View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18132_low_33 (Length: 210)
Name: NF18132_low_33
Description: NF18132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18132_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 8824416 - 8824544
Alignment:
| Q |
65 |
aaatggtttcatcatggagaatgagataccacatttgtaataatgtaacaactttaagagagtttatagattttacttattaaatacatgttttaaaaga |
164 |
Q |
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| T |
8824416 |
aaatggtttcatcatggagaatgagataccacatttgtaataatgtaacaactttaagagagtttatagattttacttattaaatacatgttttaaaaga |
8824515 |
T |
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| Q |
165 |
gggcaacatgttgctatttataacctatt |
193 |
Q |
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| T |
8824516 |
gggcaacatgttgctatttataacctatt |
8824544 |
T |
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