View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18117_high_4 (Length: 269)
Name: NF18117_high_4
Description: NF18117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18117_high_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 35409097 - 35409365
Alignment:
| Q |
1 |
tgtgctcattgtatctcctttgttcagcttgannnnnnnattattaacaatattttttgctattcaaaaaacaaaagtaatgggaaaactaatgaaggat |
100 |
Q |
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| T |
35409097 |
tgtgctcattgtatctccgttgttcagcttgatttttttattattaacaatattttttgctattcaaaaaacaaaagtaatgggaaaactaatgaaggat |
35409196 |
T |
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| Q |
101 |
aaccaaagtatctctaattgaagttgctttaatattgcatactcttttcattttannnnnnncacaaaaaattagcgtactcttgatcatgcaactgaat |
200 |
Q |
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| T |
35409197 |
aaccaaagtatctctaattgaagttgctttaatattgcatactcttttcattttatttttttcacaaaaaattagcgtactcttgatcatgcaactgaat |
35409296 |
T |
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| Q |
201 |
ttgtagcaatttttctagcttatcacgagttatctatgcaacttttgatataaaaagacaaagaataat |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
35409297 |
ttgtagcaatttttctagcttatcacgagttatctatgcaacttttgatataaaaagacaatgaataat |
35409365 |
T |
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