View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18127_high_5 (Length: 552)

Name: NF18127_high_5
Description: NF18127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18127_high_5
NF18127_high_5
[»] chr8 (48 HSPs)
chr8 (1-527)||(32767307-32767833)
chr8 (56-213)||(32927867-32928022)
chr8 (56-213)||(16972019-16972174)
chr8 (173-241)||(22936790-22936860)
chr8 (173-241)||(40742166-40742236)
chr8 (92-213)||(35495001-35495120)
chr8 (141-213)||(2764424-2764494)
chr8 (55-207)||(4950458-4950607)
chr8 (169-213)||(440216-440260)
chr8 (91-166)||(13384654-13384729)
chr8 (171-214)||(15206736-15206779)
chr8 (91-166)||(26100146-26100221)
chr8 (91-213)||(38335816-38335936)
chr8 (130-195)||(35495309-35495372)
chr8 (182-241)||(36108645-36108706)
chr8 (90-190)||(4662881-4662979)
chr8 (177-241)||(38152172-38152237)
chr8 (168-225)||(6399121-6399180)
chr8 (130-166)||(14382445-14382481)
chr8 (169-213)||(19649224-19649268)
chr8 (173-213)||(43550933-43550973)
chr8 (1-40)||(8027710-8027749)
chr8 (1-40)||(11038106-11038145)
chr8 (174-213)||(31246342-31246381)
chr8 (216-267)||(33733148-33733199)
chr8 (130-211)||(37158634-37158714)
chr8 (1-40)||(39648267-39648306)
chr8 (149-199)||(43492206-43492254)
chr8 (81-211)||(32994197-32994327)
chr8 (130-164)||(35064461-35064495)
chr8 (175-241)||(3097203-3097271)
chr8 (175-241)||(3467577-3467645)
chr8 (180-213)||(10552936-10552969)
chr8 (209-254)||(18355747-18355792)
chr8 (175-241)||(25697957-25698024)
chr8 (182-232)||(30759311-30759363)
chr8 (81-166)||(38868498-38868583)
chr8 (171-212)||(38875211-38875252)
chr8 (175-232)||(4941787-4941846)
chr8 (229-265)||(9695368-9695404)
chr8 (130-166)||(9695440-9695476)
chr8 (173-213)||(25497734-25497773)
chr8 (173-213)||(28425499-28425539)
chr8 (121-212)||(32809747-32809836)
chr8 (164-212)||(37061296-37061344)
chr8 (173-213)||(40742322-40742362)
chr8 (173-213)||(41289085-41289125)
chr8 (56-164)||(44141052-44141160)
[»] chr4 (61 HSPs)
chr4 (141-266)||(33843771-33843896)
chr4 (81-197)||(8604593-8604707)
chr4 (111-239)||(41751199-41751327)
chr4 (134-213)||(55927725-55927802)
chr4 (173-241)||(39636804-39636874)
chr4 (173-241)||(46830066-46830136)
chr4 (168-232)||(49136536-49136602)
chr4 (108-166)||(4243414-4243472)
chr4 (175-242)||(48550423-48550492)
chr4 (56-184)||(32818354-32818480)
chr4 (171-212)||(54487248-54487289)
chr4 (173-213)||(6138647-6138687)
chr4 (130-213)||(22683913-22683994)
chr4 (130-213)||(25319097-25319178)
chr4 (98-224)||(25927325-25927447)
chr4 (176-241)||(48550239-48550306)
chr4 (173-241)||(16566324-16566394)
chr4 (173-241)||(26651845-26651915)
chr4 (173-241)||(43772120-43772190)
chr4 (173-241)||(49519749-49519819)
chr4 (175-266)||(36150625-36150718)
chr4 (171-213)||(41866171-41866213)
chr4 (108-191)||(10185221-10185303)
chr4 (171-212)||(15619631-15619672)
chr4 (175-241)||(42944895-42944963)
chr4 (178-239)||(4954050-4954113)
chr4 (144-211)||(17898085-17898150)
chr4 (173-213)||(19592258-19592298)
chr4 (209-264)||(20911786-20911842)
chr4 (140-224)||(22250285-22250369)
chr4 (130-166)||(32100341-32100377)
chr4 (173-213)||(46926067-46926107)
chr4 (130-193)||(47144263-47144324)
chr4 (172-211)||(14076033-14076072)
chr4 (169-241)||(14564143-14564217)
chr4 (1-40)||(19067342-19067381)
chr4 (169-261)||(22980679-22980773)
chr4 (173-241)||(25312734-25312804)
chr4 (173-212)||(29149335-29149374)
chr4 (110-196)||(35065092-35065176)
chr4 (134-196)||(36639848-36639908)
chr4 (173-241)||(51922959-51923029)
chr4 (173-241)||(54150545-54150615)
chr4 (173-232)||(13167544-13167605)
chr4 (94-211)||(33560527-33560642)
chr4 (1-39)||(55085125-55085163)
chr4 (171-213)||(56241862-56241904)
chr4 (176-213)||(2175174-2175211)
chr4 (168-213)||(8754172-8754216)
chr4 (175-212)||(14054872-14054909)
chr4 (172-213)||(16492945-16492986)
chr4 (201-242)||(45694716-45694757)
chr4 (217-261)||(17897799-17897843)
chr4 (176-241)||(19599493-19599559)
chr4 (169-213)||(22699757-22699801)
chr4 (169-213)||(22994316-22994360)
chr4 (1-45)||(49138952-49138996)
chr4 (56-164)||(50061630-50061738)
chr4 (1-37)||(50358139-50358175)
chr4 (173-213)||(53914918-53914957)
chr4 (173-213)||(55638782-55638822)
[»] chr7 (38 HSPs)
chr7 (108-266)||(27571889-27572047)
chr7 (61-213)||(40491558-40491708)
chr7 (107-263)||(38123569-38123725)
chr7 (133-234)||(40561690-40561791)
chr7 (107-247)||(45557391-45557531)
chr7 (176-241)||(32186998-32187065)
chr7 (173-241)||(3622444-3622514)
chr7 (173-232)||(3750741-3750802)
chr7 (130-190)||(22310437-22310495)
chr7 (173-213)||(37562625-37562665)
chr7 (176-241)||(41715715-41715782)
chr7 (173-241)||(48459765-48459835)
chr7 (2-166)||(597946-598105)
chr7 (169-248)||(29829287-29829368)
chr7 (57-151)||(30182311-30182404)
chr7 (140-246)||(33853404-33853510)
chr7 (171-213)||(38230121-38230163)
chr7 (217-263)||(40491728-40491774)
chr7 (175-241)||(24770895-24770963)
chr7 (209-266)||(42481776-42481833)
chr7 (173-213)||(3342845-3342885)
chr7 (169-213)||(15311230-15311274)
chr7 (176-241)||(47217525-47217592)
chr7 (173-241)||(10371942-10372012)
chr7 (1-40)||(38123770-38123809)
chr7 (174-213)||(42752205-42752244)
chr7 (1-40)||(45004909-45004948)
chr7 (138-269)||(48968136-48968267)
chr7 (174-261)||(1766481-1766570)
chr7 (140-242)||(17111904-17112006)
chr7 (128-213)||(32938639-32938724)
chr7 (4-46)||(41788245-41788287)
chr7 (173-232)||(44967392-44967453)
chr7 (108-213)||(12306748-12306853)
chr7 (167-212)||(18350120-18350165)
chr7 (173-213)||(32205980-32206020)
chr7 (173-213)||(39391151-39391191)
chr7 (130-213)||(44570695-44570776)
[»] chr3 (57 HSPs)
chr3 (90-266)||(51285579-51285755)
chr3 (108-266)||(46853435-46853592)
chr3 (108-212)||(35264367-35264469)
chr3 (107-213)||(37334989-37335093)
chr3 (55-244)||(36302157-36302348)
chr3 (173-241)||(3348277-3348347)
chr3 (107-213)||(3776548-3776652)
chr3 (169-261)||(7012670-7012764)
chr3 (141-223)||(51667195-51667277)
chr3 (173-213)||(53179882-53179922)
chr3 (173-241)||(21225024-21225094)
chr3 (108-213)||(30958063-30958167)
chr3 (108-213)||(30973875-30973979)
chr3 (173-241)||(31084241-31084311)
chr3 (173-241)||(38172304-38172374)
chr3 (173-241)||(50664792-50664862)
chr3 (175-213)||(19877453-19877491)
chr3 (174-241)||(23496352-23496421)
chr3 (99-191)||(33791982-33792073)
chr3 (175-213)||(38340841-38340879)
chr3 (175-213)||(40415323-40415361)
chr3 (131-195)||(38332527-38332589)
chr3 (107-207)||(41596110-41596208)
chr3 (169-239)||(49526668-49526740)
chr3 (130-181)||(190875-190924)
chr3 (173-213)||(4984615-4984655)
chr3 (177-213)||(16246121-16246157)
chr3 (130-197)||(27266765-27266830)
chr3 (168-241)||(44224791-44224866)
chr3 (90-166)||(52364060-52364136)
chr3 (112-202)||(2076485-2076573)
chr3 (1-40)||(3845234-3845273)
chr3 (174-213)||(15511403-15511442)
chr3 (173-212)||(26519698-26519737)
chr3 (107-213)||(31708194-31708298)
chr3 (107-197)||(35253438-35253526)
chr3 (108-186)||(40147832-40147908)
chr3 (152-246)||(42484420-42484513)
chr3 (209-252)||(44771870-44771913)
chr3 (173-241)||(48189439-48189508)
chr3 (171-213)||(34561140-34561182)
chr3 (175-213)||(42644298-42644336)
chr3 (171-213)||(48089645-48089687)
chr3 (178-241)||(52966806-52966871)
chr3 (175-241)||(10853264-10853332)
chr3 (108-164)||(35058388-35058445)
chr3 (141-213)||(41591308-41591378)
chr3 (171-241)||(44939413-44939484)
chr3 (1-46)||(52925727-52925772)
chr3 (1-45)||(21007758-21007802)
chr3 (173-213)||(23207095-23207135)
chr3 (209-269)||(24916626-24916686)
chr3 (130-166)||(37703148-37703184)
chr3 (165-213)||(38626738-38626786)
chr3 (134-189)||(43661892-43661945)
chr3 (130-197)||(43965683-43965748)
chr3 (173-213)||(52931599-52931639)
[»] chr6 (38 HSPs)
chr6 (1-234)||(34620810-34621039)
chr6 (1-234)||(34748247-34748476)
chr6 (58-259)||(434143-434345)
chr6 (130-232)||(882735-882837)
chr6 (108-191)||(1485123-1485204)
chr6 (81-191)||(4910908-4911016)
chr6 (108-189)||(31305826-31305905)
chr6 (173-241)||(6208060-6208129)
chr6 (108-166)||(34027417-34027475)
chr6 (56-213)||(2234490-2234644)
chr6 (130-213)||(7486479-7486560)
chr6 (173-213)||(16548173-16548213)
chr6 (175-239)||(26492623-26492687)
chr6 (169-213)||(29240407-29240451)
chr6 (173-213)||(29409278-29409318)
chr6 (81-137)||(30927043-30927099)
chr6 (91-191)||(6653822-6653924)
chr6 (173-241)||(16442347-16442417)
chr6 (138-196)||(32888929-32888985)
chr6 (173-241)||(33899002-33899072)
chr6 (1-40)||(33997122-33997161)
chr6 (171-266)||(3809718-3809815)
chr6 (171-266)||(28466884-28466981)
chr6 (171-266)||(34736752-34736849)
chr6 (176-239)||(34800742-34800807)
chr6 (128-233)||(34063359-34063464)
chr6 (81-196)||(957595-957708)
chr6 (154-213)||(1499973-1500030)
chr6 (169-266)||(3798986-3799085)
chr6 (107-214)||(10874234-10874339)
chr6 (136-187)||(12766640-12766689)
chr6 (107-178)||(17225878-17225947)
chr6 (180-241)||(17829995-17830058)
chr6 (173-213)||(21254906-21254945)
chr6 (101-161)||(25195870-25195930)
chr6 (174-239)||(29682202-29682269)
chr6 (140-188)||(33136460-33136508)
chr6 (169-213)||(33997282-33997326)
[»] chr2 (57 HSPs)
chr2 (131-212)||(15220817-15220896)
chr2 (131-234)||(7629919-7630021)
chr2 (81-166)||(42740977-42741062)
chr2 (90-210)||(44439263-44439381)
chr2 (130-233)||(1976797-1976900)
chr2 (169-240)||(3853939-3854012)
chr2 (108-269)||(3476326-3476487)
chr2 (126-213)||(16518823-16518908)
chr2 (59-234)||(30503187-30503360)
chr2 (176-240)||(10918649-10918715)
chr2 (173-240)||(38600439-38600508)
chr2 (137-213)||(4908846-4908920)
chr2 (1-46)||(42774951-42774996)
chr2 (173-213)||(9988526-9988566)
chr2 (107-182)||(42982570-42982643)
chr2 (173-241)||(1945034-1945104)
chr2 (173-241)||(5916237-5916306)
chr2 (173-241)||(26207924-26207994)
chr2 (81-191)||(33019133-33019241)
chr2 (110-213)||(33502266-33502364)
chr2 (173-241)||(36312320-36312389)
chr2 (215-266)||(42741091-42741142)
chr2 (107-233)||(4894090-4894216)
chr2 (175-213)||(16467131-16467169)
chr2 (175-213)||(31224725-31224763)
chr2 (173-232)||(41580714-41580775)
chr2 (174-232)||(28261338-28261398)
chr2 (209-266)||(37745784-37745841)
chr2 (130-213)||(7632818-7632899)
chr2 (169-213)||(23359955-23359999)
chr2 (169-213)||(23377543-23377587)
chr2 (130-213)||(32307133-32307214)
chr2 (173-213)||(34433331-34433371)
chr2 (173-212)||(2213549-2213588)
chr2 (173-241)||(7295343-7295413)
chr2 (173-241)||(8170356-8170425)
chr2 (173-241)||(25747877-25747946)
chr2 (173-212)||(28127313-28127352)
chr2 (1-40)||(37420319-37420358)
chr2 (143-189)||(40401622-40401666)
chr2 (173-232)||(7296198-7296259)
chr2 (175-213)||(27911451-27911489)
chr2 (130-164)||(32798510-32798544)
chr2 (174-241)||(36548243-36548312)
chr2 (175-213)||(42089553-42089591)
chr2 (173-232)||(45714672-45714733)
chr2 (173-231)||(2215295-2215355)
chr2 (210-266)||(680177-680233)
chr2 (168-212)||(11240709-11240753)
chr2 (210-246)||(11650677-11650713)
chr2 (130-162)||(13475924-13475956)
chr2 (1-45)||(15928551-15928595)
chr2 (173-213)||(30007578-30007618)
chr2 (174-239)||(30599901-30599968)
chr2 (121-165)||(37420196-37420240)
chr2 (168-212)||(39106695-39106739)
chr2 (210-242)||(42650398-42650430)
[»] scaffold0361 (1 HSPs)
scaffold0361 (107-207)||(14075-14173)
[»] chr1 (66 HSPs)
chr1 (150-270)||(34915135-34915255)
chr1 (176-266)||(47978334-47978426)
chr1 (107-186)||(3016188-3016265)
chr1 (214-266)||(14644854-14644906)
chr1 (173-241)||(20800275-20800345)
chr1 (173-241)||(31223432-31223502)
chr1 (173-241)||(35569200-35569270)
chr1 (173-241)||(42850217-42850287)
chr1 (140-254)||(6932096-6932210)
chr1 (90-232)||(28287267-28287412)
chr1 (217-266)||(40662891-40662940)
chr1 (90-189)||(1514352-1514449)
chr1 (173-213)||(5410697-5410737)
chr1 (90-197)||(7524122-7524227)
chr1 (173-213)||(15884285-15884325)
chr1 (176-241)||(27801650-27801717)
chr1 (109-183)||(213522-213594)
chr1 (90-180)||(11049259-11049347)
chr1 (91-191)||(30557514-30557610)
chr1 (142-207)||(48548975-48549038)
chr1 (130-239)||(50845207-50845315)
chr1 (147-199)||(213250-213300)
chr1 (141-213)||(5268279-5268349)
chr1 (174-224)||(29759710-29759762)
chr1 (173-213)||(1199885-1199925)
chr1 (130-189)||(1233354-1233411)
chr1 (169-213)||(4347028-4347072)
chr1 (90-197)||(6021813-6021914)
chr1 (173-213)||(12468270-12468310)
chr1 (176-241)||(26058302-26058369)
chr1 (22-161)||(32088580-32088713)
chr1 (150-213)||(35961437-35961498)
chr1 (138-213)||(44786873-44786946)
chr1 (173-213)||(48510966-48511006)
chr1 (171-232)||(49242989-49243052)
chr1 (130-189)||(52263626-52263683)
chr1 (1-40)||(8381908-8381947)
chr1 (107-166)||(10324938-10324997)
chr1 (173-241)||(10470648-10470717)
chr1 (3-46)||(37131860-37131903)
chr1 (173-241)||(47123444-47123514)
chr1 (178-241)||(7826352-7826417)
chr1 (140-213)||(34571138-34571209)
chr1 (140-213)||(34875044-34875115)
chr1 (217-266)||(7524263-7524312)
chr1 (174-224)||(7765298-7765350)
chr1 (55-164)||(7790644-7790753)
chr1 (134-221)||(24587965-24588051)
chr1 (56-225)||(28083830-28083998)
chr1 (179-212)||(32365143-32365176)
chr1 (175-241)||(43728876-43728943)
chr1 (209-246)||(47899395-47899432)
chr1 (209-265)||(3515949-3516005)
chr1 (178-239)||(4369803-4369865)
chr1 (140-191)||(7930984-7931033)
chr1 (173-213)||(11051339-11051379)
chr1 (173-213)||(12247478-12247517)
chr1 (142-213)||(18325063-18325132)
chr1 (173-213)||(23628734-23628773)
chr1 (174-239)||(25061285-25061352)
chr1 (130-166)||(27500334-27500370)
chr1 (137-212)||(27962072-27962145)
chr1 (169-213)||(33693088-33693132)
chr1 (173-213)||(34718509-34718549)
chr1 (173-213)||(40229498-40229538)
chr1 (130-213)||(48832939-48833020)
[»] chr5 (38 HSPs)
chr5 (130-207)||(4306561-4306636)
chr5 (140-247)||(10372957-10373062)
chr5 (173-241)||(22482237-22482307)
chr5 (217-266)||(9818870-9818919)
chr5 (90-242)||(18637293-18637444)
chr5 (173-213)||(40495382-40495422)
chr5 (173-241)||(3667902-3667972)
chr5 (121-199)||(8591521-8591597)
chr5 (193-261)||(9952540-9952610)
chr5 (173-241)||(41834940-41835010)
chr5 (1-46)||(3043120-3043165)
chr5 (130-210)||(10898770-10898847)
chr5 (173-213)||(9275508-9275548)
chr5 (169-213)||(22811070-22811114)
chr5 (130-213)||(35138978-35139059)
chr5 (177-213)||(40885263-40885299)
chr5 (173-241)||(4292197-4292267)
chr5 (130-199)||(7925435-7925501)
chr5 (173-241)||(8049045-8049115)
chr5 (1-40)||(13224740-13224779)
chr5 (173-241)||(23914248-23914318)
chr5 (173-212)||(35760237-35760276)
chr5 (125-187)||(37886019-37886079)
chr5 (76-191)||(38845438-38845552)
chr5 (173-241)||(39987961-39988031)
chr5 (175-213)||(2483738-2483776)
chr5 (81-213)||(6951260-6951390)
chr5 (1-38)||(15368167-15368204)
chr5 (174-224)||(19204015-19204067)
chr5 (174-224)||(32560284-32560336)
chr5 (211-266)||(117384-117437)
chr5 (173-213)||(7178826-7178865)
chr5 (81-164)||(9818734-9818818)
chr5 (173-213)||(10058122-10058162)
chr5 (1-45)||(11911926-11911970)
chr5 (217-261)||(17741949-17741993)
chr5 (176-241)||(24045881-24045948)
chr5 (1-45)||(39097188-39097232)
[»] scaffold0014 (1 HSPs)
scaffold0014 (173-213)||(118437-118477)
[»] scaffold0369 (1 HSPs)
scaffold0369 (173-213)||(8483-8523)
[»] scaffold0005 (1 HSPs)
scaffold0005 (169-241)||(253158-253232)
[»] scaffold0024 (1 HSPs)
scaffold0024 (92-213)||(23548-23667)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-45)||(31750-31794)


Alignment Details
Target: chr8 (Bit Score: 459; Significance: 0; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 1 - 527
Target Start/End: Original strand, 32767307 - 32767833
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttgcctggccttaagtagaattgatattcccttcaaagttgattatgcttgaagctaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32767307 aaattgattctagagatatagaattgattttgacatgtttcgttgcctggccttaagtagaattgatattcccttcaaagttgattatgcttgaagctaa 32767406  T
Q  101 gattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32767407 gattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacatgaatgtatccaaacataaatcaatttacatc 32767506  T
Q  201 caactcacttttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacaccaaggttttatatccattatcctacaacttgtgt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32767507 caactcacttttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacaccaaggttttatatccattatcctacaacttgtgt 32767606  T
Q  301 tcaaaatttaaatactacatggtccaatttacaacattacccctaaaccgtacctacttatcaataaactaggagccatatccaacagtaaaatgcttgc 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  32767607 tcaaaatttaaatactacatggtccaatttacaacattacccctaaacagtacctacttatcaataaagtacgagccatatccaacagtaaaatgcttgc 32767706  T
Q  401 caatagattcatataagtaacgaatattttgctgactttattaaaacaccaaaatgtacatcataannnnnnnnnnnnnnnncagcataattcaccataa 500  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||                ||||||||||||||||||    
T  32767707 caatagattcatataagtaacgaatattttgccgactttattaaaacaccaaaatgtacatcataattttcctttttattttcagcataattcaccataa 32767806  T
Q  501 actatgatagttgataactaactcctt 527  Q
    |||||||||||||||||||||||||||    
T  32767807 actatgatagttgataactaactcctt 32767833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 32927867 - 32928022
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaac 155  Q
    |||||||||||| || |||  | |||||||| | |||||||||| ||||  ||||||||||||  |||| | | ||||||||  |||||||| |||||||    
T  32927867 agtagaattgattttgcctcaatagttgattctacttgaagctaggatttgtagcttttgattatagaattcatttttacacacaaatttatagttcaac 32927966  T
Q  156 tcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||  |||||||||||||||| |||||| ||| | | ||||||| |||||    
T  32927967 tcacttttaca--tgaatgtatccaaacacaaatcactttgccttcaactcaatttta 32928022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 16972174 - 16972019
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaac 155  Q
    |||||||||||| || |||||| |||||||| |  |||||||||  |||  ||| |||| |||  |||| ||| ||||| ||  |||||||||||||||     
T  16972174 agtagaattgattttgccttcagagttgattgtatttgaagctagaatttgtagtttttaattttagaattgatttttaaacacaaatttattgttcaaa 16972075  T
Q  156 tcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||  ||||||||| |||||| |||||| ||||| | |||||||||||||    
T  16972074 tcacttttaca--tgaatgtattcaaacacaaatcattttaccttcaactcactttta 16972019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 22936860 - 22936790
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| ||||||||    
T  22936860 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattct 22936790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 40742166 - 40742236
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  40742166 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 35495001 - 35495120
Alignment:
Q  92 tgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatca 191  Q
    |||||||| ||||  ||||||||||||| |||| ||  ||||||||  |||| ||| |||||||| |||||||||  ||||| |||||||||| ||||||    
T  35495001 tgaagctaggatttgtagcttttgattctagaattgttttttacacacaaatctatagttcaacttacttttaca--tgaatatatccaaacacaaatca 35495098  T
Q  192 atttacatccaactcactttta 213  Q
     |||| || |||| ||||||||    
T  35495099 ctttatattcaacccactttta 35495120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 2764494 - 2764424
Alignment:
Q  141 aatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||| |||||||||||||||||  ||||||||||||||| |||||||| |||| || ||||| |||||||    
T  2764494 aatttatggttcaactcacttttac--gtgaatgtatccaaatataaatcactttatattcaacttactttta 2764424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 4950458 - 4950607
Alignment:
Q  55 aagtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaa 154  Q
    ||||||||||||| || |||  ||| |||||||  ||||||||||  | || |||||| ||||||  ||| | | ||||||||||||||||||| |||||    
T  4950458 aagtagaattgattttgcctcaaaaattgattagacttgaagctagcaatc-tagcttatgattcttgaattaatttttacacttaaatttatttttcaa 4950556  T
Q  155 ctcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    ||||||||  | | | ||| ||||||||||||||||| ||||| | |||||||    
T  4950557 ctcacttt--ctcataaatatatccaaacataaatcactttaccttcaactca 4950607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 440260 - 440216
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||    
T  440260 tgaatgtatccaaacataaatcaattcacatccaactcacattta 440216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 13384729 - 13384654
Alignment:
Q  91 ttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||||||| |||  ||||||||||||| |||| ||| ||| ||||  |||||||| ||||||||||||||||||    
T  13384729 ttgaagctaaaatttgtagcttttgattctagaattgattttcacacacaaatttatagttcaactcacttttaca 13384654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 15206736 - 15206779
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcacttttac 214  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  15206736 aatgtatccaaacataaatcaattcacattcaactcacttttac 15206779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 26100221 - 26100146
Alignment:
Q  91 ttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    ||||||||| ||||  ||||||||||||| | || ||| ||||||||  |||||||| ||||||||||||||||||    
T  26100221 ttgaagctaggatttgtagcttttgattctataattgatttttacacacaaatttatggttcaactcacttttaca 26100146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 38335936 - 38335816
Alignment:
Q  91 ttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatc 190  Q
    ||||||||||||||  | ||||||||||  |||| ||| |||||| |  ||||||||  |  ||||||||||||||  ||||||||||| |||| |||||    
T  38335936 ttgaagctaagatttgttgcttttgattttagaattgatttttacgcacaaatttatattctaactcacttttaca--tgaatgtatccgaacacaaatc 38335839  T
Q  191 aatttacatccaactcactttta 213  Q
    |||| || | |||||||||||||    
T  38335838 aattcaccttcaactcactttta 38335816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 35495309 - 35495372
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaattt 195  Q
    ||||| ||| ||||||||||||||| |||||||||    |||||||||||||||||||||||||||    
T  35495309 ttttatactcaaatttattgttcaaatcacttttatt--tgaatgtatccaaacataaatcaattt 35495372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 36108645 - 36108706
Alignment:
Q  182 acataaatcaatttacatccaactcacttttacat--aatcaattcactcaaaattaattct 241  Q
    |||||||||| |||||||  |||| ||||||||||  |||||||||||||||||||||||||    
T  36108645 acataaatcattttacattaaacttacttttacatgcaatcaattcactcaaaattaattct 36108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 4662979 - 4662881
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    |||||||||| ||||  ||||||||| ||| |||| ||| ||||||||  |||| ||| ||||||||| ||||| |  ||||||||||||||||| ||||    
T  4662979 cttgaagctaggatttgtagcttttgtttctagaattgatttttacacacaaatgtatagttcaactcgcttttcc--gtgaatgtatccaaacacaaat 4662882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 38152237 - 38152172
Alignment:
Q  177 tccaaacataaatcaatttacatccaactcacttttac-ataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||||| |||||||||| || | ||||||||  |||||| ||||||||    
T  38152237 tccaaacataaatcaatttacatcaaactcactttaactaaaatcaattttctcaaacttaattct 38152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 6399180 - 6399121
Alignment:
Q  168 gtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattc 225  Q
    |||| |||||| ||||||||||||||| ||||| ||||||||||||  ||||||||||||    
T  6399180 gtgagtgtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattc 6399121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 14382445 - 14382481
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14382445 ttttacactttaatttattgttcaactcacttttaca 14382481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 19649224 - 19649268
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  19649224 tgaaggtatccaaacataaatcactttacattcaactcactttta 19649268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 43550933 - 43550973
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  43550933 tgtatccaaacataaatcaattcacattcaactcactttta 43550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8027710 - 8027749
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  8027710 aaattgattatagagatatagaattgattttgaaatgttt 8027749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11038106 - 11038145
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  11038106 aaattgattctagaggtatataattgattttgacatgttt 11038145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 31246381 - 31246342
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  31246381 gtatccaaacataaatcaattcacattcaactcactttta 31246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 33733148 - 33733199
Alignment:
Q  216 taatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacacc 267  Q
    |||| ||||||||||||||||||| |||||||  || |||||||||||||||    
T  33733148 taataaattcactcaaaattaattattgtcactgcataatcaaacatacacc 33733199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 37158714 - 37158634
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgt-atccaaacataaatcaatttacatccaactcacttt 211  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||| ||| | |||||||||| ||||| |  ||||||||||    
T  37158714 ttttacactcaaatttattgttcaactcacctt--cacgtgaatgtaatcaagacataaatcattttaccttgaactcacttt 37158634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39648306 - 39648267
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  39648306 aaattgattctagagatgtataattgattttgacatgttt 39648267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 43492254 - 43492206
Alignment:
Q  149 gttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacat 199  Q
    |||||||| |||||||||  ||||||||||||||||||||||| |||||||    
T  43492254 gttcaacttacttttaca--tgaatgtatccaaacataaatcattttacat 43492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 32994327 - 32994197
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    |||||| | |||||||||| ||||  |||||||||| || |||| ||| ||||| ||  |||||||| || ||| | |||||||||  ||||||  ||||    
T  32994327 ttgattctacttgaagctatgatttctagcttttgagtctagaattgatttttatacacaaatttatagtgcaaatgacttttaca--tgaatgagtcca 32994230  T
Q  181 aacataaatcaa--tttacatccaactcacttt 211  Q
    ||||||||||||  ||||| | |||||||||||    
T  32994229 aacataaatcaaattttaccttcaactcacttt 32994197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 35064495 - 35064461
Alignment:
Q  130 ttttacacttaaatttattgttcaactcactttta 164  Q
    ||||||||||||||||||| |||||||||||||||    
T  35064495 ttttacacttaaatttattattcaactcactttta 35064461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 3097271 - 3097203
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||| | ||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  3097271 tatccaaacataaatcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaattct 3097203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 3467577 - 3467645
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||| ||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  3467577 tatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 3467645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 10552969 - 10552936
Alignment:
Q  180 aaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||||||||||||    
T  10552969 aaacataaatcaatttacattcaactcactttta 10552936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 18355792 - 18355747
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtcaccacagaa 254  Q
    ||||||| |||||||||||||||||| |||| || |||||||||||    
T  18355792 ttttacaaaatcaattcactcaaaatcaatttttatcaccacagaa 18355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 25698024 - 25697957
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||| |||||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  25698024 tatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattct 25697957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 30759363 - 30759311
Alignment:
Q  182 acataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    ||||||||||||| ||||||||||||||||||  || ||||||||| ||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 30759311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 38868498 - 38868583
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||| | |||||||||||||||  ||||||||| ||| | || ||| ||| ||||  |||||||| |||||||||| |||||||    
T  38868498 ttgattctacttgaagctaagatttgtagcttttggttctataattgattttcacacacaaatttatagttcaactcaattttaca 38868583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 38875252 - 38875211
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    ||||||||||||||||||||| |||||||  |||||||||||    
T  38875252 aatgtatccaaacataaatcactttacattgaactcactttt 38875211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 4941846 - 4941787
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    |||||||||||||||||||| || || ||||||||||||  || ||||||||| ||||||    
T  4941846 tatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaa 4941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 9695404 - 9695368
Alignment:
Q  229 caaaattaattcttgtcaccacagaatcaaacataca 265  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  9695404 caaaatcaattcttgtcaccacagaaccaaacataca 9695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 9695476 - 9695440
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttaca 166  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  9695476 ttttacactcaaatttattcttcaactcacttttaca 9695440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 25497734 - 25497773
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  25497734 tgtatccaaacataa-tcaattcacatccaactcactttta 25497773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 28425539 - 28425499
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| || || ||||||||||||    
T  28425539 tgtatccaaacataaatcaattcacctcaaactcactttta 28425499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 32809747 - 32809836
Alignment:
Q  121 agaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||| ||| |||||||||||||| |||||||||||  |||||||||  |||||  | ||||||| |||||| ||||| | ||||||| ||||    
T  32809747 agaattgaattttacacttaaatctattgttcaacaaacttttaca--tgaatagaaccaaacacaaatcactttaccttcaactcattttt 32809836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 37061344 - 37061296
Alignment:
Q  164 acacgtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||| ||||||||||||||||||||| |||||||||  || ||||||||    
T  37061344 acacatgaatgtatccaaacataaataaatttacatgtaaatcactttt 37061296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 40742362 - 40742322
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| | ||| ||||||||||||    
T  40742362 tgtatccaaacataaatcaattcagatcaaactcactttta 40742322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 41289125 - 41289085
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  41289125 tgtatccaaacataaatcaattcacaatcaactcactttta 41289085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 44141160 - 44141052
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaac 155  Q
    |||||||||||| || ||| |||| |||||| | ||||||| || ||||  ||| ||||||||| |||  ||| ||| |||| ||| ||||| |||||||    
T  44141160 agtagaattgattttgcctccaaaattgattctacttgaagttaggatttgtagtttttgattctagagttgattttcacacataattttatagttcaac 44141061  T
Q  156 tcactttta 164  Q
    || ||||||    
T  44141060 tcgctttta 44141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 33843771 - 33843896
Alignment:
Q  141 aatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaat 238  Q
    |||||||||||||||||||| |||||  ||||| ||||||||||||||||| |||||||||||||||||||||  || |||||||||| ||||||| |||    
T  33843771 aatttattgttcaactcactattaca--tgaatatatccaaacataaatcactttacatccaactcacttttagccagaatcaattcaatcaaaatcaat 33843868  T
Q  239 tcttgtcaccacagaatcaaacatacac 266  Q
    | |||||| |||| |  |||||||||||    
T  33843869 ttttgtcaacacaaagccaaacatacac 33843896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 8604707 - 8604593
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    |||||| | |||||||||||||||  ||||||| ||||| |||| ||| ||| ||||  |||||||| ||| ||  ||||||||||  ||||||||||||    
T  8604707 ttgattctacttgaagctaagatttgtagctttcgattctagaattgattttcacacacaaatttatagttgaatgcacttttaca--tgaatgtatcca 8604610  T
Q  181 aacataaatcaatttac 197  Q
    ||||||||||| |||||    
T  8604609 aacataaatcactttac 8604593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 239
Target Start/End: Complemental strand, 41751327 - 41751199
Alignment:
Q  111 ttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactt 210  Q
    ||||||||| |||| ||| ||||| |||||||||||||||| || ||| |||||||  ||||||||| ||||||| ||||| ||||  |  |||||||||    
T  41751327 ttttgattctagaattgatttttaaacttaaatttattgtttaattcagttttaca--tgaatgtattcaaacattaatcactttatcttgaactcactt 41751230  T
Q  211 tt--acataatcaattcactcaaaattaatt 239  Q
    ||  ||| ||| |||||||||||||| ||||    
T  41751229 ttaaacaaaataaattcactcaaaatcaatt 41751199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 55927802 - 55927725
Alignment:
Q  134 acacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| ||||||||||||||| |||||||||||  |||||||||||||||||||||||  |||  ||||||||| |||||    
T  55927802 acactcaaatttattgttcaagtcacttttaca--tgaatgtatccaaacataaatcacattaactccaactcaatttta 55927725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 39636804 - 39636874
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  39636804 tgtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattct 39636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 46830136 - 46830066
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||| ||| | ||||||    
T  46830136 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattct 46830066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 49136536 - 49136602
Alignment:
Q  168 gtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||  |||||||||||| ||||||    
T  49136536 gtgagtgtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaa 49136602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 4243414 - 4243472
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||||||||| |||| ||| ||||||||| ||||||||||||| |||||||||||||    
T  4243414 agcttttgattctagaattgatttttacactcaaatttattgttctactcacttttaca 4243472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 48550492 - 48550423
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattctt 242  Q
    |||||||||||||||||||| ||||||||||||||||||  || |||||||||  ||||||| |||||||    
T  48550492 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaattctt 48550423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 32818480 - 32818354
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaac 155  Q
    |||||||||||| || ||| || | |||||| |  |||||||||  |||  ||||||||||||| |||| ||| |||| |||  |||||||| |||||||    
T  32818480 agtagaattgattttgcctccagaattgattctatttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaaatttatagttcaac 32818381  T
Q  156 tcacttttacacgtgaatgtatccaaaca 184  Q
    | |||||||||  ||||||||||||||||    
T  32818380 taacttttaca--tgaatgtatccaaaca 32818354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 54487289 - 54487248
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  54487289 aatgtatccaaacataaatcaatttacattcaactcactttt 54487248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 6138687 - 6138647
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  6138687 tgtatccaaacataaatcaattcacatccaactcactttta 6138647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 22683913 - 22683994
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||| | |||||||||||||||||| ||||||||  | ||||| |||||||||||| || ||||| | |||||||||||||    
T  22683913 ttttacattgaaatttattgttcaactcgcttttaca--taaatgtgtccaaacataaaccattttactttcaactcactttta 22683994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 25319097 - 25319178
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| ||| ||||||||||||||||||||||||  |||| |||||||| |||||||||  | ||||||| ||||| |||||||    
T  25319097 ttttatactgaaatttattgttcaactcactttt--acgtaaatgtatcgaaacataaaaaactttacattcaacttactttta 25319178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 224
Target Start/End: Original strand, 25927325 - 25927447
Alignment:
Q  98 taagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttac 197  Q
    |||||||  |||||| |||||  |||| ||| |||||||  ||||||||| | |||| ||||||||||  ||||||||||| ||| ||||| || |||||    
T  25927325 taagatttgtagcttatgatttcagaattgatttttaca--taaatttatggctcaattcacttttac--gtgaatgtatcgaaatataaaacattttac 25927420  T
Q  198 atccaactcacttttacataatcaatt 224  Q
     | ||||||||||||| ||||||||||    
T  25927421 tttcaactcacttttagataatcaatt 25927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 48550239 - 48550306
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||||| || ||||| ||||||    
T  48550239 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattct 48550306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 16566324 - 16566394
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  16566324 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 16566394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 26651915 - 26651845
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||| ||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| ||||||||    
T  26651915 tgtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattct 26651845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 43772190 - 43772120
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||| ||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  43772190 tgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 43772120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 49519749 - 49519819
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||| |||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  49519749 tgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 49519819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 36150625 - 36150718
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||||||||||||||| ||||||| |||||||||||||  || ||||||||   ||||||| |||||| |||||| || || |||||| ||||    
T  36150625 tatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaattctcgtcaccgcacaaccaaacacacac 36150718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 41866171 - 41866213
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  41866171 aatgcatccaaacataaatcaattcacatccaactcactttta 41866213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 10185221 - 10185303
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcc-aaacataaatca 191  Q
    |||||||||||| | || |||  |||||||| |||||||||||| ||||||||||||||  | ||||||||| ||||||||||||    
T  10185221 agcttttgattctaaaattgatctttacactcaaatttattgtttaactcacttttaca--ttaatgtatccaaaacataaatca 10185303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 15619631 - 15619672
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  15619631 aatgtatccaaacatacatcaattcacatccaactcactttt 15619672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 42944963 - 42944895
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||| ||||||||||||||| |||| |||||||||||||  || ||||||||| |||||||| ||||||    
T  42944963 tatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 42944895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 4954113 - 4954050
Alignment:
Q  178 ccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    ||||||||||||||||| ||||| ||||||||||||  || ||||||||| |||||||| ||||    
T  4954113 ccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 17898150 - 17898085
Alignment:
Q  144 ttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcacttt 211  Q
    ||||||||||| ||||||||||   | ||| ||||||||||||||||| ||||||| |||||||||||    
T  17898150 ttattgttcaattcacttttacc--taaatatatccaaacataaatcactttacattcaactcacttt 17898085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 19592298 - 19592258
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  19592298 tgtatccaaacataaatcaattcacttccaactcactttta 19592258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 20911842 - 20911786
Alignment:
Q  209 ttttacataatcaattcactcaaaattaa-ttcttgtcaccacagaatcaaacatac 264  Q
    |||||||||||||||||||||||||| || || || |||||||| ||||||||||||    
T  20911842 ttttacataatcaattcactcaaaatcaattttttttcaccacaaaatcaaacatac 20911786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 22250285 - 22250369
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaatt 224  Q
    ||||||||||||| | |||||||||||  ||||||||||||||  ||||||| || |||| |||||| ||||||  |||||||||||    
T  22250285 aaatttattgttcgattcacttttaca--tgaatgtatccaaatgtaaatcacttcacattcaactcgcttttagtcataatcaatt 22250369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 32100341 - 32100377
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttaca 166  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32100341 ttttacactcaaatttattgttcaactcacttttaca 32100377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 46926067 - 46926107
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  46926067 tgtatccaaacataaatcaattcacatctaactcactttta 46926107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 47144263 - 47144324
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaat 193  Q
    |||||| || ||||||||||| ||||| ||||||| |  |||||||||||||||||||||||||    
T  47144263 ttttacgctaaaatttattgtccaactaacttttaga--tgaatgtatccaaacataaatcaat 47144324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 14076033 - 14076072
Alignment:
Q  172 atgtatccaaacataaatcaatttacatccaactcacttt 211  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  14076033 atgtttccaaacataaatcaatttacatcaaactcacttt 14076072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 14564217 - 14564143
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||| ||||||||||||||||||||| | ||||||||||| ||||  || ||||||||| |||||| | ||||||    
T  14564217 tgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattct 14564143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19067342 - 19067381
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  19067342 aaattgattccagagatataaaattgattttgacatgttt 19067381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 22980773 - 22980679
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaaca 261  Q
    |||| |||||||||||||||||| ||||||| ||||| |||||||  || |||||||||   |||||| |||| || |||||||| || ||||||    
T  22980773 tgaaggtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatttttttcaccacacaaccaaaca 22980679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 25312734 - 25312804
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||| ||||||||| ||||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  25312734 tgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattct 25312804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 29149374 - 29149335
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  29149374 tgtatccaaacataaatcaattcacattcaactcactttt 29149335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 35065092 - 35065176
Alignment:
Q  110 cttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaattta 196  Q
    |||||||||| |||| ||| ||||||||  ||||||||   || |||||||||||||  |||||||||||||||| |||||| ||||    
T  35065092 cttttgattctagaattgatttttacacacaaatttatatctccactcacttttaca--tgaatgtatccaaacacaaatcacttta 35065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 36639848 - 36639908
Alignment:
Q  134 acacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaattta 196  Q
    ||||||||||||||||||||||  || | ||||  ||||||||||||||||||||||| ||||    
T  36639848 acacttaaatttattgttcaacatacctgtaca--tgaatgtatccaaacataaatcacttta 36639908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 51922959 - 51923029
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| | || |||||||||||||  || ||||||||| |||||| | ||||||    
T  51922959 tgtatccaaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattct 51923029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 54150545 - 54150615
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||| ||||||||| ||||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  54150545 tgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattct 54150615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 13167544 - 13167605
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    |||||||||| ||||||||||| |||| |||||||||||||  || ||||||||| ||||||    
T  13167544 tgtatccaaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 13167605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 33560642 - 33560527
Alignment:
Q  94 aagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaat 193  Q
    |||||| ||||  |||||||||| || | || ||| ||||| ||| | ||| |||||||||||||||| ||   ||  ||||||| ||||||||| ||||    
T  33560642 aagctaggatttgtagcttttgagtctaaaagtgatttttaaactgacattcattgttcaactcacttatat--gtatatgtatctaaacataaaccaat 33560545  T
Q  194 ttacatccaactcacttt 211  Q
    |||||| |||||||||||    
T  33560544 ttacattcaactcacttt 33560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 55085163 - 55085125
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtt 39  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  55085163 aaattgattctagaggtatagaattgattttaacatgtt 55085125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 56241904 - 56241862
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||| | ||| ||||||||||||    
T  56241904 aatgtatccaaacataaatcaattcatatcaaactcactttta 56241862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 2175211 - 2175174
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  2175211 atccaaacataaatcaattcacatcaaactcactttta 2175174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 8754172 - 8754216
Alignment:
Q  168 gtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||    
T  8754172 gtgattgtatccaaacataaatcaa-ttacattcaactcactttta 8754216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 14054872 - 14054909
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  14054872 tatccaaacataaatcaattcacatcaaactcactttt 14054909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 16492945 - 16492986
Alignment:
Q  172 atgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  16492945 atgtatccaaacataaataaattcacattcaactcactttta 16492986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 45694716 - 45694757
Alignment:
Q  201 caactcacttttacataatcaattcactcaaaattaattctt 242  Q
    |||||||| |||||| |||||||||||||||||| |||||||    
T  45694716 caactcacgtttacagaatcaattcactcaaaatcaattctt 45694757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 17897843 - 17897799
Alignment:
Q  217 aatcaattcactcaaaattaattcttgtcaccacagaatcaaaca 261  Q
    |||||||||||||||||| |||| |||||||| ||||| ||||||    
T  17897843 aatcaattcactcaaaatcaatttttgtcaccgcagaaccaaaca 17897799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 19599559 - 19599493
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||| |||||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  19599559 atccaaacataaatcaa-ttacattcaactcacttttattcaaaatcaattctctcaaactcaattct 19599493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 22699757 - 22699801
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||| ||||||| ||||| |||||||    
T  22699757 tgaaggtatccaaacataaatcactttacattcaacttactttta 22699801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 22994360 - 22994316
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||| ||||||| ||||| |||||||    
T  22994360 tgaaggtatccaaacataaatcactttacattcaacttactttta 22994316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49138996 - 49138952
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttg 45  Q
    ||||||||||||||| | ||||||||||| |||||||||| ||||    
T  49138996 aaattgattctagaggtgtagaattgattctgacatgtttggttg 49138952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 50061738 - 50061630
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaac 155  Q
    |||||||||||| || ||| |||| |||||| | ||||||| || ||||  ||| ||||||||| |||  ||| ||| |||| ||| ||||| |||||||    
T  50061738 agtagaattgattttgcctccaaaattgattctacttgaagttaggatttgtagtttttgattctagagttgattttcacacataattttatggttcaac 50061639  T
Q  156 tcactttta 164  Q
    || ||||||    
T  50061638 tcgctttta 50061630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 50358175 - 50358139
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatg 37  Q
    ||||||||||||||| | |||||||||||||||||||    
T  50358175 aaattgattctagaggtgtagaattgattttgacatg 50358139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 53914918 - 53914957
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  53914918 tgtatccaaacataaatcaa-ttacattcaactcactttta 53914957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 55638822 - 55638782
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||| ||||||||||||||||||||  ||||||||||||    
T  55638822 tgtatctaaacataaatcaatttacatttaactcactttta 55638782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 108 - 266
Target Start/End: Original strand, 27571889 - 27572047
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    |||||||||||| |||| ||| ||| ||||| || |||||| |||||||||| ||||||  | ||||||||||| ||||||||| ||||| |  ||||||    
T  27571889 agcttttgattctagaattgattttaacactcaagtttattattcaactcacatttaca--taaatgtatccaaccataaatcattttacctttaactca 27571986  T
Q  208 ctttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||||  |||||||||||||| |||||| |||| |||||| ||||||| || ||||||||    
T  27571987 cttttagccataatcaattcacccaaaatcaatttttgtcaacacagaaccatacatacac 27572047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 40491558 - 40491708
Alignment:
Q  61 aattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcact 160  Q
    ||||||| || |||||| | |||| | | ||||||| |||| ||  ||||||||||||| |||| ||||||||||||  |||||||  ||| ||||||||    
T  40491558 aattgattttgccttcagaattgactctacttgaagttaagttttgtagcttttgattctagaattgacttttacacacaaatttaaagtttaactcact 40491657  T
Q  161 tttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||  |||||||||||||| |||||||| ||||| | |||||||||||||    
T  40491658 tttaca--tgaatgtatccaaaaataaatcactttaccttcaactcactttta 40491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 107 - 263
Target Start/End: Complemental strand, 38123725 - 38123569
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    |||||| | |||| |||| ||| ||||||||| |||||||||| ||||||||||||||||  ||||||| ||| |||| |||| | ||||| | ||||||    
T  38123725 tagcttctaattctagaattgatttttacactcaaatttattggtcaactcacttttaca--tgaatgtgtccgaacacaaattactttaccttcaactc 38123628  T
Q  207 actttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacata 263  Q
    | |||||  ||||||||||| |||||||||| ||  || ||||| ||||| ||||||||    
T  38123627 aattttagtcataatcaatttactcaaaatttatatttctcaccgcagaaccaaacata 38123569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 40561791 - 40561690
Alignment:
Q  133 tacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc-acttttac-ataatcaattcactca 230  Q
    |||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||| ||||| | |||||| | |||||| | ||||||||||||||    
T  40561791 tacactcaaatatattgttcaactcacttttaca--tgaatgtatccaaacataaatcactttactttcaactcaatttttactagaatcaattcactca 40561694  T
Q  231 aaat 234  Q
    ||||    
T  40561693 aaat 40561690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 107 - 247
Target Start/End: Original strand, 45557391 - 45557531
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    |||||||| |||| || | ||| ||||||||  |||||| | | ||||||||||||||||  |||||||||||||||| |||||| ||||| | ||||||    
T  45557391 tagcttttaattctaggattgatttttacacacaaatttgtagctcaactcacttttaca--tgaatgtatccaaacacaaatcactttaccttcaactc 45557488  T
Q  207 actttta--cataatcaattcactcaaaattaattcttgtcac 247  Q
    |||||||  || |||||||||| ||||||| ||||| ||||||    
T  45557489 acttttagtcagaatcaattcattcaaaatcaattcctgtcac 45557531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 32186998 - 32187065
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||||| || ||||||||||||    
T  32186998 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaattaattct 32187065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 3622514 - 3622444
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  3622514 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 3622444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 3750741 - 3750802
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    |||||||||||||||||||||| ||||||||||||||||||  || ||||||||| ||||||    
T  3750741 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 3750802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 22310495 - 22310437
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatc 190  Q
    ||||||||||||||||||| ||||| ||||||||  ||| |||||||||||||||||||||    
T  22310495 ttttacacttaaatttatttttcaattcactttt--acgagaatgtatccaaacataaatc 22310437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 37562625 - 37562665
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  37562625 tgtatccaaacataaatcaattcacatccaactcactttta 37562665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 41715715 - 41715782
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||||| || ||||| ||||||    
T  41715715 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattct 41715782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 48459765 - 48459835
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  48459765 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 48459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 598105 - 597946
Alignment:
Q  2 aattgattctagagatatagaattgattttgacatgtttcgttgcctggccttaagtagaattgatattcccttcaaagttgattatgcttgaagctaag 101  Q
    |||||||||||||| | | |||||||||||||||| ||| ||| |||   || |||| ||||| |||||  || || | |||||| | |||||||||||     
T  598105 aattgattctagaggtgtggaattgattttgacatttttagtt-cct---ctaaagtggaatttatattggctgcagaattgattctacttgaagctaaa 598010  T
Q  102 attcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||  ||||||| ||||| | || ||| | || |||| |||||||||||||||||||||||||||    
T  598009 attg-tagctttcgattctataattgattcttgcactaaaatttattgttcaactcacttttaca 597946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 29829368 - 29829287
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcacc 248  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||  || |||||||||| ||| ||| |||| || |||||    
T  29829368 tgaatgtatccaaacataaatcactttacattcaactcatttttagccagaatcaattcattcagaatcaatttttatcacc 29829287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 30182404 - 30182311
Alignment:
Q  57 gtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgtt 151  Q
    ||||||||||| |||||| |||| |||||| | ||||||||||| | |  ||||||||||||| |||| | | ||||||||| ||||||||||||    
T  30182404 gtagaattgat-ttccctccaaaattgattctacttgaagctaaaaattgtagcttttgattctagaattaatttttacactcaaatttattgtt 30182311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 33853510 - 33853404
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaa 237  Q
    ||||||||||| || ||  ||||||||  ||||||||||||||||||||||| ||||  | ||||||||| |||  || |||||||||||| ||||| ||    
T  33853510 aaatttattgtccagcttgcttttaca--tgaatgtatccaaacataaatcactttagcttcaactcactcttagccagaatcaattcactaaaaatcaa 33853413  T
Q  238 ttcttgtca 246  Q
    || ||||||    
T  33853412 tttttgtca 33853404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 38230121 - 38230163
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  38230121 aatgtatccaaacataaatcaattcacattcaactcactttta 38230163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 40491728 - 40491774
Alignment:
Q  217 aatcaattcactcaaaattaattcttgtcaccacagaatcaaacata 263  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  40491728 aatcaattcactcaaaatcaattcttgtcaccgcagaaccaaacata 40491774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 24770963 - 24770895
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||| ||| ||||||||||||||||||||||||||||||  || ||||||||  |||||| ||||||||    
T  24770963 tatctaaatataaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaacttaattct 24770895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 42481833 - 42481776
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||||||||||||| ||||| ||||||| ||||| ||| | |||||||||||    
T  42481833 ttttacataatcaattcacttaaaatcaattcttttcaccgcaggagcaaacatacac 42481776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 3342845 - 3342885
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  3342845 tgtatccaaacataaatcaattcatatccaactcactttta 3342885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 15311274 - 15311230
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||    
T  15311274 tgaatgtatccaaacataaatcactatacattcaactcactttta 15311230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 47217592 - 47217525
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||| ||||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  47217592 atccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattct 47217525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 10372012 - 10371942
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||| ||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  10372012 tgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 10371942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38123809 - 38123770
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  38123809 aaattgattctagagatgtagaattgattttaacatgttt 38123770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 42752244 - 42752205
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  42752244 gtatccaaacataaatcaattcacattcaactcactttta 42752205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45004909 - 45004948
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  45004909 aaattgattctagaggtgtagaattgattttgacatgttt 45004948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 48968267 - 48968136
Alignment:
Q  138 ttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaatt 235  Q
    ||||||||||||||||| ||| |||||||    ||| ||| |||||| | ||||||  || |  ||||||||||||  ||||||||||| | |||||||     
T  48968267 ttaaatttattgttcaaatcagttttacaaa--aatatattcaaacaaacatcaatcaacttttaactcacttttatacataatcaatttattcaaaatc 48968170  T
Q  236 aattcttgtcaccacagaatcaaacatacaccaa 269  Q
    | ||||||||| |||| || ||||||||||||||    
T  48968169 agttcttgtcatcacaaaaccaaacatacaccaa 48968136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 1766481 - 1766570
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaaca 261  Q
    ||||||||| |||||||||||||  | |||||||||||||  || |||||||| | ||||||| |||||| ||||| ||| || ||||||    
T  1766481 gtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatttaatcaaaatcaattctcgtcacaacataaccaaaca 1766570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 17111904 - 17112006
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaa 237  Q
    ||||||||  ||| ||||| |||||||  |||||| ||||||||| |||||| ||||| | ||| ||| |||||  || |||||||||||||||||| ||    
T  17111904 aaatttataattctactcatttttaca--tgaatgcatccaaacacaaatcactttacctacaattcaattttagtcaaaatcaattcactcaaaatcaa 17112001  T
Q  238 ttctt 242  Q
    |||||    
T  17112002 ttctt 17112006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 32938724 - 32938639
Alignment:
Q  128 acttttacacttaaatttattgttcaactcacttttac-acgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||| ||||||||||||||||||||||| |||||| || | ||  |||| ||||||||||| |||||||| || || |||||||    
T  32938724 acttttagacttaaatttattgttcaactcagttttactacataaacatatctaaacataaatc-atttacattcagcttactttta 32938639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 41788245 - 41788287
Alignment:
Q  4 ttgattctagagatatagaattgattttgacatgtttcgttgc 46  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||    
T  41788245 ttgattctagaaatatagaattgattttggcatgtttggttgc 41788287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 44967453 - 44967392
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    ||||| |||||||||||||||| |||| |||||||||||||  || ||||||||| ||||||    
T  44967453 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 44967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 12306748 - 12306853
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaattta--ttgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaact 205  Q
    |||||||||||  |||| ||| ||||||||| ||||| |   | |||||||||||||||||  ||||| || |||||||||||||| ||||  | |||||    
T  12306748 agcttttgattttagaattgatttttacactcaaattcactatattcaactcacttttaca--tgaatctagccaaacataaatcactttatcttcaact 12306845  T
Q  206 cactttta 213  Q
    ||||||||    
T  12306846 cactttta 12306853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 18350165 - 18350120
Alignment:
Q  167 cgtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||  |||||||||||| ||||||| ||||||||||||    
T  18350165 cgtgaatgtatgtaaacataaatcattttacattcaactcactttt 18350120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 32205980 - 32206020
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  32205980 tgtatccaaacataaatcaattcacatcaaacccactttta 32206020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 39391191 - 39391151
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| || || ||||||||||||    
T  39391191 tgtatccaaacataaatcaattcacctcaaactcactttta 39391151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 44570776 - 44570695
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||| | |||||||||  |||||||||||||| |  ||||| ||  ||||||||||||| ||||||| ||||||| |||||    
T  44570776 ttttacattcaaatttatttatcaactcacttttata--tgaatataatcaaacataaatcactttacattcaactcaatttta 44570695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 266
Target Start/End: Original strand, 51285579 - 51285755
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    ||||||||||| | ||| |||||||||||| |||| ||| |||| |||| |||||| ||||| ||| | ||||||||  ||||||||||||| ||| |||    
T  51285579 cttgaagctaaaaatcacagcttttgattctagaattgatttttgcactcaaatttgttgtttaacccgcttttaca--tgaatgtatccaagcatgaat 51285676  T
Q  190 caatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
     | ||||||| |||||||||||||  |||||| |||||||||||||| |||| || ||||| || || |||||| ||||    
T  51285677 tactttacattcaactcacttttagccataataaattcactcaaaatcaatttttctcaccgcaaaaccaaacacacac 51285755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 108 - 266
Target Start/End: Complemental strand, 46853592 - 46853435
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    |||||||||||| |||| ||| ||| ||||| |||||||||||||||||||||||||||  | ||| |||||  |||||||||| ||||| | ||||| |    
T  46853592 agcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttaca--taaatatatcctgacataaatcactttaccttcaactta 46853495  T
Q  208 ctttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||| ||  || ||||||||||||||| || |||| |||||| |  ||||||||||||||||    
T  46853494 cttgtagccaaaatcaattcactcaagatcaatt-ttgtcaacttagaatcaaacatacac 46853435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 35264469 - 35264367
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    |||||||||||| |||| ||| ||| ||||||||||||||||||||| ||| |||||||  |||||||| |||||||||| ||| ||||| | |||||||    
T  35264469 agcttttgattctagaattgattttaacacttaaatttattgttcaagtcatttttaca--tgaatgtacccaaacataactcactttactttcaactca 35264372  T
Q  208 ctttt 212  Q
    |||||    
T  35264371 ctttt 35264367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 37335093 - 37334989
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    ||||||||||||| |||| ||| |||||||||| |||| ||||||||||||| ||||| |  ||||||||| || |||||||||| ||||| | ||||||    
T  37335093 tagcttttgattctagaattgatttttacacttgaattcattgttcaactcatttttata--tgaatgtattcagacataaatcactttaccttcaactc 37334996  T
Q  207 actttta 213  Q
    | |||||    
T  37334995 aatttta 37334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 244
Target Start/End: Original strand, 36302157 - 36302348
Alignment:
Q  55 aagtagaattgatattcccttcaaagttgattatgcttgaagcta-agattcatagcttttgattcgagaactgacttttacacttaaatttattgttca 153  Q
    ||||||||||||| || |||||| |||||||| |  ||||||||| |||||   || ||||||||  |||| ||| |||  |||||||||||||||||||    
T  36302157 aagtagaattgattttgccttcagagttgattctatttgaagctagagattgg-agattttgattttagaattgattttagcacttaaatttattgttca 36302255  T
Q  154 actcacttttacacgtgaatgtatccaaacataaatcaatttacatc--caactcactttta--cataatcaattcactcaaaattaattcttgt 244  Q
    |||||||||||||  |||||| ||||| |||| ||||| |||  |||  ||||||| |||||  |  |||||||||||||||||| |||| ||||    
T  36302256 actcacttttaca--tgaatgaatccacacattaatcattttttatcttcaactcaattttaaccggaatcaattcactcaaaatcaatttttgt 36302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 3348277 - 3348347
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||||||||||||||||||| ||  || |||||||||||| ||| | ||||||    
T  3348277 tgtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattct 3348347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 3776548 - 3776652
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    |||||| |||||| |||| | | ||||||||| |||||| ||| | ||||||||||||||  | ||||||||||| ||||||||| ||||||| ||||||    
T  3776548 tagcttctgattctagaattaatttttacactcaaatttgttgctgaactcacttttaca--tcaatgtatccaagcataaatcactttacattcaactc 3776645  T
Q  207 actttta 213  Q
    | |||||    
T  3776646 aatttta 3776652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 7012670 - 7012764
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaaca 261  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||  || |||||||||   ||||||||||| ||  ||||||| |||||||||    
T  7012670 tgaaggtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaaaattaattttttccaccacacaatcaaaca 7012764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 51667195 - 51667277
Alignment:
Q  141 aatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaat 223  Q
    ||||||||||||||| ||||||||||  ||||| || |||||||||||||| |||||||||| |||| |||||  ||||||||||    
T  51667195 aatttattgttcaacgcacttttaca--tgaatctacccaaacataaatcactttacatccagctcaattttattcataatcaat 51667277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 53179882 - 53179922
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  53179882 tgtatccaaacataaatcaatttacatcaaactcactttta 53179922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 21225024 - 21225094
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||| ||||||||||||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  21225024 tgtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattct 21225094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 30958063 - 30958167
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaa-tttacatccaactc 206  Q
    |||||||| ||| | || |||||||||  ||| || ||||||||||| |||||||||||  ||||| ||||||||||||||| || ||||||| ||||||    
T  30958063 agcttttgtttctacaagtgacttttaacctttaaattattgttcaattcacttttaca--tgaatatatccaaacataaataaactttacattcaactc 30958160  T
Q  207 actttta 213  Q
    || ||||    
T  30958161 acattta 30958167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 30973875 - 30973979
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaa-tttacatccaactc 206  Q
    |||||||| ||| | || |||||||||  ||| || ||||||||||| |||||||||||  ||||| ||||||||||||||| || ||||||| ||||||    
T  30973875 agcttttgtttctacaagtgacttttaacctttaaattattgttcaattcacttttaca--tgaatatatccaaacataaataaactttacattcaactc 30973972  T
Q  207 actttta 213  Q
    || ||||    
T  30973973 acattta 30973979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 31084241 - 31084311
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || |||||||||  ||||||| ||||||    
T  31084241 tgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaattct 31084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 38172374 - 38172304
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||||| |||||||||||  || ||||||||| |||||| | ||||||    
T  38172374 tgtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattct 38172304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 50664792 - 50664862
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  50664792 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 50664862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 19877453 - 19877491
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  19877453 tatctaaacataaatcaatttacatccaactcactttta 19877491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 23496352 - 23496421
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  23496352 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 23496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 33792073 - 33791982
Alignment:
Q  99 aagattcatagcttttgattcgagaactgacttttacacttaaatttattg-ttcaactcacttttacacgtgaatgtatccaaacataaatca 191  Q
    ||||||||||| ||||||||  | || ||| |||||||| ||||||||||| || ||||||||||||||  ||||| |||||||||| ||||||    
T  33792073 aagattcatagtttttgattttataattgatttttacacataaatttattgtttaaactcacttttaca--tgaatctatccaaacacaaatca 33791982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 38340841 - 38340879
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  38340841 tatccaaacataaatcaattcacatccaactcactttta 38340879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 40415361 - 40415323
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40415361 tatccaaacataaattaatttacatccaactcactttta 40415323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 38332589 - 38332527
Alignment:
Q  131 tttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaattt 195  Q
    |||||||| |||||||||||||||||||  ||||  | ||||||||| |||||||||||||||||    
T  38332589 tttacactcaaatttattgttcaactca--tttatccatgaatgtatacaaacataaatcaattt 38332527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 41596208 - 41596110
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    ||||||||||||  |||| ||| ||||||||  || ||||| |||  |||||||||| ||  |||||||||||||||| |||||| ||||||| ||||||    
T  41596208 tagcttttgattaaagaattgatttttacacacaagtttatagtttgactcacttttcca--tgaatgtatccaaacagaaatcactttacattcaactc 41596111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 49526740 - 49526668
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||  || |||||||||  ||||||| ||||    
T  49526740 tgaatgtatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaatcaatt 49526668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 190875 - 190924
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaa 181  Q
    |||| |||| |||||||||||||||||||||||  |||||||||||||||||    
T  190875 ttttgcactcaaatttattgttcaactcacttt--cacgtgaatgtatccaa 190924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 4984615 - 4984655
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  4984615 tgtatccaaacataaatcaattcacatctaactcactttta 4984655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 16246157 - 16246121
Alignment:
Q  177 tccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16246157 tccaaacataaatcaatttacatctaactcactttta 16246121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 27266830 - 27266765
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttac 197  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||  |||| |||||||||||| |||||    
T  27266830 ttttacactcaaatttattgttcaactaacttttaca--tgaaaatatctaaacataaatcactttac 27266765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 44224791 - 44224866
Alignment:
Q  168 gtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||| |||||||||||||||||||||| | ||| ||||||||||||  |||||||||||  |||||| | ||||||    
T  44224791 gtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaattct 44224866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 52364060 - 52364136
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||||||| |||| |||||||||||||| | || ||| ||| | || ||||||||  ||||||||||||||||||    
T  52364060 cttgaagctatgatttatagcttttgattctataattgattttcaaacataaatttacagttcaactcacttttaca 52364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 2076485 - 2076573
Alignment:
Q  112 tttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatcca 202  Q
    |||||||| |||| ||| ||||||||||||||| | | |||||||| || |||||  | |||| ||| |||||||||||||| ||||||||    
T  2076485 tttgattctagaattgatttttacacttaaattaaatcttcaactcgctcttaca--taaatgcatctaaacataaatcaatctacatcca 2076573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3845273 - 3845234
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  3845273 aaattgattctagaggtgtagaattgattttgacatgttt 3845234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 15511442 - 15511403
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  15511442 gtatccaaacataaatcaattcacacccaactcactttta 15511403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 26519698 - 26519737
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  26519698 tgtatccaaacataaatcaattcacattcaactcactttt 26519737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 31708298 - 31708194
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    ||||||||||||| |||| ||| | | ||||  ||||||||  |||||||||||||||||  |||||||||||||||| ||| || ||||    ||||||    
T  31708298 tagcttttgattctagaattgattctaacacacaaatttataattcaactcacttttaca--tgaatgtatccaaacacaaaccactttatcagcaactc 31708201  T
Q  207 actttta 213  Q
    |||||||    
T  31708200 actttta 31708194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 35253526 - 35253438
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttac 197  Q
    |||||| || ||| |||| ||| ||||||||| ||||||||  |||||||||||||||||  ||| ||| |||||| |||||||| |||||    
T  35253526 tagcttctggttctagaattgatttttacactcaaatttatcattcaactcacttttaca--tgattgtttccaaatataaatcactttac 35253438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 40147908 - 40147832
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacata 186  Q
    |||||||||||| |||| ||| ||  |||||| |||||||  |||||||||||||||||  | ||||||||||||||||    
T  40147908 agcttttgattctagaattgatttcaacacttgaatttatcattcaactcacttttaca--ttaatgtatccaaacata 40147832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 42484513 - 42484420
Alignment:
Q  152 caactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtca 246  Q
    |||||||||||||||   | ||| ||| ||||| |||||| ||||| | |||| ||||||||  || |||||||||||||| |||||||||||||||    
T  42484513 caactcacttttaca---gtatgcatctaaacacaaatcactttacctgcaacccacttttaaccagaatcaattcactcataattaattcttgtca 42484420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 44771870 - 44771913
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtcaccacag 252  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||    
T  44771870 ttttacataatcaattcattcaaaatcaattcttgtcactacag 44771913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 48189508 - 48189439
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| ||||||||||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  48189508 tgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 48189439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 34561140 - 34561182
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  34561140 aatgtatccaaacataaatcaattcgcattcaactcactttta 34561182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 42644298 - 42644336
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  42644298 tatccaaacataaatcactttacattcaactcactttta 42644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 48089687 - 48089645
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||    
T  48089687 aatgtatccaatcataaatcattttacattcaactcactttta 48089645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 52966871 - 52966806
Alignment:
Q  178 ccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||| ||||| || |||||||||  || ||||||||| |||||||| ||||||    
T  52966871 ccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattct 52966806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 10853332 - 10853264
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||  ||||||||||||  || ||||||||| |||||| | ||||||    
T  10853332 tatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattct 10853264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 35058388 - 35058445
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaat-ttattgttcaactcactttta 164  Q
    |||||||||||| |||| ||| ||| ||||| |||| |||||||||||||||||||||    
T  35058388 agcttttgattctagaattgattttaacactcaaatattattgttcaactcactttta 35058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 41591378 - 41591308
Alignment:
Q  141 aatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| |||| ||| | |||||||||  ||||||||||||||||||||||| |||| || ||||||| |||||    
T  41591378 aattttttgtccaattaacttttaca--tgaatgtatccaaacataaatcactttaaattcaactcattttta 41591308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 44939484 - 44939413
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||| |||||| | || |||||||||||||  || |||||||||||||||| | ||||||    
T  44939484 aatgtatccaaacataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaattct 44939413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52925772 - 52925727
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttgc 46  Q
    ||||||||||||||| | || ||||||||||||||||||| |||||    
T  52925772 aaattgattctagaggtgtataattgattttgacatgtttggttgc 52925727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21007802 - 21007758
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttg 45  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||    
T  21007802 aaattgattttaaagatatataattgattttgacatgtttagttg 21007758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 23207135 - 23207095
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| |||||| |||||    
T  23207135 tgtatccaaacataaatcaattcacatcaaactcattttta 23207095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 24916626 - 24916686
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacaccaa 269  Q
    ||||||| |||||| ||  |||||||||||| |||||||| ||||| |||||| |||||||    
T  24916626 ttttacaaaatcaactcgttcaaaattaatttttgtcaccgcagaaccaaacacacaccaa 24916686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 37703148 - 37703184
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttaca 166  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  37703148 ttttacactcaaatttattgttcaattcacttttaca 37703184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 38626738 - 38626786
Alignment:
Q  165 cacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||| | ||||||||||||||| || |||| |||||||||||||    
T  38626738 cacgtgaatatgtccaaacataaatcatttcacattcaactcactttta 38626786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 43661892 - 43661945
Alignment:
Q  134 acacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    |||| ||||| ||||||||||||||||||||||  |||||||||  ||||||||||    
T  43661892 acacataaatgtattgttcaactcacttttaca--tgaatgtataaaaacataaat 43661945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 43965683 - 43965748
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttac 197  Q
    ||||||||| ||| |||||||||||||||  ||| || |||||||||| |||| |||||||| |||||    
T  43965683 ttttacactcaaaattattgttcaactca--ttttcaggtgaatgtattcaaagataaatcattttac 43965748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 52931639 - 52931599
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  52931639 tgtatccaaacataaatcaatttacactaaactcactttta 52931599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34620810 - 34621039
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttgcctggccttaagtagaattgatattcccttcaaagttgattatgcttgaagctaa 100  Q
    |||||||||||| || | |||||||||||||||||||||| ||| |||    | || ||||||| || || ||| |  | |||||| | | ||||||||     
T  34620810 aaattgattctaaaggtgtagaattgattttgacatgtttggtt-ccta---taaactagaattaattttgcctccggaattgattctacatgaagctag 34620905  T
Q  101 gattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatc 200  Q
     | ||||||||| |||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||  | ||||||||||||||||||||| ||||| |     
T  34620906 aaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcacttttaca--taaatgtatccaaacataaatcactttacctt 34621003  T
Q  201 caactcactttta--cataatcaattcactcaaaat 234  Q
    ||||||| || ||  || |||| |||||||||||||    
T  34621004 caactcaattctagccagaatccattcactcaaaat 34621039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34748247 - 34748476
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttgcctggccttaagtagaattgatattcccttcaaagttgattatgcttgaagctaa 100  Q
    |||||||||||| || | |||||||||||||||||||||| ||| |||    | || ||||||| || || ||| |  | |||||| | | ||||||||     
T  34748247 aaattgattctaaaggtgtagaattgattttgacatgtttggtt-ccta---taaactagaattaattttgcctccggaattgattctacatgaagctag 34748342  T
Q  101 gattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatc 200  Q
     | ||||||||| |||||| |||| ||| ||||||||| ||||||||| |||||||||||||||||  | ||||||||||||||||||||| ||||| |     
T  34748343 aaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcacttttaca--taaatgtatccaaacataaatcactttacctt 34748440  T
Q  201 caactcactttta--cataatcaattcactcaaaat 234  Q
    ||||||| || ||  || |||| |||||||||||||    
T  34748441 caactcaattctagccagaatccattcactcaaaat 34748476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 259
Target Start/End: Complemental strand, 434345 - 434143
Alignment:
Q  58 tagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactc 157  Q
    |||||||||| || | |||| | ||||||||  |||||| ||| ||| |||||||||||||  |||| ||| ||||| || ||||||||   ||||||||    
T  434345 tagaattgatttttctttcataattgattatatttgaagttaaaattaatagcttttgattttagaattgatttttatacataaatttaaatttcaactc 434246  T
Q  158 acttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattc-actcaaaattaattcttgtcaccacagaa 254  Q
    ||||||||||  |||| |||||||||| |||||| ||||| | |||||||||||||  ||||||| |||| ||||||||| ||||||  ||||| || ||    
T  434245 acttttacac--gaatatatccaaacacaaatcattttacctgcaactcacttttagccataatccattcaactcaaaatcaattctaatcaccgcaaaa 434148  T
Q  255 tcaaa 259  Q
    |||||    
T  434147 tcaaa 434143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 882735 - 882837
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcac 227  Q
    ||||||| | |||||||||||| ||||||||||| ||  ||||||||||||||||||||||| ||||| | ||||||| |||||   | |||||||||||    
T  882735 ttttacattcaaatttattgtttaactcacttttgca--tgaatgtatccaaacataaatcattttaccttcaactcaattttaactagaatcaattcac 882832  T
Q  228 tcaaa 232  Q
    |||||    
T  882833 tcaaa 882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 1485204 - 1485123
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatca 191  Q
    |||||||||||| |||| ||| ||| ||||| |||||||||||||||||||||||||||  | | ||||||||||| |||||||    
T  1485204 agcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttaca--taagtgtatccaaacgtaaatca 1485123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 4910908 - 4911016
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    |||||| | |||||||||| ||||  ||||||||||||| |||| ||| ||| |||   |||||||| |||| |||||||||||||  | ||||||||||    
T  4910908 ttgattctacttgaagctatgatttgtagcttttgattctagaattgattttcacatacaaatttatagttcgactcacttttaca--taaatgtatcca 4911005  T
Q  181 aacataaatca 191  Q
    |||||||||||    
T  4911006 aacataaatca 4911016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 31305905 - 31305826
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    |||||||||||| |||| ||| || |||||| |||||||||| ||||||||||||||||  | ||| |||||||||||||||    
T  31305905 agcttttgattctagaattgatttatacactcaaatttattgatcaactcacttttaca--ttaatatatccaaacataaat 31305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 6208129 - 6208060
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| |||||| |||| |||||||||||||  || |||||||||||||||||| ||||||    
T  6208129 tgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaattct 6208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 34027475 - 34027417
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||||||||| |||| ||| ||||||||| ||||||||| ||||||||||| |||||    
T  34027475 agcttttgattctagaattgatttttacactcaaatttattattcaactcactcttaca 34027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 2234490 - 2234644
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaattta-ttgttcaa 154  Q
    |||||||||||| || |||||||| ||||||   ||||||||||| |     |||||||||||| |||| ||| ||| ||||| ||||||| ||||||||    
T  2234490 agtagaattgattttgccttcaaaattgattcaacttgaagctaaaaactgaagcttttgattctagaattgattttaacactcaaatttatttgttcaa 2234589  T
Q  155 ctcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||| |||||  | ||||||||||| |  |||||| ||||| | || ||||||||||    
T  2234590 ctcactattaca--taaatgtatccaagc--aaatcattttaccttcatctcactttta 2234644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 7486479 - 7486560
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||  |||||||| ||||||| |||  ||||  ||||||||||||||||| ||||| |  ||||||||||||    
T  7486479 ttttacacttaaattgtttgttcaattcactttcaca--tgaacttatccaaacataaatcattttaccttaaactcactttta 7486560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 16548173 - 16548213
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  16548173 tgtatccaaacataaatcaattcacattcaactcactttta 16548213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 26492623 - 26492687
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcacttttacataatcaattcactcaaaattaatt 239  Q
    |||||||||||||| || ||||||| ||||||| ||| ||| |||||| ||| ||||||||||||    
T  26492623 tatccaaacataaaacactttacattcaactcaatttcacagaatcaagtcattcaaaattaatt 26492687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 29240451 - 29240407
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||    
T  29240451 tgaatgcatccaaacataaatgaatttacattcaactcactttta 29240407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 29409318 - 29409278
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  29409318 tgtatccaaacataaatcaattcacatcaaactcactttta 29409278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 30927043 - 30927099
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacac 137  Q
    |||||||| |||||||||||||||| ||||||||||||  |||| ||| ||||||||    
T  30927043 ttgattatacttgaagctaagattcgtagcttttgattatagaattgatttttacac 30927099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 6653822 - 6653924
Alignment:
Q  91 ttgaagctaagattcatagc--ttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaa 188  Q
    |||||| || ||||||||||  ||||||||| |||| ||| ||| |||   |||||||| ||| ||||||||||||||  ||| |||||||||||| |||    
T  6653822 ttgaaggtaggattcatagcacttttgattctagaattgagtttcacatgcaaatttatagtttaactcacttttacatatgattgtatccaaacacaaa 6653921  T
Q  189 tca 191  Q
    |||    
T  6653922 tca 6653924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 16442417 - 16442347
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||| ||   | ||||||||| |||||||| ||||||    
T  16442417 tgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattct 16442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 32888985 - 32888929
Alignment:
Q  138 ttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaattta 196  Q
    |||||||||||||||||||||||||||||  | ||| ||| ||||||||||||| ||||    
T  32888985 ttaaatttattgttcaactcacttttaca--taaatatattcaaacataaatcatttta 32888929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 33899072 - 33899002
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| | ||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  33899072 tgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaattct 33899002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33997122 - 33997161
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  33997122 aaattgattctagagatttagaatcgattttgacatgttt 33997161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 3809718 - 3809815
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||||||||||||||||||| | ||  |  ||||||||||||  |||||| |||| ||| |||| |||||||||| |||||| || || ||||||||    
T  3809718 aatgtatccaaacataaatcactgtatctttaactcacttttaatcataattaatttactgaaaaataattcttgttaccacataaccacacatacac 3809815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 28466981 - 28466884
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||||||||||| || | ||| | ||||||| |||||  || |||||||||||||||||| | || || || || ||||| |||||||||||    
T  28466981 aatgtatccaaacataaaccactataccttcaactcaattttagccagaatcaattcactcaaaatcattttttctcgccgcagaaccaaacatacac 28466884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 34736752 - 34736849
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||||||||||| || | ||| | ||||||| |||||  || |||||||||||||||||| | || || || || ||||| |||||||||||    
T  34736752 aatgtatccaaacataaaccactataccttcaactcaattttagccagaatcaattcactcaaaatcattttttctcgccgcagaaccaaacatacac 34736849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 34800807 - 34800742
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    |||||||||||||||||||| ||  | |||||||||||  ||||||||||||| ||||||| ||||    
T  34800807 atccaaacataaatcaattttcaggccactcacttttatgcataatcaattcattcaaaatcaatt 34800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 34063359 - 34063464
Alignment:
Q  128 acttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattc 225  Q
    ||||||||| | ||| |||||||| ||| ||||||||||  | ||| || |||||||||||||| ||||  | |||| || |||||  ||||||||||||    
T  34063359 acttttacaatcaaacttattgttaaacccacttttaca--taaatataaccaaacataaatcactttagcttcaacccaattttaatcataatcaattc 34063456  T
Q  226 actcaaaa 233  Q
    ||||||||    
T  34063457 actcaaaa 34063464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 957708 - 957595
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    |||||| | |||| |||||||||| |||| ||||||||| | ||  || ||||||||  ||| |||   || |||||| |||||||  ||||||||||||    
T  957708 ttgattttacttgtagctaagatttatagtttttgattccataatcgatttttacacacaaacttaaaatttaactcatttttaca--tgaatgtatcca 957611  T
Q  181 aacataaatcaattta 196  Q
    ||||||||||| ||||    
T  957610 aacataaatcatttta 957595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 1499973 - 1500030
Alignment:
Q  154 actcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||  | ||||||| ||||||||||||||||||||  |||||| ||||||    
T  1499973 actcacttttaca--taaatgtattcaaacataaatcaatttacactcaactcgctttta 1500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 3798986 - 3799085
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||  |||||||||||| ||||  | |||||||||||||  || |||||||||||| |||  ||||| |||| |||||| || || ||||||||    
T  3798986 tgaatgtataaaaacataaatcattttatcttcaactcacttttaatcagaatcaattcacttaaatataatttttgttaccacataaccacacatacac 3799085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 10874339 - 10874234
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    |||||||||| || || ||||| ||| ||||| ||| ||||| ||| ||||||||||  || | ||| |||||||||||||| || || |||| ||||||    
T  10874339 tagcttttgactccaggactgattttcacactcaaaattattattcgactcactttt--acctaaatatatccaaacataaaccacttcacattcaactc 10874242  T
Q  207 acttttac 214  Q
    || |||||    
T  10874241 acatttac 10874234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 12766689 - 12766640
Alignment:
Q  136 acttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataa 187  Q
    |||||||||||||||| ||||||||||| ||  |||||||||| ||||||||    
T  12766689 acttaaatttattgtttaactcacttttgca--tgaatgtatcaaaacataa 12766640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 17225878 - 17225947
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatc 178  Q
    ||||||||||||| |||| ||| |||||||   |||||||| |||||||||| |||||||  ||||||||||    
T  17225878 tagcttttgattctagaattgatttttacatacaaatttatagttcaactcagttttaca--tgaatgtatc 17225947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 17830058 - 17829995
Alignment:
Q  180 aaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  17830058 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 17829995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 21254945 - 21254906
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  21254945 tgtatccaaacataaatcaa-ttacattcaactcactttta 21254906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 25195870 - 25195930
Alignment:
Q  101 gattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcactt 161  Q
    |||| |||||||||||||| |||| ||| || |||||  |||||||| |||||||||||||    
T  25195870 gatttatagcttttgattctagaattgaattgtacacacaaatttatagttcaactcactt 25195930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 29682202 - 29682269
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    ||||||||||| |||||||||||||  ||||||| |||||  || |||||||||  ||||||||||||    
T  29682202 gtatccaaacacaaatcaatttacacgcaactcaattttaaccaaaatcaattctatcaaaattaatt 29682269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 33136508 - 33136460
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaa 188  Q
    |||||||||||||||||||| |||||   ||||||||||| ||||||||    
T  33136508 aaatttattgttcaactcacgtttacgtatgaatgtatccgaacataaa 33136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 33997282 - 33997326
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| ||| |||||| || ||||||||||    
T  33997282 tgaatgtatccaaacataaaccaaattacattcatctcactttta 33997326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 15220896 - 15220817
Alignment:
Q  131 tttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||| |||| |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||| ||||||||||||    
T  15220896 tttagacttcaatttattgttcaactcactttaaca--tgaatgtatccaaacataaatcactttacattcaactcactttt 15220817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 7629919 - 7630021
Alignment:
Q  131 tttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaa-tcaatttacatccaactcacttttacataatcaattcactc 229  Q
    |||||||| ||||| ||||||||| ||||||||||  |  ||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||||    
T  7629919 tttacactcaaattcattgttcaattcacttttac--gaaaatatatccaaacataaaatcactttacattcaactcacttttacataatcaatttactc 7630016  T
Q  230 aaaat 234  Q
    |||||    
T  7630017 aaaat 7630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 42740977 - 42741062
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    |||||| | |||||||||||||||  ||||||||||||| |||| ||| ||||||||| ||||||| ||| |||||||||||||||    
T  42740977 ttgattctacttgaagctaagatttgtagcttttgattctagaattgatttttacactcaaatttactgtccaactcacttttaca 42741062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 44439263 - 44439381
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    ||||||||||| |||   |||||||||||| | || ||| ||| ||||| |||||||||||||||||||||||||||  | ||  |||||||||||||||    
T  44439263 cttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgttcaactcacttttaca--taaacatatccaaacataaat 44439360  T
Q  190 caatttacatccaactcactt 210  Q
    || |||||||  |||||||||    
T  44439361 cactttacatttaactcactt 44439381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 1976900 - 1976797
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcac 227  Q
    ||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||| ||  ||||| | ||||||| || ||  || |||||||||||    
T  1976900 ttttacactcaaatttattgttgaactcacttttaca--tgaatgtatccaaacataagtcgctttaccttcaactcaattctagccagaatcaattcac 1976803  T
Q  228 tcaaaa 233  Q
    ||||||    
T  1976802 tcaaaa 1976797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 3853939 - 3854012
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattc 240  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  || |||||||||  ||||||| |||||    
T  3853939 tgaatgtatccaaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaattc 3854012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 269
Target Start/End: Complemental strand, 3476487 - 3476326
Alignment:
Q  108 agcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    |||||||||||| |||| | | ||||||| | |||| |||||||||||| |||| |  |  | |||||||| ||||||| |||| || || | || ||||    
T  3476487 agcttttgattctagaatttatttttacattcaaatgtattgttcaactaacttgtgta--taaatgtatctaaacatatatcacttcactttcagctca 3476390  T
Q  208 ctttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacaccaa 269  Q
    ||||||  || |||||||||||| ||||| |||| |||||||||||||| |||||| |||||||    
T  3476389 cttttatccagaatcaattcacttaaaatcaatttttgtcaccacagaaccaaacaaacaccaa 3476326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 16518823 - 16518908
Alignment:
Q  126 tgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||| |  |||||||| ||||||||||||||||||  |||||||||||||||| |||||| |||||   |||||||||||||    
T  16518823 tgacttttacgcacaaatttatagttcaactcacttttaca--tgaatgtatccaaacacaaatcattttaccctcaactcactttta 16518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 30503187 - 30503360
Alignment:
Q  59 agaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactca 158  Q
    |||| |||| || ||| |||| |||||| | |||||||| | ||||| ||||||||||||| |||| ||| |||||||| | ||||||   || ||||||    
T  30503187 agaaatgattttgcctccaaaattgattctacttgaagccaggattcgtagcttttgattcaagaattgatttttacacatgaatttaaacttgaactca 30503286  T
Q  159 cttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaat 234  Q
     |||||||||   || |||||||||| |||||| ||||| | ||||| |||||||  || ||||||||||||||||||    
T  30503287 tttttacacg---at-tatccaaacaaaaatcagtttaccttcaactaacttttagtcagaatcaattcactcaaaat 30503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 10918649 - 10918715
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattc 240  Q
    |||||||||||||||| ||||||| |||||||||||||  || |||||||||| |||||||||||||    
T  10918649 atccaaacataaatcactttacattcaactcacttttatccaaaatcaattcagtcaaaattaattc 10918715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 38600508 - 38600439
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattc 240  Q
    ||||| |||||||||||||||||||||| ||||||||||||  || ||||||||| |||||| |||||||    
T  38600508 tgtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaacttaattc 38600439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 4908846 - 4908920
Alignment:
Q  137 cttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| ||||||||||||  |||||| |||  ||||||||||||||||||||||| |||||||  ||||||||||||    
T  4908846 cttaactttattgttcaatccactttaaca--tgaatgtatccaaacataaatcactttacatgaaactcactttta 4908920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42774996 - 42774951
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttgc 46  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  42774996 aaattgattctagaggtatagaattgattttgacatgttccgttgc 42774951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 9988566 - 9988526
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  9988566 tgtatccaaacataaatcaattcacatccaactcactttta 9988526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 42982570 - 42982643
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaa 182  Q
    ||||||||||||| |||| ||| ||||||||  ||||||||| | |||||||||||||||  ||||||||||||||    
T  42982570 tagcttttgattccagaattgatttttacacacaaatttattttacaactcacttttaca--tgaatgtatccaaa 42982643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 1945104 - 1945034
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  1945104 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 1945034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 5916306 - 5916237
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| |||||| |||| |||||||||||||  || ||||||||| |||||||||||||||    
T  5916306 tgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattct 5916237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 26207994 - 26207924
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||| ||||||||||||||| |||||||||| |||||||  || || |||||| |||||||||||||||    
T  26207994 tgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattct 26207924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 33019241 - 33019133
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    ||||||||  |||||||||  |||  ||||||||| ||  |||| ||| ||| |||| ||||||||| ||||||||||||||||||  |||||| |||||    
T  33019241 ttgattatatttgaagctagaatttgtagcttttggttttagaattgattttcacacataaatttatagttcaactcacttttaca--tgaatgcatcca 33019144  T
Q  181 aacataaatca 191  Q
    |||| ||||||    
T  33019143 aacacaaatca 33019133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 33502266 - 33502364
Alignment:
Q  110 cttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcact 209  Q
    |||||||||| | || ||| ||||||||  | |||||| ||||||||||||||||||     ||||||||||||| |||||| ||||||| ||||| |||    
T  33502266 cttttgattctaaaattgatttttacacacatatttatagttcaactcacttttaca-----atgtatccaaacacaaatcactttacattcaacttact 33502360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 36312320 - 36312389
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| |||||| |||| |||||||||||||  || ||||||||| |||||||||||||||    
T  36312320 tgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattct 36312389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 42741091 - 42741142
Alignment:
Q  215 ataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||| ||||||||| ||||||||||||| || ||||||||||||||    
T  42741091 ataatcaatttactcaaaatcaattcttgtcaccccaaaatcaaacatacac 42741142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 4894216 - 4894090
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    ||||||||||||| | || ||| | ||| ||| ||||||||| ||||| ||||||||| |  |||||||||| |||||||||||| ||||| | |||||     
T  4894216 tagcttttgattctataattgattattatactcaaatttattattcaagtcacttttaaa--tgaatgtatctaaacataaatcactttaccttcaactt 4894119  T
Q  207 actttta--cataatcaattcactcaaaa 233  Q
    | |||||   | |||||||||||||||||    
T  4894118 aattttagctagaatcaattcactcaaaa 4894090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 16467131 - 16467169
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  16467131 tatccaaacataaatcaatttacatctaactcactttta 16467169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 31224725 - 31224763
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31224725 tatccaaacataaatcaattcacatccaactcactttta 31224763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 41580775 - 41580714
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    ||||||||||||||||| |||||||||| ||||||||||||  || ||||||||| ||||||    
T  41580775 tgtatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaa 41580714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 28261338 - 28261398
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    ||||||||| ||||||||||| ||||||||||||||||||  || ||||||||| ||||||    
T  28261338 gtatccaaatataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaa 28261398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 37745841 - 37745784
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||||||||||||||||||| |||| || ||||| || || |||||||||||    
T  37745841 ttttacataatcaattcactcaaaatcaattattatcaccgcaaaaccaaacatacac 37745784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 7632818 - 7632899
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||| || ||||||||||||||||||||||||  |  |||||||||||| |||| || |||| || ||| |||||||||    
T  7632818 ttttacactcaagtttattgttcaactcacttttacaaat--atgtatccaaacgtaaaccactttaaattcaaatcactttta 7632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 23359999 - 23359955
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  23359999 tgaaggtatccaaacataaatcactttacattcaactcactttta 23359955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 23377543 - 23377587
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||    
T  23377543 tgaaggtatccaaacataaatcaacttacattcaactcactttta 23377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 32307133 - 32307214
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||| ||||||||||||||||||||||  | |||||| |||||||| ||||  || ||||||| | ||||| |||||    
T  32307133 ttttacacttatatttattgttcaactcactttt--atgtgaatttatccaaatataagccattttacattcgactcaatttta 32307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 34433371 - 34433331
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  34433371 tgtatccaaacataaatcaattcacattcaactcactttta 34433331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 2213549 - 2213588
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  2213549 tgtatccaaacataaatcaattcacattcaactcactttt 2213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 7295413 - 7295343
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||||||| || |||||| |||||  || ||||||||| |||||| | ||||||    
T  7295413 tgtatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaattct 7295343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 8170356 - 8170425
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| ||||||||||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  8170356 tgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 8170425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 25747946 - 25747877
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||| |||||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  25747946 tgtatccaaacataaatcaa-ttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 25747877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 28127352 - 28127313
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  28127352 tgtatccaaacataaatcaattcacattcaactcactttt 28127313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37420358 - 37420319
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  37420358 aaattgattctagaggtgtagaattgattttgacatgttt 37420319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 40401666 - 40401622
Alignment:
Q  143 tttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  40401666 tttattgttcaactgacttttaca--tgaatgtatccaaacataaat 40401622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 7296198 - 7296259
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    |||||||||||||||||||||| ||||| |||||| |||||  || ||||||||| ||||||    
T  7296198 tgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaa 7296259  T

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Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 27911451 - 27911489
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  27911451 tatccaaacataaatcaattcacatcaaactcactttta 27911489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 32798544 - 32798510
Alignment:
Q  130 ttttacacttaaatttattgttcaactcactttta 164  Q
    ||||||||||| |||||||||||||||||||||||    
T  32798544 ttttacacttatatttattgttcaactcactttta 32798510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 36548243 - 36548312
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||| |||||  |||||||||||  || ||||||||| |||||| | ||||||    
T  36548243 gtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattct 36548312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 42089591 - 42089553
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  42089591 tatccaaacataaatcaattcacattcaactcactttta 42089553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 45714733 - 45714672
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    |||||||||||||||||||||| ||||| |||||| |||||  || ||||||||| ||||||    
T  45714733 tgtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaa 45714672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 2215295 - 2215355
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaa 231  Q
    |||||||||||||||||||||| || || ||||||||||||  || ||||||||| |||||    
T  2215295 tgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaa 2215355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 680233 - 680177
Alignment:
Q  210 tttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||||||||||||||||||||||| ||||  | |||| ||| || |||||||||||    
T  680233 tttacataatcaattcactcaaaatcaatttctctcacaacataaccaaacatacac 680177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 11240709 - 11240753
Alignment:
Q  168 gtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||| |||||||||||||||| |||| |||||| |||||    
T  11240709 gtgaatgtattcaaacataaatcaattcacattcaactcgctttt 11240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 11650713 - 11650677
Alignment:
Q  210 tttacataatcaattcactcaaaattaattcttgtca 246  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  11650713 tttacataatcaattcactcaaaatcaatttttgtca 11650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 13475924 - 13475956
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttt 162  Q
    ||||||||||||||||||||||||| |||||||    
T  13475924 ttttacacttaaatttattgttcaaatcacttt 13475956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15928595 - 15928551
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttg 45  Q
    ||||||||||| ||| | |||||||||||||||||||||| ||||    
T  15928595 aaattgattctggaggtgtagaattgattttgacatgtttggttg 15928551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 30007618 - 30007578
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  30007618 tgtaaccaaacataaatcaattcacattcaactcactttta 30007578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 30599968 - 30599901
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    ||||||||||| ||||||||| |||  |||||||||||||  || |||||||||  ||||||||||||    
T  30599968 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattctatcaaaattaatt 30599901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 37420240 - 37420196
Alignment:
Q  121 agaactgacttttacacttaaatttattgttcaactcacttttac 165  Q
    |||| ||| ||||||||| ||||||||| ||||||||||||||||    
T  37420240 agaattgatttttacactcaaatttattattcaactcacttttac 37420196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 39106739 - 39106695
Alignment:
Q  168 gtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||| || ||||||| ||| |||||||||||    
T  39106739 gtgaatgtatccaaacattaaacaatttatatcaaactcactttt 39106695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 42650398 - 42650430
Alignment:
Q  210 tttacataatcaattcactcaaaattaattctt 242  Q
    ||||||||||||||||||||||||| |||||||    
T  42650398 tttacataatcaattcactcaaaatcaattctt 42650430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 14173 - 14075
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactc 206  Q
    |||||| |||||| |||| ||| ||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||| ||||| | ||||||    
T  14173 tagcttatgattctagaattgatttttacactcaaatttatttttcaactcacttt--cacatgaatgtatccaaacataaatcactttaccttcaactc 14076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 9e-19; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 150 - 270
Target Start/End: Original strand, 34915135 - 34915255
Alignment:
Q  150 ttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcac 247  Q
    |||||||||||||||||  ||||||||| ||||||||||||| ||||| | |||||||||||||  ||| || |||||||| ||||| |||||| ||||     
T  34915135 ttcaactcacttttaca--tgaatgtattcaaacataaatcattttacctgcaactcacttttagtcattataaattcacttaaaatcaattctagtcaa 34915232  T
Q  248 cacagaatcaaacatacaccaag 270  Q
      ||||| |||||||||||||||    
T  34915233 agcagaaccaaacatacaccaag 34915255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 47978426 - 47978334
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcacttttac--ataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||| ||||||||| ||||||| ||||||||||||||  | |||||||||||||||||| ||||||||||||| || || || ||||||||    
T  47978426 atccaaccataaatcactttacattcaactcacttttacccaaaatcaattcactcaaaatgaattcttgtcaccgcaaaaccatacatacac 47978334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 3016188 - 3016265
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacata 186  Q
    ||||||||||||| |||| |||  ||||||| ||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  3016188 tagcttttgattctagaattgatgtttacacataaatttacggttcaactcacttttaca--tgaatgtatccaaacata 3016265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 14644854 - 14644906
Alignment:
Q  214 cataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  14644854 cataatcaattcacttaaaattaattcttgtcaccgcaaaatcaaacatacac 14644906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 20800345 - 20800275
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||||| ||||||    
T  20800345 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 20800275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 31223432 - 31223502
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  31223432 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 31223502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 35569270 - 35569200
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||||| ||||||    
T  35569270 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 35569200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 42850287 - 42850217
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||| ||| | ||||||    
T  42850287 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattct 42850217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 6932210 - 6932096
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaa 237  Q
    |||| ||||||||||||||| |||||||  ||||| ||||||||  | |||| ||||||| |||||||||||||  || |||||||||| ||||||| ||    
T  6932210 aaatctattgttcaactcacctttacac--gaatgaatccaaacgaagatcattttacattcaactcacttttagtcagaatcaattcattcaaaatcaa 6932113  T
Q  238 ttcttgtcaccacagaa 254  Q
     | |||||||| |||||    
T  6932112 attttgtcaccgcagaa 6932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 232
Target Start/End: Complemental strand, 28287412 - 28287267
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttac-acgtgaatgtatccaaacataaa 188  Q
    |||||||| | ||||  ||||||||||||  |||| ||| ||| ||||| ||||||||||||||||| |||||||| || | ||| |||| |||||||||    
T  28287412 cttgaagcaaggatttgtagcttttgattttagaattgattttaacactcaaatttattgttcaactaacttttactacataaatatatctaaacataaa 28287313  T
Q  189 tcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
      | ||| ||| |||||||||||||   | ||||||||||||||||    
T  28287312 ctagtttccattcaactcacttttagctagaatcaattcactcaaa 28287267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 40662940 - 40662891
Alignment:
Q  217 aatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  40662940 aatcaattcactcaaaattaattcttgtcaaaacagaaccaaacatacac 40662891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 1514352 - 1514449
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    |||||||||| ||||  |||||||| |||  | || ||| ||||||||  ||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  1514352 cttgaagctaggatttgtagctttttattatataattgatttttacacacaaatttattgttcaactcatttttaca--tgaatgtatccaaacacaaat 1514449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 5410697 - 5410737
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  5410697 tgtattcaaacataaatcaatttacatccaactcactttta 5410737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 7524122 - 7524227
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    ||||||| || ||||  ||||||||||||  |||| ||| ||||||||  |||||||| ||||||||||||||||||  | ||||| |||||||| ||||    
T  7524122 cttgaagttaggatttgtagcttttgattatagaattgatttttacacacaaatttatagttcaactcacttttaca--taaatgtgtccaaacacaaat 7524219  T
Q  190 caatttac 197  Q
    || |||||    
T  7524220 cactttac 7524227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 15884285 - 15884325
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15884285 tgtatccaaacataaatcaattcacatccaactcactttta 15884325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 27801717 - 27801650
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||||| || ||||| ||||||    
T  27801717 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattct 27801650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 213594 - 213522
Alignment:
Q  109 gcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaac 183  Q
    ||||||||||| |||| ||| ||||| ||| |||||| ||||||||||||||||||||  |||||| ||||||||    
T  213594 gcttttgattctagaattgatttttaaactcaaatttgttgttcaactcacttttaca--tgaatgcatccaaac 213522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 11049259 - 11049347
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    |||||||||| ||||  ||||||||||||| | || ||| ||||||||  |||||||| |||||| ||||||||  |||||||||||||||    
T  11049259 cttgaagctaggatttgtagcttttgattctaaaattgatttttacacacaaatttatagttcaagtcactttt--acgtgaatgtatcca 11049347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 30557514 - 30557610
Alignment:
Q  91 ttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatc 190  Q
    ||||||||| ||||  ||| ||||||||| |||| ||| ||| ||||  |||||||| |||||||||||||||| |  |||||||||||||||| |||||    
T  30557514 ttgaagctaggatttgtagtttttgattctagaattgattttcacac--aaatttatagttcaactcacttttata--tgaatgtatccaaacacaaatc 30557609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 48549038 - 48548975
Alignment:
Q  142 atttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    |||||||||||||||||||||||||  | |||||||| |||||||||||| ||||| | |||||||    
T  48549038 atttattgttcaactcacttttaca--taaatgtatcaaaacataaatcattttaccttcaactca 48548975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 50845207 - 50845315
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcacttttac-ataatcaattcact 228  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||| |||||||| ||||| ||| ||||| | |||| | |||| || | |||||||||| |    
T  50845207 ttttatacttaaatttattgttcaactca-tttta-acgtgaacgtatccaaccataattcattttaccttcaaccccctttaactaaaatcaattcaat 50845304  T
Q  229 caaaattaatt 239  Q
    |||||| ||||    
T  50845305 caaaatcaatt 50845315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 213300 - 213250
Alignment:
Q  147 ttgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacat 199  Q
    ||||||||||||||||||||  || |||||||||||||||||||| |||||||    
T  213300 ttgttcaactcacttttaca--tgcatgtatccaaacataaatcactttacat 213250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 5268279 - 5268349
Alignment:
Q  141 aatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| ||| |||||||||||||||||  ||||| ||| |||||| |||||| ||||||| |||||||||||||    
T  5268279 aattcatttttcaactcacttttaca--tgaatatattcaaacaaaaatcactttacattcaactcactttta 5268349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 29759710 - 29759762
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaatt 224  Q
    |||||||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  29759710 gtatccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 1199885 - 1199925
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  1199885 tgtatccaaacataaatcaattcacattcaactcactttta 1199925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 1233354 - 1233411
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    ||||||||| |||||||||||| ||||||||||  ||| |||||||||| ||||||||||    
T  1233354 ttttacactcaaatttattgttgaactcacttt--cacatgaatgtatctaaacataaat 1233411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 4347028 - 4347072
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  4347028 tgaaggtatccaaacataaatcactttacattcaactcactttta 4347072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 6021813 - 6021914
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    |||||||||| |||   ||||||||||||| | ||  || ||||||||| || ||||| |||||||||||||||||      ||||||||||||| ||||    
T  6021813 cttgaagctaggatatgtagcttttgattctataatagatttttacactcaagtttatggttcaactcacttttac------atgtatccaaacacaaat 6021906  T
Q  190 caatttac 197  Q
    ||||||||    
T  6021907 caatttac 6021914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 12468270 - 12468310
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  12468270 tgtatccaaatataaatcaatttacatcaaactcactttta 12468310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 26058302 - 26058369
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||||||||| || |||||||||  || ||||||||| || ||||| ||||||    
T  26058302 atccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaattct 26058369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 32088713 - 32088580
Alignment:
Q  22 aattgattttgacatgtttcgttgcctggccttaagtagaattgatattcccttcaaagttgattatg-cttgaagctaagattcatagcttttgattcg 120  Q
    ||||||||||||||||||| |||||     || ||||||||||||| |||| | |||| |||||| |  |||||||||| ||||   |||||||||||      
T  32088713 aattgattttgacatgtttggttgct----ctcaagtagaattgattttcc-tacaaaattgattctaacttgaagctaggatttcgagcttttgatt-- 32088621  T
Q  121 agaactgacttttacacttaaatttattgttcaactcactt 161  Q
    | || ||| ||||||||| ||||||||||||||||||||||    
T  32088620 aaaagtgatttttacactgaaatttattgttcaactcactt 32088580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 35961437 - 35961498
Alignment:
Q  150 ttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||  |||||||||  |||||||||||| ||||| | |||||||||||||    
T  35961437 ttcaactcacttttaca--tgaatgtatagaaacataaatcattttaccttcaactcactttta 35961498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 44786946 - 44786873
Alignment:
Q  138 ttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||| ||||| || |||||||||||  ||||||||| | ||||||||||| ||||||| ||||||| |||||    
T  44786946 ttaaatttgttgttgaattcacttttaca--tgaatgtattcgaacataaatcattttacattcaactcattttta 44786873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 48510966 - 48511006
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  48510966 tgtatccaaacataaatcaattcacattcaactcactttta 48511006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 49243052 - 49242989
Alignment:
Q  171 aatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 232  Q
    ||||||| |||||||||||||||| |||||||||||| |||||  || ||||||||| ||||||    
T  49243052 aatgtattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaa 49242989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 52263683 - 52263626
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    ||||||||| |||||||||||| |||||| |||||||  | |||||||||||||||||||    
T  52263683 ttttacactcaaatttattgtttaactcagttttaca--ttaatgtatccaaacataaat 52263626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8381908 - 8381947
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  8381908 aaattgattctagaggtataaaattgattttgacatgttt 8381947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 10324997 - 10324938
Alignment:
Q  107 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttaca 166  Q
    ||||||||||||| | || ||| ||||||||| ||||||||||||  |||||||||||||    
T  10324997 tagcttttgattctataattgatttttacactcaaatttattgttatactcacttttaca 10324938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 10470648 - 10470717
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||| ||||||||||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  10470648 tgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 10470717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 37131860 - 37131903
Alignment:
Q  3 attgattctagagatatagaattgattttgacatgtttcgttgc 46  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||    
T  37131860 attgattctagaggtatagaattgattttggcatgtttggttgc 37131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 47123444 - 47123514
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||| ||||||||| ||||| ||||||||||||  || ||||||||| |||||| | ||||||    
T  47123444 tgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattct 47123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 7826417 - 7826352
Alignment:
Q  178 ccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||| ||||| | ||||||||||  || ||||||||| |||||||| ||||||    
T  7826417 ccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattct 7826352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 34571209 - 34571138
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||| ||||||||||   | || ||||||||| |||||| || |||||| |||||||||||||    
T  34571209 aaatttattgttcaattcacttttacc--taaacgtatccaaatataaatgaacttacattcaactcactttta 34571138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 34875115 - 34875044
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||| ||||||| ||  ||||| |||||||| |||||||| ||||||  ||||| |||||||    
T  34875115 aaatttattgttcaacccacttttgca--tgaatttatccaaagataaatcactttacaatcaactgactttta 34875044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 7524263 - 7524312
Alignment:
Q  217 aatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    ||||| ||||| |||||| |||| |||||||||||||| |||||||||||    
T  7524263 aatcagttcacccaaaatcaattattgtcaccacagaaccaaacatacac 7524312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 7765350 - 7765298
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaatt 224  Q
    ||||||||||| |||||| ||| |||||||||||||||||  |||||||||||    
T  7765350 gtatccaaacaaaaatcacttttcatccaactcacttttattcataatcaatt 7765298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 7790753 - 7790644
Alignment:
Q  55 aagtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaa 154  Q
    ||||| ||||||||||  ||| | | |||||| | ||||||| || ||||  ||| ||| ||||| | || ||| ||||||||  |||||||||||||||    
T  7790753 aagtataattgatattgtctttagaattgattctacttgaagttatgatttgtagatttagattctataattgatttttacacacaaatttattgttcaa 7790654  T
Q  155 ctcactttta 164  Q
    ||||||||||    
T  7790653 ctcactttta 7790644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 24587965 - 24588051
Alignment:
Q  134 acacttaaatttattgttcaactcacttttacacgtgaatgtat-ccaaacataaatcaatttacatccaactcacttttacataatca 221  Q
    ||||| ||||||||| |||||||||||||||||  ||||  ||| | |||||||||||| || |||| ||| ||||||||||| |||||    
T  24587965 acactcaaatttattattcaactcacttttaca--tgaacctatgcaaaacataaatcacttaacattcaaatcacttttacaaaatca 24588051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 28083998 - 28083830
Alignment:
Q  56 agtagaattgatattcccttcaaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaac 155  Q
    |||||||||||| ||  ||||  | |||||| | ||||||||||  |||  ||||||||||||| | || | | ||||||||  ||||||   ||||| |    
T  28083998 agtagaattgattttgtcttcgtaattgattctacttgaagctagaatttgtagcttttgattctataattaatttttacacacaaatttcaagttcagc 28083899  T
Q  156 tcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattc 225  Q
    |||||||||||  ||||| |||||||||| |||| ||||||||| ||| ||||| |||  ||||||||||||    
T  28083898 tcacttttaca--tgaatatatccaaacacaaat-aatttacattcaattcactcttagtcataatcaattc 28083830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 32365143 - 32365176
Alignment:
Q  179 caaacataaatcaatttacatccaactcactttt 212  Q
    ||||||||||||||||||||| ||||||||||||    
T  32365143 caaacataaatcaatttacattcaactcactttt 32365176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 43728943 - 43728876
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||| |||||| ||||||||||||||||||  || ||||||||| |||||| | ||||||    
T  43728943 tatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattct 43728876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 47899395 - 47899432
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtca 246  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  47899395 ttttacaaaatcaattcactcaaaatcaattcttgtca 47899432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 3515949 - 3516005
Alignment:
Q  209 ttttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacataca 265  Q
    |||||||||||||||||||||||||  ||||||  ||||| || || ||||||||||    
T  3515949 ttttacataatcaattcactcaaaaccaattctaatcaccgcataaccaaacataca 3516005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 4369865 - 4369803
Alignment:
Q  178 ccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    ||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||||| ||||    
T  4369865 ccaaacataaatcaattcacat-caactcacttttaaccaaaatcaattctctcaaaatcaatt 4369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 7931033 - 7930984
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatca 191  Q
    |||||||||||||||||||||||  ||||| ||||||| ||| |||||||||    
T  7931033 aaatttattgttcaactcacttt--cacgtaaatgtattcaatcataaatca 7930984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 11051379 - 11051339
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| |||||||||||||||| ||||| ||||||||||||    
T  11051379 tgtattcaaacataaatcaattcacatcaaactcactttta 11051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 12247478 - 12247517
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  12247478 tgtatccaaacataatt-aatttacatccaactcactttta 12247517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 18325132 - 18325063
Alignment:
Q  142 atttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||| |||||| ||||||||||  |||||||||||| |||||||||| |||| || ||| | |||||||    
T  18325132 atttattattcaacccacttttaca--tgaatgtatccatacataaatcactttatattcaagtgactttta 18325063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 23628773 - 23628734
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  23628773 tgtatccaaacataaatcaa-ttacattcaactcactttta 23628734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 25061285 - 25061352
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaatt 239  Q
    |||||||||||||||||||||||  | |||||||||||||  || ||||||||||  |||||| ||||    
T  25061285 gtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattcaaccaaaatcaatt 25061352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 27500334 - 27500370
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttaca 166  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  27500334 ttttacactcaaatttattgttcaactcatttttaca 27500370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 27962145 - 27962072
Alignment:
Q  137 cttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    ||||||||||| |||||||| | ||||| |||  |||||||||||||||||||||  | ||||  |||||||||||    
T  27962145 cttaaatttatagttcaactaatttttatacg--aatgtatccaaacataaatcatctaacatttaactcactttt 27962072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 33693088 - 33693132
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||||||||||||||||| ||||| | |||||| ||||||    
T  33693088 tgaatgtatccaaacataaatcactttacgttcaactcgctttta 33693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 34718509 - 34718549
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  34718509 tgtattcaaacataaatcaatttatatcaaactcactttta 34718549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 40229538 - 40229498
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| || || ||||||||||||    
T  40229538 tgtatccaaacataaatcaattcacctcaaactcactttta 40229498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 48832939 - 48833020
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    ||||||||| ||||||||| || ||||||| ||||   |||||| ||||| |||||||| || || |||| |||||||||||||    
T  48832939 ttttacactcaaatttattattgaactcacgtttat--gtgaatatatccgaacataaaccacttaacattcaactcactttta 48833020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 4306561 - 4306636
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactca 207  Q
    ||||||||||||||||||||||||| ||  |||||||  ||||||||||||||||||||||| ||||||| |||||||    
T  4306561 ttttacacttaaatttattgttcaattcttttttaca--tgaatgtatccaaacataaatcattttacattcaactca 4306636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 10372957 - 10373062
Alignment:
Q  140 aaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcacttttacataatcaattcactcaaaattaatt 239  Q
    ||||||||||||||||| |||||  |  || |||||||||||||||||| || ||||||| ||||||| ||||||| ||| |||||| | ||||| ||||    
T  10372957 aaatttattgttcaacttacttt--cgtgtaaatgtatccaaacataaaccagtttacattcaactcatttttacaaaattaattcatttaaaatcaatt 10373054  T
Q  240 cttgtcac 247  Q
     |||||||    
T  10373055 tttgtcac 10373062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 22482237 - 22482307
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| |||||||||||||  || ||||||||| |||||||| ||||||    
T  22482237 tgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 22482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 9818870 - 9818919
Alignment:
Q  217 aatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  9818870 aatcaattcactcaaaataaattcttgtcaccgcagaaccaaacatacac 9818919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 18637293 - 18637444
Alignment:
Q  90 cttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaat 189  Q
    ||||||||||||||   ||||||||||||| |||| ||| ||||||||  | |||||| |||||||||| ||||| |   |||| |||||||||| ||||    
T  18637293 cttgaagctaagataagtagcttttgattctagaattgatttttacac--acatttatagttcaactcaatttta-aaaagaatctatccaaacacaaat 18637389  T
Q  190 caatttacatccaactcactttta--cataatcaattcactcaaaattaattctt 242  Q
    || | |||   |||||||||||||   | |||||||||||||||||| |||||||    
T  18637390 cactgtactctcaactcacttttagttagaatcaattcactcaaaatcaattctt 18637444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 40495422 - 40495382
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  40495422 tgtatccaaacataaatcaatttacatcaaactcactttta 40495382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 3667902 - 3667972
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttt--acataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| ||||||||||||  ||| ||||||||| |||||| | ||||||    
T  3667902 tgtatccaaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaattct 3667972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 8591521 - 8591597
Alignment:
Q  121 agaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacat 199  Q
    |||| ||| |||| |||| |||||| |||||||||||||||||| | |  |||||||||||| ||||||||||||||||    
T  8591521 agaattgattttttcactcaaatttgttgttcaactcacttttatagg--aatgtatccaaatataaatcaatttacat 8591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 9952610 - 9952540
Alignment:
Q  193 tttacatccaactcactttta--cataatcaattcactcaaaattaattcttgtcaccacagaatcaaaca 261  Q
    ||||||| |||||||||||||  ||||||||||||| ||||||| |||| ||||||||  |||||||||||    
T  9952610 tttacatgcaactcacttttatccataatcaattcattcaaaatcaatttttgtcacccaagaatcaaaca 9952540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 41834940 - 41835010
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| || |||||||||||||||  || ||||||||| |||||| | ||||||    
T  41834940 tgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattct 41835010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3043165 - 3043120
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttgc 46  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||    
T  3043165 aaattgattctagaggtgtagaattgattttgacatgtttagttgc 3043120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 10898770 - 10898847
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactt 210  Q
    ||||||||  |||||||||||||||||||||||||||  ||||  |||||||||||||| |||||| | | ||||||||||    
T  10898770 ttttacacacaaatttattgttcaactcacttttaca--tgaa-ctatccaaacataaagcaatttgccttcaactcactt 10898847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 9275548 - 9275508
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  9275548 tgtatccaaacataaatcaattaacatctaactcactttta 9275508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 22811070 - 22811114
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  22811070 tgaaggtatccaaacataaatcactttacattcaactcactttta 22811114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 35139059 - 35138978
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||||  ||||||||||| ||||| | ||||||| |||||    
T  35139059 ttttccactcaaatttattgttcaactcacttt--catatgaatgtatctgaacataaatcattttaccttcaactcaatttta 35138978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 40885263 - 40885299
Alignment:
Q  177 tccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||| ||||||||||||||||||    
T  40885263 tccaaacataaatcaattcacatccaactcactttta 40885299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 4292197 - 4292267
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| |||| ||||| | |||||  || ||||||||| |||||| ||||||||    
T  4292197 tgtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaacttaattct 4292267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 7925435 - 7925501
Alignment:
Q  130 ttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatcaatttacat 199  Q
    ||||||||| |||||||||||||||||||||||   ||| ||||||| |||||||| ||| |||| ||||    
T  7925435 ttttacactcaaatttattgttcaactcacttt---acgggaatgtaaccaaacattaatgaattcacat 7925501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 8049115 - 8049045
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| || || ||||||||||||  || ||||||||| |||||| | ||||||    
T  8049115 tgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaattct 8049045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13224779 - 13224740
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgttt 40  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  13224779 aaattgattctagagatgtataattgattttgacatgttt 13224740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 23914318 - 23914248
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||| |||||||||| | |||||||||| |||||   ||||||||||| |||||||| ||||||    
T  23914318 tgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattct 23914248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 35760237 - 35760276
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttt 212  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  35760237 tgtatccaaacataaatcaattcacattcaactcactttt 35760276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 37886079 - 37886019
Alignment:
Q  125 ctgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataa 187  Q
    |||| ||||||| | ||||||||||||||||||||||||||||   ||||||| |||||||||    
T  37886079 ctgatttttacattgaaatttattgttcaactcacttttacac--aaatgtattcaaacataa 37886019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 38845438 - 38845552
Alignment:
Q  76 caaagttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgt 175  Q
    |||| |||||| | |||||||||||||||  ||| ||||||||| |||| ||| ||| ||||  |||| ||| ||| |||||||||||  || ||||| |    
T  38845438 caaaattgattctacttgaagctaagatttgtagtttttgattctagaattgattttcacacacaaatatatagttaaactcactttt-tacatgaatat 38845536  T
Q  176 atccaaacataaatca 191  Q
    ||||||||| ||||||    
T  38845537 atccaaacacaaatca 38845552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 39988031 - 39987961
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||||||||||||||||||||| || || ||||||||||||  || ||||||||| |||||| | ||||||    
T  39988031 tgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattct 39987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 2483776 - 2483738
Alignment:
Q  175 tatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  2483776 tatccaaacataaatcaattcacattcaactcactttta 2483738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 6951390 - 6951260
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatcca 180  Q
    |||||| | ||||||| || ||||  ||||||||||||| | || ||| || ||||| |||||||||  ||||| |||||||||||  ||||| ||||||    
T  6951390 ttgattctacttgaagttaggatttgtagcttttgattctataattgatttgtacacataaatttataattcaattcacttttaca--tgaatttatcca 6951293  T
Q  181 aacataaatcaatttacatccaactcactttta 213  Q
    || | || ||| ||||| | | |||||||||||    
T  6951292 aatacaagtcattttactttcgactcactttta 6951260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15368167 - 15368204
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgt 38  Q
    |||||||||||||| || ||||||||||||||||||||    
T  15368167 aaattgattctagatatgtagaattgattttgacatgt 15368204  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 19204067 - 19204015
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaatt 224  Q
    ||||||||||| |||||| ||| |||||||||||||||||  |||||||||||    
T  19204067 gtatccaaacaaaaatcacttttcatccaactcacttttattcataatcaatt 19204015  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 32560336 - 32560284
Alignment:
Q  174 gtatccaaacataaatcaatttacatccaactcactttta--cataatcaatt 224  Q
    ||||||||||| |||||||||| |||||||||| ||||||  |||||||||||    
T  32560336 gtatccaaacaaaaatcaattttcatccaactcgcttttattcataatcaatt 32560284  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 117437 - 117384
Alignment:
Q  211 ttacataatcaattcactcaaaattaattcttgtcaccacagaatcaaacatacac 266  Q
    |||||||||||||||||||  ||| |||| |||||| ||||||| |||||||||||    
T  117437 ttacataatcaattcactc--aatcaatttttgtcaacacagaaccaaacatacac 117384  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 7178826 - 7178865
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  7178826 tgtatccaaacataaatcaa-ttacattcaactcactttta 7178865  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 9818734 - 9818818
Alignment:
Q  81 ttgattatgcttgaagctaagattcatagcttttgattcgagaactga-cttttacacttaaatttattgttcaactcactttta 164  Q
    |||||| | |||||||||| ||||  ||||||||||||| |||| |||  ||||| ||  |||||||| ||||||||||||||||    
T  9818734 ttgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcactttta 9818818  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 10058122 - 10058162
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  10058122 tgtatccaaacataaatcaattcatttccaactcactttta 10058162  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11911970 - 11911926
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttg 45  Q
    ||||||||||||||||| || ||||||||||||| ||||| ||||    
T  11911970 aaattgattctagagatgtaaaattgattttgacttgtttagttg 11911926  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 17741993 - 17741949
Alignment:
Q  217 aatcaattcactcaaaattaattcttgtcaccacagaatcaaaca 261  Q
    |||||||||| |||||||||||| |||| |||||| |||||||||    
T  17741993 aatcaattcattcaaaattaatttttgttaccacaaaatcaaaca 17741949  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 24045881 - 24045948
Alignment:
Q  176 atccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    ||||||||||||||||||| |||||  |||||||||||  || ||||||||| |||||| | ||||||    
T  24045881 atccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattct 24045948  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39097188 - 39097232
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttg 45  Q
    ||||||||| ||||| | |||||||||||||||||||||| ||||    
T  39097188 aaattgattatagaggtgtagaattgattttgacatgtttggttg 39097232  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 118477 - 118437
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  118477 tgtatccaaacataaatcaatttacatcaaactcactttta 118437  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 8483 - 8523
Alignment:
Q  173 tgtatccaaacataaatcaatttacatccaactcactttta 213  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  8483 tgtatccaaacataaatcaattcacatcaaactcactttta 8523  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 253158 - 253232
Alignment:
Q  169 tgaatgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 241  Q
    |||| ||||||||||||||||||||| | ||||||||||| ||||  || ||||||||| |||||| | ||||||    
T  253158 tgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattct 253232  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 23667 - 23548
Alignment:
Q  92 tgaagctaagattcatagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacgtgaatgtatccaaacataaatca 191  Q
    |||||||| ||||  |||||||||| || |||  ||| ||||| ||| ||||||||  ||||||||||||||  || | |||| |||| |||||||| |     
T  23667 tgaagctaggatttgtagcttttgaatctagacgtgatttttagactaaaatttatcattcaactcactttt--acttaaatgcatcctaacataaaccg 23570  T
Q  192 atttacatccaactcactttta 213  Q
     ||||||| |||||||||||||    
T  23569 ctttacattcaactcactttta 23548  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31750 - 31794
Alignment:
Q  1 aaattgattctagagatatagaattgattttgacatgtttcgttg 45  Q
    ||||||||||||||| | ||||||||||| |||||||||| ||||    
T  31750 aaattgattctagaggtgtagaattgattctgacatgtttggttg 31794  T

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