View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18124_high_4 (Length: 524)

Name: NF18124_high_4
Description: NF18124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18124_high_4
NF18124_high_4
[»] chr4 (54 HSPs)
chr4 (163-348)||(5418801-5418985)
chr4 (163-365)||(17450727-17450928)
chr4 (165-295)||(54150839-54150968)
chr4 (427-506)||(20281680-20281759)
chr4 (428-506)||(2229336-2229414)
chr4 (428-506)||(4058804-4058882)
chr4 (428-506)||(26916414-26916492)
chr4 (428-506)||(41414596-41414674)
chr4 (428-506)||(47867968-47868046)
chr4 (428-505)||(39078246-39078323)
chr4 (431-506)||(16473837-16473912)
chr4 (428-506)||(7654706-7654784)
chr4 (434-506)||(16604837-16604909)
chr4 (428-506)||(14332849-14332927)
chr4 (428-505)||(10069787-10069864)
chr4 (428-485)||(12002618-12002675)
chr4 (428-504)||(24940456-24940532)
chr4 (428-487)||(29203614-29203673)
chr4 (428-506)||(28668986-28669064)
chr4 (428-505)||(20716270-20716347)
chr4 (429-506)||(55580759-55580836)
chr4 (428-487)||(50080441-50080500)
chr4 (428-506)||(17794526-17794604)
chr4 (431-506)||(56318058-56318133)
chr4 (428-506)||(5483263-5483341)
chr4 (428-506)||(21722667-21722745)
chr4 (428-500)||(8683291-8683363)
chr4 (435-487)||(35310734-35310786)
chr4 (428-503)||(32203305-32203380)
chr4 (430-500)||(42915625-42915695)
chr4 (431-476)||(52535585-52535630)
chr4 (435-483)||(7438760-7438808)
chr4 (428-502)||(5064640-5064714)
chr4 (428-500)||(1585334-1585404)
chr4 (428-500)||(48793615-48793685)
chr4 (235-367)||(38476234-38476366)
chr4 (428-478)||(19351968-19352019)
chr4 (231-362)||(25197400-25197531)
chr4 (435-486)||(31532445-31532496)
chr4 (235-365)||(16529828-16529958)
chr4 (449-487)||(32280009-32280047)
chr4 (428-506)||(32410417-32410495)
chr4 (429-483)||(38140698-38140752)
chr4 (455-504)||(31280280-31280329)
chr4 (327-367)||(37182697-37182737)
chr4 (215-361)||(56192216-56192360)
chr4 (428-506)||(28142607-28142685)
chr4 (433-483)||(40411762-40411812)
chr4 (466-503)||(5815561-5815598)
chr4 (428-485)||(14583839-14583896)
chr4 (428-461)||(32203413-32203446)
chr4 (428-456)||(23978133-23978161)
chr4 (232-276)||(36284641-36284685)
chr4 (442-506)||(47516190-47516254)
[»] chr7 (33 HSPs)
chr7 (163-346)||(27164484-27164663)
chr7 (428-506)||(46760248-46760326)
chr7 (428-506)||(6191136-6191214)
chr7 (428-506)||(18102621-18102699)
chr7 (428-506)||(45486046-45486124)
chr7 (428-505)||(19912760-19912837)
chr7 (163-280)||(37526697-37526812)
chr7 (428-506)||(14805961-14806038)
chr7 (428-506)||(15252955-15253032)
chr7 (428-506)||(12632335-12632413)
chr7 (428-506)||(25737618-25737696)
chr7 (428-505)||(35923344-35923420)
chr7 (431-506)||(25944667-25944742)
chr7 (431-487)||(14574674-14574730)
chr7 (428-487)||(47779714-47779773)
chr7 (429-487)||(37767011-37767069)
chr7 (448-505)||(20123691-20123748)
chr7 (428-506)||(4910626-4910702)
chr7 (431-487)||(15995829-15995886)
chr7 (428-500)||(22632186-22632258)
chr7 (428-478)||(27810737-27810787)
chr7 (428-485)||(44682989-44683046)
chr7 (443-487)||(11780127-11780171)
chr7 (432-471)||(31549751-31549790)
chr7 (435-485)||(19492391-19492441)
chr7 (429-483)||(22369330-22369384)
chr7 (429-483)||(33153148-33153202)
chr7 (461-506)||(35068872-35068918)
chr7 (428-506)||(35887960-35888038)
chr7 (431-505)||(40560469-40560543)
chr7 (328-365)||(26576191-26576228)
chr7 (304-368)||(965227-965291)
chr7 (428-464)||(16917604-16917640)
[»] chr8 (43 HSPs)
chr8 (172-367)||(8851425-8851620)
chr8 (187-365)||(13125152-13125329)
chr8 (428-506)||(43216340-43216418)
chr8 (428-506)||(26483621-26483699)
chr8 (428-506)||(13143938-13144017)
chr8 (428-506)||(7022396-7022474)
chr8 (428-506)||(7858617-7858695)
chr8 (428-506)||(34890167-34890245)
chr8 (428-506)||(36190861-36190939)
chr8 (428-501)||(30575827-30575900)
chr8 (430-506)||(24892930-24893006)
chr8 (428-498)||(8709779-8709849)
chr8 (428-506)||(15957902-15957982)
chr8 (455-506)||(31734204-31734255)
chr8 (428-506)||(34158283-34158362)
chr8 (435-504)||(41086386-41086455)
chr8 (439-487)||(15824641-15824689)
chr8 (428-500)||(29920261-29920333)
chr8 (428-487)||(2052971-2053030)
chr8 (428-495)||(16358105-16358172)
chr8 (431-506)||(28348699-28348774)
chr8 (428-479)||(45190700-45190751)
chr8 (427-481)||(11158675-11158729)
chr8 (428-506)||(8711966-8712039)
chr8 (435-502)||(8107617-8107685)
chr8 (443-502)||(35525680-35525737)
chr8 (428-505)||(35456013-35456094)
chr8 (428-493)||(7499817-7499882)
chr8 (430-506)||(41362302-41362378)
chr8 (428-475)||(44663785-44663832)
chr8 (443-493)||(16879400-16879450)
chr8 (430-483)||(34900037-34900090)
chr8 (428-487)||(4046886-4046946)
chr8 (431-483)||(6401732-6401784)
chr8 (428-504)||(38072254-38072330)
chr8 (429-485)||(40773397-40773453)
chr8 (455-506)||(13143853-13143904)
chr8 (428-506)||(17336831-17336909)
chr8 (428-506)||(17713312-17713390)
chr8 (432-486)||(17749562-17749616)
chr8 (327-368)||(25086986-25087027)
chr8 (432-500)||(12108251-12108319)
chr8 (428-456)||(13144262-13144290)
[»] chr3 (57 HSPs)
chr3 (181-347)||(37104081-37104245)
chr3 (428-506)||(30189666-30189744)
chr3 (428-506)||(35963247-35963325)
chr3 (428-506)||(46711609-46711687)
chr3 (428-504)||(9264648-9264724)
chr3 (428-506)||(31837014-31837092)
chr3 (428-506)||(37042368-37042446)
chr3 (428-505)||(41476286-41476364)
chr3 (428-506)||(50650988-50651066)
chr3 (428-504)||(7866434-7866510)
chr3 (428-506)||(11054262-11054341)
chr3 (430-506)||(19464170-19464248)
chr3 (428-506)||(23910464-23910542)
chr3 (428-506)||(47864286-47864364)
chr3 (428-500)||(26208115-26208187)
chr3 (435-506)||(23311551-23311622)
chr3 (428-506)||(50730203-50730282)
chr3 (428-506)||(50782572-50782651)
chr3 (428-506)||(14752159-14752237)
chr3 (429-506)||(36546637-36546714)
chr3 (429-506)||(36561601-36561678)
chr3 (433-506)||(37075055-37075128)
chr3 (428-505)||(53270331-53270407)
chr3 (428-504)||(28875503-28875579)
chr3 (428-487)||(29235301-29235360)
chr3 (428-498)||(6075184-6075254)
chr3 (429-505)||(33973518-33973595)
chr3 (428-506)||(579096-579167)
chr3 (428-496)||(54464847-54464915)
chr3 (428-485)||(8703220-8703278)
chr3 (428-485)||(9055107-9055165)
chr3 (428-485)||(8769530-8769587)
chr3 (163-264)||(48085480-48085580)
chr3 (433-501)||(26724947-26725015)
chr3 (455-506)||(6438178-6438229)
chr3 (428-485)||(8764630-8764687)
chr3 (428-503)||(2927387-2927463)
chr3 (428-484)||(47115966-47116022)
chr3 (432-506)||(22479009-22479083)
chr3 (428-474)||(47866875-47866921)
chr3 (428-505)||(25242129-25242206)
chr3 (257-356)||(48082370-48082469)
chr3 (428-506)||(8096969-8097047)
chr3 (428-506)||(10115000-10115078)
chr3 (428-506)||(38401469-38401551)
chr3 (443-506)||(20847235-20847297)
chr3 (430-505)||(47443927-47444002)
chr3 (428-483)||(54725572-54725627)
chr3 (428-506)||(2994366-2994444)
chr3 (428-506)||(10014358-10014436)
chr3 (428-506)||(10252100-10252178)
chr3 (325-375)||(11137588-11137638)
chr3 (436-506)||(22455967-22456037)
chr3 (435-504)||(32619787-32619857)
chr3 (435-506)||(17587794-17587865)
chr3 (428-456)||(34195027-34195055)
chr3 (234-286)||(45073411-45073463)
[»] chr2 (42 HSPs)
chr2 (189-347)||(30471442-30471599)
chr2 (163-292)||(22832218-22832346)
chr2 (428-505)||(35517215-35517292)
chr2 (428-506)||(12938333-12938411)
chr2 (428-506)||(45085348-45085426)
chr2 (163-292)||(22823417-22823545)
chr2 (431-506)||(28599142-28599217)
chr2 (428-506)||(6110190-6110268)
chr2 (428-506)||(11617115-11617193)
chr2 (428-506)||(19264191-19264269)
chr2 (428-505)||(3201418-3201495)
chr2 (245-365)||(20379783-20379903)
chr2 (428-506)||(45660456-45660537)
chr2 (428-506)||(43415492-43415570)
chr2 (428-500)||(9864709-9864782)
chr2 (428-485)||(35115794-35115851)
chr2 (430-506)||(33198624-33198700)
chr2 (429-485)||(35023010-35023066)
chr2 (428-486)||(7645218-7645276)
chr2 (428-500)||(25572142-25572214)
chr2 (428-500)||(40808711-40808783)
chr2 (181-251)||(20379927-20379996)
chr2 (428-506)||(24204520-24204598)
chr2 (428-505)||(28858401-28858481)
chr2 (428-493)||(41528360-41528426)
chr2 (455-506)||(14874054-14874105)
chr2 (428-486)||(6765924-6765982)
chr2 (435-485)||(44455101-44455151)
chr2 (429-506)||(32010193-32010270)
chr2 (428-500)||(8701699-8701771)
chr2 (428-500)||(29524032-29524104)
chr2 (435-487)||(5963310-5963362)
chr2 (443-501)||(5280536-5280595)
chr2 (428-463)||(11825350-11825385)
chr2 (435-473)||(32428098-32428136)
chr2 (435-500)||(30830594-30830659)
chr2 (428-485)||(33677595-33677652)
chr2 (429-480)||(33932915-33932966)
chr2 (430-486)||(4707532-4707585)
chr2 (428-506)||(26998408-26998486)
chr2 (428-456)||(16492930-16492958)
chr2 (326-370)||(32406855-32406899)
[»] chr1 (58 HSPs)
chr1 (163-308)||(48260914-48261057)
chr1 (163-368)||(32473959-32474163)
chr1 (428-504)||(24190562-24190638)
chr1 (181-337)||(27000995-27001150)
chr1 (428-506)||(15959632-15959710)
chr1 (428-506)||(32623997-32624075)
chr1 (428-505)||(39555578-39555655)
chr1 (428-504)||(6786931-6787007)
chr1 (163-295)||(17349911-17350042)
chr1 (428-504)||(33369643-33369719)
chr1 (428-506)||(2126129-2126207)
chr1 (430-504)||(4672924-4672998)
chr1 (428-506)||(11241118-11241196)
chr1 (428-506)||(28016738-28016816)
chr1 (428-504)||(40718771-40718847)
chr1 (428-506)||(35691484-35691561)
chr1 (428-506)||(45226229-45226307)
chr1 (428-496)||(13136546-13136614)
chr1 (428-504)||(32742194-32742270)
chr1 (428-500)||(52985030-52985102)
chr1 (430-504)||(6785549-6785622)
chr1 (437-506)||(12448969-12449037)
chr1 (435-506)||(46543073-46543144)
chr1 (431-506)||(46818497-46818572)
chr1 (428-506)||(33431650-33431728)
chr1 (428-506)||(43667295-43667373)
chr1 (428-504)||(32983164-32983239)
chr1 (432-502)||(7467958-7468029)
chr1 (391-506)||(3874974-3875087)
chr1 (428-506)||(42965808-42965885)
chr1 (434-506)||(1820505-1820578)
chr1 (440-485)||(39932576-39932621)
chr1 (430-506)||(47014487-47014561)
chr1 (428-487)||(24728618-24728678)
chr1 (428-500)||(44148828-44148900)
chr1 (428-503)||(3076389-3076464)
chr1 (429-503)||(30221819-30221893)
chr1 (428-492)||(7875932-7875996)
chr1 (429-485)||(28120748-28120804)
chr1 (163-346)||(9904144-9904324)
chr1 (448-506)||(2246026-2246084)
chr1 (428-506)||(45840058-45840136)
chr1 (428-503)||(1034951-1035024)
chr1 (428-487)||(50012688-50012748)
chr1 (429-483)||(7190770-7190824)
chr1 (428-506)||(30701377-30701455)
chr1 (428-506)||(50176613-50176691)
chr1 (430-478)||(47600030-47600078)
chr1 (299-367)||(51776541-51776609)
chr1 (440-487)||(3861699-3861746)
chr1 (428-506)||(25185295-25185374)
chr1 (430-464)||(6304791-6304825)
chr1 (428-506)||(7397797-7397875)
chr1 (30-60)||(14958073-14958103)
chr1 (232-321)||(47024349-47024438)
chr1 (448-500)||(37735395-37735447)
chr1 (388-416)||(44148787-44148815)
chr1 (308-368)||(48379469-48379529)
[»] scaffold0300 (1 HSPs)
scaffold0300 (427-506)||(564-643)
[»] chr5 (39 HSPs)
chr5 (166-297)||(1987795-1987925)
chr5 (430-506)||(34425421-34425497)
chr5 (428-504)||(42273740-42273816)
chr5 (163-367)||(42697827-42698030)
chr5 (428-506)||(20644105-20644183)
chr5 (181-367)||(36972133-36972313)
chr5 (428-506)||(43589954-43590032)
chr5 (429-506)||(20039193-20039270)
chr5 (428-506)||(6686475-6686554)
chr5 (428-506)||(37562753-37562832)
chr5 (428-506)||(11261876-11261954)
chr5 (439-506)||(37522592-37522659)
chr5 (391-487)||(12792741-12792837)
chr5 (428-487)||(9957427-9957485)
chr5 (428-487)||(12729877-12729935)
chr5 (428-494)||(23233514-23233580)
chr5 (438-487)||(32019931-32019980)
chr5 (435-503)||(19413235-19413303)
chr5 (428-500)||(25840961-25841033)
chr5 (429-485)||(30893243-30893299)
chr5 (427-506)||(38130105-38130186)
chr5 (431-506)||(43454318-43454393)
chr5 (433-506)||(12912292-12912364)
chr5 (441-506)||(41625517-41625581)
chr5 (431-483)||(32079618-32079670)
chr5 (454-505)||(5984126-5984177)
chr5 (451-506)||(8225553-8225608)
chr5 (455-506)||(32111093-32111144)
chr5 (236-293)||(10568136-10568193)
chr5 (428-464)||(4463491-4463527)
chr5 (235-367)||(23418857-23418989)
chr5 (16-60)||(24659946-24659989)
chr5 (428-503)||(39505224-39505300)
chr5 (304-367)||(9622416-9622479)
chr5 (443-506)||(16153353-16153416)
chr5 (428-503)||(17351482-17351557)
chr5 (428-506)||(5736232-5736310)
chr5 (328-369)||(19279423-19279464)
chr5 (28-56)||(19764678-19764706)
[»] chr6 (18 HSPs)
chr6 (428-506)||(21542509-21542587)
chr6 (428-506)||(35129046-35129124)
chr6 (431-506)||(11082240-11082315)
chr6 (428-506)||(34177633-34177711)
chr6 (428-487)||(17751736-17751795)
chr6 (428-500)||(7274867-7274939)
chr6 (435-506)||(3095719-3095789)
chr6 (428-485)||(9428857-9428914)
chr6 (428-501)||(12461421-12461493)
chr6 (435-506)||(30794191-30794262)
chr6 (428-503)||(14573120-14573194)
chr6 (428-503)||(4032079-4032157)
chr6 (304-367)||(15489373-15489435)
chr6 (429-483)||(5121449-5121503)
chr6 (428-456)||(3888845-3888873)
chr6 (429-505)||(5822027-5822103)
chr6 (428-456)||(7359108-7359136)
chr6 (428-456)||(16524829-16524857)
[»] scaffold0045 (1 HSPs)
scaffold0045 (428-506)||(78048-78126)
[»] scaffold0062 (1 HSPs)
scaffold0062 (428-506)||(44763-44841)
[»] scaffold0442 (1 HSPs)
scaffold0442 (428-506)||(10136-10214)
[»] scaffold0132 (2 HSPs)
scaffold0132 (428-505)||(1104-1181)
scaffold0132 (428-505)||(9064-9141)
[»] scaffold0043 (1 HSPs)
scaffold0043 (301-362)||(71724-71785)
[»] scaffold0009 (1 HSPs)
scaffold0009 (428-500)||(157891-157963)
[»] scaffold0018 (2 HSPs)
scaffold0018 (435-505)||(154953-155022)
scaffold0018 (28-56)||(63145-63173)
[»] scaffold0774 (1 HSPs)
scaffold0774 (455-506)||(3447-3498)
[»] scaffold0565 (1 HSPs)
scaffold0565 (428-506)||(5867-5945)
[»] scaffold0330 (1 HSPs)
scaffold0330 (428-506)||(3259-3337)
[»] scaffold0001 (1 HSPs)
scaffold0001 (308-367)||(428281-428340)
[»] scaffold0355 (1 HSPs)
scaffold0355 (325-367)||(2819-2861)
[»] scaffold0005 (1 HSPs)
scaffold0005 (428-485)||(233479-233536)


Alignment Details
Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 163 - 348
Target Start/End: Complemental strand, 5418985 - 5418801
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacaca-aaaaatgaacagagagaaggtccttct 261  Q
    |||||||||| || ||| || ||| ||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |    
T  5418985 ataactctatattattacatctcttaaacactcatt-tattttattagaaaatattaaacgaaattcacacacaaaaatgaagagagagaaggtccttat 5418887  T
Q  262 ataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacacca 348  Q
    |||  ||||||| | ||||||||||||||||||| | | || ||| ||||||||| ||||||| |||||||||||||||||||||||    
T  5418886 ataaacacccttgtatataagcaccaataaatatcactccacaat-ggggtgcctatttagctcggtgctaaataggtgaaacacca 5418801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 163 - 365
Target Start/End: Original strand, 17450727 - 17450928
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || ||| |||| ||||||||||||| |||||||||| |||||||||| | ||||||||||| |||||||| ||||||||||| ||| ||    
T  17450727 ataactctatattattacatttttaaaacactcatt-tatttcattaaaaaatattaattcaaattcacacataaaatgaagagagagaaggtgcttata 17450825  T
Q  263 taggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatgg 362  Q
    |||| |||||||||||||||||||||||||||| | | || ||| ||| ||||| ||||||  | |||| |||||||||| |||| | ||||| | ||||    
T  17450826 tagggacccttctctataagcaccaataaatatcactccacaatagggatgcctatttagcccgatgctgaataggtgaagcacccaccattgcgtatgg 17450925  T
Q  363 tct 365  Q
    |||    
T  17450926 tct 17450928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 54150968 - 54150839
Alignment:
Q  165 aactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctata 264  Q
    |||||||| || ||| |||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  54150968 aactctatattattacatttctaaaacactcatt-tatttcattagaaagtgttaaatgaaattcatacaaaaaatgaagagagagaaggtccttatata 54150870  T
Q  265 ggcacccttctctataagcaccaataaatat 295  Q
      |||||||||||||||||||||||||||||    
T  54150869 aacacccttctctataagcaccaataaatat 54150839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 427 - 506
Target Start/End: Complemental strand, 20281759 - 20281680
Alignment:
Q  427 tatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  20281759 tatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 20281680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 2229414 - 2229336
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2229414 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 2229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 4058882 - 4058804
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4058882 atcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 4058804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 26916492 - 26916414
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  26916492 atcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttatagg 26916414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 41414596 - 41414674
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  41414596 atcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttatagg 41414674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 47868046 - 47867968
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  47868046 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 47867968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 39078323 - 39078246
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  39078323 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatag 39078246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 16473912 - 16473837
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16473912 acacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 16473837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 7654784 - 7654706
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  7654784 atcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 7654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 434 - 506
Target Start/End: Original strand, 16604837 - 16604909
Alignment:
Q  434 cttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  16604837 cttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttatagg 16604909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 14332927 - 14332849
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||||||    
T  14332927 atcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttatagg 14332849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 10069864 - 10069787
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||    
T  10069864 atcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatag 10069787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 12002618 - 12002675
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12002618 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 12002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 24940532 - 24940456
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||||||||||    
T  24940532 atcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttata 24940456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 29203673 - 29203614
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29203673 atcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttct 29203614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 28668986 - 28669064
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |  |||| ||||||||||    
T  28668986 atcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttatagg 28669064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 20716347 - 20716270
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | || ||||||||||||||    
T  20716347 atcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatag 20716270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 55580836 - 55580759
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||    
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtatagg 55580759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 50080441 - 50080500
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  50080441 atcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttct 50080500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 17794526 - 17794604
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||| ||||| || |||||||||    
T  17794526 atcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttatagg 17794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 56318058 - 56318133
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||| || |||||| ||||||||    
T  56318058 acacttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttatagg 56318133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 5483263 - 5483341
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||| | ||| |||||| |||||    
T  5483263 atcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaatagg 5483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 21722667 - 21722745
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| |||||||||||||||||||||  |||||||| |||| |||||||| || || ||||||||||||    
T  21722667 atcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttatagg 21722745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 8683291 - 8683363
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||| ||||||||| |||||||||||| || ||||||||||||||||||| || || ||||||    
T  8683291 atcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagttt 8683363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 35310734 - 35310786
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  35310734 ttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttct 35310786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 32203380 - 32203305
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||||| ||||| |||||||||||||||||||||  |||||||||||||||  ||||| ||||| |||||||||    
T  32203380 atcacactaattaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttat 32203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 500
Target Start/End: Complemental strand, 42915695 - 42915625
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||| |||||||||| ||||||||||| || ||||||||||||||||||| || || ||||||    
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagttt 42915625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 431 - 476
Target Start/End: Original strand, 52535585 - 52535630
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagtttt 476  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  52535585 acacttattaagaaaactaaagcataagaatttggagtatagtttt 52535630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 483
Target Start/End: Complemental strand, 7438808 - 7438760
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7438808 ttattaagaaaactaaaacataataatttggagtatagtttttggtgtt 7438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 502
Target Start/End: Original strand, 5064640 - 5064714
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagtttta 502  Q
    |||||||||||||||||||||||||||||  |||||| |  ||| ||||||||||| ||| ||||| ||||||||    
T  5064640 atcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaataagtttta 5064714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 1585334 - 1585404
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||   ||||||||||||| ||||| ||||||    
T  1585334 atcacacttgttaagaaaagtaaaacataagattttggagtata--attttgtgttttctttgaaataagttt 1585404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 48793615 - 48793685
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||||||||||||| |||||||||||| || ||||  ||||||||||||| || || ||||||    
T  48793615 atcacacttattaagaaaactaaagcataagaatttgtagcatag--ttttgtgttttctttggaataagttt 48793685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 367
Target Start/End: Original strand, 38476234 - 38476366
Alignment:
Q  235 aaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaa 334  Q
    ||||||||| |||||||| || |||| |||  |||| ||||| |||| |||| ||| ||  || ||||||||||||||| || ||||   ||||||||||    
T  38476234 aaaaatgaagagagagaacgtgcttccataaccacctttctccataaccacccatatattatacttcataatgggggtgtctatttaatgtggtgctaaa 38476333  T
Q  335 taggtgaaacaccaatcattgtggatggtctta 367  Q
    |||||||| |||| | |||| | ||||||||||    
T  38476334 taggtgaagcacccaccattatagatggtctta 38476366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 478
Target Start/End: Complemental strand, 19352019 - 19351968
Alignment:
Q  428 atcacacttattaagaaaactaaaacat-aagaatttggagtatagtttttt 478  Q
    |||||||||||||||||||||||||||| || || |||||||||||||||||    
T  19352019 atcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttt 19351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 362
Target Start/End: Original strand, 25197400 - 25197531
Alignment:
Q  231 cacaaaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgc 330  Q
    |||||||| |||| ||||||| |||||||| |||| |||| ||||||||||||||| | | ||  || | || ||||||||||||  ||||    ||| |    
T  25197400 cacaaaaagtgaagagagagagggtccttccatagccaccattctctataagcacctaaatattatactccacaatgggggtgccaatttattacggttc 25197499  T
Q  331 taaataggtgaaacaccaatcattgtggatgg 362  Q
    |||||||||||| |||| | ||||||||||||    
T  25197500 taaataggtgaagcacccaccattgtggatgg 25197531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 486
Target Start/End: Original strand, 31532445 - 31532496
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 486  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| |||||||    
T  31532445 ttattaagaaaactaaaacattacaatttagagtatagttttttatgttttc 31532496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 365
Target Start/End: Complemental strand, 16529958 - 16529828
Alignment:
Q  235 aaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaa 334  Q
    ||||||||| ||||||| ||| |||| |||| |||| ||||| |||  |||| ||  ||  || | || ||||||||||||| ||||   ||||||||||    
T  16529958 aaaaatgaagagagagatggtgcttccatagccaccattctccatagccacccatgtattatactccacaatgggggtgcctatttaatgtggtgctaaa 16529859  T
Q  335 taggtgaaacaccaatcattgtggatggtct 365  Q
    |||||||| |||| | |||||||||||||||    
T  16529858 taggtgaagcacccaccattgtggatggtct 16529828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 487
Target Start/End: Original strand, 32280009 - 32280047
Alignment:
Q  449 aaaacataagaatttggagtatagttttttgtgttttct 487  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  32280009 aaaacataagaatttggagtataattttttgtgttttct 32280047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 32410495 - 32410417
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||| ||||||  | |||  | || ||||||||||||| ||| ||||| ||||||||||||    
T  32410495 atcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttgaaataagttttatagg 32410417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 483
Target Start/End: Original strand, 38140698 - 38140752
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||||||||||||| ||| | ||||| ||||||||||| |||||||    
T  38140698 tcacacttattaagaaaactaaagcatgataattttgagtatagtttcttgtgtt 38140752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 31280329 - 31280280
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    ||||||||| ||||||||||||||||||||||| || || ||||||||||    
T  31280329 taagaatttagagtatagttttttgtgttttctttggaataagttttata 31280280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 37182697 - 37182737
Alignment:
Q  327 gtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  37182697 gtgctaaataggtgaaacacccaccattgtggatggtctta 37182737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 361
Target Start/End: Complemental strand, 56192360 - 56192216
Alignment:
Q  215 tattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgc 314  Q
    |||||||||||| |||||  ||||||| | ||||||| ||| |||  |||| ||||||||||||||  |||| ||| || ||| | || || ||||||||    
T  56192360 tattaaatgaaactcaca--aaaaatggagagagagagggtgctttcatagccacccttctctatagacacccatatattttactccacaacgggggtgc 56192263  T
Q  315 ctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatg 361  Q
    || ||||   ||||| ||||||||| || |||| | |||||||||||    
T  56192262 ctatttaatgtggtgttaaataggtaaagcacccaccattgtggatg 56192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 28142607 - 28142685
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||| || | | |||| |  ||| ||||||||||| ||| | ||| ||||||||||||    
T  28142607 atcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatctttaaaataagttttatagg 28142685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 483
Target Start/End: Complemental strand, 40411812 - 40411762
Alignment:
Q  433 acttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||||||||||||||  | |||| | ||||||||||||||||    
T  40411812 acttattaagaaaactaaaacatagtagtttgtaatatagttttttgtgtt 40411762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 503
Target Start/End: Complemental strand, 5815598 - 5815561
Alignment:
Q  466 agtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  5815598 agtatagttttttgtgttttctttgaaataagttttat 5815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 14583896 - 14583839
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||| |||||||||||||||||| ||||||||||    ||||||| ||||||||||    
T  14583896 atcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttt 14583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 461
Target Start/End: Complemental strand, 32203446 - 32203413
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaat 461  Q
    |||||||||||||| |||||||||||||||||||    
T  32203446 atcacacttattaaaaaaactaaaacataagaat 32203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Original strand, 23978133 - 23978161
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  23978133 atcacacttattaagaaaactaaaacata 23978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 36284641 - 36284685
Alignment:
Q  232 acaaaaaatgaacagagagaaggtccttctataggcacccttctc 276  Q
    |||||||||||| ||||||| ||| |||| |||||||||||||||    
T  36284641 acaaaaaatgaagagagagagggtgcttccataggcacccttctc 36284685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 506
Target Start/End: Original strand, 47516190 - 47516254
Alignment:
Q  442 gaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||| |||||||||  | |||| | |||||||||||||||| ||| ||||| ||||||||||||    
T  47516190 gaaaagtaaaacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttatagg 47516254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 163 - 346
Target Start/End: Complemental strand, 27164663 - 27164484
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||| ||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||  ||||||||  |||||||||||||| ||    
T  27164663 ataactttatattgttacatttctaaaatactcatt-tatttcattagaaaatattaaatgaaatttacac--aaaatgaagcgagagaaggtccttata 27164567  T
Q  263 taggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacac 346  Q
    ||||||||||||||||| |  |||||||||||||| | || |||| || ||||| |||| || |||||||||||||||||||||    
T  27164566 taggcacccttctctat-actaccaataaatattactccacaatgaggatgcctatttaactcggtgctaaataggtgaaacac 27164484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 46760248 - 46760326
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46760248 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 46760326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 6191214 - 6191136
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  6191214 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttatagg 6191136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 18102699 - 18102621
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18102699 atcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagg 18102621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 45486124 - 45486046
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  45486124 atcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 45486046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 19912760 - 19912837
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  19912760 atcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatag 19912837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 163 - 280
Target Start/End: Original strand, 37526697 - 37526812
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||  |||||| |||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  37526697 ataactctacattgttacatttctaaaacattcgtt-tatttcattagaaaatattaaatgaaatt-acacaaaaaatgaagagagagaaggtccttcta 37526794  T
Q  263 taggcacccttctctata 280  Q
    || ||||  |||||||||    
T  37526795 taagcactattctctata 37526812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 14806038 - 14805961
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  14806038 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg-aaaaagttttatagg 14805961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 15253032 - 15252955
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  15253032 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg-aaaaagttttatagg 15252955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 12632335 - 12632413
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||    
T  12632335 atcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcatagg 12632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 25737618 - 25737696
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| || |||||||||||||||    
T  25737618 atcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttatagg 25737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 35923420 - 35923344
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||    
T  35923420 atcacacttattaagaaaactaaaacataaaaatttggagtatagt-ttttgtgttttctttggaaaaagttttatag 35923344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 25944742 - 25944667
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| || |||||||||||||||    
T  25944742 acacttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttatagg 25944667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 14574730 - 14574674
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  14574730 acacttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttct 14574674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 47779773 - 47779714
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||    
T  47779773 atcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttct 47779714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 487
Target Start/End: Original strand, 37767011 - 37767069
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttct 37767069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 448 - 505
Target Start/End: Original strand, 20123691 - 20123748
Alignment:
Q  448 taaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatag 20123748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 4910626 - 4910702
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||| | |||||||||||||||||||||| ||||||  |||||||||||||| |  |||||||||||||||    
T  4910626 atcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttctttagaaaaagttttatagg 4910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 15995886 - 15995829
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagtt-ttttgtgttttct 487  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  15995886 acacttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttct 15995829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 22632258 - 22632186
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||||||||||||| ||||| | |||| || |||| |||||||||||||| ||||| ||||||    
T  22632258 atcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagttt 22632186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 478
Target Start/End: Original strand, 27810737 - 27810787
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagtttttt 478  Q
    |||||||||||||| |||||  ||||||||||||||||||||| |||||||    
T  27810737 atcacacttattaacaaaacagaaacataagaatttggagtattgtttttt 27810787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 44683046 - 44682989
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||| | ||||||||||||| || |||||||||||||||||| | |||||||||||    
T  44683046 atcacattcattaagaaaactagaaaataagaatttggagtataatattttgtgtttt 44682989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 11780171 - 11780127
Alignment:
Q  443 aaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttct 11780127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 471
Target Start/End: Original strand, 31549751 - 31549790
Alignment:
Q  432 cacttattaagaaaactaaaacataagaatttggagtata 471  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  31549751 cacttattaagaaaactaaaacataaaaaattggagtata 31549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 485
Target Start/End: Original strand, 19492391 - 19492441
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||||||||||||||||||||| ||||| |||||||  ||||||| ||||    
T  19492391 ttattaagaaaactaaaacataaaaatttagagtataactttttgtatttt 19492441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 483
Target Start/End: Complemental strand, 22369384 - 22369330
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    |||||||||||||||||||||||| ||   | |||| ||||||||||||||||||    
T  22369384 tcacacttattaagaaaactaaaatattgtagtttgtagtatagttttttgtgtt 22369330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 483
Target Start/End: Complemental strand, 33153202 - 33153148
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||| ||||| ||||||||| | |||| |||||| |||||||||||    
T  33153202 tcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgtt 33153148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 506
Target Start/End: Original strand, 35068872 - 35068918
Alignment:
Q  461 tttggagtatagtttt-ttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  35068872 tttggaatatagtttttttgtgttttctttgaaaaaagttttatagg 35068918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 35887960 - 35888038
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| ||||||||||||||  | |||| |  ||| ||||||||||| ||| ||||| || |||||||||    
T  35887960 atcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataacttttatagg 35888038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 431 - 505
Target Start/End: Complemental strand, 40560543 - 40560469
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||| |||||||| || ||| ||||||  ||||| ||||||||||| ||  ||||| |||||||||||    
T  40560543 acacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatag 40560469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 26576191 - 26576228
Alignment:
Q  328 tgctaaataggtgaaacaccaatcattgtggatggtct 365  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  26576191 tgctaaataggtgaaacaccaaccatcgtggatggtct 26576228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 965291 - 965227
Alignment:
Q  304 aatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtcttag 368  Q
    ||||||||||||| ||||   |||||||||||| || ||||||  ||||||||| ||||||||||    
T  965291 aatgggggtgcctatttaatgtggtgctaaatatgttaaacactcatcattgtgaatggtcttag 965227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 16917640 - 16917604
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttg 464  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  16917640 atcacacttattaagaaaattaaaacataaaaatttg 16917604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 7e-38; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 172 - 367
Target Start/End: Complemental strand, 8851620 - 8851425
Alignment:
Q  172 ttttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaa-tgaacagagagaaggtccttctataggcacc 270  Q
    |||||||| |||||||||||||||||| ||||| | |||||||||||||| |||||| |||||||||| | || |||||||||||| || ||||||||||    
T  8851620 ttttgttacatttctaaaacactcatt-tattttactagaaaatattaaacgaaatttacacaaaaaaataaagagagagaaggtctttatataggcacc 8851522  T
Q  271 cttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    ||| ||||| ||||||||||||||||| | |||||||| | || || |||| || ||||||| ||||| ||| |||| | |||| ||||||||||||    
T  8851521 cttttctatcagcaccaataaatattactccataatggagatgtctatttaactcggtgctatataggcgaagcacccaccattatggatggtctta 8851425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 187 - 365
Target Start/End: Complemental strand, 13125329 - 13125152
Alignment:
Q  187 aaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctataggcacccttctctataagcacc 286  Q
    |||||||||||| |||||||||  |||||||||| ||||||||||| | |||||||| ||||||||||| ||| ||||| || |||||| ||||| ||||    
T  13125329 aaaacactcatt-tatttcattgaaaaatattaattgaaattcacatataaaatgaagagagagaaggtgcttatatagacatccttctttataaacacc 13125231  T
Q  287 aataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtct 365  Q
    ||||||||| | | || ||||||||||||| ||||||  | |||| ||||||||||||||| | |||||||||||||||    
T  13125230 aataaatatcactccacaatgggggtgcctatttagcccgatgcttaataggtgaaacacccaccattgtggatggtct 13125152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 43216340 - 43216418
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43216340 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 43216418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 26483699 - 26483621
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  26483699 atcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagg 26483621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 13143938 - 13144017
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctg-aaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  13143938 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttatagg 13144017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 7022396 - 7022474
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7022396 atcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 7022474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 7858695 - 7858617
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  7858695 atcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttatagg 7858617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 34890167 - 34890245
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  34890167 atcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttatagg 34890245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 36190939 - 36190861
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  36190939 atcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttatagg 36190861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 428 - 501
Target Start/End: Original strand, 30575827 - 30575900
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagtttt 501  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  30575827 atcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttt 30575900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 24893006 - 24892930
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||    
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttatagg 24892930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 498
Target Start/End: Original strand, 8709779 - 8709849
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagt 498  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  8709779 atcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagt 8709849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 15957902 - 15957982
Alignment:
Q  428 atcacacttattaagaaaa--ctaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| ||||  |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  15957902 atcacacttattaaaaaaaaactaaaatataagaaattggagtatagtttattgtgttttctttgaaaaaagttttatagg 15957982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 31734255 - 31734204
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 31734204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 34158283 - 34158362
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctct-gaaaaaagttttatagg 506  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  34158283 atcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttatagg 34158362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 435 - 504
Target Start/End: Original strand, 41086386 - 41086455
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||  |||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  41086386 ttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttata 41086455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 487
Target Start/End: Original strand, 15824641 - 15824689
Alignment:
Q  439 taagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15824641 taagaaaactaaaacataagaatttgaagtatagttttttgtgttttct 15824689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 29920261 - 29920333
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||| || || ||||||    
T  29920261 atcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagttt 29920333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 2053030 - 2052971
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||    
T  2053030 atcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttct 2052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 428 - 495
Target Start/End: Original strand, 16358105 - 16358172
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaa 495  Q
    ||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||||||| |||||||    
T  16358105 atcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttctttgaaaaa 16358172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 28348774 - 28348699
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| ||||| |||||  ||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||    
T  28348774 acacatattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttatagg 28348699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 428 - 479
Target Start/End: Complemental strand, 45190751 - 45190700
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttg 479  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  45190751 atcacacttgttaagaaaactaaaacataagaatttggagcatagttttttg 45190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 427 - 481
Target Start/End: Complemental strand, 11158729 - 11158675
Alignment:
Q  427 tatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtg 481  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  11158729 tatcaaacttattaagaaaactaaaacataagaatttggaatataattttttgtg 11158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 8712039 - 8711966
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| ||||||||||||||    ||||||||||||||||||||||||| | || |||||||||||||||    
T  8712039 atcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt-tttggaaaaagttttatagg 8711966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 8107617 - 8107685
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagtttta 502  Q
    ||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  8107617 ttattaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttgaaaaaagtttta 8107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 35525737 - 35525680
Alignment:
Q  443 aaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagtttta 502  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||    
T  35525737 aaaactaaaacataagaatttagagtatag--ttttgtgttttctttgaaaaaagtttta 35525680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 35456013 - 35456094
Alignment:
Q  428 atcacacttattaagaaaacta-----aaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||||||||||||     ||||||||||||||| ||||||||||||| |||||| | || ||||||||||||||    
T  35456013 atcacacttattaagaaaactagtgtaaaacataagaatttgaagtatagttttttatgttttttttg-aaaaagttttatag 35456094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 493
Target Start/End: Complemental strand, 7499882 - 7499817
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaa 493  Q
    |||||| |||||||||||||||||||||| |||||| |||||||  |||||| ||||||| |||||    
T  7499882 atcacatttattaagaaaactaaaacataggaatttagagtataactttttgcgttttctttgaaa 7499817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 41362302 - 41362378
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||| ||||| ||||||||||||    
T  41362302 cacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttatagg 41362378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 475
Target Start/End: Original strand, 44663785 - 44663832
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttt 475  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||    
T  44663785 atcacacttattaagaaaactaaattataagaatttagagtatagttt 44663832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 493
Target Start/End: Original strand, 16879400 - 16879450
Alignment:
Q  443 aaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaa 493  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaa 16879450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 483
Target Start/End: Complemental strand, 34900090 - 34900037
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    |||||||||||||||||||||||||||| ||||||   |||| |||||||||||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgtt 34900037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 4046886 - 4046946
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttt-tgtgttttct 487  Q
    ||||||||||||||||||| ||||  ||||||||||| || ||||||||| ||||||||||    
T  4046886 atcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttct 4046946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 483
Target Start/End: Complemental strand, 6401784 - 6401732
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||||| |||||| |||  |||||| ||||||||||||||||||    
T  6401784 acacttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgtt 6401732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 38072330 - 38072254
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||| ||||  ||||||||||    
T  38072330 atcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttata 38072254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 40773397 - 40773453
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||| |||| ||||||||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttt 40773453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 13143904 - 13143853
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||| |||||| ||||||||||||||  |||||||||||| |||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcatagg 13143853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 17336909 - 17336831
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||| |||  | |||| |  ||||||||||||||  ||| ||||| || |||||||||    
T  17336909 atcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttatagg 17336831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 17713390 - 17713312
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| ||||||||||||||  | |||| |  ||||||| ||||||| ||  ||||| ||||||||||||    
T  17713390 atcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttatagg 17713312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 486
Target Start/End: Original strand, 17749562 - 17749616
Alignment:
Q  432 cacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 486  Q
    ||||||||||||| | | |||||||| |||||| |||||||||| ||||||||||    
T  17749562 cacttattaagaatatttaaacataataatttgaagtatagtttattgtgttttc 17749616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 368
Target Start/End: Original strand, 25086986 - 25087027
Alignment:
Q  327 gtgctaaataggtgaaacaccaatcattgtggatggtcttag 368  Q
    ||||||||||||||||||||  |||||||||||| |||||||    
T  25086986 gtgctaaataggtgaaacactcatcattgtggatagtcttag 25087027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 500
Target Start/End: Complemental strand, 12108319 - 12108251
Alignment:
Q  432 cacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||||||||| |  ||  |||||| |||||| ||||||||||| ||| ||||| ||||||    
T  12108319 cacttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctttgaaataagttt 12108251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 13144290 - 13144262
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  13144290 atcacacttattaagaaaactaaaacata 13144262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 37104081 - 37104245
Alignment:
Q  181 atttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctataggcacccttctctata 280  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||| | ||| ||||| ||||||||||||||    
T  37104081 atttctaaaacactcatt-tatttcattggaaaatattaattgaaattcacacataaaatgaagagagagaagatgcttatatagacacccttctctata 37104179  T
Q  281 agcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacacc 347  Q
    ||||||||||||||| | | ||  ||  |||||||| ||||||  |||||| |||||||||||||||    
T  37104180 agcaccaataaatatcactccacgat-agggtgcctatttagcccggtgcttaataggtgaaacacc 37104245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 30189744 - 30189666
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30189744 atcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 30189666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 35963325 - 35963247
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  35963325 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttatagg 35963247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 46711609 - 46711687
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  46711609 atcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagg 46711687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 9264724 - 9264648
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  9264724 atcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaaagttttata 9264648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 31837092 - 31837014
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||    
T  31837092 atcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttatagg 31837014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 37042368 - 37042446
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || |||||||||||||||    
T  37042368 atcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttatagg 37042446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 41476286 - 41476364
Alignment:
Q  428 atcacacttattaagaaaactaaaa-cataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  41476286 atcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatag 41476364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 50650988 - 50651066
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||||||||    
T  50650988 atcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttatagg 50651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 428 - 504
Target Start/End: Original strand, 7866434 - 7866510
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  7866434 atcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttata 7866510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 11054262 - 11054341
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctct-gaaaaaagttttatagg 506  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  11054262 atcatacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttatagg 11054341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 19464248 - 19464170
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggag--tatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttatagg 19464170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 23910464 - 23910542
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||    
T  23910464 atcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttatagg 23910542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 47864364 - 47864286
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  47864364 atcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttatagg 47864286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 26208187 - 26208115
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||    
T  26208187 atcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagttt 26208115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 23311551 - 23311622
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  23311551 ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttatagg 23311622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 50730282 - 50730203
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagtt-ttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||    
T  50730282 atcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttatagg 50730203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 50782572 - 50782651
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |||||||||||||||    
T  50782572 atcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttatagg 50782651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 14752159 - 14752237
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || |||||  ||||||||    
T  14752159 atcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttatagg 14752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 36546714 - 36546637
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| || ||||||||| |||||    
T  36546714 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcatagg 36546637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 429 - 506
Target Start/End: Original strand, 36561601 - 36561678
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| || ||||||||| |||||    
T  36561601 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcatagg 36561678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 37075128 - 37075055
Alignment:
Q  433 acttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| || |||||||||||||||    
T  37075128 acttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttatagg 37075055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 53270407 - 53270331
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  53270407 atcacactcattaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatag 53270331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 28875579 - 28875503
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||| || |||||||||||||    
T  28875579 atcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaaaagttttata 28875503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 29235360 - 29235301
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  29235360 atcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttct 29235301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 498
Target Start/End: Complemental strand, 6075254 - 6075184
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagt 498  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| || |||||||    
T  6075254 atcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagt 6075184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 429 - 505
Target Start/End: Original strand, 33973518 - 33973595
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||| | |||||||||||||||    
T  33973518 tcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatag 33973595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 579096 - 579167
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||    
T  579096 atcacacttattaagaaaactaaaacataagaatttg-------gttttttgtgttttctttgaaaaaagttttatagg 579167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 428 - 496
Target Start/End: Original strand, 54464847 - 54464915
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaa 496  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||    
T  54464847 atcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttaaaaaaa 54464915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 8703278 - 8703220
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttt-tgtgtttt 485  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  8703278 atcacacttattaaaaaaactaaaacataagaatttggagtatagtttttgtgtgtttt 8703220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 9055165 - 9055107
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttt-tgtgtttt 485  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9055165 atcacacttattaaaaaaactaaaacataagaatttggagtatagtttttgtgtgtttt 9055107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 8769530 - 8769587
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  8769530 atcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttt 8769587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 48085580 - 48085480
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || ||| |||| ||||||||||||| |||||||||| |||||||||||| ||||||| ||||||| | || |||||||| || ||||||    
T  48085580 ataactctatattattacatttttaaaacactcatt-tatttcattataaaatattaaataaaattcaaacaaaaattaaagagagagaaagttcttcta 48085482  T
Q  263 ta 264  Q
    ||    
T  48085481 ta 48085480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 433 - 501
Target Start/End: Original strand, 26724947 - 26725015
Alignment:
Q  433 acttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagtttt 501  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| || || |||||||    
T  26724947 acttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagtttt 26725015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 6438229 - 6438178
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttatagg 6438178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 8764630 - 8764687
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||    
T  8764630 atcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgtttt 8764687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 2927463 - 2927387
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||| |||||||||||||||||||||||||||||| || |||| |||||||| |||||| || || |||||||||    
T  2927463 atcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttat 2927387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 484
Target Start/End: Complemental strand, 47116022 - 47115966
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttt 484  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  47116022 atcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgttt 47115966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 432 - 506
Target Start/End: Original strand, 22479009 - 22479083
Alignment:
Q  432 cacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||  | |||| |  ||||||||||||||| ||| ||||| ||||||||||||    
T  22479009 cacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttatagg 22479083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 47866875 - 47866921
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagtt 474  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  47866875 atcacacttattaaaaagactaaaacataagaatttggagtatagtt 47866921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 25242129 - 25242206
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||||||||||||||||||  | |||| |  ||||||||||||||| ||| | ||| |||||||||||    
T  25242129 atcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatag 25242206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 48082469 - 48082370
Alignment:
Q  257 cttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgt 356  Q
    |||||||||||| |||||||||||| ||||||||||||| | || | ||||| ||||||| |||| || | || ||||| |||||| |||| | ||||||    
T  48082469 cttctataggcatccttctctataaacaccaataaatatcactttacaatggaggtgcctatttaactcgatgttaaattggtgaagcacctaccattgt 48082370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 8096969 - 8097047
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||  | |||| |  ||||||| ||||||| ||  ||||| ||||||||||||    
T  8096969 atcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagg 8097047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 10115078 - 10115000
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||  | |||| |  ||| |||||||| || ||| ||||| ||||||||||||    
T  10115078 atcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttatagg 10115000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 38401551 - 38401469
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttgga----gtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||  | |||| |     |||||||||||||||| ||| ||||| ||||||||||||    
T  38401551 atcacacttattaagaaaactaaaacatagtagtttgtaacatatatagttttttgtgttatctttgaaataagttttatagg 38401469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 506
Target Start/End: Original strand, 20847235 - 20847297
Alignment:
Q  443 aaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| ||||||||||||||||||||||||  |||||||||||||| || || |||||| |||||    
T  20847235 aaaattaaaacataagaatttggagtata-atttttgtgttttctttggaataagtttcatagg 20847297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 505
Target Start/End: Original strand, 47443927 - 47444002
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||| ||||| || ||||||||    
T  47443927 cacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttatag 47444002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 483
Target Start/End: Original strand, 54725572 - 54725627
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||||||||||||||||||| || |||| | ||| |||| |||||||    
T  54725572 atcacacttattaagaaaactaaaacataggagtttgtaatattgtttcttgtgtt 54725627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 2994366 - 2994444
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||| |||  | |||| |  ||||||||||||||| |   ||||| ||||||||||||    
T  2994366 atcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgttatgcttgaaataagttttatagg 2994444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 10014436 - 10014358
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||  | |||| |  ||| || ||||| || ||| ||||| ||||||||||||    
T  10014436 atcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttatagg 10014358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 10252178 - 10252100
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||  | |||| |  ||| || ||||| || ||| ||||| ||||||||||||    
T  10252178 atcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttatagg 10252100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 11137638 - 11137588
Alignment:
Q  325 tggtgctaaataggtgaaacaccaatcattgtggatggtcttagttattta 375  Q
    ||||| ||||||||||||||||||||||| || |||||||| ||| |||||    
T  11137638 tggtgttaaataggtgaaacaccaatcatcgtagatggtctaagtgattta 11137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 22455967 - 22456037
Alignment:
Q  436 tattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||  | |||| |  |||||||||||||||  || ||||| ||||||||||||    
T  22455967 tattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttatagg 22456037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 504
Target Start/End: Original strand, 32619787 - 32619857
Alignment:
Q  435 ttattaagaaaactaa-aacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||  ||||| ||||||||||||||| | ||||||||||||| || || | ||||||||    
T  32619787 ttattaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttggaataggttttata 32619857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 17587865 - 17587794
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt-ttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||  |||||| | |||||||| || |||| |||| ||||| ||||||||||||    
T  17587865 ttattaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattct-tgaaataagttttatagg 17587794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 34195055 - 34195027
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  34195055 atcacacttattaagaaaactaaaacata 34195027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 45073463 - 45073411
Alignment:
Q  234 aaaaaatgaacagagagaaggtccttctataggcacccttctctataagcacc 286  Q
    |||||||||| ||| |||| |||||| || | |||||||||||||||||||||    
T  45073463 aaaaaatgaagagaaagaacgtccttatacatgcacccttctctataagcacc 45073411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 189 - 347
Target Start/End: Complemental strand, 30471599 - 30471442
Alignment:
Q  189 aacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaa 288  Q
    |||||||||| | |||||||| |||||||||||||||||||||| |||||||||| ||||| || ||| |||||||| ||||||| ||||||||||||||    
T  30471599 aacactcatt-tctttcattataaaatattaaatgaaattcacaaaaaaaatgaagagagaaaaagtcattctatagacacccttgtctataagcaccaa 30471501  T
Q  289 taaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacacc 347  Q
     |||||| | |||||||||||||| ||| |||| || |||| |||||||||||| ||||    
T  30471500 caaatatcacttcataatgggggttcctatttaactcggtgttaaataggtgaagcacc 30471442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 22832218 - 22832346
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || ||| ||||||||| ||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  22832218 ataactctatattattacatttctaaatcactcgttc-atttcaatagaaaatattaaatgaaatttacacaaaaaatgaagagagagaaggtccttcta 22832316  T
Q  263 taggcacccttctctataagcaccaataaa 292  Q
     || |||| |||||||||| ||||||||||    
T  22832317 cagacaccattctctataaacaccaataaa 22832346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 35517292 - 35517215
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  35517292 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatag 35517215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 12938411 - 12938333
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  12938411 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttatagg 12938333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 45085426 - 45085348
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  45085426 atcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttatagg 45085348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 22823417 - 22823545
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||| ||||| || ||| ||||| ||| ||||| || ||||||| ||||||||||||||||||||| |||||||||||||| |||||||  |||||||||    
T  22823417 ataattctatattattacatttcaaaatcactcgtt-tatttcaatagaaaatattaaatgaaatttacacaaaaaatgaagagagagactgtccttcta 22823515  T
Q  263 taggcacccttctctataagcaccaataaa 292  Q
    |||||||| |||||||||| ||||||||||    
T  22823516 taggcaccattctctataaacaccaataaa 22823545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 28599142 - 28599217
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  28599142 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttatagg 28599217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 6110190 - 6110268
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||    
T  6110190 atcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttatagg 6110268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 11617193 - 11617115
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  11617193 atcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttatagg 11617115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 19264269 - 19264191
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||    
T  19264269 atcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttatagg 19264191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 3201495 - 3201418
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||||||    
T  3201495 atcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatag 3201418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 245 - 365
Target Start/End: Complemental strand, 20379903 - 20379783
Alignment:
Q  245 agagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaac 344  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||| |||||||| | ||| | |||| ||  ||||||||||||||||||    
T  20379903 agagagaaggtccttctatagacactcttctctataagaaccaataaatatcagtccataatggagatgcttatttaactcagtgctaaataggtgaaac 20379804  T
Q  345 accaatcattgtggatggtct 365  Q
    | | | |||||||||||||||    
T  20379803 atccaccattgtggatggtct 20379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 45660537 - 45660456
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaat---ttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||    
T  45660537 atcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 45660456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 43415570 - 43415492
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  43415570 atcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttatagg 43415492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 9864709 - 9864782
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||    
T  9864709 atcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagttt 9864782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 35115794 - 35115851
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35115794 atcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttt 35115851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 33198624 - 33198700
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| | ||| ||||||||||||    
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttatagg 33198700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 429 - 485
Target Start/End: Complemental strand, 35023066 - 35023010
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtttt 35023010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 7645218 - 7645276
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 486  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  7645218 atcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttc 7645276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 25572214 - 25572142
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || || ||||||    
T  25572214 atcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagttt 25572142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 40808711 - 40808783
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || || ||||||    
T  40808711 atcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagttt 40808783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 20379996 - 20379927
Alignment:
Q  181 atttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagaga 251  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  20379996 atttctaaaatactcatt-tatttcattacaaagtattaaatgaaattcacacaaaaaatgaagagagaga 20379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 24204520 - 24204598
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||| |||||||||||||| ||||||||||||||||| ||| ||||||||||| || || ||||||||||||    
T  24204520 atcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttatagg 24204598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 28858481 - 28858401
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagta---tagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||| ||||||||||||||||||||||||||||  | ||   |||||||||||||||||| |||||||||||||||||    
T  28858481 atcacacatattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatag 28858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 493
Target Start/End: Complemental strand, 41528426 - 41528360
Alignment:
Q  428 atcacacttattaagaaaactaaaa-cataagaatttggagtatagttttttgtgttttctctgaaa 493  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| |||||    
T  41528426 atcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaa 41528360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 14874105 - 14874054
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttatagg 14874054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 6765924 - 6765982
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 486  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||    
T  6765924 atcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttc 6765982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 435 - 485
Target Start/End: Complemental strand, 44455151 - 44455101
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  44455151 ttattaagaaaactaaaatatatgaatttggagtatagttttttgtgtttt 44455101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 32010270 - 32010193
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||| |||||  | |||| | |||||||||||||||| ||| ||||| ||||||||||||    
T  32010270 tcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttatagg 32010193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 8701771 - 8701699
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||| |||||||||||||||||||||||| |||||| || |||||||||| |||||||| || || ||||||    
T  8701771 atcacgcttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagttt 8701699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 29524032 - 29524104
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||| |||||||||| |||||||||||| || ||| ||||||||||||||| || || ||||||    
T  29524032 atcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagttt 29524104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 487
Target Start/End: Complemental strand, 5963362 - 5963310
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||| |||||||||| |||| || |||||||||||||||    
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttct 5963310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 5280536 - 5280595
Alignment:
Q  443 aaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagtttt 501  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||    
T  5280536 aaaactaaaacataagaatttggactatagtttttttgtgttttcttgggaaaaagtttt 5280595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 463
Target Start/End: Original strand, 11825350 - 11825385
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaattt 463  Q
    ||||||||||||||||||||||||||||||||||||    
T  11825350 atcacacttattaagaaaactaaaacataagaattt 11825385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 473
Target Start/End: Complemental strand, 32428136 - 32428098
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagt 473  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  32428136 ttattaaaaaaactaaaacataagaatttggagtatagt 32428098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 30830594 - 30830659
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||| ||||||||||||| |||||||||   |||||||||||| | ||||| ||||||    
T  30830594 ttattaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttgaaataagttt 30830659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 33677652 - 33677595
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||| ||||||| |||||||||||||||| |||||| || |||||||||| ||||||    
T  33677652 atcacgcttattacgaaaactaaaacataaaaatttgaagaatagttttttatgtttt 33677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 480
Target Start/End: Original strand, 33932915 - 33932966
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgt 480  Q
    ||||||||||||||||||||||||||||  | |||| |||||| ||||||||    
T  33932915 tcacacttattaagaaaactaaaacatagtattttgtagtataattttttgt 33932966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 4707585 - 4707532
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttc 486  Q
    |||| |||||||||| |||||||||| |   ||||||||||||||||||||||||||    
T  4707585 cacatttattaagaacactaaaacatga---tttggagtatagttttttgtgttttc 4707532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 26998486 - 26998408
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||||||||||||   | |||| |  ||||||||||||||| ||| | ||| ||||||||||||    
T  26998486 atcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttatagg 26998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Original strand, 16492930 - 16492958
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  16492930 atcacacttattaagaaaactaaaacata 16492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 32406899 - 32406855
Alignment:
Q  326 ggtgctaaataggtgaaacaccaatcattgtggatggtcttagtt 370  Q
    ||||||||||||||||| |||| | ||||||||||| ||||||||    
T  32406899 ggtgctaaataggtgaagcacccaccattgtggatgctcttagtt 32406855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 163 - 308
Target Start/End: Complemental strand, 48261057 - 48260914
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||| || |||||||||    
T  48261057 ataactctatattattatatttctaaaacactcatt-tatttcattagaaaatattaaatgaaattcacac-ataaatgaaaagagataatgtccttcta 48260960  T
Q  263 taggcacccttctctataagcaccaataaatattagttcataatgg 308  Q
    ||  |||  |||||||||| ||||||||||||||||| ||| ||||    
T  48260959 taaacacttttctctataaacaccaataaatattagtccatgatgg 48260914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 163 - 368
Target Start/End: Complemental strand, 32474163 - 32473959
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || ||| |||||||||||||||||| ||||||| |  |||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||    
T  32474163 ataactctatattattacatttctaaaacactcatt-tatttcaatgaaaaatattaattgaaattcacacataaaatgaagagagagaaggtgcttata 32474065  T
Q  263 taggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatgg 362  Q
    || |||||||||||||||| ||||||||||||| | |  | |||||||||| || ||||||  | |||| || ||||||| || | | ||||| |||||     
T  32474064 taagcacccttctctataaacaccaataaatatcattctacaatgggggtgtctatttagcccgatgcttaacaggtgaagcatccaccattgcggatga 32473965  T
Q  363 tcttag 368  Q
    ||||||    
T  32473964 tcttag 32473959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 24190638 - 24190562
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  24190638 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata 24190562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 337
Target Start/End: Original strand, 27000995 - 27001150
Alignment:
Q  181 atttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctataggcacccttctctata 280  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || ||||| ||| |||||||  |||| |||||| ||    
T  27000995 atttctaaaacactcatt-tattccattagaaaatattaaatgaaatttacacaaaaaatgaagagggagaaagtcattctatatacaccattctcttta 27001093  T
Q  281 agcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaatag 337  Q
    ||||||||||||||| | |  | ||||||  ||| | |||||||||||||| |||||    
T  27001094 agcaccaataaatatcactctacaatgggattgcttatttagcttggtgcttaatag 27001150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 15959632 - 15959710
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  15959632 atcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagg 15959710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 32623997 - 32624075
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  32623997 atcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttatagg 32624075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 39555578 - 39555655
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  39555578 atcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatag 39555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 6787007 - 6786931
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  6787007 atcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttata 6786931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 17349911 - 17350042
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || ||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||| |||||||| |||||| |||| ||| ||    
T  17349911 ataactctatattattacatttctaaaacactcatt-tatttcattggaaaatattaattgaaattcagacataaaatgaagagagaggaggtgcttata 17350009  T
Q  263 taggcacccttctctataagcaccaataaatat 295  Q
     | |||||||||  |||||||||||||||||||    
T  17350010 catgcacccttccttataagcaccaataaatat 17350042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 33369719 - 33369643
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  33369719 atcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttata 33369643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 2126207 - 2126129
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  2126207 atcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttatagg 2126129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 430 - 504
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 11241196 - 11241118
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  11241196 atcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 11241118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 28016738 - 28016816
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||| ||||||||||    
T  28016738 atcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttatagg 28016816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 40718847 - 40718771
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  40718847 atcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttata 40718771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 35691561 - 35691484
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  35691561 atcacatttattaagaaa-ctaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagg 35691484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 45226307 - 45226229
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||| ||||||||||||||||||    
T  45226307 atcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttatagg 45226229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 428 - 496
Target Start/End: Original strand, 13136546 - 13136614
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaa 496  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  13136546 atcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttaaaaaaa 13136614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 428 - 504
Target Start/End: Original strand, 32742194 - 32742270
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  32742194 atcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttata 32742270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 52985102 - 52985030
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||    
T  52985102 atcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagttt 52985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 430 - 504
Target Start/End: Complemental strand, 6785622 - 6785549
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||    
T  6785622 cacacttattaagaaaactaaaacataagaa-ttggagtatagttttttgtgttttcttttgaaaaagttttata 6785549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 437 - 506
Target Start/End: Original strand, 12448969 - 12449037
Alignment:
Q  437 attaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12448969 attaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttatagg 12449037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 46543144 - 46543073
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  46543144 ttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttatagg 46543073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 46818497 - 46818572
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||    
T  46818497 acacttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttatagg 46818572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 33431728 - 33431650
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||||||| | | ||||||||||||||||    
T  33431728 atcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttatagg 33431650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 43667295 - 43667373
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| |||||||||||| ||| ||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||    
T  43667295 atcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttatagg 43667373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 428 - 504
Target Start/End: Original strand, 32983164 - 32983239
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| ||  ||||||||||||    
T  32983164 atcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttg-gaaaagttttata 32983239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 432 - 502
Target Start/End: Original strand, 7467958 - 7468029
Alignment:
Q  432 cacttattaagaaaactaaaacataagaatttggagt-atagttttttgtgttttctctgaaaaaagtttta 502  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| || |||||||||||    
T  7467958 cacttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagtttta 7468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 3874974 - 3875087
Alignment:
Q  391 tactccctccgtcctaaattataagcnnnnnnnnnntatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctg 490  Q
    ||||||||||||||||||||||||||           ||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||| | |     
T  3874974 tactccctccgtcctaaattataagccaaaaaaaaaaatcacacttattaagaaaagtaaaacataagaatttgaagtatag--ttttgtgttttttttt 3875071  T
Q  491 aaaaaagttttatagg 506  Q
     |||||||||||||||    
T  3875072 gaaaaagttttatagg 3875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 42965808 - 42965885
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| || ||||| |||||||||    
T  42965808 atcatacttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttatagg 42965885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 434 - 506
Target Start/End: Complemental strand, 1820578 - 1820505
Alignment:
Q  434 cttattaagaaaactaaaacataagaatttggagtatagtttt-ttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| | || |||||||||||||||    
T  1820578 cttattaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttatagg 1820505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 440 - 485
Target Start/End: Original strand, 39932576 - 39932621
Alignment:
Q  440 aagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgtttt 39932621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 47014487 - 47014561
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||| |||| |||||||||||||||||| |||||||  |||||||||||||||  ||||||||||||||||||    
T  47014487 cacacttactaagtaaactaaaacataagaatctggagta--gttttttgtgttttcgttgaaaaaagttttatagg 47014561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 24728618 - 24728678
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttct 487  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  24728618 atcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttct 24728678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 44148828 - 44148900
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||| || || ||||||    
T  44148828 atcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagttt 44148900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 3076464 - 3076389
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    ||||||||||||||||||| |||| |||||||||||| || ||||||||||||||||| | || || |||||||||    
T  3076464 atcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttat 3076389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 503
Target Start/End: Complemental strand, 30221893 - 30221819
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    ||||||| |||||||||| ||||||||||||| ||||| |||| ||||||||||||||| | ||| |||||||||    
T  30221893 tcacactaattaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttat 30221819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 492
Target Start/End: Original strand, 7875932 - 7875996
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaa 492  Q
    ||||||||||||||||||| ||||| |||| |||||| | |||||||||||||||||||| ||||    
T  7875932 atcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttctttgaa 7875996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 28120748 - 28120804
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||| |||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgtttt 28120804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 346
Target Start/End: Original strand, 9904144 - 9904324
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| |  ||| ||||| | |||||||||| ||||| |||| || ||||||||| ||||||||| ||||||| ||  |||||||  | ||||||    
T  9904144 ataactctatataattacatttcaacaacactcatt-tattttattacaatatattaaattaaattcacataaaaaattaagggagagaaaattcttcta 9904242  T
Q  263 taggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacac 346  Q
    ||| ||||||| | |||||||||||  |||||| | | || ||||||  ||||| ||||  ||| |||||||||||||||||||    
T  9904243 tagacacccttttatataagcaccac-aaatatcactccacaatggga-tgcctatttaatttgatgctaaataggtgaaacac 9904324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 448 - 506
Target Start/End: Original strand, 2246026 - 2246084
Alignment:
Q  448 taaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||| | ||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttgaaataagttttatagg 2246084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 45840058 - 45840136
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| | | ||||| | ||||||||||    
T  45840058 atcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttatagg 45840136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 1035024 - 1034951
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||| |||||||||||| |||||||||||||||||| ||||  | ||||||||||||| || || |||||||||    
T  1035024 atcacatttattaagaaaattaaaacataagaatttggcgtat--tgttttgtgttttctttggaataagttttat 1034951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 50012748 - 50012688
Alignment:
Q  428 atcacacttattaagaaaact-aaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||| |||| | |||| ||| ||||||||||||||||||||||||||||||    
T  50012748 atcacacttattaaaaaaaattaaaatataggaatttggagtatagttttttgtgttttct 50012688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 483
Target Start/End: Complemental strand, 7190824 - 7190770
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||| ||||||||||||| | ||||| ||||||||||| |||||||    
T  7190824 tcacacttattaaaaaaactaaaacatgataatttagagtatagtttcttgtgtt 7190770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 30701377 - 30701455
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| ||||||||||||||  | |||| |  ||| ||||||||||| ||| ||||| ||||||||||||    
T  30701377 atcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataagttttatagg 30701455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 50176691 - 50176613
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| ||| ||||| || |||||||||    
T  50176691 atcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttatagg 50176613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 47600030 - 47600078
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagtttttt 478  Q
    |||| ||||||| |||| |||||||||||||||| ||||||||||||||    
T  47600030 cacatttattaaaaaaattaaaacataagaatttagagtatagtttttt 47600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 51776609 - 51776541
Alignment:
Q  299 ttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    |||||||| ||| ||||| ||||   ||||||||||||||||||||||| | |||| ||||||||||||    
T  51776609 ttcataatagggttgcctatttaatgtggtgctaaataggtgaaacacccaccattatggatggtctta 51776541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 487
Target Start/End: Original strand, 3861699 - 3861746
Alignment:
Q  440 aagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||| |||||| |||||| |||||| ||||||||    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttct 3861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 25185295 - 25185374
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| ||||||||||||||||||||||||  | |||| |  |||| ||||||||||| ||| ||||| ||||||||||||    
T  25185295 atcatacttattaagaaaactaaaacatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttatagg 25185374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 464
Target Start/End: Original strand, 6304791 - 6304825
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttg 464  Q
    |||||||||||||||||||||||||||| ||||||    
T  6304791 cacacttattaagaaaactaaaacataataatttg 6304825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 7397875 - 7397797
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||| |||||||||| |||  | |||| |  ||||||||||||||| ||| ||||| || |||||||||    
T  7397875 atcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttatagg 7397797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 60
Target Start/End: Complemental strand, 14958103 - 14958073
Alignment:
Q  30 atagatgttgggtgctttaacatgctatatg 60  Q
    |||||||||||||||||||||||||||||||    
T  14958103 atagatgttgggtgctttaacatgctatatg 14958073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 47024438 - 47024349
Alignment:
Q  232 acaaaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgttta 321  Q
    |||||||||||||||||||| |||  |||||||| |||| ||||||||| ||| | ||| || ||| | || ||||| ||||||| ||||    
T  47024438 acaaaaaatgaacagagagagggtgtttctatagccacctttctctataggcatccatatattttactccacaatggaggtgcctattta 47024349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 500
Target Start/End: Original strand, 37735395 - 37735447
Alignment:
Q  448 taaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||| || ||||||||||||||| |||||| || || ||||||    
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttggaataagttt 37735447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 416
Target Start/End: Original strand, 44148787 - 44148815
Alignment:
Q  388 aattactccctccgtcctaaattataagc 416  Q
    |||||||||||||||||||||||||||||    
T  44148787 aattactccctccgtcctaaattataagc 44148815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 48379529 - 48379469
Alignment:
Q  308 ggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtcttag 368  Q
    ||||||||| ||||   |||||||||||||||||| |||| | ||||||||||||| ||||    
T  48379529 ggggtgcctatttaatgtggtgctaaataggtgaagcacccaccattgtggatggttttag 48379469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 427 - 506
Target Start/End: Original strand, 564 - 643
Alignment:
Q  427 tatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  564 tatcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagg 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 1987795 - 1987925
Alignment:
Q  166 actctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctatag 265  Q
    ||||||| |||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||| || ||||     
T  1987795 actctatattgttacatttataaaacacttatt-tatttcattagaaaatattaaatgaaatttacacaaacaatgaagagagagaaagtctttttataa 1987893  T
Q  266 gcacccttctctataagcaccaataaatatta 297  Q
    ||||| |||||||||| |||||||||||||||    
T  1987894 gcaccattctctataaacaccaataaatatta 1987925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 34425497 - 34425421
Alignment:
Q  430 cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagg 34425421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 428 - 504
Target Start/End: Complemental strand, 42273816 - 42273740
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttata 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  42273816 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata 42273740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 42698030 - 42697827
Alignment:
Q  163 ataactctattttgttatatttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttcta 262  Q
    |||||||||| || ||| |||||||||| ||||||| |||||||||  |||||||||| |||||| |||||| |||||||| |||||||| ||  || ||    
T  42698030 ataactctatattattacatttctaaaatactcatt-tatttcattgaaaaatattaattgaaatgcacacataaaatgaagagagagaaagtgtttata 42697932  T
Q  263 taggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatgg 362  Q
    ||| ||| |||||||||||||||||| |||||| | | || |||||  ||| || |||| |  | |||| ||||||||||||||| ||||||| ||||||    
T  42697931 tagtcactcttctctataagcaccaacaaatatcactccacaatggatgtgtctatttaacccgatgcttaataggtgaaacacccatcattgcggatgg 42697832  T
Q  363 tctta 367  Q
    |||||    
T  42697831 tctta 42697827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 20644183 - 20644105
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  20644183 atcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttatagg 20644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 367
Target Start/End: Original strand, 36972133 - 36972313
Alignment:
Q  181 atttctaaaacactcattatatttcattagaaaatattaaatgaaattcacacaaaaaatgaacagagagaaggtccttctataggcacccttctctata 280  Q
    |||||||||||||||||| ||||||||     |||||||||||||||||||||||||||     ||||||| ||||| | |||| |||||||||||||||    
T  36972133 atttctaaaacactcatt-tatttcat-----aatattaaatgaaattcacacaaaaaaaatgaagagagagggtccctatataagcacccttctctata 36972226  T
Q  281 agcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    ||||| ||||||||| | | |||||| ||||||  | |||| || |||| |||||||||||| |||  |||||||||||||||||||    
T  36972227 agcactaataaatatcactacataataggggtgtttatttaactcggtgttaaataggtgaagcactcatcattgtggatggtctta 36972313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 43589954 - 43590032
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  43589954 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagg 43590032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 20039270 - 20039193
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  20039270 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttatagg 20039193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 6686554 - 6686475
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctct-gaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  6686554 atcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttatagg 6686475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 37562753 - 37562832
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtg-ttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||||||||    
T  37562753 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttatagg 37562832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 11261876 - 11261954
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11261876 atcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttatagg 11261954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 439 - 506
Target Start/End: Original strand, 37522592 - 37522659
Alignment:
Q  439 taagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttatagg 37522659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 391 - 487
Target Start/End: Original strand, 12792741 - 12792837
Alignment:
Q  391 tactccctccgtcctaaattataagcnnnnnnnnnntatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    ||||||||||||||||||||||||||           |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  12792741 tactccctccgtcctaaattataagcaaaaaaaaaaaatcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttct 12792837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 9957427 - 9957485
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  9957427 atcacacttattaagaaaactaaaacatgagaatttggagtatag-tttttgtgttttct 9957485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 12729877 - 12729935
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  12729877 atcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttct 12729935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 494
Target Start/End: Complemental strand, 23233580 - 23233514
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaa 494  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  23233580 atcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaa 23233514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 32019980 - 32019931
Alignment:
Q  438 ttaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttct 32019931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 503
Target Start/End: Complemental strand, 19413303 - 19413235
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||||||||||||||  ||||||||||| || ||||||||||||||||||| ||||| |||||||||    
T  19413303 ttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttat 19413235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 25841033 - 25840961
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||||||||||||||||||||||| ||||| |||||| || ||||||||||||||||||| || || ||||||    
T  25841033 atcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagttt 25840961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 429 - 485
Target Start/End: Original strand, 30893243 - 30893299
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttt 30893299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 427 - 506
Target Start/End: Original strand, 38130105 - 38130186
Alignment:
Q  427 tatcacacttattaagaaaactaaaacataagaatttggagta---tagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||| |||||||||||||||||||||||||||||| ||   |||||||||||||||||| |  |||||||||||||||    
T  38130105 tatcacact-attaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttatagg 38130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 43454318 - 43454393
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||| ||  | ||||||||||||    
T  43454318 acacttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttatagg 43454393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 12912292 - 12912364
Alignment:
Q  433 acttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||| | | ||||| |||||||||||||||| ||| ||||| ||||||||||||    
T  12912292 acttattaagaaaactaaaacata-gtagttggaatatagttttttgtgttatctttgaaataagttttatagg 12912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 441 - 506
Target Start/End: Original strand, 41625517 - 41625581
Alignment:
Q  441 agaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||  | |||||||||||||||||||| ||||| |||||| |||||    
T  41625517 agaaaactaaaacataagaatttaaa-tatagttttttgtgttttctttgaaataagtttcatagg 41625581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 483
Target Start/End: Complemental strand, 32079670 - 32079618
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||| ||||    
T  32079670 acacttattaagaaaactaaaacattataatttggattatagttttttatgtt 32079618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 505
Target Start/End: Original strand, 5984126 - 5984177
Alignment:
Q  454 ataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||| ||||||||||||||||||||||| || || |||||||||||    
T  5984126 ataagaatttagagtatagttttttgtgttttctttggaataagttttatag 5984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 506
Target Start/End: Complemental strand, 8225608 - 8225553
Alignment:
Q  451 aacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| ||||||||||| ||||||||||||| |||||| || |||||||||||||||    
T  8225608 aacaaaagaatttggactatagttttttgtattttctttggaaaaagttttatagg 8225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 32111144 - 32111093
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||| |||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcatagg 32111093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 10568136 - 10568193
Alignment:
Q  236 aaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaat 293  Q
    ||||||||||||||||||||||||||| ||||| |||||||  |||| ||||| ||||    
T  10568136 aaaatgaacagagagaaggtccttctagaggcaaccttctcggtaagtaccaacaaat 10568193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 4463527 - 4463491
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttg 464  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4463527 atcacacttattaagaaaactaaagcataagaatttg 4463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 367
Target Start/End: Complemental strand, 23418989 - 23418857
Alignment:
Q  235 aaaaatgaacagagagaaggtccttctataggcacccttctctataagcaccaataaatattagttcataatgggggtgcctgtttagcttggtgctaaa 334  Q
    ||||||||| ||||||| ||| |||| |||| |||| ||||| |||  |||| ||| ||  || | || ||||||||||||| ||||    |||| ||||    
T  23418989 aaaaatgaatagagagagggtgcttccatagccaccattctccatagccacccatatattatactccacaatgggggtgcctatttaatacggtgttaaa 23418890  T
Q  335 taggtgaaacaccaatcattgtggatggtctta 367  Q
    ||| |||| |||| |||||||||||||||||||    
T  23418889 tagatgaagcacccatcattgtggatggtctta 23418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 24659989 - 24659946
Alignment:
Q  16 taggacaataagacatagatgttgggtgctttaacatgctatatg 60  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  24659989 taggacaatgagac-tagatgttgggtgctttaacatgctatatg 24659946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 503
Target Start/End: Original strand, 39505224 - 39505300
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatag-ttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||||||||||| |||| ||||  ||||||||||| || |||| ||||||||||||||| || || |||||||||    
T  39505224 atcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttat 39505300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 9622416 - 9622479
Alignment:
Q  304 aatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    |||||||||| || ||||   |||||||||||||||||| |||| | |||||||||||||||||    
T  9622416 aatgggggtgtctatttaatgtggtgctaaataggtgaagcacccaccattgtggatggtctta 9622479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 506
Target Start/End: Original strand, 16153353 - 16153416
Alignment:
Q  443 aaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||| | |||| |  ||||||||||||||| ||| ||||| ||||||||||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttatagg 16153416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 17351557 - 17351482
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||| |||||||||||||||| || ||| || ||||||||||||||||| | |||||  || || |||||||||    
T  17351557 atcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttat 17351482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 5736232 - 5736310
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| |||||||||  | |||| |  |||||||||| |||| ||| ||||| || |||||||||    
T  5736232 atcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttgaaataaattttatagg 5736310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 369
Target Start/End: Complemental strand, 19279464 - 19279423
Alignment:
Q  328 tgctaaataggtgaaacaccaatcattgtggatggtcttagt 369  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  19279464 tgctaaataggtgaagcacccaccattgtggatggtcttagt 19279423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 19764706 - 19764678
Alignment:
Q  28 acatagatgttgggtgctttaacatgcta 56  Q
    |||||||||||||||||||||||||||||    
T  19764706 acatagatgttgggtgctttaacatgcta 19764678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 6e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 21542587 - 21542509
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  21542587 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 21542509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 35129046 - 35129124
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  35129046 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 35129124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 11082240 - 11082315
Alignment:
Q  431 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  11082240 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagg 11082315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 34177633 - 34177711
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||  ||||||||    
T  34177633 atcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagg 34177711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 428 - 487
Target Start/End: Original strand, 17751736 - 17751795
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttct 487  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  17751736 atcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttct 17751795  T

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Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 428 - 500
Target Start/End: Original strand, 7274867 - 7274939
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| || || ||||||    
T  7274867 atcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagttt 7274939  T

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Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 3095719 - 3095789
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  3095719 ttattaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttg-gaaaagttttatagg 3095789  T

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Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 428 - 485
Target Start/End: Complemental strand, 9428914 - 9428857
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  9428914 atcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgtttt 9428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 428 - 501
Target Start/End: Original strand, 12461421 - 12461493
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagtttt 501  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |||||| ||||| |||||||    
T  12461421 atcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttt 12461493  T

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Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 30794191 - 30794262
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||| ||||||||||| |||||| |||||| |||||| | || || ||||||||||||    
T  30794191 ttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttatagg 30794262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 503
Target Start/End: Original strand, 14573120 - 14573194
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||  ||||||| |||||| ||||| |||| ||||    
T  14573120 atcacatttattaagaaaactaaaatatatgaatttggagtata-atttttgtattttctttgaaataagtattat 14573194  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 4032157 - 4032079
Alignment:
Q  428 atcacacttattaagaaaactaaaacata--ag-aatttggagtatagttttttgtgttttctctgaaaaaagttttat 503  Q
    |||||||||||||||||||||||||||||  || | |||| |  ||||||||||||||| ||| ||||| |||||||||    
T  4032157 atcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttat 4032079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 15489435 - 15489373
Alignment:
Q  304 aatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    ||||||||||||| ||||   ||||||||||||||||||||| |  ||||||||||||||||||    
T  15489435 aatgggggtgcctatttaatgtggtgctaaataggtgaaaca-ctctcattgtggatggtctta 15489373  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 483
Target Start/End: Original strand, 5121449 - 5121503
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 483  Q
    |||||||||||||||||||||| || |||  |||||  |||||||||||||||||    
T  5121449 tcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgtt 5121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 3888873 - 3888845
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  3888873 atcacacttattaagaaaactaaaacata 3888845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 505
Target Start/End: Original strand, 5822027 - 5822103
Alignment:
Q  429 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||||||||||||||||||||| || | | |||| |||||| ||| ||||||| ||| || || |||||| ||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatag 5822103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Original strand, 7359108 - 7359136
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  7359108 atcacacttattaagaaaactaaaacata 7359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 16524857 - 16524829
Alignment:
Q  428 atcacacttattaagaaaactaaaacata 456  Q
    |||||||||||||||||||||||||||||    
T  16524857 atcacacttattaagaaaactaaaacata 16524829  T

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Target: scaffold0045 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 78126 - 78048
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  78126 atcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtatagg 78048  T

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Target: scaffold0062 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 44763 - 44841
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||||||||||||||    
T  44763 atcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttatagg 44841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 10214 - 10136
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    |||| |||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |  |||||||||||||||    
T  10214 atcatacttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttatagg 10136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 1181 - 1104
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||| ||||||  |||||||||| |||| ||||||||||||||||||||||||||| | | |||||||||||||||    
T  1181 atcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatag 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 428 - 505
Target Start/End: Complemental strand, 9141 - 9064
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    |||||| ||||||  |||||||||| |||| ||||||||||||||||||||||||||| | | |||||||||||||||    
T  9141 atcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatag 9064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 71724 - 71785
Alignment:
Q  301 cataatgggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatgg 362  Q
    ||||||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  71724 cataatgtgggtgcctatttagtatggtgctaaataggtgaaacaccaatcattgtggatgg 71785  T

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Target: scaffold0009 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 500
Target Start/End: Complemental strand, 157963 - 157891
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttt 500  Q
    |||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || || ||||||    
T  157963 atcatacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagttt 157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 435 - 505
Target Start/End: Complemental strand, 155022 - 154953
Alignment:
Q  435 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatag 505  Q
    ||||||||||||||||||||||||||| || | ||||| ||||||| |||||| |||||||||||||||||    
T  155022 ttattaagaaaactaaaacataagaatctgaaatatag-tttttgtattttctttgaaaaaagttttatag 154953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 63173 - 63145
Alignment:
Q  28 acatagatgttgggtgctttaacatgcta 56  Q
    |||||||||||||||||||||||||||||    
T  63173 acatagatgttgggtgctttaacatgcta 63145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 506
Target Start/End: Original strand, 3447 - 3498
Alignment:
Q  455 taagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagg 3498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 506
Target Start/End: Original strand, 5867 - 5945
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| |||||||||  | |||| | |||||||||||||||| ||  ||||| ||||||||||||    
T  5867 atcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttatagg 5945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 3337 - 3259
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctctgaaaaaagttttatagg 506  Q
    ||||||||||||||||||| |||||||||  | |||| |  ||||||||||||||| ||| ||||| ||||||||||||    
T  3337 atcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttatagg 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 428340 - 428281
Alignment:
Q  308 ggggtgcctgtttagcttggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    ||||||||| ||||   |||||||||||||||||| |||| | |||||||||||||||||    
T  428340 ggggtgcctatttaatctggtgctaaataggtgaagcacccaccattgtggatggtctta 428281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 2819 - 2861
Alignment:
Q  325 tggtgctaaataggtgaaacaccaatcattgtggatggtctta 367  Q
    ||||||||||||||||||||||| | |||||||| ||||||||    
T  2819 tggtgctaaataggtgaaacacccaccattgtggttggtctta 2861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 233479 - 233536
Alignment:
Q  428 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 485  Q
    |||||| |||||||||||||||||| ||||||||||    ||||||| ||||||||||    
T  233479 atcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttt 233536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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