View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18146_high_7 (Length: 236)
Name: NF18146_high_7
Description: NF18146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18146_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40505953 - 40506173
Alignment:
| Q |
1 |
tattgattttggtggaaaatgcaatgaagaagaaatggtgggtacttacgggaatcagaagaaatgctcaagcatgtgaatgacaaatagcgctttgatg |
100 |
Q |
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| T |
40505953 |
tattgattttggtggaaaatgcaatgaagaagaaatggtgggtacttacgggaatcagaagaaatgctcaagcatgtgaatgacaaagagcgctttgatg |
40506052 |
T |
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| Q |
101 |
aaggagaggtgtggaagaaggaggtgccgccggaaactgacaaacaccctcttctggtggtaagtgaagtgcggtggcgaagtacgccgccattagtcgc |
200 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| |
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| T |
40506053 |
aaggagaggtgtggaagaaggaggttccgccggaaactgacaaacaccctcttctggtggtcagtgaagtgcggtggcgaagtaagccgccattcgtcgc |
40506152 |
T |
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| Q |
201 |
cggaatcttgaagcaggtggg |
221 |
Q |
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||||||| ||||||||||||| |
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| T |
40506153 |
cggaatcgtgaagcaggtggg |
40506173 |
T |
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