View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18120_low_9 (Length: 374)
Name: NF18120_low_9
Description: NF18120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18120_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 32079413 - 32079059
Alignment:
| Q |
1 |
atcaaagtctatctaatatctcagtatcaatatcacagaattgtgaaaatggatatgaataattgaagaccctaggcaaaatcaaagtgtttctatggag |
100 |
Q |
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| T |
32079413 |
atcaaagtctatctaatatctcagtatcaatatcacagaattgtgaaaatggatatgaagaattgaagaccctaggcaaaatcaaagtgtttctatgaag |
32079314 |
T |
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| Q |
101 |
gtgttgtnnnnnnnnnnnngataaaaacttactaagaagaatgcttatattgttcaaaaaagaagaagaatgcttataaggtatgatctcagtctctacc |
200 |
Q |
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| T |
32079313 |
gtgttgttatatata----gataaaaacttactaagaagaatgcttatattgttcaaaaaagaagaagaatgcttataaggtatgatctcagtctctacc |
32079218 |
T |
|
| Q |
201 |
ccatccgtcaaaaacatgaatcaatatggagcgtatgtcttttgatttttaaggattggcatgcctttggagattcaagactacatatttggttacatga |
300 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32079217 |
ccatccgtcaaaaacatgaatcaatatggagcatatgtcttttgatgtttaaggattggcatgcctttggagattcaagactacatatttggttacatga |
32079118 |
T |
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| Q |
301 |
aaagttaatgttattgaattaattaagagttactttggattggtgaatttgggcctatg |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32079117 |
aaagttaatgttattgaattaattaagagttactttggattggtgaatttgggcctatg |
32079059 |
T |
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