View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18125_low_25 (Length: 281)
Name: NF18125_low_25
Description: NF18125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18125_low_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 7 - 281
Target Start/End: Original strand, 38313720 - 38313994
Alignment:
| Q |
7 |
tccaagaatattcatatgataaaatatgattagatacatgtaaaaaaggtatacaccaacagtatatgtaacttaaatctataagttagattgtaggttg |
106 |
Q |
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| T |
38313720 |
tccaaaaatattcatatgataaaatatgattagatacatgtaaaaaaggtatacaccaacagtacatgtaacttaaatctataagttagattgtaggttg |
38313819 |
T |
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| Q |
107 |
agttaaaaatgcaaaatatatatgcacaaattcaaaccaaatgcatgattttatatagtcattgatgaaccaaataaattgtcatattatcagaagaaga |
206 |
Q |
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| T |
38313820 |
agttaaaaatgcaaaatatatatgcacaaattcaaaccaaatgcatgattttatatagtcattgatgaaccaaataaattgtcatattatcaaaagaaga |
38313919 |
T |
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| Q |
207 |
ttttaagtaacaaaatgagaagattaaataattctgagaacataccgctaacaaaggcacaactcaatccaacgg |
281 |
Q |
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| T |
38313920 |
ttttaagtaacaaaatgagaagaaaaaataattctgagaacataccgctaacaaaggcacaactcaatccaacgg |
38313994 |
T |
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