View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18146_low_3 (Length: 340)

Name: NF18146_low_3
Description: NF18146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18146_low_3
NF18146_low_3
[»] chr8 (5 HSPs)
chr8 (10-318)||(26136367-26136675)
chr8 (10-94)||(23540496-23540580)
chr8 (12-95)||(12669073-12669155)
chr8 (22-65)||(10660855-10660898)
chr8 (12-105)||(9217927-9218019)
[»] chr1 (2 HSPs)
chr1 (208-318)||(47381619-47381729)
chr1 (6-95)||(20145992-20146081)
[»] chr5 (5 HSPs)
chr5 (10-93)||(23210365-23210448)
chr5 (10-93)||(20058899-20058983)
chr5 (10-103)||(20064728-20064821)
chr5 (19-95)||(25951093-25951169)
chr5 (11-90)||(17167561-17167639)
[»] chr7 (8 HSPs)
chr7 (10-95)||(31443534-31443619)
chr7 (12-95)||(4173703-4173786)
chr7 (10-95)||(14987347-14987431)
chr7 (10-95)||(15416958-15417042)
chr7 (31-93)||(18151869-18151930)
chr7 (10-65)||(20145704-20145759)
chr7 (21-71)||(7524993-7525043)
chr7 (31-92)||(2546778-2546838)
[»] chr3 (7 HSPs)
chr3 (7-95)||(29614858-29614946)
chr3 (17-106)||(9033755-9033844)
chr3 (10-95)||(16244357-16244442)
chr3 (10-94)||(15686723-15686806)
chr3 (10-95)||(7148572-7148657)
chr3 (17-98)||(27718241-27718321)
chr3 (17-95)||(24699342-24699419)
[»] scaffold0555 (1 HSPs)
scaffold0555 (10-93)||(5943-6026)
[»] chr2 (5 HSPs)
chr2 (17-95)||(20378804-20378882)
chr2 (11-92)||(18929103-18929183)
chr2 (11-95)||(26650703-26650785)
chr2 (19-95)||(20489599-20489674)
chr2 (39-95)||(24543649-24543704)
[»] chr6 (4 HSPs)
chr6 (10-93)||(31126426-31126509)
chr6 (35-93)||(1177518-1177576)
chr6 (51-95)||(32783893-32783937)
chr6 (7-92)||(16177079-16177160)
[»] scaffold0264 (1 HSPs)
scaffold0264 (10-71)||(20678-20739)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-93)||(376453-376529)


Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 26136367 - 26136675
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagctacag 109  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26136367 aaaatgcacaacatgtcctaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagcaacag 26136466  T
Q  110 aacgtgaaagtgacatgatcgtgacccaacacaataaaataacgtgaatgtggctgaaaattctttttgaaaatagattttgaaaatttaaaatcaactt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26136467 aacgtgaaagtgacatgatcgtgacccaacacaataaaataacgtgaaagtggctgaaaattcttttttaaaatagattttgaaaatttaaaatcaactt 26136566  T
Q  210 acccacttaattatctgatagtttggagattaccttacataaacttcttttgaagttatgcttcagttttgtgctaaagagaatctgccaattattgtag 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26136567 acccacttaattatctgatagtttggagattaccttacataaacttcttttgaagttatgcttcagttttgtgctaaagagaatctgccaattattgtag 26136666  T
Q  310 agagcaata 318  Q
    |||||||||    
T  26136667 agagcaata 26136675  T

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Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 23540496 - 23540580
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacacc 94  Q
    |||||| |||||||||| ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||    
T  23540496 aaaatgcacaacatgtcctaggatctctggtttggtccttcatgttataatgaaaatcagtcagtatttgtttaccaaaaacacc 23540580  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 12669073 - 12669155
Alignment:
Q  12 aatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||| |||||||||  || ||| ||||||||| |||||||||| |||||||||| ||| | ||||| |||||||||||||||||    
T  12669073 aatgcacaacatgttctatgatttctggtttgatcctgcttgtaataatcaaaaccagcccgtatt-gtttaccaaaaacaccg 12669155  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 10660898 - 10660855
Alignment:
Q  22 atgtcttaggatctctggtttggtcctgcttgttataatcaaaa 65  Q
    ||||| |||||||||||||||||||||||| || ||||||||||    
T  10660898 atgtcctaggatctctggtttggtcctgctcgtaataatcaaaa 10660855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 9218019 - 9217927
Alignment:
Q  12 aatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagct 105  Q
    |||| |||| ||||| |||||| ||||||||| || |||| ||||||| ||||| ||| |  |||| |||||||||||||||| ||| ||||||    
T  9218019 aatgcacaatatgtcataggatttctggtttgatcatgctggttataaccaaaaccagcccttatt-gtttaccaaaaacaccaataaacagct 9217927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 47381619 - 47381729
Alignment:
Q  208 ttacccacttaattatctgatagtttggagattaccttacataaacttcttttgaagttatgcttcagttttgtgctaaagagaatctgccaattattgt 307  Q
    |||||||||||||| || | ||||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||||| ||| ||||||| |||    
T  47381619 ttacccacttaattgtccgctagtttggatattaccttacataaacttctttaaaagttatgcttcaattttgtgctaaagagagtctaccaattactgt 47381718  T
Q  308 agagagcaata 318  Q
    |||||||||||    
T  47381719 agagagcaata 47381729  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 20146081 - 20145992
Alignment:
Q  6 gaagaaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||| |||| |||||||||| |||||||||| |||| ||||| ||| ||||||| |||| || ||||||||||||| | ||||||||||    
T  20146081 gaagataatgcacaacatgtcctaggatctctagtttagtccttcttattataattaaaaccaatcggtatttgttttctaaaaacaccg 20145992  T

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Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 23210365 - 23210448
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23210365 aaaatgcacaacatgtcctaggatctctggtttcgtccttcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 23210448  T

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Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 20058899 - 20058983
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggta-tttgtttaccaaaaacac 93  Q
    |||||| |||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||| ||||||||||||||||||    
T  20058899 aaaatgcacaacatgtcataggatctctggtttggtcctttttgttataatgaaaaccagtcggtattttgtttaccaaaaacac 20058983  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 20064728 - 20064821
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacag 103  Q
    |||||| |||||||||| ||| || |||||||| ||||| ||||||||||||| || |||||||||||||||||||| ||| || |||| ||||    
T  20064728 aaaatgcacaacatgtcctagaatatctggttttgtccttcttgttataatcacaaccagtcggtatttgtttaccataaatactgataaacag 20064821  T

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Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 25951169 - 25951093
Alignment:
Q  19 aacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |  ||||| ||| ||||| ||||||||||||    
T  25951169 aacatgtcctaggatctctggtttgatcctgcttgttataatcaatactagtcgatatctgtttgccaaaaacaccg 25951093  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 17167561 - 17167639
Alignment:
Q  11 aaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaa 90  Q
    ||||| |||||||||| |||||| | ||||||  |||||||||| |||||||||||||| | ||| ||||||||||||||    
T  17167561 aaatgcacaacatgtcctaggatttatggttttatcctgcttgtaataatcaaaatcagcccgta-ttgtttaccaaaaa 17167639  T

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Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 31443534 - 31443619
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  31443534 aaaatgcacaacatgtcctaggatctctgatttggtccttcttgttataatcaaaaccagtcggtatttgtttaccaaaaacaccg 31443619  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 4173703 - 4173786
Alignment:
Q  12 aatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||| |||||||||  |||||||||||| |||||||| ||||||||||| || | |||||||||||||||||||||||||||||    
T  4173703 aatgcacaacatgtactaggatctctggattggtccttcttgttataataaacaccagtcggtatttgtttaccaaaaacaccg 4173786  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 14987347 - 14987431
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||| |||||||||||||||||| ||||| || |||||||||| ||  | ||| |||||||||||||||||||    
T  14987347 aaaatgcacaacatgtcctaggatctctggtttggtactgctcgtaataatcaaaaccaacccgta-ttgtttaccaaaaacaccg 14987431  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 15416958 - 15417042
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| |||||||||| |||||||||||||||||| ||||| || |||||||||| ||  | ||| |||||||||||||||||||    
T  15416958 aaaatgcacaacatgtcctaggatctctggtttggtactgctcgtaataatcaaaaccaacccgta-ttgtttaccaaaaacaccg 15417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 18151869 - 18151930
Alignment:
Q  31 gatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||||||||||||| ||||||| |||||||||||||| | ||| |||||||||||||||||    
T  18151869 gatctctggtttggtcatgcttgtaataatcaaaatcagcccgta-ttgtttaccaaaaacac 18151930  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 20145759 - 20145704
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaa 65  Q
    |||||| | ||||| || |||||||||||||||||||||||| || ||||||||||    
T  20145759 aaaatgcataacatatcctaggatctctggtttggtcctgctcgtaataatcaaaa 20145704  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 7524993 - 7525043
Alignment:
Q  21 catgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtc 71  Q
    ||||||||||||| ||||||||| |||| ||||| |||| |||||||||||    
T  7524993 catgtcttaggatttctggtttgatcctacttgtaataaccaaaatcagtc 7525043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 2546838 - 2546778
Alignment:
Q  31 gatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaaca 92  Q
    ||||| ||||||||||||||| || |||||||||||||| |  || ||||||||||||||||    
T  2546838 gatctatggtttggtcctgctcgtaataatcaaaatcagcccata-ttgtttaccaaaaaca 2546778  T

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Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 29614858 - 29614946
Alignment:
Q  7 aagaaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  29614858 aagaaaatgcacaacatgttttaggatatttggtttggtcctgcttgttataatcaaaagcagtcagtatttgtttaccaaaaacaccg 29614946  T

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Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 9033755 - 9033844
Alignment:
Q  17 acaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgatatacagcta 106  Q
    |||||||||| |||||||||| ||||||| || |||||||||||||||| ||||| |||||| ||||||| |||||| |||| |||||||    
T  9033755 acaacatgtcctaggatctctagtttggttcttcttgttataatcaaaaccagtcagtatttatttaccataaacactgataaacagcta 9033844  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 16244357 - 16244442
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| ||||||| || ||||||| |||||||||||||||||| ||||||||||| || ||   |||||||| ||||||||||||    
T  16244357 aaaatgcacaacatatcctaggatccctggtttggtcctgcttggtataatcaaaaccaatcaacatttgtttgccaaaaacaccg 16244442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 15686806 - 15686723
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacacc 94  Q
    |||||| |||||||||| ||||||||||| |||||||||||| || |||||||||||||| | ||| |||||  |||||||||||    
T  15686806 aaaatgcacaacatgtcctaggatctctgatttggtcctgctcgtaataatcaaaatcagcccgta-ttgttcgccaaaaacacc 15686723  T

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Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 7148657 - 7148572
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||| ||||||| |  |||||| ||| |||||||||||||||||||||| |||| || ||| ||| ||||| ||||||||||||    
T  7148657 aaaatgcacaacatattctaggatatcttgtttggtcctgcttgttataataaaaaacactcgatatctgtttgccaaaaacaccg 7148572  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 27718241 - 27718321
Alignment:
Q  17 acaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccgata 98  Q
    ||||||||||| || || |||| |||| || ||||||| ||||||||||||| ||  | |||||||||||||||||||||||    
T  27718241 acaacatgtctaagaatttctgatttgatcatgcttgtaataatcaaaatcaatc-ctttttgtttaccaaaaacaccgata 27718321  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 24699342 - 24699419
Alignment:
Q  17 acaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||| |||| ||  | ||| |||||||||||| ||||||    
T  24699342 acaacatgtcttaggatatctggtttgctcctgctcgtaataataaaaaccatcccgta-ttgtttaccaaacacaccg 24699419  T

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Target: scaffold0555 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 5943 - 6026
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||| |||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  5943 aaaatgcacaacatgtcctaggatctctagtttgctccttcttgttataatcaaaatcagtcggtatttgtttatcaaaaacac 6026  T

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Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 20378882 - 20378804
Alignment:
Q  17 acaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||||||| |||||||||| |||||||||| | |||||||||||||| || ||||||||||||||||||||||||||    
T  20378882 acaacatgtcctaggatctcttgtttggtccttcctgttataatcaaaaccaatcggtatttgtttaccaaaaacaccg 20378804  T

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Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 18929183 - 18929103
Alignment:
Q  11 aaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaaca 92  Q
    ||||| |||||||||| |||||||||||||||||||||||| || |||||||||| ||| | ||| ||||||||||||||||    
T  18929183 aaatgcacaacatgtcctaggatctctggtttggtcctgctcgtaataatcaaaaccagcccgta-ttgtttaccaaaaaca 18929103  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 26650785 - 26650703
Alignment:
Q  11 aaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||| |||||||||| |||||||||||| |||||| ||||  | |||||||||| ||| | ||| |||||||||||||||||||    
T  26650785 aaatgcacaacatgtcctaggatctctgg-ttggtcatgctcataataatcaaaaccagcccgta-ttgtttaccaaaaacaccg 26650703  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 20489599 - 20489674
Alignment:
Q  19 aacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    |||||||  ||||||||||||||||||| | ||||| ||||||||||  |  | ||| |||||||||||||||||||    
T  20489599 aacatgttctaggatctctggtttggtctttcttgtaataatcaaaactatcccgta-ttgtttaccaaaaacaccg 20489674  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 24543704 - 24543649
Alignment:
Q  39 gtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||| || ||||||| |||||||||||||| | ||||| |||||||||||||||||    
T  24543704 gtttgatcatgcttgtaataatcaaaatcagcccgtatt-gtttaccaaaaacaccg 24543649  T

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Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 31126426 - 31126509
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||| || |||| || |||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  31126426 aaaatgtactacatatcctaggatctctggtttgatccttcttgttataatcaaaatcagtctgtatttatttaccaaaaacac 31126509  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 1177518 - 1177576
Alignment:
Q  35 tctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||||||||||||||||||    
T  1177518 tctggtttggtccttcttattataatcaaaaccagtcagtatttgtttaccaaaaacac 1177576  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 32783937 - 32783893
Alignment:
Q  51 ttgttataatcaaaatcagtcggtatttgtttaccaaaaacaccg 95  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||    
T  32783937 ttgttataatcaaaaccagtcggtattagtttatcaaaaacaccg 32783893  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 16177160 - 16177079
Alignment:
Q  7 aagaaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaaca 92  Q
    |||| |||| ||||||| || |||||||| |||||||||||| ||||||| |||||||   | | |||||||||||||||||||||    
T  16177160 aagataatgcacaacatatcctaggatctatggtttggtccttcttgtta-aatcaaa---actaggtatttgtttaccaaaaaca 16177079  T

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Target: scaffold0264 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 20739 - 20678
Alignment:
Q  10 aaaatgaacaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtc 71  Q
    |||||| ||||||| || |||||||||||||||||||||| | || |||||||||| |||||    
T  20739 aaaatgcacaacatatcctaggatctctggtttggtcctgatcgtaataatcaaaaccagtc 20678  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 376453 - 376529
Alignment:
Q  17 acaacatgtcttaggatctctggtttggtcctgcttgttataatcaaaatcagtcggtatttgtttaccaaaaacac 93  Q
    |||||||||| |||||| ||||||||| |||| ||||| |||||||||| ||| |  |  |||||||||||||||||    
T  376453 acaacatgtcctaggatttctggtttgatcctccttgtaataatcaaaaccagccccttattgtttaccaaaaacac 376529  T

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