaaat 17860693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 12974270 - 12974318
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt 287  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||    
T  12974270 tgatgacggagcatcatatgatattttttgctatggttttagtactttt 12974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 13194342 - 13194291
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 381  Q
    ||||||||||||||| |||||| ||  |||||||||||||||||||||||||    
T  13194342 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagt 13194291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 15574638 - 15574708
Alignment:
Q  20 gctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttg 90  Q
    ||||||| || |||||| ||||||||||||||  ||| |||||||||||||  ||||| ||||||||||||    
T  15574638 gctttagaagatacatatgtgtatcttggaatcatatgtggttgaaagtaagagtatcctctctaagtttg 15574708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 16527027 - 16527093
Alignment:
Q  21 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 87  Q
    ||||| |||||||||| |||||||||| |||| ||| ||||||||| |||  |||||||||||||||    
T  16527027 ctttaagaggtacatatgtgtatcttgaaattgtatgtggttgaaattaagagtatcttctctaagt 16527093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 7837121 - 7837166
Alignment:
Q  200 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  7837121 tgtttcttgaggacaagtaacagtttaagtttgaggttgtgatgac 7837166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 17695705 - 17695745
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  17695705 cttgaggacaaggaatggtttaagtttggggttgtgatgac 17695745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 6091920 - 6091989
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    ||||||||||||||  ||||| ||| ||||||||| || |||||||||||  || |||||||||| ||||    
T  6091920 tgatggacgaaattgacaagtgcattaaatcgtaaaaaataataaagtagaaagtttatcgttctccaca 6091989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 11126639 - 11126599
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    ||||||||| ||||| |||| ||||||||||||||||||||    
T  11126639 cttgaggactagaaatggttcaagtttggggttgtgatgac 11126599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 23223284 - 23223434
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||| |||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  23223284 attctaacttctttctattgtgttgcttaaggacaagaaacaatttaagtttggggttgtgatgacggagcatcatatgatgtttttggctatgttttaa 23223383  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||||| ||||  |||||| || |||| || |||||| ||||||    
T  23223384 gtacttttctttgcattttgagacaattaagatgggagttagaggagttgt 23223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 21452057 - 21451921
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||  |||||||||||| | |||||| ||||||||||    
T  21452057 attctaacttcttgctattgtgtttcttgaggacaagtaatagtttaagtttggggttgtgatgacatagcatcatatgaca-ttttggctatgttttta 21451959  T
Q  280 gtac-ttttctttgaatttaaagacaaataggatgaga 316  Q
    |||| ||||||||| |||| |||||||||| |||||||    
T  21451958 gtacgttttctttgcatttgaagacaaataagatgaga 21451921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 330
Target Start/End: Original strand, 30675360 - 30675507
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 283  Q
    |||||||||||||| || || |||||||||||| ||| ||||||||| || ||||||||||| ||||||||||||| |||||| | ||||||||||| ||    
T  30675360 taacttcttgctatagttttgcttgaggacaagcaactgtttaagttcggtgttgtgatgacagagcatcatatgacattttttgctatgtttttagaac 30675459  T
Q  284 ttttc-tttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||| |||  ||||  ||||||||| ||||| |||||||| ||||||    
T  30675460 ttttctttttcatttgtagacaaataagatgaaaattagaggagttgt 30675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 15299111 - 15299012
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||||||||| | || |||||||| ||  |||| ||||| |||| | ||||||||| ||| |||||||||||||||| |||||||||||||    
T  15299111 attctaacttcttgctatttttttgcttgaggagaatcaacgatttaaatttgcgattgtgatgatggaacatcatatgatattttaggttatgttttta 15299012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 50047113 - 50047204
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||  | |||||||||||||||| |||||||||  |||||||||||| |||| |||||||||| ||||| || ||||| ||||||    
T  50047113 tgatgacggaataccatatgatatttttggctatgtttttgatacttttctttgcatttgaagacaaataagatgaaaagtagaggagttgt 50047204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 12424097 - 12424020
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgaga 316  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||| |||| |||||||||| |||||||    
T  12424097 tgatgacagagcatcatatgata-ttttggctatgtttttagtactttttctttgcatttgaagacaaataagatgaga 12424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 31313425 - 31313553
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttt-tt 278  Q
    ||||||| ||||||||||| |||| | |||||||||| ||| |||||||||||||||||||| || ||  |||||||||||| ||| ||  |||||| ||    
T  31313425 attctaatttcttgctattttgttgcctgaggacaagcaacagtttaagtttggggttgtgacgatgg-tcatcatatgataatttaggccatgtttctt 31313523  T
Q  279 agtacttttctttgaatttaaagacaaata 308  Q
    |||  ||||||||| |||| ||| ||||||    
T  31313524 agttattttctttgcatttgaaggcaaata 31313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 26657420 - 26657499
Alignment:
Q  251 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||||||||||  |||||||||| |||||||||||| |||| |||||||||| | |||||  ||||| ||||||    
T  26657420 atcatatgatatttttgactatgtttttattacttttctttgcatttgaagacaaatatgttgagagatagaggagttgt 26657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 402
Target Start/End: Complemental strand, 50048310 - 50048239
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    |||||||||||||| |||||| ||| ||||  ||||||||||||||||||| || |||||||||| ||||||    
T  50048310 tgatggacgaaattggcaagtgcatcaaattataacaagtaataaagtagtaagtttatcgttctccacagg 50048239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 21452221 - 21452099
Alignment:
Q  34 atacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtg 133  Q
    ||||||||||||| ||||| ||| |||||||||||||  ||||| ||||||| |||| ||  ||||||||||  ||||||  |||| | || |||| |||    
T  21452221 atacgtgtatctttgaattgtatgtggttgaaagtaagagtatcctctctaaatttgatctgcttgcatggaggtggtaacctagtcaagtttgatagtg 21452122  T
Q  134 ggatgagtgacaatctgagcaaa 156  Q
    ||| || ||| ||||||||||||    
T  21452121 ggaggaatgaaaatctgagcaaa 21452099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 11770178 - 11770093
Alignment:
Q  238 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    |||||||  |||||||| ||||||||||||  |||||||||| |||| ||||||| |||| |||| ||||| ||||||| ||||||    
T  11770178 gtgatgatagagcatcacatgatatttttgtctatgtttttaatactattctttgcatttgaagataaataagatgagagttagag 11770093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 25730754 - 25730670
Alignment:
Q  239 tgatgacggagcatcatatgatatttttg-gttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||| ||||||||||||||||||||  | |||||||| |||||||||||||| |||| || ||||||| ||||||| ||||||    
T  25730754 tgatgacagagcatcatatgatatttttttgctatgtttt-agtacttttctttgcatttgaaaacaaataagatgagagttagag 25730670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 25778013 - 25777932
Alignment:
Q  240 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattag 321  Q
    |||||||||| |||||||||||||||| | |||||| ||||| |||||||||| |||| || | ||||| ||||||| ||||    
T  25778013 gatgacggagtatcatatgatattttttgctatgttcttagtgcttttctttgcatttgaaaataaataagatgagagttag 25777932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 12810256 - 12810345
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||| ||||||||  |||||||||   ||||||||||||||||||||||  ||||||||||||||| | |||||  ||||| ||||||    
T  12810256 tgatgacgaagcatcat--gatattttttactatgtttttagtacttttctttatatttaaagacaaataagttgagagatagaggagttgt 12810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 34935349 - 34935297
Alignment:
Q  255 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaat 307  Q
    ||||||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  34935349 tatgatattttaggctatgtttttagttattttctttgaatttaaagacaaat 34935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 25266504 - 25266462
Alignment:
Q  262 tttttggttatgtttttagtacttttctttgaatttaaagaca 304  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  25266504 tttttggttatgtttttagtacttttctttgcatttgaagaca 25266462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 30675235 - 30675317
Alignment:
Q  78 ttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaaatct 160  Q
    |||| |||||||||||   |||||| ||| ||||||  |||||| || ||||||||||| || ||||||||||||||||||||    
T  30675235 ttctataagtttgttccaattgcatagaagtggtaagttagttaagtttgatggtgggaagaatgacaatctgagcaaaatct 30675317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 400
Target Start/End: Complemental strand, 34522185 - 34522115
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    |||||||| |||||| |||||| ||  |||||||||||||||||||| |||| || |||||||||| ||||    
T  34522185 ttgatggaagaaattggcaagtgcaccaaatcgtaacaagtaataaaatagtaagtttatcgttctccaca 34522115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 8247840 - 8247756
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagta-cttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||| ||||||||||||| | |||||  |||||||||| || |||||||||| |||| |||||||||| ||||||| ||||||    
T  8247840 tgatgacagagcatcatatgaca-ttttgactatgtttttaataccttttctttgcatttgaagacaaataagatgagagttagag 8247756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 22624837 - 22624882
Alignment:
Q  200 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  22624837 tgttacttgaggacaagcaaccgtttaagtttggggttgtgatgac 22624882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 25965545 - 25965488
Alignment:
Q  251 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    |||||||||| |||| |||||||||||||||  ||||||||| | |||||||||||||    
T  25965545 atcatatgatgttttaggttatgtttttagttattttctttgtacttaaagacaaata 25965488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 21914895 - 21914855
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  21914895 cttgaggacaagtaacggttcaagtttggggttgtgatgac 21914855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 26101987 - 26102047
Alignment:
Q  237 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaattt 297  Q
    |||||||| |||||||||||||||||||| ||  |||||||||||  ||||||||| ||||    
T  26101987 tgtgatgatggagcatcatatgatattttaggcgatgtttttagttattttctttgcattt 26102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 17836791 - 17836853
Alignment:
Q  333 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    |||||||||||| |||||| ||  ||||| |||||||||| |||||||| || ||||||||||    
T  17836791 atggacgaaattggcaagtgcaccaaatcataacaagtaagaaagtagtaagtttatcgttct 17836853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 400
Target Start/End: Complemental strand, 23224697 - 23224619
Alignment:
Q  322 agtagttgttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    |||| ||| |||||| ||||||| |||||| | | ||||||||||||||||||| ||||| || ||||| |||| ||||    
T  23224697 agtaattggtgatgggcgaaattggcaagtgcgtcaaatcgtaacaagtaataaggtagtaagtttatcattctccaca 23224619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 30676729 - 30676667
Alignment:
Q  333 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||| ||  ||||||||  ||||||||||||||||||||||||| |  ||||||||||    
T  30676729 atggacgaacttgacaagttcaccaaatcgtaacaagtaataaagtagtaaatttatcgttct 30676667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 21912112 - 21912072
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  21912112 cttgaggacaaataacggttcaagtttggggttgtgatgac 21912072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 27682993 - 27682929
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||||||||  ||||| ||  ||| ||||||||||||||||||||| || |||| |||||    
T  27682993 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttattgttct 27682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 323
Target Start/End: Original strand, 17027400 - 17027543
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||| |||||| |||||| |||||||| ||| || |  |||||||||||||||||| || |||||||||||||| |||||||| ||||||||||    
T  17027400 attctaactttttgctaatgtgttgcttgaggataagcaatgacttaagtttggggttgtgacgagggagcatcatatgacatttttggctatgttttta 17027499  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||||||||| |||||||||||| || ||||||| ||||||    
T  17027500 gtacttttctttgcatttaaagacaattaagatgagagttagag 17027543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 24841626 - 24841754
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||||||| |||||||||||||||||||||| ||| || || || ||||||||||||||| ||||||||||||| |||||| | ||||||||||    
T  24841626 attctaacttcttgttattgtgtttcttgaggacaagcaacagtgtacgtatggggttgtgatgacagagcatcatatgacattttttgctatgttttta 24841725  T
Q  280 gtacttttctttgaatttaaagacaaata 308  Q
    ||||| ||||||| |||| ||||||||||    
T  24841726 gtactattctttgcatttgaagacaaata 24841754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 11274547 - 11274445
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagaca 304  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| | ||| ||||||||||||||||||| ||||||||||     
T  11274547 cttgaggacaagcaacggtttaagtttggggttgtgatgaaggagcatcatttgatattttttgctat-tttttagtacttttctttgcatttaaagacc 11274449  T
Q  305 aata 308  Q
    ||||    
T  11274448 aata 11274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11274788 - 11274630
Alignment:
Q  1 gccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgc 100  Q
    |||||||||| |||| | ||||||||||| ||| || ||||||||||||||| ||| |||||||||||||  |||||||||| |||| |||||  |||||    
T  11274788 gccttgaccatccccct-ggctttaggagatacctatgtgtatcttggaattgtatgtggttgaaagtaaaagtatcttctcaaagtctgttctgcttgc 11274690  T
Q  101 atggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaaatct 160  Q
    ||| ||   ||||  |||||| |||||||||||| | || ||||||| ||||||||||||    
T  11274689 atgaaagcagtaagctagttaagtctgatggtggaaagaatgacaatatgagcaaaatct 11274630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 12029493 - 12029578
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttt 265  Q
    ||||| ||||||| ||||| |||| ||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||    
T  12029493 attcttacttctttctattttgttacttgaggacaaaaaatattttaagtttggggttgtgatgaccgagcatcatatgatatttt 12029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 25594875 - 25594791
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||| |||||||||||  ||||||||| |||||||||||||||||| |||| |||| |||||||||| ||||||| ||||||    
T  25594875 tgatgacagagcatcatatattatttttggctatgtttttagtacttttatttgcatttgaagacaaataagatgagagttagag 25594791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 17382210 - 17382127
Alignment:
Q  247 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||| |||| |||||||||| ||||||| |||||| ||||||    
T  17382210 gagcatcatatgatattttttgctatgtgtttagtacttttttttgcatttgaagacaaataagatgagagttagaggagttgt 17382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 30072111 - 30072201
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||| |||||| || |||||| || |||||||| |||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  30072111 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattagaggagttgt 30072201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 22754829 - 22754958
Alignment:
Q  181 ttctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttag 280  Q
    ||||||||| ||||||||||||| |||| |||||||||||  |||||||||||| || | ||||  |||      |||| ||||| || |||||||||||    
T  22754829 ttctaactttttgctattgtgttgcttgtggacaagaaacattttaagtttgggtttcttatgatagag------atgacatttt-ggatatgtttttag 22754921  T
Q  281 tacttttctttgaatttaaagacaaataggatgagaa 317  Q
    ||| |||||||| ||||||||||||||| ||||||||    
T  22754922 tacgtttctttgcatttaaagacaaataagatgagaa 22754958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 22754635 - 22754718
Alignment:
Q  4 ttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 87  Q
    ||||||| ||| || | ||||||||||||||||||||||||||||||| |||| |||||||||||||   |||| |||||||||    
T  22754635 ttgaccaaccctattgactttaggaggtacatacgtgtatcttggaatattatatggttgaaagtaagaatatcctctctaagt 22754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 22968026 - 22967951
Alignment:
Q  238 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatg 313  Q
    |||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| || | |||||||||| ||||    
T  22968026 gtgatgacggagtatcatatgatattttaggctatgtttttagtagttttctttgcatgttaagacaaataagatg 22967951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 24841441 - 24841551
Alignment:
Q  2 ccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgca 101  Q
    ||||||||||||||| |  ||||||| | |||||| ||||||||||||||| ||| |||||||||||||  |||||||| ||||| || |||  ||||||    
T  24841441 ccttgaccagcccca-cttctttaggtgatacatatgtgtatcttggaattgtatgtggttgaaagtaagagtatcttccctaagcttcttctacttgca 24841539  T
Q  102 tggaaatggtaa 113  Q
    ||||| ||||||    
T  24841540 tggaagtggtaa 24841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 17027231 - 17027316
Alignment:
Q  20 gctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatgga 105  Q
    |||||||||||||||||| |||||||||||||| ||  ||||||||| |||  ||||||||||||| | |||||  ||||||||||    
T  17027231 gctttaggaggtacatacatgtatcttggaattgtacgtggttgaaaataagagtatcttctctaactgtgttccgcttgcatgga 17027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 330
Target Start/End: Original strand, 24517310 - 24517377
Alignment:
Q  263 ttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||| |||||||||||||| |||| ||||| |||| |||||||||| |||||||||||||| ||||||    
T  24517310 ttttagttatgtttttagttctttgctttgcatttgaagacaaataagatgagaattagaggagttgt 24517377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 11273683 - 11273748
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||| ||||| |||||| ||| |||| |||||||||||||||||||| || ||||||||||    
T  11273683 ttgatggacaaaattggcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcgttct 11273748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 23125359 - 23125219
Alignment:
Q  21 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaatt-gtatcttctctaagtttgttcatcttgcatggaaatggtaatatagt 119  Q
    ||||| |||||||||| ||||||||||||||| ||  || ||| |||||||  |||||||||||||| |||| |  ||||||||||| ||||||  ||||    
T  23125359 ctttatgaggtacatatgtgtatcttggaattgtaagtgattggaagtaataagtatcttctctaagcttgtcccgcttgcatggaagtggtaagttagt 23125260  T
Q  120 tacgtctgatggtgggatgagtgacaatctgagcaaaatct 160  Q
     | |||||   |||||| || ||||||| |||||| |||||    
T  23125259 caagtctggaagtgggaagaatgacaatatgagcacaatct 23125219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 12340187 - 12340106
Alignment:
Q  247 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||||| ||||| || ||||||||||||| ||||||||| |||| |||||||||| | ||||| |||||| ||||||    
T  12340187 gagcatcatatgacatttt-ggctatgtttttagta-ttttctttgcatttgaagacaaataaggtgagagttagaggagttgt 12340106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 22229741 - 22229818
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttt-tagtacttttctttgaatttaaagacaaataggatgaga 316  Q
    ||||||| ||||||||||||  ||||| || |||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  22229741 tgatgacagagcatcatatgtcatttt-ggctatgttttttagtacttttctttgcatttgaagacaaataagatgaga 22229818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 22644105 - 22643989
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||| |||||||||| ||| |||| |||||||| ||| |||||||||||||| || |||||||||  ||  | ||||| |||||||| | ||| ||||||    
T  22644105 attccaacttcttgccattttgttgcttgaggataagcaacggtttaagttt-ggtttgtgatgattgaataacatataatatttttaggtatattttta 22644007  T
Q  280 gtacttttctttgaattt 297  Q
    ||  ||||||||| ||||    
T  22644006 gttattttctttgtattt 22643989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 17768713 - 17768641
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    ||||||||||||||| ||||||  |  ||||||||| ||||||||||||||| || |||| ||||| ||||||    
T  17768713 ttgatggacgaaattggcaagtaaaccaaatcgtaagaagtaataaagtagtaagtttattgttctccacagg 17768641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 19571112 - 19571048
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    |||||||| ||||| |||||| ||  |||||||||||| |||||||||||| || ||||||||||    
T  19571112 tgatggactaaatttgcaagtgcaccaaatcgtaacaaataataaagtagtaagtttatcgttct 19571048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 20860470 - 20860430
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  20860470 cttgaggacaagcaacagtttaagtttggggttgtgatgac 20860430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 34133906 - 34133866
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  34133906 cttgaggacaaggaacggttcaagtttggggttgtgatgac 34133866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 11274595 - 11274548
Alignment:
Q  185 aacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttg 232  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||    
T  11274595 aacttcttgctactgtgttgcttgaggacaagtaacagtttaagtttg 11274548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 24519014 - 24518964
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 381  Q
    |||||||||||| | ||||||  || |||||||||||||||||||||||||    
T  24519014 tgatggacgaaactggcaagtgtatcaaatcgtaacaagtaataaagtagt 24518964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 24846192 - 24846262
Alignment:
Q  238 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||||   |||||||| |||| ||||||||||    
T  24846192 gtgatgacggagcatgatatgatgttttaggctatatttttagttactttctttgcatttgaagacaaata 24846262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 15205577 - 15205653
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagta-cttttctttgaatttaaagacaaataggatgag 315  Q
    ||||||| ||||||||||||||| |||||  |||||||||||||  |||| |||| ||||||| ||||||| ||||||    
T  15205577 tgatgacagagcatcatatgata-ttttgactatgtttttagtattttttatttgcatttaaatacaaataagatgag 15205653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 18451061 - 18451130
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    |||||||||||||| ||||||  |  | |||||||||||||||||||| || || |||||||||| ||||    
T  18451061 tgatggacgaaattggcaagtggaccagatcgtaacaagtaataaagttgtaagtttatcgttctccaca 18451130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 19331267 - 19331315
Alignment:
Q  22 tttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaa 70  Q
    ||||||||||||||| |||||| |||||||| ||  |||||||||||||    
T  19331267 tttaggaggtacatatgtgtattttggaattgtaagtggttgaaagtaa 19331315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 22938089 - 22938049
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  22938089 cttgaggacaaggaatggttcaagtttggggttgtgatgac 22938049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 395
Target Start/End: Complemental strand, 25682207 - 25682147
Alignment:
Q  335 ggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    |||||||||| |||||| ||  |||||||||||||||||||| |||| |  ||||||||||    
T  25682207 ggacgaaattggcaagtgcactaaatcgtaacaagtaataaaatagtaattttatcgttct 25682147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 26070404 - 26070475
Alignment:
Q  236 ttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    |||| |||| ||| ||||||||||| ||||||| ||||||||||||  ||||||||| |||| ||| ||||||    
T  26070404 ttgtaatgatggaacatcatatgat-tttttggctatgtttttagttattttctttgcattttaaggcaaata 26070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 323
Target Start/End: Complemental strand, 28278664 - 28278522
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||||||||||||||||| |||||||||||| |||  ||||||||| ||||||||||||| |||||||||||||||||||| | |||| |||||    
T  28278664 attctaacttcttgctattgtgttgcttgaggacaagcaacactttaagttttgggttgtgatgacagagcatcatatgatattttttgctatg-tttta 28278566  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||||||||| |||| ||| |||||| || |||| ||||||    
T  28278565 gtacttttctttgcatttgaaggcaaataagaagagagttagag 28278522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 21505323 - 21505231
Alignment:
Q  238 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||||||    
T  21505323 gtgatgacggagcatcatatgatatttttggctatgtttttagtatttttctttgcatttgaagacaaataagatgagagttagagtagttgt 21505231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 39730324 - 39730448
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 283  Q
    ||||||||||||||| |||| |||||||||||  |||  ||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||      
T  39730324 taacttcttgctattttgttgcttgaggacaaataacattttaagtttggggttgtgatggcggagcatcatataatattttaggctatgtttttagtta 39730423  T
Q  284 ttttctttgaatttaaagacaaata 308  Q
    ||||||||  | || ||||||||||    
T  39730424 ttttctttataattgaagacaaata 39730448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 31449830 - 31449955
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||| ||||||||||| | |||| |||||||||||| ||| ||||||||||||||||||||||| |||| ||| |||||||||||  | ||||||||||    
T  31449830 attctgacttcttgctaatttgttacttgaggacaagcaacagtttaagtttggggttgtgatgatggagtatcttatgatattttaagctatgttttta 31449929  T
Q  280 gtacttttctttgaatttaaagacaa 305  Q
    ||  |||| |||| |||| |||||||    
T  31449930 gttattttatttgcatttgaagacaa 31449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 32276752 - 32276638
Alignment:
Q  183 ctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 282  Q
    |||| |||||| |||| |||| | | |||||||||||| ||||||||||||||||||||||| ||| ||||||||| || |||||| ||||||||||||     
T  32276752 ctaagttcttgttattttgttgcgtaaggacaagaaaccgtttaagtttggggttgtgatgaaggaacatcatatggtacttttggatatgtttttagtt 32276653  T
Q  283 cttttctttgaattt 297  Q
     ||||||||| ||||    
T  32276652 attttctttgcattt 32276638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 32619586 - 32619643
Alignment:
Q  251 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||    
T  32619586 atcatatgatatttttggctatatttttagtacttttctttgcatttgaagacaaata 32619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 17415588 - 17415496
Alignment:
Q  21 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaa 113  Q
    ||||||||||||||||||||||||||||||||     | |||||||||||  ||||||| |||||||||||||  ||||| ||||| ||||||    
T  17415588 ctttaggaggtacatacgtgtatcttggaattgggaatagttgaaagtaagagtatcttttctaagtttgttccacttgcgtggaagtggtaa 17415496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 28278823 - 28278704
Alignment:
Q  36 acgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtggg 135  Q
    ||||||||||||||||| ||| ||||| |||||||  ||||||||||||| ||||||   ||||||||||| ||||||  |||| |  |||||| |||||    
T  28278823 acgtgtatcttggaattctatgtggttaaaagtaagagtatcttctctaactttgtttcgcttgcatggaagtggtaaactagtcaaatctgatagtggg 28278724  T
Q  136 atgagtgacaatctgagcaaa 156  Q
    | || ||||||| ||||||||    
T  28278723 a-gaatgacaatatgagcaaa 28278704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 31000669 - 31000597
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    ||||||||||||||| |||||| ||| |||| |||||||||||||||||||| || ||||| |||| ||||||    
T  31000669 ttgatggacgaaatttgcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcattctccacagg 31000597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 35707735 - 35707826
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||| ||||||||||||| | |||||  |||||||||||||| ||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  35707735 tgatgacagagcatcatatgaca-ttttgactatgtttttagtactttttctttgtatttgaagacaaataagatgagagttagagaagttgt 35707826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 25473969 - 25474060
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||| ||||||||||||| | |||||| |||||||||||||| |||| |||  |||| |||||||||| ||||||| |||||| ||||||    
T  25473969 tgatgacagagcatcatatgaca-ttttggctatgtttttagtacattttattttcatttgaagacaaataagatgagagttagaggagttgt 25474060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 18236485 - 18236418
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 306  Q
    |||||||||||||||||||||||||||  | ||||||||||||  ||||||||| |||| ||| ||||    
T  18236485 tgatgacggagcatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaa 18236418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 1733042 - 1733123
Alignment:
Q  248 agcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||||| ||||| | ||||||||||||||||||| |||  |||| |||||||||  ||||||| |||||| ||||||    
T  1733042 agcatcatatgacattttag-ttatgtttttagtactttttttttcatttgaagacaaatgagatgagagttagaggagttgt 1733123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 29769610 - 29769660
Alignment:
Q  228 gtttggggttgtgatgacggagcatcatatgatatttttggttatgttttt 278  Q
    |||||||||| ||||||||||||||||||| ||||||| || |||||||||    
T  29769610 gtttggggttatgatgacggagcatcatataatattttaggctatgttttt 29769660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 27918224 - 27918127
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttt 277  Q
    ||||||||||||| ||| ||| ||  |||| |||||| |||  ||||||||||||| |||||||| |||  | |||||||||||||| | ||||||||    
T  27918224 attctaacttcttactaatgttttgtttgatgacaagcaacaatttaagtttggggatgtgatgatggaataacatatgatatttttagctatgtttt 27918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 22388997 - 22388934
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 244  Q
    ||||||||||||||||||| | |||||||| |||||| |||| | ||||||||||||||| ||||    
T  22388997 attctaacttcttgctatttt-tttcttgatgacaagcaacgatataagtttggggttgtaatga 22388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 1504352 - 1504312
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1504352 cttgaggacaaggaatggttcaagtttggggttgtgatgac 1504312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 20379417 - 20379377
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  20379417 cttgaggacaagcaacagtctaagtttggggttgtgatgac 20379377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 25873169 - 25873209
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  25873169 cttgaggacaaggaatggttcaagtttggggttgtgatgac 25873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 25886157 - 25886197
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  25886157 cttgaggacaagcaacaatttaagtttggggttgtgatgac 25886197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 400
Target Start/End: Original strand, 28455128 - 28455196
Alignment:
Q  332 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    ||||||||||||| |||||| ||  ||||| ||||||||| ||||||||| || |||| ||||| ||||    
T  28455128 gatggacgaaattggcaagtacaccaaatcataacaagtattaaagtagtaagtttatggttctccaca 28455196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 31914099 - 31914047
Alignment:
Q  256 atgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    |||| |||||| | ||||||||||||| ||||||||| |||| ||||||||||    
T  31914099 atgacattttttgctatgtttttagtatttttctttgcatttgaagacaaata 31914047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 45456266 - 45456306
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  45456266 cttgaggacaaggaatggttcaagtttggggttgtgatgac 45456306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 314
Target Start/End: Complemental strand, 1676537 - 1676403
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||||||| |||||| ||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||     
T  1676537 attctaacttcttgctactgtgttgcttgaagacatgcaacagtttaagtttggggttgtgatgacgaagcatcatatgacatttttggttatatttttt 1676438  T
Q  280 gtacttttctttgaatttaaagacaaataggatga 314  Q
    ||||||||||||  |||| |||||||||| |||||    
T  1676437 gtacttttctttacatttgaagacaaataagatga 1676403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 314
Target Start/End: Complemental strand, 1683065 - 1682931
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||||||| |||||| ||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||     
T  1683065 attctaacttcttgctactgtgttgcttgaagacatgcaacagtttaagtttggggttgtgatgacgaagcatcatatgacatttttggttatatttttt 1682966  T
Q  280 gtacttttctttgaatttaaagacaaataggatga 314  Q
    ||||||||||||  |||| |||||||||| |||||    
T  1682965 gtacttttctttacatttgaagacaaataagatga 1682931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1697004 - 1696893
Alignment:
Q  1 gccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgc 100  Q
    ||||||||||||||||  |||||||| ||||||||| ||||||||||||||| ||| |||||||||||||  ||||| |||||||||||||||  |||||    
T  1697004 gccttgaccagccccactggctttagaaggtacatatgtgtatcttggaattgtatgtggttgaaagtaaaagtatcctctctaagtttgttctgcttgc 1696905  T
Q  101 atggaaatggta 112  Q
    |||||| |||||    
T  1696904 atggaagtggta 1696893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 1696809 - 1696675
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||||||| |||||| ||||| || ||| ||| ||||||||||| |||||||||||   |||||||||||| |||||||| ||  | ||||    
T  1696809 attctaacttcttgctactgtgttgcttgaagataagcaacagtttaagtttgaggttgtgatgataaagcatcatatgacatttttggcta--tattta 1696712  T
Q  280 gtacttttctttgaatttaaagacaaataggatgaga 316  Q
    |||||||| |||  |||| |||||||||| |||||||    
T  1696711 gtacttttatttacatttgaagacaaataagatgaga 1696675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 15192137 - 15192212
Alignment:
Q  241 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 316  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||    
T  15192137 atgacagagcatcatatgacattttttgttatgtttttcgtacttttctttgcatttgaagacaaataagatgaga 15192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 34850752 - 34850839
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttg 267  Q
    |||||||||||||| |||||||||||||| | ||||| ||| |||||| ||||| |||| |||||| || |||||||| |||||||||    
T  34850752 attctaacttcttgttattgtgtttcttgcgaacaagcaacagtttaaatttggagttgcgatgacagaacatcatataatatttttg 34850839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 34864458 - 34864383
Alignment:
Q  255 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||||| ||| | | |||||| ||||||    
T  34864458 tatgatattttttgttatgtttttagtacttttctttgtatttgaagacaaataagataaaagttagaggagttgt 34864383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 12111510 - 12111446
Alignment:
Q  242 tgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 306  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||| ||||||||    
T  12111510 tgacagagcatcatatgacattttttgttatgtttttagtacttttatttgcatttgaagacaaa 12111446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 18897921 - 18897992
Alignment:
Q  237 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||||| |||| |||||||||| |||||||| | |||||||| |||||||||||| |||| ||||||||||    
T  18897921 tgtgatggcggatcatcatatgacatttttggctgtgtttttactacttttctttgcatttgaagacaaata 18897992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 5906905 - 5906819
Alignment:
Q  238 gtgatgacggagcatcatatgatat-ttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||||| | ||||||||||||| |||| | |||||||||||||||||| |||| |||| |||||||| | ||||||| ||||||    
T  5906905 gtgatgacgaaacatcatatgatatatttttgctatgtttttagtacttttatttgcatttgaagacaaacaagatgagagttagag 5906819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 10576371 - 10576437
Alignment:
Q  225 taagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 291  Q
    |||||||||||||||||||| |||| ||||||||||||||| |  ||||||||||||  ||||||||    
T  10576371 taagtttggggttgtgatgatggagtatcatatgatattttagactatgtttttagttattttcttt 10576437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 401
Target Start/End: Original strand, 47023552 - 47023622
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacag 401  Q
    ||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| || ||||| ||||||||||    
T  47023552 tgatgaacgaaattggcaagtacatcaaatcgtaacaagtaataaggtagtaagtttatctttcttcacag 47023622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 20718004 - 20717941
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgtt 393  Q
    ||||| ||||||||| |||||| ||  ||||||||||||||||||||||||| || ||||||||    
T  20718004 ttgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgtt 20717941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 9288142 - 9288204
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaag 301  Q
    |||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| || |||||    
T  9288142 tgatgaaggagcaccatatgatattttaggatatgtttttagtagttttctttgcatataaag 9288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 12840697 - 12840761
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttc 394  Q
    ||||||||||||||| |||||| ||   |||||||||||||| ||||||||| || |||||||||    
T  12840697 ttgatggacgaaattggcaagtgcactgaatcgtaacaagtattaaagtagtaagtttatcgttc 12840761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 22220009 - 22219945
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||||||||  ||||| ||  ||||| ||||||||||||||||||| || ||||||||||    
T  22220009 tgatggacgaaattgacaagtgcactaaatcataacaagtaataaagtagtaagtttatcgttct 22219945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 25315414 - 25315323
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgttttt-agtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||| ||||||||||||| ||||| | |||||||||| |||||||||||||  |||| |||| ||||| |||||||  ||||| ||||||    
T  25315414 tgatgaccgagcatcatatgacattttag-ttatgttttttagtacttttctttacatttgaagataaataagatgagagatagaggagttgt 25315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 24580047 - 24580004
Alignment:
Q  357 aaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    ||||||||||||||||||||||||| || |||||||||| ||||    
T  24580047 aaatcgtaacaagtaataaagtagttagtttatcgttctccaca 24580004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 25050227 - 25050164
Alignment:
Q  260 tatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||||| ||||||||||||| |||| |||| |||| |||||||||| ||||| | ||||||    
T  25050227 tatttttggctatgtttttagtatttttatttgtatttgaagacaaataagatgaaagttagag 25050164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 30797754 - 30797703
Alignment:
Q  341 aattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 392  Q
    |||| |||||| ||| ||||||||||||||||||||||||| || |||||||    
T  30797754 aattggcaagtgcatcaaatcgtaacaagtaataaagtagtaagtttatcgt 30797703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 10320394 - 10320350
Alignment:
Q  247 gagcatcatatgatatttttggttatgtttttagtacttttcttt 291  Q
    ||||||||||||| |||||| | ||||||||||||| ||||||||    
T  10320394 gagcatcatatgacatttttcgctatgtttttagtaattttcttt 10320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 17339995 - 17339927
Alignment:
Q  240 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||| |||||||||||||||||||| || |||||||||| |  |||| |||  |||||||| ||||||    
T  17339995 gatgatggagcatcatatgatattttaggctatgtttttaattattttatttacatttaaaggcaaata 17339927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 19826667 - 19826707
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  19826667 cttgaggacaaggaatggttcaagtttggggttgtgatgac 19826707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 21017750 - 21017899
Alignment:
Q  181 ttctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgata-tttttggttatgttttta 279  Q
    ||||||||||||| ||||||||| ||| |||||||| |||| |||||||||| ||||||||| || ||||||||||||||| ||||| ||||||||||||    
T  21017750 ttctaacttcttgttattgtgttgcttaaggacaagcaacgatttaagtttgaggttgtgataacagagcatcatatgatatttttttgttatgttttta 21017849  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttg 329  Q
    ||| ||||||||| |||| |||| ||||| ||||||| |||||| |||||    
T  21017850 gtatttttctttgcatttgaagaaaaataagatgagagttagaggagttg 21017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 13911138 - 13911263
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||   ||||||||||    
T  13911138 attctaacttattgctattgtgttactttaggacaagcaacggtttaagtttagggttgtgatgacggagaatcaaatgatatttttttctatgttttta 13911237  T
Q  280 gtacttttctttgaatttaaagacaa 305  Q
    ||| ||||||||| |||| |||||||    
T  13911238 gtaattttctttgtatttgaagacaa 13911263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 25919647 - 25919564
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattaga 322  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||    
T  25919647 tgatgatggagcatcatatgatatttctggttatgtttttagtacatttctttgaatttgaagacaaataagatgagagttaga 25919564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 8402792 - 8402693
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||| |||| ||| ||| |||| |||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||    
T  8402792 attctatcttcctgcaattttgttgcttgaggaaaagcaacgatttaagtttggggttgtgatgacagagcatcatatgatattttagactatgttttta 8402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 17637035 - 17637126
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||||||||||||| |||||||| ||||||| || |||||||||||| | ||||||||||||| ||| ||||| |||| ||||||    
T  17637035 tgatgacggagcatcatatgacatttttggctatgtttatattacttttctttgtaattaaagacaaataagataagaataagaggagttgt 17637126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 5632732 - 5632668
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 244  Q
    ||||||||||||||| ||| |||| |||| ||||||| |||||||||||||||||||||||||||    
T  5632732 attctaacttcttgccattttgttgcttggggacaagcaacggtttaagtttggggttgtgatga 5632668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 11521039 - 11521090
Alignment:
Q  206 ttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatat 257  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  11521039 ttgaggacaagcaacggtttaagtttggcgttgtgatgacagagcatcatat 11521090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 5632907 - 5632859
Alignment:
Q  21 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagta 69  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  5632907 ctttaggaggtacatacgtgtatcttggaattgtaagtggttgaaagta 5632859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 33914714 - 33914654
Alignment:
Q  270 tatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||| ||| || ||||||    
T  33914714 tatgtttttagtacttttctttgcatttcaagacaaataagatgagagttataggagttgt 33914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 12573231 - 12573305
Alignment:
Q  248 agcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 322  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| |||  |||||||||| ||||||| |||||    
T  12573231 agcatcatatgacatttt-ggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttaga 12573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 13549695 - 13549769
Alignment:
Q  248 agcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 322  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| |||  |||||||||| ||||||| |||||    
T  13549695 agcatcatatgacatttt-ggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttaga 13549769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 16970177 - 16970241
Alignment:
Q  243 gacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||| |||| || |||||||    
T  16970177 gacggagca-catatgatatttttgactatgtttttagtgcttttctttgtatttgaacacaaata 16970241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 19219394 - 19219317
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 316  Q
    |||||||| |||||||||||||| |||| | | ||||||||||| |||||||||  ||| |||| ||||| |||||||    
T  19219394 tgatgacgaagcatcatatgatacttttagctgtgtttttagtatttttctttgcttttgaagataaataagatgaga 19219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 10343064 - 10343000
Alignment:
Q  336 gacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    |||||||||||||||| ||  |||||||||| ||||||||| |||| || |||||||||| ||||    
T  10343064 gacgaaattagcaagtgcacaaaatcgtaacgagtaataaaatagtaagtttatcgttctccaca 10343000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 10883984 - 10884024
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  10883984 cttgaggacaaggaacggttcaagtttggggttgtgatgac 10884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11520816 - 11520971
Alignment:
Q  1 gccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgc 100  Q
    ||||||||||| ||||   | ||||| || |||||||||||||||| ||||| | | |||||||||||||  |||||  |||||||||||  |   |||     
T  11520816 gccttgaccagtcccactagatttagaagatacatacgtgtatctttgaattgtttgtggttgaaagtaagagtatccactctaagtttgaactggttgt 11520915  T
Q  101 atggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaa 156  Q
    |||||  ||||||  |||| | || |||| |||||| || ||||||||||||||||    
T  11520916 atggatgtggtaagctagtcaagtttgatagtgggaggaatgacaatctgagcaaa 11520971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 18065761 - 18065828
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 306  Q
    ||||||||| |||| || ||| |||||||| ||||||||| ||| | ||||||| |||||||||||||    
T  18065761 tgatgacggggcattatgtgacatttttggctatgtttttggtaatattctttgcatttaaagacaaa 18065828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 1475463 - 1475374
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagtt 328  Q
    |||||||  |||||||||||| ||||| || |||||||||||||| ||||||||| |||| ||| | |||| ||||||| |||||| ||||    
T  1475463 tgatgacatagcatcatatgacatttt-ggctatgtttttagtactttttctttgcatttgaagtctaataagatgagagttagaggagtt 1475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 31477771 - 31477705
Alignment:
Q  242 tgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||| |||||||  |||||| || || ||||||||||||  ||||||||| |||||||||||||||    
T  31477771 tgacgaagcatcacttgatatattaggatatgtttttagttattttctttgtatttaaagacaaata 31477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 33913400 - 33913461
Alignment:
Q  334 tggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||||| |||||| ||  |||| |||||||||||||||||||| |  ||||||||||    
T  33913400 tggacgaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaaatttatcgttct 33913461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 16223612 - 16223572
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  16223612 cttgaggacaagcaacaatttaagtttggggttgtgatgac 16223572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 18541774 - 18541814
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  18541774 cttgaggacaaggaatggttcaagtttggggttgtgatgac 18541814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 31283869 - 31283909
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  31283869 cttgaggacaagcaatagtttaagtttggggttgtgatgac 31283909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 47053927 - 47053967
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  47053927 cttgaggacaaggaatggttcaagtttggggttgtgatgac 47053967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 7494584 - 7494720
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||| |||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||  |||||||| ||||||||||||| |||  |||||    
T  7494584 attctgacttcttgctattgtgttgcttgaggacaagcaacagtttaagtttgtggttgtgatgaatgagcatcacatgatatttttggctattctttta 7494683  T
Q  280 gtacttttctttgaatttaaagacaaataggatgaga 316  Q
    ||||||||||||| | || |||||||| ||| |||||    
T  7494684 gtacttttctttgcacttgaagacaaacaggttgaga 7494720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 330
Target Start/End: Complemental strand, 20471049 - 20470902
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaag-aaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 282  Q
    |||||||||||||| ||||| |||||||||||  ||||  |||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||||||    
T  20471049 taacttcttgctatcgtgttgcttgaggacaaacaaacaatttaagtttggggttgtgatgacgaagcatcatatgaattttttggctttgtttttagta 20470950  T
Q  283 cttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||| |||  || | |||||||||| ||||| |||||||| ||||||    
T  20470949 cttttatttatatgtgaagacaaataagatgataattagaggagttgt 20470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 21471674 - 21471813
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 283  Q
    |||||||| |||||||| || |||||||||||  ||| |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  21471674 taacttctagctattgtattgcttgaggacaatcaacagtttaagtttggggttgtgatgacagagcatcatatgcca-ttttggttatgtttttagtac 21471772  T
Q  284 -ttttctttgaatttaaagacaaataggatgagaattagag 323  Q
     ||||| ||| |||| |||||||||| ||||| | ||||||    
T  21471773 tttttccttgcatttgaagacaaataagatgatatttagag 21471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 21471473 - 21471628
Alignment:
Q  1 gccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgc 100  Q
    ||||||||||||||||| || ||||||||  |||||| |||||||||||||| ||  |||||||||||||  ||||| |||||||||||| ||  |||||    
T  21471473 gccttgaccagccccattggatttaggagacacatacatgtatcttggaattgtacgtggttgaaagtaagagtatcctctctaagtttgatccacttgc 21471572  T
Q  101 atggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaa 156  Q
    ||| |  ||||||  |||| | || |||| |||||| || ||||||||||||||||    
T  21471573 atgaaggtggtaagctagtcaagtttgatagtgggaggaatgacaatctgagcaaa 21471628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 29544451 - 29544542
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||| ||||||||||||||||||||||| |||||||||| || ||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  29544451 tgatgaaggagcatcatatgatatttttggctatgtttttattaattttctttgcatttgaagacaaataagatgagagttagaggagttgt 29544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 9761646 - 9761537
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||| ||||||||| |  |||||||||||| |||  ||||| ||||||||||||||||| ||||||||||||| | |||||| || |||||||    
T  9761646 attctaacttcatgctattgtctagcttgaggacaagcaacaatttaa-tttggggttgtgatgacagagcatcatatgaca-ttttggctacgttttta 9761549  T
Q  280 gtacttttcttt 291  Q
    ||||||||||||    
T  9761548 gtacttttcttt 9761537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 3269220 - 3269123
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagt 281  Q
    |||||||||| |||| |||| |  |||||||| |||||||||||||||| |||||||||||| |||| |||||||||| ||| || ||||||||||||    
T  3269220 taacttcttgttattttgttgcgagaggacaataaacggtttaagtttgaggttgtgatgaccgagcttcatatgatactttaggctatgtttttagt 3269123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 2632619 - 2632523
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgagaattagagtagttgttgatg 335  Q
    ||||||| ||| ||| ||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||| |||||| |||||| |||||||||||    
T  2632619 tgatgacagagtatcgtatgatatttttg-ttatgtttatagtactttttctttgcatttaaagactaatagtatgagagttagaggagttgttgatg 2632523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 7142030 - 7142099
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||||| ||||||||||||| |||||||| |||||||||| || ||||||||| |||||||||||||||    
T  7142030 tgatgacagagcatcatatgacatttttggctatgtttttaatagttttctttgcatttaaagacaaata 7142099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 5722098 - 5722164
Alignment:
Q  21 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 87  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||| ||  |||||||||||||||    
T  5722098 ctttaggagatacatacgtgtatcttggaattgtaagtggttgaaagcaagagtatcttctctaagt 5722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 9802057 - 9801996
Alignment:
Q  229 tttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 291  Q
    ||||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||||    
T  9802057 tttggggttgtgatgacagagcatcatatgaca-ttttggctacgtttttagtacttttcttt 9801996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 400
Target Start/End: Original strand, 21544679 - 21544749
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 400  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||||||||||| || ||| |||||| ||||    
T  21544679 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttaccgttctccaca 21544749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 2353421 - 2353357
Alignment:
Q  241 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaa 305  Q
    ||||||||||||| ||||||||||| || ||||||||||||  ||||||||| |||| |||||||    
T  2353421 atgacggagcatcgtatgatattttaggctatgtttttagttgttttctttgcatttgaagacaa 2353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 20446171 - 20446262
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||| ||||| ||||||||||||| | | ||||||||| ||||||| ||||| |||| ||||||| || |||||||||||||| ||||||    
T  20446171 tgatgacagagcaacatatgatattttagct-atgtttttaatactttttctttgcatttgaagacaattaagatgagaattagaggagttgt 20446262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 23124833 - 23124924
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgtt 331  Q
    |||||| |||||||||| ||| ||||||   |||||||||||||| |||||||  |||| |||||||||| ||||||| |||||| |||||||    
T  23124833 tgatgatggagcatcatctgacattttttactatgtttttagtac-tttctttacatttgaagacaaataagatgagatttagaggagttgtt 23124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 402
Target Start/End: Complemental strand, 7494555 - 7494484
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    |||||||||||||| |||||| ||  |||||||||||||||||||| |||| || ||||| |||| ||||||    
T  7494555 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaattagtaagtttatcattctccacagg 7494484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 16536811 - 16536689
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 283  Q
    |||||||||  |||| |||| |||||||||||  |||  |||||||||  ||||||||||| ||| |||||| |||||||||  |||||| |||| ||      
T  16536811 taacttctttttattttgttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatctgatattttaagttatg-ttttggtta 16536713  T
Q  284 ttttctttgaatttaaagacaaat 307  Q
    ||||||||| |||| |||||||||    
T  16536712 ttttctttgcatttgaagacaaat 16536689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 16577513 - 16577387
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||||||  |||| | || |||||||||||  |||  |||||||||  ||||||||||| ||| ||||||||||||||||  | ||||||||      
T  16577513 attctaacttctttttatttttttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatatgatattttaaggtatgttttgg 16577414  T
Q  280 gtacttttctttgaatttaaagacaaat 307  Q
     || ||||||||| |||| |||||||||    
T  16577413 cta-ttttctttgcatttgaagacaaat 16577387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 16588149 - 16588275
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||||||  |||| | || |||||||||||  |||  |||||||||  ||||||||||| ||| ||||||||||||||||  | ||||||||      
T  16588149 attctaacttctttttatttttttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatatgatattttaaggtatgttttgg 16588248  T
Q  280 gtacttttctttgaatttaaagacaaat 307  Q
     || ||||||||| |||| |||||||||    
T  16588249 cta-ttttctttgcatttgaagacaaat 16588275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 16628851 - 16628973
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 283  Q
    |||||||||  |||| |||| |||||||||||  |||  |||||||||  ||||||||||| ||| |||||| |||||||||  |||||| |||| ||      
T  16628851 taacttctttttattttgttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatctgatattttaagttatg-ttttggtta 16628949  T
Q  284 ttttctttgaatttaaagacaaat 307  Q
    ||||||||| |||| |||||||||    
T  16628950 ttttctttgcatttgaagacaaat 16628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 1074341 - 1074422
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatat 262  Q
    |||||| |||||||||||| ||||  ||| ||||||| |||| ||||||||| |||||||||||| | ||||| |||||||||    
T  1074341 attctaccttcttgctattttgttgtttggggacaagcaacgatttaagtttagggttgtgatgatgtagcat-atatgatat 1074422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 7956058 - 7956119
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtga 241  Q
    |||||| | ||||| |||| |||| ||| ||||||||||||| |||||||||||||||||||    
T  7956058 attctaccgtcttgatattttgttgcttcaggacaagaaacgatttaagtttggggttgtga 7956119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 18496498 - 18496555
Alignment:
Q  240 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaattt 297  Q
    ||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| ||||    
T  18496498 gatgatggagcaccatatgatattttaggctatgtttttagtagttttctttgcattt 18496555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 21545984 - 21545929
Alignment:
Q  239 tgatgacggagcat---catatgatatttttggttatgtttttagtacttttcttt 291  Q
    ||||||||||||||   |||||||||||||||  ||||||||||||||||||||||    
T  21545984 tgatgacggagcatgatcatatgatatttttgactatgtttttagtacttttcttt 21545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 7143639 - 7143571
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttca 398  Q
    |||||||| ||||||  ||||| ||  ||||||||||||||||||||||||  || |||||||||||||    
T  7143639 ttgatggatgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagcaagtttatcgttcttca 7143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 7776350 - 7776422
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    |||||| || |||||||||||| ||  ||||| |||||||||| |||||||| || |||||||||| ||||||    
T  7776350 ttgatgaacaaaattagcaagtgcaccaaatcttaacaagtaacaaagtagtaagtttatcgttctccacagg 7776422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 13287676 - 13287716
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  13287676 cttgaggacaagaaacagtctaagtttggggttgtgatgac 13287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 26137074 - 26137034
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  26137074 cttgaggacaaggaacggttcaagtttggggttgtgatgac 26137034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 9071451 - 9071392
Alignment:
Q  336 gacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    |||||||||||||| | ||| |||||||||||||||| |||||||| || || |||||||    
T  9071451 gacgaaattagcaactgcatcaaatcgtaacaagtaaaaaagtagtaagtttttcgttct 9071392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 18494555 - 18494626
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    |||| ||||||||| |||||| ||  ||||||||||||||||||| ||||| || |||| ||||| ||||||    
T  18494555 tgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaggtagtaagtttattgttctccacagg 18494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 381
Target Start/End: Complemental strand, 21473094 - 21473039
Alignment:
Q  326 gttgttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 381  Q
    |||||||||||||||||||| ||||| ||  ||||| |||||||| ||||||||||    
T  21473094 gttgttgatggacgaaattatcaagtgcaccaaatcataacaagttataaagtagt 21473039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 7815267 - 7815332
Alignment:
Q  251 atcatatgatatttttggttatgtttttagtacttttct-ttgaatttaaagacaaataggatgaga 316  Q
    ||||||||||||||| ||||||||||||||||||||| | ||| |||| |||| ||||| |||||||    
T  7815267 atcatatgatatttt-ggttatgtttttagtacttttttgttgcatttgaagataaataagatgaga 7815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 22532830 - 22532784
Alignment:
Q  235 gttgtgatgacggagcatcatatgatatttttggttatgtttttagt 281  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||||    
T  22532830 gttgtaatgatggagcatcatatgatattttaggctatgtttttagt 22532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 7152157 - 7152116
Alignment:
Q  357 aaatcgtaacaagtaataaagtagtcagattatcgttcttca 398  Q
    ||||||||||||||||||||||||| || |||||||| ||||    
T  7152157 aaatcgtaacaagtaataaagtagtaagtttatcgtttttca 7152116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 392
Target Start/End: Complemental strand, 14074547 - 14074486
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 392  Q
    |||||||||||| | | |||| ||  ||||||||||||||||||||||||| || |||||||    
T  14074547 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgt 14074486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 392
Target Start/End: Complemental strand, 14384575 - 14384514
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 392  Q
    |||||||||||| | | |||| ||  ||||||||||||||||||||||||| || |||||||    
T  14384575 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgt 14384514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 2506786 - 2506826
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  2506786 cttgaggacaagcaactatttaagtttggggttgtgatgac 2506826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 4596958 - 4596918
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  4596958 cttgaggacaaggaatggttcaagtttggggttgtgatgac 4596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 15170730 - 15170770
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||| ||||| ||||||||||||||||||    
T  15170730 cttgaggacaagcaacagtttatgtttggggttgtgatgac 15170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 19154949 - 19154909
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  19154949 cttgaggacaagcaacagattaagtttggggttgtgatgac 19154909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 20754348 - 20754308
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  20754348 cttgaggacaagcaacagattaagtttggggttgtgatgac 20754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 39270239 - 39270279
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  39270239 cttgaggacaagcaacaatttaagtttggggttgtgatgac 39270279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 330
Target Start/End: Original strand, 24120107 - 24120254
Alignment:
Q  183 ctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 282  Q
    ||||||| |||||||||||||  ||||||||||| |||  ||||  || ||||||||||||||| | ||||||||||||||||| | |||||||||||||    
T  24120107 ctaacttattgctattgtgttgattgaggacaagcaacattttattttgggggttgtgatgacgaatcatcatatgatattttttgctatgtttttagta 24120206  T
Q  283 cttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||||| |||| |||| ||||| ||||||| |||||| ||||||    
T  24120207 cttttctttgcatttgaagagaaataagatgagagttagaggagttgt 24120254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 180 - 330
Target Start/End: Complemental strand, 16052519 - 16052369
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||||||||||||||||||| | |   |||||||   |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16052519 attctaacttcttgctattgtgctgcaaaaggacaaacgagagtttaagtttagggttgtgatgacggagcatcatatgatatttttggctatgttttta 16052420  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||| |||| |||| | ||||||||  |||||| |||||| ||||||    
T  16052419 gtacttttatttgcatttgaggacaaataaaatgagagttagaggagttgt 16052369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 22894768 - 22894648
Alignment:
Q  188 ttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtactttt 287  Q
    |||||||||||||||||||||||||||||  || ||||||||||| | |||||||||| ||||||||||||| |||||| | ||||||||||||||||||    
T  22894768 ttcttgctattgtgtttcttgaggacaagggacagtttaagtttgagattgtgatgacagagcatcatatgacatttttaggtatgtttttagtactttt 22894669  T
Q  288 ctttgaatttaaagacaaata 308  Q
    ||| | |||| ||| ||||||    
T  22894668 cttcgcatttgaagccaaata 22894648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 16052716 - 16052557
Alignment:
Q  1 gccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgc 100  Q
    |||||||||| |||||   ||||||||||||||||||| ||||||||||||| ||| |||||||||||||   |||  ||| ||||| |||||| |||||    
T  16052716 gccttgaccaaccccactagctttaggaggtacatacgcgtatcttggaattgtatgtggttgaaagtaagaatatactctttaagtctgttcagcttgc 16052617  T
Q  101 atggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaaatct 160  Q
    || ||| ||||||  |||||| || ||||| ||||| ||||| |||||||||| ||||||    
T  16052616 atagaagtggtaagctagttaagtttgatgatgggaagagtggcaatctgagccaaatct 16052557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 28252571 - 28252481
Alignment:
Q  232 ggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattaga 322  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| || | ||||||||||||||| ||||||| |||||    
T  28252571 ggggttgtgatgaaggagcatcatatgatattttttgttatgtttttaatacttttattcgtatttaaagacaaataagatgagagttaga 28252481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 180 - 330
Target Start/End: Complemental strand, 28901582 - 28901432
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    ||||||||||||||||| |||||| |||||| ||||| |||| |||||||||   ||||||||   |||||||||||||| |||||||| |||| |||||    
T  28901582 attctaacttcttgctactgtgttgcttgagaacaagcaacgatttaagtttctagttgtgatattggagcatcatatgaaatttttggctatgctttta 28901483  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
     |||||||||||| |||| || ||||||| | |||||  ||||| ||||||    
T  28901482 atacttttctttgcatttgaatacaaataagttgagagatagaggagttgt 28901432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 10866861 - 10867011
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 279  Q
    |||||| ||| |||||||| |||  |||||||||||  || ||||||| |||||||||||||||| ||| ||||||||||||||||| | |||| |||||    
T  10866861 attctatctttttgctattttgtagcttgaggacaaacaaaggtttaattttggggttgtgatgatggaacatcatatgatattttttggtatgatttta 10866960  T
Q  280 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||  |||||||||||||  ||| |||||| || |  | |||||||||||||    
T  10866961 gttattttctttgaattcgaaggcaaataagaggtcatttagagtagttgt 10867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 222 - 330
Target Start/End: Complemental strand, 13082137 - 13082029
Alignment:
Q  222 gtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaatta 320  Q
    ||||||||||||||||||||||||  | |||||||||| | ||||| ||||||||||||||| ||||||||| |||| |||||||||| ||||||| |||    
T  13082137 gtttaagtttggggttgtgatgacaaaacatcatatgaca-ttttgattatgtttttagtactttttctttgcatttgaagacaaataagatgagagtta 13082039  T
Q  321 gagtagttgt 330  Q
    ||| ||||||    
T  13082038 gaggagttgt 13082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 24119925 - 24120066
Alignment:
Q  19 ggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatag 118  Q
    |||||| | ||||||||||||||||||||||||| ||| | ||| |||||||  ||||||||||| ||| |||||  ||||||||||| ||||||  |||    
T  24119925 ggctttggcaggtacatacgtgtatcttggaattatatgtcgtttaaagtaagagtatcttctcttagtctgttctgcttgcatggaagtggtaagctag 24120024  T
Q  119 ttacgtctgatggtgggatgagtgacaatctgagcaaaatct 160  Q
    |||   ||| |||||| | |||||||||||||||| ||||||    
T  24120025 ttaaacctgttggtggaaagagtgacaatctgagccaaatct 24120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 28901776 - 28901685
Alignment:
Q  2 ccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttc 93  Q
    ||||||||| |||||  || |||||||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||||| ||||||    
T  28901776 ccttgaccaaccccaatggttttaggagatacatacgtgtatcttggaattgtatgtggttgaaagtaagagtatcttctctaagcttgttc 28901685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 5570386 - 5570305
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttt 265  Q
    |||||||||  |||||||||  ||||| ||||| |||  |||||||||||||||||||| ||||||||||||||||||||||    
T  5570386 taacttcttattattgtgttgtttgagtacaagcaacaatttaagtttggggttgtgataacggagcatcatatgatatttt 5570305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 12956431 - 12956512
Alignment:
Q  249 gcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||| |||||||||||  ||||||||||||||||||||||| |||| |||| ||||| ||||||| |||||| ||||||    
T  12956431 gcatcatgtgatatttttgtctatgtttttagtacttttctttgcatttgaagataaataagatgagagttagaggagttgt 12956512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 14977280 - 14977199
Alignment:
Q  249 gcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||||||||||||||   ||||||||||| ||||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  14977280 gcatcatatgatatttttaactatgtttttagcacttttctttgcattttaagacaaataagatgagagttagaggagttgt 14977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 28973573 - 28973490
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttg 267  Q
    |||||||||| |||||||||||||   |||||| ||| |||||||||||||||||  |||||  | ||||||||||||||||||    
T  28973573 taacttcttgttattgtgtttcttaccgacaagcaactgtttaagtttggggttgcaatgacaaaacatcatatgatatttttg 28973490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 11310379 - 11310318
Alignment:
Q  247 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    |||||||||||||||||||| | |||||||||||||||| |||||| |||| |||| |||||    
T  11310379 gagcatcatatgatattttttgctatgtttttagtacttatctttgcatttgaagaaaaata 11310318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 330
Target Start/End: Original strand, 16054225 - 16054317
Alignment:
Q  238 gtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||||| ||||||||||||| | |||||| ||||| |||||||| ||||||||| |||| |||||||||| ||| ||| |||||| ||||||    
T  16054225 gtgatgacagagcatcatatgaca-ttttggctatgtctttagtactttttctttgcatttgaagacaaataagataagagttagaggagttgt 16054317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 29291670 - 29291755
Alignment:
Q  206 ttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 291  Q
    ||||||| ||| |||| |||||||||| |||| |||| ||||| |||||||||||||||| || ||||||||| ||  ||||||||    
T  29291670 ttgaggataagcaacgatttaagtttgaggttatgattacggaacatcatatgatattttaggctatgttttttgttattttcttt 29291755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 32239219 - 32239310
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    |||||| || ||||| |||||||||||||| ||||||||||| ||||||||||  |||| |||| | ||| ||| | |||||||| ||||||    
T  32239219 tgatgatggtgcatcgtatgatatttttggctatgtttttagcacttttctttacatttgaagatagataagataataattagaggagttgt 32239310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 6358629 - 6358727
Alignment:
Q  238 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgttgatgg 336  Q
    |||||||| |||||  |||||| ||||| || |||||||||||||||||| |||| |||| |||||| ||| | |||||  ||||| ||||||| ||||    
T  6358629 gtgatgacagagcactatatgacattttgggctatgtttttagtacttttatttgcatttgaagacatataagttgagagatagaggagttgttaatgg 6358727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 12957621 - 12957559
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 392  Q
    |||||||||||||||  ||||| ||  ||||||||||||||||||||||||| || |||||||    
T  12957621 ttgatggacgaaattgacaagtgcactaaatcgtaacaagtaataaagtagtaagcttatcgt 12957559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 5570565 - 5570508
Alignment:
Q  22 tttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatctt 79  Q
    |||||||| || |||||||||||||| |||| ||| |||||||||||||| |||||||    
T  5570565 tttaggagatatatacgtgtatcttgaaattgtatgtggttgaaagtaatagtatctt 5570508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 12755894 - 12755987
Alignment:
Q  20 gctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaa 113  Q
    |||||| ||| |||||| || |||||||||||| || | ||||||||||||  ||||||||||||||  ||| |  ||||||||||| ||||||    
T  12755894 gctttatgagatacatatgtatatcttggaattgtaaccggttgaaagtaagagtatcttctctaagaatgtcccacttgcatggaagtggtaa 12755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 395
Target Start/End: Complemental strand, 32240511 - 32240446
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||| ||||| |||||| ||  |||| |||||||||||||||||||| || ||||||||||    
T  32240511 ttgatggacaaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaagtttatcgttct 32240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 29047499 - 29047408
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 330  Q
    ||||||| |||||||||||||||  ||||| ||| || ||||||| ||||||||| |||| || ||||||| ||||||| |||||| ||||||    
T  29047499 tgatgacagagcatcatatgata-atttggctatattattagtactttttctttgcatttgaaaacaaataagatgagagttagaggagttgt 29047408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 13305721 - 13305658
Alignment:
Q  332 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 395  Q
    ||||||||||||| |||||| |   |||| |||||||||||||||||||| || ||||||||||    
T  13305721 gatggacgaaattggcaagtgcgcaaaattgtaacaagtaataaagtagttagtttatcgttct 13305658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 381
Target Start/End: Original strand, 13803096 - 13803147
Alignment:
Q  330 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 381  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||| ||||    
T  13803096 ttgatggacgaaattgacaagtgcatcaaatcgtaacaagtaataaaatagt 13803147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 22894952 - 22894905
Alignment:
Q  20 gctttaggaggtacatacgtgtatcttggaattttatctggttgaaag 67  Q
    |||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  22894952 gctttaggagatacatacgtgtgtcttggaattgtatgtggttgaaag 22894905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 28292525 - 28292459
Alignment:
Q  21 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 87  Q
    |||||||||||| ||||||||||||| ||||| ||  ||||||||| |||  ||||||||| |||||    
T  28292525 ctttaggaggtagatacgtgtatctttgaattataagtggttgaaattaagagtatcttctttaagt 28292459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 30851284 - 30851230
Alignment:
Q  237 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 291  Q
    |||||||| ||| | ||||||||||||||||| ||||||||||||  ||||||||    
T  30851284 tgtgatgatggaacgtcatatgatatttttggctatgtttttagttattttcttt 30851230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 26829427 - 26829472
Alignment:
Q  200 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||| |||||||||||||||| || ||||||||||||||| |||||    
T  26829427 tgttacttgaggacaagaaacagtctaagtttggggttgtaatgac 26829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 26853646 - 26853601
Alignment:
Q  357 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 402  Q
    ||||||||||||||||||||||||| || | |||||||| ||||||    
T  26853646 aaatcgtaacaagtaataaagtagtaagttcatcgttctccacagg 26853601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 25180687 - 25180727
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  25180687 cttgaggataagaaactatttaagtttggggttgtgatgac 25180727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 29765357 - 29765397
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  29765357 cttgaggacaagcaacaatttaagtttggggttgtgatgac 29765397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 30543711 - 30543763
Alignment:
Q  255 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaat 307  Q
    |||||||||||| | ||||||||||||| |||| |||| |||| |||||||||    
T  30543711 tatgatatttttagctatgtttttagtatttttttttgcatttgaagacaaat 30543763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 33878272 - 33878232
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33878272 cttgaggacaaggaatggttcaagtttggggttgtgatgac 33878232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 22783 - 22661
Alignment:
Q  184 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 283  Q
    |||||||||||||||||||| ||||||| |||| |||  ||||||||||||||||||||||  || ||||||||   |||||||| ||||||||| ||||    
T  22783 taacttcttgctattgtgttgcttgagggcaagcaacactttaagtttggggttgtgatgatagaccatcatataccatttttggctatgttttttgtac 22684  T
Q  284 ttttctttgaatttaaagacaaa 306  Q
    |||| |||| |||| ||||||||    
T  22683 ttttatttgcatttgaagacaaa 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2071 - 1952
Alignment:
Q  182 tctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagt 281  Q
    ||||||||||||||||| | || ||||| |||||| |||| |||||||||||||||| ||||| |||  || ||||||| |||||   ||||||||||||    
T  2071 tctaacttcttgctatttttttgcttgatgacaagtaacgttttaagtttggggttgcgatgatggaatataatatgatgtttttaactatgtttttagt 1972  T
Q  282 acttttctttgaatttaaag 301  Q
      ||||||||| ||||||||    
T  1971 tattttctttgcatttaaag 1952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 6128 - 6205
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 316  Q
    |||||||  |||||||||||  |||||||| ||||||||||||||||||||||  ||||||| ||||||| |||||||    
T  6128 tgatgacatagcatcatatggcatttttggctatgtttttagtacttttctttccatttaaacacaaataagatgaga 6205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 7421 - 7349
Alignment:
Q  331 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacaggt 403  Q
    ||||||||||||||  ||||| ||  ||||||||||||||||||||||||| || |||||||||| |||||||    
T  7421 tgatggacgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgttctccacaggt 7349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 21336 - 21398
Alignment:
Q  246 ggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||| |||| |||| |||||    
T  21336 ggagcatcatatgatattttttattatgtttttagtgtttttctttgcatttgaagaaaaata 21398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 8892 - 8816
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgag 315  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||| |||  |||| |||| ||||| ||||||    
T  8892 tgatgatggaacatcatatgatatttttggttatttttttagtacttttattttcattttaagaaaaataagatgag 8816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 13239 - 13170
Alignment:
Q  254 atatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 323  Q
    ||||||||||||| |||||||||||||||||||| |||  || | |||||||||| ||||||| ||||||    
T  13239 atatgatatttttagttatgtttttagtacttttattttcatattaagacaaataagatgagagttagag 13170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 446937 - 447014
Alignment:
Q  239 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgaga 316  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||| ||||  |||| |||||||||| |||||||    
T  446937 tgatgacagagcatcatatgatattttt-gctatgtttttagtacttttcctttacatttgaagacaaataagatgaga 447014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 27128 - 27068
Alignment:
Q  248 agcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 308  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||| |||| |||||    
T  27128 agcatcacatgatattttcggctatgtttttagtacttttctttgcatttgaagataaata 27068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 3168 - 3237
Alignment:
Q  23 ttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgtt 92  Q
    ||||||| |||||| |||||||||| |||| ||| |||||||||||||  ||||| | ||||||||||||    
T  3168 ttaggagatacatatgtgtatcttgaaattgtatgtggttgaaagtaagagtatcctttctaagtttgtt 3237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 24001 - 24041
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  24001 cttgaggacaaggaatggtttaagtttggggttgtgatgac 24041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 28239 - 28279
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  28239 cttgaggacaaggaacggttcaagtttggggttgtgatgac 28279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 25278 - 25216
Alignment:
Q  180 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgat 242  Q
    |||||||||| || ||||| |||| |||||||||||| |||   |||||||||||||||||||    
T  25278 attctaacttttttctattttgttacttgaggacaagcaacatattaagtttggggttgtgat 25216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 28544 - 28585
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgacg 246  Q
    |||||||||||| || |||| |||||||||||||||||||||    
T  28544 cttgaggacaaggaatggttcaagtttggggttgtgatgacg 28585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 3881 - 3841
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  3881 cttgaggacaaggaatggttcaagtttggggttgtgatgac 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 1094 - 1054
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1094 cttgaggacaaggaatggttcaagtttggggttgtgatgac 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 3979 - 4023
Alignment:
Q  200 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 244  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||    
T  3979 tgttccttgaggactagaaagggttcaagtttggggttgtgatga 4023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 38422 - 38382
Alignment:
Q  205 cttgaggacaagaaacggtttaagtttggggttgtgatgac 245  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  38422 cttgaggacaagcaacaatttaagtttggggttgtgatgac 38382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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