View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18131_high_9 (Length: 400)
Name: NF18131_high_9
Description: NF18131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18131_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 111 - 382
Target Start/End: Complemental strand, 44199658 - 44199387
Alignment:
| Q |
111 |
gtagttagttagcttaattattgtttttgtagcattggatgtgaattgaggacacatcacacacacatcaagaagatggttggaatatcttaaaacttaa |
210 |
Q |
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| T |
44199658 |
gtagttagttagcttaattattgtttttgtagcattggatgagaattgaggacacatcacacacaaatcaaaaagatggttggaatatcttaaaacttaa |
44199559 |
T |
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| Q |
211 |
gttagacctaatacttgatatcacacgagtataagttgaaaaataatattttacttgaaaagtatttttcaaagtatattatatctaatgtaagactctt |
310 |
Q |
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| T |
44199558 |
gttagacctaatatttgatatcacacgagtataagttgaaaaataatattttacttgaaaagtatttttcaaagtatattatatctaatgtaagactctt |
44199459 |
T |
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| Q |
311 |
aatggcgctcaccagtgtttggcataatcttgaggccaaagttgttgaaaatgatcaagaggggatccaacg |
382 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44199458 |
aatggcactcaccagtgtttggcataatcttgaggccaaagttgttgaaaatgatcaagaggggatccaacg |
44199387 |
T |
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