View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18138_low_14 (Length: 257)
Name: NF18138_low_14
Description: NF18138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18138_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 9 - 242
Target Start/End: Complemental strand, 22325294 - 22325061
Alignment:
| Q |
9 |
gagatgaagacacaacaatctatattgatgcatctaaacaaactattatggcccataagtttgctcttggttcaaagtcaagtgtttttaaccaaatgtt |
108 |
Q |
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| T |
22325294 |
gagataaagacacaaaaatctatattgatgcatctaaacaaactattatggcccataagtatgctcttggttcaaagtcaagtgcttttaaccaaatgtt |
22325195 |
T |
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| Q |
109 |
caaggaggattctgctgatagtattatcatctcagatatgacaactataccatgtcaaatatttatagattacttctacgatatcgtgagagacgaggat |
208 |
Q |
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|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22325194 |
caaggaggattctgttgatagtattaccatctcagatatgacaactataccatgtcaaatatttatagattacttctacgatatcgtgagagacgaggat |
22325095 |
T |
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| Q |
209 |
cttctgaattatagtcaagagttattagaagctg |
242 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
22325094 |
cttctgaattatagtcaagagttattagaagctg |
22325061 |
T |
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