View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18138_high_19 (Length: 247)
Name: NF18138_high_19
Description: NF18138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18138_high_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 38632805 - 38633041
Alignment:
| Q |
11 |
gaacaagtaccacaggttttttagtcattctgttctcctctttagtttgttgaaatattggctgtcataatcatgaacatgagaaaaaccctaaggtatc |
110 |
Q |
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| T |
38632805 |
gaacaagtaccacaggttttttagtcattctgttctcctctttagtttgttgaaatattggctgtcataatcatgaacatgagaaaaaccctaaggtatc |
38632904 |
T |
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| Q |
111 |
ttccatagacttatgatgtaagattcaaggaaatggaaaaagaacaatgttgaaataaataagggagaagctgaagaaaccaataaaagtgataaaatgg |
210 |
Q |
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| T |
38632905 |
ttccatagacttatgatgtaagattcaaggaaatggaaaaagaacaatgttgaaataaataagggagaagctgaagaaaccaataaaagtgataaaatgg |
38633004 |
T |
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| Q |
211 |
ggcaacctggtgcttacaaagtaaagtacagtgggaa |
247 |
Q |
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| T |
38633005 |
ggcaacctggtgcttacaaagtaaagtacagtgggaa |
38633041 |
T |
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