View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18132_low_27 (Length: 255)
Name: NF18132_low_27
Description: NF18132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18132_low_27 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 54218267 - 54218507
Alignment:
| Q |
15 |
caaagggaattattgaagttatctaagagaatcttggggccaaaccaagatacatgatgcaagaaggggcgttatacatgtaaaaccattgatgattcaa |
114 |
Q |
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| T |
54218267 |
caaagggaattattgaagttatctaagagaatcttggggccaaaccaagatacatgatgcgagaaggggcgttatacatgtaaaaccattgatgattcaa |
54218366 |
T |
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| Q |
115 |
ttttgattaaaggactttcattcctctacaaatggaatcaagcagaatgtgcaaaccatctttaataacattagttggttgcttggtaatgaagatacga |
214 |
Q |
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| T |
54218367 |
ttttgattaaaggactttcattcctctacaaatggaatcaagcagaatgtgcaaaccatctttaataacattagttggttgcttggtaatgaagatacga |
54218466 |
T |
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| Q |
215 |
tcaagtttttgatctgcgttccttacaataacttgacattc |
255 |
Q |
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| T |
54218467 |
tcaagtttttgatctgtgttccttacaataacttgacattc |
54218507 |
T |
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