View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18147_low_3 (Length: 339)

Name: NF18147_low_3
Description: NF18147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18147_low_3
NF18147_low_3
[»] chr7 (35 HSPs)
chr7 (57-334)||(37727607-37727885)
chr7 (39-302)||(14270139-14270397)
chr7 (57-302)||(17232402-17232647)
chr7 (62-305)||(45847732-45847966)
chr7 (39-216)||(6170283-6170460)
chr7 (57-302)||(8468217-8468453)
chr7 (234-334)||(15439357-15439457)
chr7 (39-262)||(9389831-9390054)
chr7 (124-250)||(18302016-18302143)
chr7 (39-334)||(30820937-30821220)
chr7 (41-262)||(12371317-12371526)
chr7 (39-331)||(36685934-36686214)
chr7 (122-333)||(15213659-15213869)
chr7 (41-150)||(11066507-11066616)
chr7 (41-143)||(59303-59405)
chr7 (41-150)||(8852069-8852178)
chr7 (41-150)||(12128068-12128177)
chr7 (41-144)||(32434499-32434602)
chr7 (196-334)||(11085033-11085170)
chr7 (39-301)||(38480125-38480376)
chr7 (214-334)||(11092789-11092908)
chr7 (39-118)||(48811939-48812017)
chr7 (171-262)||(13148276-13148367)
chr7 (41-118)||(46386998-46387075)
chr7 (214-321)||(9320423-9320529)
chr7 (66-150)||(11392030-11392113)
chr7 (186-321)||(11391871-11392006)
chr7 (171-262)||(8851969-8852060)
chr7 (171-262)||(11066625-11066716)
chr7 (213-260)||(32434396-32434443)
chr7 (1-38)||(5294104-5294141)
chr7 (1-38)||(5295277-5295314)
chr7 (1-38)||(5296450-5296487)
chr7 (1-38)||(8471970-8472007)
chr7 (1-38)||(17235968-17236005)
[»] scaffold0116 (3 HSPs)
scaffold0116 (39-302)||(43879-44142)
scaffold0116 (238-334)||(43700-43796)
scaffold0116 (238-334)||(47620-47716)
[»] chr6 (21 HSPs)
chr6 (39-302)||(25956716-25956979)
chr6 (39-262)||(27850940-27851155)
chr6 (113-305)||(31630619-31630811)
chr6 (89-299)||(19399684-19399895)
chr6 (238-334)||(25956537-25956633)
chr6 (41-262)||(18708539-18708748)
chr6 (39-334)||(20734128-20734410)
chr6 (41-262)||(23151070-23151279)
chr6 (171-312)||(18927833-18927973)
chr6 (134-331)||(34296953-34297149)
chr6 (41-155)||(17318969-17319083)
chr6 (234-334)||(27851274-27851373)
chr6 (41-127)||(27323545-27323631)
chr6 (41-124)||(31733753-31733836)
chr6 (214-312)||(22421019-22421117)
chr6 (196-321)||(2201153-2201277)
chr6 (186-262)||(27322222-27322298)
chr6 (66-150)||(28708539-28708622)
chr6 (66-128)||(31733825-31733887)
chr6 (176-262)||(28708636-28708722)
chr6 (1-38)||(18324162-18324199)
[»] chr3 (45 HSPs)
chr3 (39-325)||(49389740-49390028)
chr3 (39-302)||(18439942-18440206)
chr3 (57-262)||(20630231-20630437)
chr3 (39-250)||(14500897-14501109)
chr3 (187-334)||(1988912-1989059)
chr3 (39-262)||(1465545-1465768)
chr3 (89-302)||(49969964-49970178)
chr3 (57-302)||(12269351-12269596)
chr3 (66-250)||(45796969-45797153)
chr3 (66-250)||(23413385-23413568)
chr3 (39-334)||(31224635-31224918)
chr3 (125-250)||(12852504-12852631)
chr3 (41-262)||(40807035-40807244)
chr3 (39-334)||(15447681-15447961)
chr3 (39-301)||(31415292-31415543)
chr3 (41-150)||(30175418-30175527)
chr3 (41-145)||(22307492-22307596)
chr3 (39-124)||(23413557-23413642)
chr3 (171-334)||(11912930-11913092)
chr3 (39-113)||(45796895-45796969)
chr3 (41-129)||(17519830-17519918)
chr3 (41-129)||(17534692-17534780)
chr3 (41-153)||(41173220-41173332)
chr3 (236-334)||(12269677-12269773)
chr3 (41-150)||(17538146-17538255)
chr3 (41-138)||(17693167-17693264)
chr3 (39-118)||(13516432-13516510)
chr3 (41-118)||(40811850-40811927)
chr3 (41-128)||(5214957-5215044)
chr3 (171-262)||(22307387-22307478)
chr3 (234-312)||(6808209-6808287)
chr3 (65-118)||(17519785-17519838)
chr3 (65-118)||(17534647-17534700)
chr3 (66-150)||(5841846-5841929)
chr3 (186-262)||(40812010-40812086)
chr3 (65-128)||(15932380-15932443)
chr3 (171-262)||(17538264-17538355)
chr3 (171-262)||(30175318-30175409)
chr3 (176-262)||(5841943-5842029)
chr3 (68-113)||(5206544-5206589)
chr3 (63-118)||(52466430-52466486)
chr3 (1-38)||(17681582-17681619)
chr3 (1-38)||(20629014-20629051)
chr3 (1-38)||(24514702-24514739)
chr3 (41-128)||(14507943-14508030)
[»] chr8 (22 HSPs)
chr8 (39-305)||(38550083-38550349)
chr8 (39-262)||(20982759-20982983)
chr8 (57-305)||(27472388-27472636)
chr8 (39-318)||(39833748-39834029)
chr8 (104-334)||(18760476-18760706)
chr8 (122-302)||(1327120-1327300)
chr8 (39-234)||(6102530-6102721)
chr8 (39-334)||(21579887-21580171)
chr8 (41-262)||(39936814-39937023)
chr8 (40-111)||(13428328-13428399)
chr8 (122-334)||(42560208-42560419)
chr8 (39-101)||(1323371-1323433)
chr8 (214-334)||(29763549-29763668)
chr8 (39-118)||(41681007-41681085)
chr8 (39-118)||(29763753-29763831)
chr8 (43-128)||(24713262-24713347)
chr8 (233-334)||(3273211-3273310)
chr8 (196-293)||(32807299-32807396)
chr8 (215-262)||(19139966-19140013)
chr8 (196-302)||(41680834-41680940)
chr8 (57-113)||(21415364-21415421)
chr8 (1-41)||(17450383-17450423)
[»] chr1 (24 HSPs)
chr1 (39-302)||(28194544-28194807)
chr1 (45-262)||(43697143-43697360)
chr1 (39-305)||(46382649-46382913)
chr1 (57-302)||(43542891-43543136)
chr1 (39-168)||(41305825-41305945)
chr1 (57-262)||(35981822-35982027)
chr1 (238-334)||(43697482-43697578)
chr1 (238-334)||(28194365-28194461)
chr1 (121-262)||(20636694-20636835)
chr1 (39-312)||(51274290-51274552)
chr1 (195-332)||(12328538-12328674)
chr1 (41-262)||(48300902-48301111)
chr1 (45-118)||(20634510-20634583)
chr1 (234-321)||(8885469-8885555)
chr1 (171-262)||(41227508-41227599)
chr1 (65-118)||(41227630-41227683)
chr1 (41-138)||(20587769-20587866)
chr1 (41-138)||(20592307-20592404)
chr1 (58-118)||(11809421-11809482)
chr1 (39-76)||(20636668-20636705)
chr1 (58-118)||(23073052-23073113)
chr1 (1-38)||(20943762-20943799)
chr1 (1-38)||(42314335-42314372)
chr1 (1-38)||(43543941-43543978)
[»] scaffold0810 (2 HSPs)
scaffold0810 (39-262)||(2808-3032)
scaffold0810 (266-334)||(3068-3136)
[»] scaffold0009 (1 HSPs)
scaffold0009 (39-302)||(85011-85274)
[»] chr2 (25 HSPs)
chr2 (41-332)||(6576252-6576543)
chr2 (41-262)||(24781644-24781853)
chr2 (43-333)||(24865452-24865730)
chr2 (41-146)||(22689719-22689824)
chr2 (41-146)||(22694315-22694420)
chr2 (39-321)||(22500877-22501147)
chr2 (39-321)||(22508811-22509081)
chr2 (66-300)||(24436108-24436328)
chr2 (237-333)||(7672240-7672335)
chr2 (41-150)||(5032228-5032337)
chr2 (171-262)||(24883610-24883701)
chr2 (41-118)||(24883501-24883578)
chr2 (41-129)||(9974964-9975052)
chr2 (234-334)||(2524410-2524509)
chr2 (47-118)||(9975026-9975097)
chr2 (39-118)||(20915143-20915221)
chr2 (66-167)||(21367910-21368010)
chr2 (171-262)||(5032128-5032219)
chr2 (1-39)||(22106591-22106629)
chr2 (1-39)||(22611684-22611722)
chr2 (1-39)||(23932849-23932887)
chr2 (1-38)||(20320614-20320651)
chr2 (1-38)||(22172656-22172693)
chr2 (1-38)||(23705894-23705931)
chr2 (1-38)||(24672243-24672280)
[»] chr4 (35 HSPs)
chr4 (39-305)||(362018-362275)
chr4 (66-250)||(630910-631095)
chr4 (66-250)||(15868845-15869030)
chr4 (39-262)||(15099112-15099335)
chr4 (121-262)||(13844384-13844526)
chr4 (84-250)||(32851194-32851361)
chr4 (238-334)||(13844648-13844744)
chr4 (39-124)||(15869019-15869104)
chr4 (121-302)||(46642679-46642860)
chr4 (39-123)||(19857345-19857429)
chr4 (39-113)||(32851109-32851183)
chr4 (171-312)||(9923306-9923446)
chr4 (41-334)||(35812171-35812450)
chr4 (234-334)||(46642939-46643038)
chr4 (186-302)||(52873252-52873367)
chr4 (41-150)||(19609363-19609472)
chr4 (41-129)||(10357365-10357453)
chr4 (196-312)||(11479413-11479528)
chr4 (47-153)||(10357285-10357391)
chr4 (196-334)||(33186136-33186273)
chr4 (39-85)||(3514939-3514985)
chr4 (41-123)||(15042058-15042141)
chr4 (41-123)||(15112283-15112366)
chr4 (67-167)||(14185094-14185193)
chr4 (39-118)||(33185990-33186068)
chr4 (197-310)||(15880732-15880845)
chr4 (171-262)||(19609481-19609572)
chr4 (1-39)||(15480498-15480536)
chr4 (1-39)||(15488953-15488991)
chr4 (47-77)||(46642661-46642691)
chr4 (1-38)||(19243944-19243981)
chr4 (1-38)||(19858934-19858971)
chr4 (1-38)||(23802003-23802040)
chr4 (1-38)||(52871168-52871205)
chr4 (1-38)||(55990646-55990683)
[»] chr5 (21 HSPs)
chr5 (57-262)||(29915207-29915413)
chr5 (39-302)||(5889270-5889517)
chr5 (39-262)||(21741667-21741899)
chr5 (238-334)||(5889092-5889188)
chr5 (39-334)||(12122202-12122485)
chr5 (122-334)||(36460130-36460341)
chr5 (39-334)||(21555060-21555344)
chr5 (39-334)||(21557726-21558009)
chr5 (216-321)||(24212422-24212526)
chr5 (45-118)||(31454971-31455043)
chr5 (182-250)||(21871707-21871775)
chr5 (182-250)||(21875987-21876055)
chr5 (214-334)||(30615808-30615926)
chr5 (234-332)||(31455765-31455862)
chr5 (45-118)||(31455584-31455656)
chr5 (39-118)||(17875102-17875180)
chr5 (234-321)||(35852695-35852781)
chr5 (234-332)||(31455152-31455249)
chr5 (63-118)||(30615667-30615722)
chr5 (1-38)||(24474329-24474366)
chr5 (1-38)||(41860242-41860279)
[»] scaffold0004 (1 HSPs)
scaffold0004 (58-302)||(362787-363031)
[»] scaffold1137 (1 HSPs)
scaffold1137 (39-262)||(2426-2649)
[»] scaffold0035 (3 HSPs)
scaffold0035 (39-168)||(106328-106457)
scaffold0035 (1-38)||(107797-107834)
scaffold0035 (1-38)||(116298-116335)
[»] scaffold1792 (2 HSPs)
scaffold1792 (66-248)||(232-414)
scaffold1792 (39-124)||(158-243)
[»] scaffold0230 (4 HSPs)
scaffold0230 (66-248)||(23486-23668)
scaffold0230 (39-124)||(23657-23742)
scaffold0230 (39-80)||(20770-20811)
scaffold0230 (1-38)||(20156-20193)
[»] scaffold0075 (2 HSPs)
scaffold0075 (66-250)||(8430-8616)
scaffold0075 (39-124)||(8605-8690)
[»] scaffold0235 (4 HSPs)
scaffold0235 (66-250)||(13364-13549)
scaffold0235 (66-193)||(25065-25193)
scaffold0235 (39-113)||(13290-13364)
scaffold0235 (39-113)||(24991-25065)
[»] scaffold0124 (1 HSPs)
scaffold0124 (125-250)||(24790-24916)
[»] scaffold0080 (1 HSPs)
scaffold0080 (41-326)||(59295-59566)
[»] scaffold0142 (2 HSPs)
scaffold0142 (125-250)||(7784-7911)
scaffold0142 (1-41)||(17982-18022)
[»] scaffold0045 (1 HSPs)
scaffold0045 (39-150)||(46923-47033)
[»] scaffold0371 (1 HSPs)
scaffold0371 (66-334)||(2980-3234)
[»] scaffold0071 (1 HSPs)
scaffold0071 (39-334)||(14228-14511)
[»] scaffold0061 (3 HSPs)
scaffold0061 (39-134)||(19314-19409)
scaffold0061 (238-321)||(15421-15503)
scaffold0061 (238-321)||(24479-24561)
[»] scaffold0098 (1 HSPs)
scaffold0098 (39-113)||(34877-34951)
[»] scaffold0026 (1 HSPs)
scaffold0026 (39-153)||(145825-145938)
[»] scaffold0737 (4 HSPs)
scaffold0737 (45-334)||(6359-6636)
scaffold0737 (47-128)||(5586-5667)
scaffold0737 (65-129)||(5641-5705)
scaffold0737 (65-128)||(5751-5814)
[»] scaffold0513 (2 HSPs)
scaffold0513 (173-258)||(11007-11092)
scaffold0513 (1-38)||(9299-9336)
[»] scaffold0375 (1 HSPs)
scaffold0375 (41-262)||(9106-9315)
[»] scaffold0599 (2 HSPs)
scaffold0599 (171-334)||(4624-4786)
scaffold0599 (171-334)||(206-368)
[»] scaffold0100 (1 HSPs)
scaffold0100 (183-302)||(36143-36261)
[»] scaffold1351 (1 HSPs)
scaffold1351 (39-333)||(1454-1736)
[»] scaffold0134 (1 HSPs)
scaffold0134 (41-262)||(10030-10239)
[»] scaffold0509 (2 HSPs)
scaffold0509 (41-139)||(9673-9771)
scaffold0509 (186-262)||(9562-9638)
[»] scaffold0434 (1 HSPs)
scaffold0434 (172-302)||(6771-6901)
[»] scaffold0802 (1 HSPs)
scaffold0802 (171-312)||(5459-5599)
[»] scaffold0335 (1 HSPs)
scaffold0335 (171-312)||(814-954)
[»] scaffold0632 (1 HSPs)
scaffold0632 (6-118)||(231-335)
[»] scaffold0384 (1 HSPs)
scaffold0384 (75-262)||(8190-8365)
[»] scaffold0064 (1 HSPs)
scaffold0064 (41-153)||(57839-57951)
[»] scaffold0716 (1 HSPs)
scaffold0716 (39-101)||(4626-4689)
[»] scaffold0507 (1 HSPs)
scaffold0507 (41-118)||(2772-2849)
[»] scaffold0001 (2 HSPs)
scaffold0001 (211-312)||(76939-77038)
scaffold0001 (45-118)||(76794-76867)
[»] scaffold0029 (1 HSPs)
scaffold0029 (64-113)||(74596-74645)
[»] scaffold0639 (1 HSPs)
scaffold0639 (66-123)||(7585-7642)
[»] scaffold0679 (2 HSPs)
scaffold0679 (66-150)||(2581-2664)
scaffold0679 (176-262)||(2481-2567)
[»] scaffold0395 (2 HSPs)
scaffold0395 (39-118)||(10783-10861)
scaffold0395 (214-321)||(10947-11053)
[»] scaffold0261 (1 HSPs)
scaffold0261 (183-250)||(18472-18539)
[»] scaffold0192 (1 HSPs)
scaffold0192 (71-116)||(9803-9848)
[»] scaffold1272 (1 HSPs)
scaffold1272 (1-38)||(1425-1462)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-38)||(777-814)
[»] scaffold0711 (1 HSPs)
scaffold0711 (1-38)||(6413-6450)
[»] scaffold0586 (1 HSPs)
scaffold0586 (57-113)||(1780-1837)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-38)||(21992-22029)
[»] scaffold0191 (1 HSPs)
scaffold0191 (1-38)||(3950-3987)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-38)||(30134-30171)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-38)||(83341-83378)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-38)||(387286-387323)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-41)||(153033-153073)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 57 - 334
Target Start/End: Complemental strand, 37727885 - 37727607
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37727885 aacatcttaacaacttagacatctcatatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacattagcatcttaatgatatt 37727786  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||| |||||    
T  37727785 aatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatctacaac 37727686  T
Q  256 tttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  37727685 tttcacattatatagatcttttcacatttaatcatcaacgtaaagcaacaatattaaatcatcttaatcatcctctctg 37727607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 14270397 - 14270139
Alignment:
Q  39 caatggactcaacatcttaacaa----cttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaa 134  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||  ||||||||||         |||||||||| |    
T  14270397 caatggactcaacatcttaacaattgacttaacaacttagacatctcttatgactccaataatttggatcaacatctta---------caacttaaacca 14270307  T
Q  135 acattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaacc 233  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| ||| |||||||||    
T  14270306 acattagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaacc 14270207  T
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||||||||||||||| ||||||||   |||| || || ||||| ||||||||||| ||||||||    
T  14270206 attacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 14270139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 17232402 - 17232647
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||| |||||||| |||| |||||||||||||||||||||||    
T  17232402 aacatcttaacaacttagacatctcttatgactccaataatttggatcaacaccttacaacttaaacaactcaaaccaacattagcatcttaatgatatt 17232501  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||||||||||| | ||||||||||| |||||||||| |||||||||||| |   ||||||||| ||| |||||||||||| |||||||||||||||| |    
T  17232502 aatacatcacatcagcaaggcaacaccatcaaataatatacagcaagtcaacagcaacaataatcatctaatacaaccattccaacttcatatcaacatc 17232601  T
Q  256 tttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||   |||| || || ||||| ||||||||||| ||||||||    
T  17232602 tttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 17232647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 62 - 305
Target Start/End: Complemental strand, 45847966 - 45847732
Alignment:
Q  62 cttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatac 161  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||         |||||||||| ||||||||||||||||||||||||||||    
T  45847966 cttaacaacttagacatctcttatgactccaataatttggatcaacatctta---------caacttaaaccaacattagcatcttaatgatattaatac 45847876  T
Q  162 atcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttca 260  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  45847875 atcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttca 45847776  T
Q  261 catagtatagatcttttcacatttaatcatcaacgtaaatcaaca 305  Q
    ||   |||| || || ||||| ||||||||||| |||||||||||    
T  45847775 caatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 45847732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 39 - 216
Target Start/End: Complemental strand, 6170460 - 6170283
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||| |||||    
T  6170460 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcatataacttaaacaactt-aaccaacat 6170362  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaat 216  Q
    ||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| | |||||| | ||||||    
T  6170361 tagcaacttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagtaggtcatcatcaacaat 6170283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 8468217 - 8468453
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| |||||||||||||||||||||||||||| |||||||||||  ||||||||||         |||||||||| |||||||||||||||||||||||    
T  8468217 aacatcttaacaacttagacatctcttatgacttcaataatttggatcaacatctta---------caacttaaaccaacattagcatcttaatgatatt 8468307  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||||||||||| | ||||||||||| || |||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  8468308 aatacatcacatcagcaaggcaacaccattaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 8468407  T
Q  256 tttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||   |||| || || ||||| ||||||||||| ||||||||    
T  8468408 tttcacaatatataaatattatcaca-ttaatcatcaaagtaaatca 8468453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 234 - 334
Target Start/End: Original strand, 15439357 - 15439457
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15439357 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 15439456  T
Q  334 g 334  Q
    |    
T  15439457 g 15439457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 9390054 - 9389831
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| ||| |||| |||||||||| ||  ||||    
T  9390054 caatggactcaatatcttaacagcttaacaacttagacatctcttatgactccaataatttggatcaacattttacaacttaaacaacttagacccacat 9389955  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    ||| ||||| ||||||||||||| |||||    ||||||||||| || ||||||| |  ||||||||| | | |||||||||  ||||||||||||||||    
T  9389954 tag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgtagcaagtcaacatcaacaataatcgtcaaatacaaccatta 9389856  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    | ||||||||| | || ||||||||    
T  9389855 cgacttcatataagcatctttcaca 9389831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 18302016 - 18302143
Alignment:
Q  124 aacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattat 222  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||| |||| || | | ||||||||| ||    
T  18302016 aacttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacaacaagccaacatcaacaataatcat 18302115  T
Q  223 caaatacaaccattacaacttcatatca 250  Q
    ||||||||| ||||||||||||||||||    
T  18302116 caaatacaatcattacaacttcatatca 18302143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 30821220 - 30820937
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  30821220 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 30821130  T
Q  139 tagcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
       |||||||||| ||||||| |||||| |  ||||| |||||  ||  ||  || | |||||||| | | | || |||||| |||| ||| ||| ||||    
T  30821129 ---catcttaatggtattaattcatcacaacaacaagacaacatcatttaaacatatgcagcaagttaccatcaataataatcatcatatataacaatta 30821033  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||   |||||||   |||| || |||||||||||||||||||| ||||| || ||||||| |||||||||| ||||||||||||    
T  30821032 caacttcatatcaacgtatttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctctg 30820937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 262
Target Start/End: Original strand, 12371317 - 12371526
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||  ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  12371317 atggactcaatgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagactaacatt 12371415  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  |||   ||||||||||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  12371416 agcatcctaat----------cacgaca--gcaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 12371503  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||| ||||||||    
T  12371504 acttcatatcaacatctttcaca 12371526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 36686214 - 36685934
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  36686214 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 36686124  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
       |||||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  36686123 ---catcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 36686027  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctct 331  Q
     |||||||||||| |  ||||||||   |||| || |||||||||||||||||||| ||||| || ||||||| |||||||||| |||||||||    
T  36686026 aaacttcatatcagcgtctttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctct 36685934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 333
Target Start/End: Original strand, 15213659 - 15213869
Alignment:
Q  122 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataatt 220  Q
    |||||||| || |||||||| ||||| ||||||||||||| |||||    ||||||||||| || ||||||| | |||||||||| | | || ||||||     
T  15213659 acaacttataccaacattag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatc 15213757  T
Q  221 atcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctt 320  Q
    |||| ||| ||| ||||||| ||||||||||   ||||||||   |||| || |||||||||||||||||||| |||||||| || |||| |||||||||    
T  15213758 atcatatataacaattacaatttcatatcaatgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattatt-aatcatctt 15213856  T
Q  321 agtcatcctctct 333  Q
    | |||||||||||    
T  15213857 attcatcctctct 15213869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 11066507 - 11066616
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  11066507 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 11066605  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  11066606 agcatcctaat 11066616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 59405 - 59303
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  59405 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 59307  T
Q  140 agca 143  Q
    ||||    
T  59306 agca 59303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 8852178 - 8852069
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||  ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  8852178 atggactcaatgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 8852080  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  8852079 agcatcctaat 8852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 12128177 - 12128068
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||  || ||||||    
T  12128177 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttcgaccaacatt 12128079  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  12128078 agcatcctaat 12128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 32434602 - 32434499
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  32434602 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 32434504  T
Q  140 agcat 144  Q
    |||||    
T  32434503 agcat 32434499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 11085033 - 11085170
Alignment:
Q  196 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacg 295  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| ||  ||||||||||||||||||| |    
T  11085033 cagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatagtttcacatttaatcatcaaag 11085132  T
Q  296 taaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||||| ||||||| |||||||||| ||||||||||||    
T  11085133 taaatcatcaatatt-aatcatcttattcatcctctctg 11085170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 301
Target Start/End: Original strand, 38480125 - 38480376
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  38480125 caatagactctacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 38480215  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaaca-caatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatt 236  Q
        ||||||||| ||||||| |||||||  | |||| ||||| || | |||| || | |||||||||| | | || |||||| |||| ||| ||| |||    
T  38480216 ---tatcttaatggtattaattcatcacaacagcaagacaacatcatttaaat-atatgcagcaagtcaccatcaataataatcatcatatataacaatt 38480311  T
Q  237 acaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatc 301  Q
    ||||||||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||    
T  38480312 acaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatc 38480376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 334
Target Start/End: Original strand, 11092789 - 11092908
Alignment:
Q  214 aataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaa 313  Q
    |||||| |||| ||| ||| ||||||| |||||||||||| ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| ||    
T  11092789 aataatcatcatatataacaattacaatttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aa 11092887  T
Q  314 tcatcttagtcatcctctctg 334  Q
    |||||||| |||  |||||||    
T  11092888 tcatcttattcacactctctg 11092908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 48811939 - 48812017
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||    
T  48811939 caatggactcaacatctta-cgacttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaact 48812017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 13148367 - 13148276
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  13148367 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcaca 13148276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 46387075 - 46386998
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  46387075 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 46386998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 9320529 - 9320423
Alignment:
Q  214 aataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaa 313  Q
    |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| || ||||||||||||||||||||  ||||||| ||||||| ||    
T  9320529 aataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaaataaatcatcaatatt-aa 9320431  T
Q  314 tcatctta 321  Q
    ||||||||    
T  9320430 tcatctta 9320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 11392113 - 11392030
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 150  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  11392113 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 11392030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 321
Target Start/End: Complemental strand, 11392006 - 11391871
Alignment:
Q  186 aaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttt-tcacattt 284  Q
    ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||| ||| | || ||||||||   |||| ||||||   ||||||    
T  11392006 aaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtacattt 11391907  T
Q  285 aatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    |||||||||  |||||| |||| ||| ||||||||||    
T  11391906 aatcatcaatttaaatccacaacatt-aatcatctta 11391871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 8852060 - 8851969
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||||||| || ||||||| | ||| |||||| | | ||||||||| |||  ||| |||||||||||||| ||||||| | ||||||||    
T  8852060 caaggcaacaccattaaataatatgcagtaagtcaacatcaacaataatcatcccatataaccattacaactttatatcaaaatctttcaca 8851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 11066625 - 11066716
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| ||| || ||||||| | |||||||||| |   |||||| || ||| |||| ||| |||||||||||||||||||| ||||||||    
T  11066625 caaggcagcaccattaaataatatgcagcaagtcaacaacaacaatgatcatccaatataactattacaacttcatatcaacatctttcaca 11066716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 32434443 - 32434396
Alignment:
Q  213 caataattatcaaatacaaccattacaacttcatatcaacaactttca 260  Q
    ||||||| ||| |||| |||||||||||||||||||||||| ||||||    
T  32434443 caataatcatccaatataaccattacaacttcatatcaacatctttca 32434396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5294141 - 5294104
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  5294141 taatcaaataaaacaaataattcaaagagggcgttaca 5294104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5295314 - 5295277
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  5295314 taatcaaataaaacaaataattcaaagagggcgttaca 5295277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5296487 - 5296450
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  5296487 taatcaaataaaacaaataattcaaagagggcgttaca 5296450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8471970 - 8472007
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  8471970 taatcaaataaaacaaataattcaaagagggcgttaca 8472007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17235968 - 17236005
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  17235968 taatcaaataaaacaaataattcaaagagggcgttaca 17236005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 177; Significance: 2e-95; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 44142 - 43879
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  44142 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacat 44043  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  44042 tagcatcttaatgatattaatacatcacatcagcaaggcaacatcatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 43943  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    ||||||||||||| || ||||||||   |||| || || ||||| ||||||||||| ||||||||    
T  43942 caacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 43879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 43796 - 43700
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43796 caactccatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctg 43700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 47716 - 47620
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47716 caactacatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctg 47620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 2e-95; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 25956979 - 25956716
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  25956979 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacat 25956880  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  25956879 tagcatcttaatgatattaatacatcacatcagcaaggcaacatcatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 25956780  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    ||||||||||||| || ||||||||   |||| || || ||||| ||||||||||| ||||||||    
T  25956779 caacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 25956716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 39 - 262
Target Start/End: Original strand, 27850940 - 27851155
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||         |||||||||| |||||    
T  27850940 caattgactcaacatcttaacaacttaacaacttagacatctcgtatgactccaataatttggaccaacatctta---------caacttaaaccaacat 27851030  T
Q  139 tagcatcttaatgatattaatacatcacattac-aaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| |  |||||||||| |||||||||||| |||||||||| | |  |||||||| |||||||||||||| ||    
T  27851031 tagcatcttaatgatattaatacatcacatcagtaaggcaacaccatcaaataatttgcagcaagtcaacatcgacaataatcatcaaatacaaccaata 27851130  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    ||||||||||||| || ||||||||    
T  27851131 caacttcatatcagcatctttcaca 27851155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 113 - 305
Target Start/End: Complemental strand, 31630811 - 31630619
Alignment:
Q  113 ataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatcttta 211  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||| | | |    
T  31630811 ataacttaaacaacttaaaccaacattagcatcttaatgatattaatacatcacatcaacaagacaacaccatcaaataatttacagcaagtcaacatca 31630712  T
Q  212 acaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaaca 305  Q
    |||||||| ||| ||||||||||||| ||||||||||||||| ||||||||   |||| || || ||||| ||||||||||| |||||||||||    
T  31630711 acaataatcatctaatacaaccattataacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 31630619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 89 - 299
Target Start/End: Original strand, 19399684 - 19399895
Alignment:
Q  89 tccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaa 187  Q
    ||||||| |||||  |||||||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||||  | |||||||  || || ||    
T  19399684 tccaatactttggatcaacatcttacaacttaaacaacttagaccaacattagcatcttaatgataataatacatcacaaaagcaaggcagaaccattaa 19399783  T
Q  188 ataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaat 287  Q
    ||||| | |||||||||| | | ||||||||| |||||||| |||||||||||||||||||||||| ||||||||   |||| || ||||||||||||||    
T  19399784 ataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaatattttcacatttaat 19399883  T
Q  288 catcaacgtaaa 299  Q
    |||||| |||||    
T  19399884 catcaaagtaaa 19399895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 25956633 - 25956537
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25956633 caactccatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctg 25956537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 262
Target Start/End: Original strand, 18708539 - 18708748
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  18708539 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 18708637  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  |||   ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  18708638 agcatcctaat----------cacgaca--gcaaggcatcaccattaaataatatgcagcaagtcaacataaacaataatcatccaatataaccattaca 18708725  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||| ||||||||    
T  18708726 acttcatatcaacatctttcaca 18708748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 20734410 - 20734128
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||  | |||||||||||||| ||||| |||||||||||||||||||  |||||||||| |||| || |||||| |            
T  20734410 caatggactcaacatcttatga-cttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttga-------- 20734321  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
       |||||||||| ||||||| |||||||  | |||| |||||| ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  20734320 ---catcttaatggtattaattcatcacaacagcaagacaacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 20734224  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||| |||||||| ||| ||||||||||||    
T  20734223 caatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaata-taaatcattttattcatcctctctg 20734128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 23151279 - 23151070
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||| ||| ||||||||||||||| |||||||||||||||||||  ||||||||||  ||| |||||||||| || ||||||    
T  23151279 atggactcaacgtctta-caacataaacaacttagacatctcatatgactccaataatttggatcaacatcttacgacttaaacaacttagaccaacatt 23151181  T
Q  140 agcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattac 238  Q
    |||||| ||             ||||| ||  ||||||| ||| || ||||||| | |||||||||| | ||||||||||| ||| |||| |||||||||    
T  23151180 agcatccta-------------atcacgatagcaaggcagcaccattaaataatatgcagcaagtcaacattaacaataatcatccaatataaccattac 23151094  T
Q  239 aacttcatatcaacaactttcaca 262  Q
    ||||||||||||||| ||||||||    
T  23151093 aacttcatatcaacatctttcaca 23151070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 312
Target Start/End: Original strand, 18927833 - 18927973
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||   ||||     
T  18927833 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataa 18927932  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  18927933 atc-tttcacatttaatcatcaacttaaatccacaacattaa 18927973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 331
Target Start/End: Complemental strand, 34297149 - 34296953
Alignment:
Q  134 aacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaac 232  Q
    |||||||| ||||| ||||||||||||| |||||    ||||| ||||| || ||||||| | |||||||||| | |||| |||||| |||| ||| |||    
T  34297149 aacattag-atcttcatgatattaatacgtcacaaccgcaaggaaacaccattaaataatatgcagcaagtcaacattaataataatcatcatatataac 34297051  T
Q  233 cattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctct 331  Q
     ||||||| |||||||||||  ||||||||   |||| || ||||||||| |||||||||| |||||||| || |||| |||||||||| |||||||||    
T  34297050 aattacaatttcatatcaacgtctttcacaatatataaatattttcacatctaatcatcaaagtaaatcatcattatt-aatcatcttattcatcctct 34296953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 17319083 - 17318969
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||     
T  17319083 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacata 17318985  T
Q  140 agcatcttaatgatat 155  Q
     ||  |||||||||||    
T  17318984 tgctacttaatgatat 17318969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 334
Target Start/End: Original strand, 27851274 - 27851373
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    ||||||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||||    
T  27851274 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaggtaaatcatcaata-taaatcatcttattcatcctctct 27851372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 27323631 - 27323545
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaact 127  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||  |||||||||| |||| ||||||||    
T  27323631 atggactcaacatctta-caacttaaacaacttagacatctcatatgacgccaataatttggatcaacatcttacaacttaaacaact 27323545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 31733753 - 31733836
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 124  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||    
T  31733753 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaaca 31733836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 22421019 - 22421117
Alignment:
Q  214 aataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| |||||||||    
T  22421019 aataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa 22421117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 2201153 - 2201277
Alignment:
Q  196 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacg 295  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| || |||||| ||||||||||||| |    
T  2201153 cagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcatatttaatcatcaaag 2201252  T
Q  296 taaatcaacaatattaaatcatctta 321  Q
    ||||||| ||||||| ||||||||||    
T  2201253 taaatcatcaatatt-aatcatctta 2201277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 27322298 - 27322222
Alignment:
Q  186 aaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  27322298 aaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 27322222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 28708539 - 28708622
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 150  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  28708539 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 28708622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 31733825 - 31733887
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    |||||||| ||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||    
T  31733825 acaacttaaacatctcatatgactccaataatttggatcaacatcttacaactttaacaactt 31733887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 28708636 - 28708722
Alignment:
Q  176 caacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    |||||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||| ||| | || ||||||||    
T  28708636 caacactattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcaca 28708722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18324162 - 18324199
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  18324162 taataaaataaaacaaataattcaaggagggcgttaca 18324199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 8e-92; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 39 - 325
Target Start/End: Complemental strand, 49390028 - 49389740
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  49390028 caatgaactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacat 49389929  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    || ||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| |||||||| ||| ||||    
T  49389928 taacatcttaatgatattaacacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatcaaatataacaatta 49389829  T
Q  238 caacttcatatcaacaactttcacatagta--tagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtca 325  Q
    |||||||||||||||||| ||||||   ||  || || ||||||||||||||||||||| | || |||||||||||| ||||||||||||    
T  49389828 caacttcatatcaacaac-ttcacaatatatctaaatattttcacatttaatcatcaactttaaacaacaatattaattcatcttagtca 49389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 18440206 - 18439942
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacat-ctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaaca 137  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  18440206 caatggactcaacatcttaacaacttaacaacttagacattctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaaca 18440107  T
Q  138 ttagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatt 236  Q
    ||||||||||||||||||||||||||||| | | |||| |||||| |||||||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  18440106 ttagcatcttaatgatattaatacatcacctcagcaagacaacaccatcaaataatttacagcaggtcatcatcaacaataatcatcaaatacaaccatt 18440007  T
Q  237 acaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||||||||| || ||||||||   ||||||| || ||||| ||||||||||| ||||||||    
T  18440006 acaacttcatatcatcatctttcacaatatatagatattctcaca-ttaatcatcaaagtaaatca 18439942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 57 - 262
Target Start/End: Complemental strand, 20630437 - 20630231
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| |||| |||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  20630437 aacatcttaccaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaacaaacattagcatcttaatgatatt 20630338  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||||||||||| | ||||||||||  ||||||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  20630337 aatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 20630238  T
Q  256 tttcaca 262  Q
    |||||||    
T  20630237 tttcaca 20630231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 39 - 250
Target Start/End: Original strand, 14500897 - 14501109
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||| |||||    
T  14500897 caatggactcaacatcctaaaaacttaacaacttagacatctcttatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacat 14500996  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||| ||||||||| ||||||||||  |||| ||||||| || ||||||| | | ||||||||| ||||||||||  |||||    
T  14500997 tagcatcttaatgatattaatatatcacattagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcatta 14501096  T
Q  238 caacttcatatca 250  Q
    |||||||||||||    
T  14501097 caacttcatatca 14501109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 187 - 334
Target Start/End: Complemental strand, 1989059 - 1988912
Alignment:
Q  187 aataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaa 286  Q
    ||||||| ||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  1989059 aataattcacagcaagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatcaacaactttcacattatatagatcttttcacatttaa 1988960  T
Q  287 tcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  1988959 tcatcaacgtgaatcaacaatattaaatcatcttaatcatcctctctg 1988912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 1465768 - 1465545
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  1465768 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 1465669  T
Q  139 tagcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    ||| ||||| |||||||||||||  ||| |  |||||||||||| || ||||||| | |||||||||| | | |||||||||  |||||| |||||||||    
T  1465668 tag-atcttcatgatattaatacgccacaaccacaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaatccaaccatta 1465570  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    | ||||||||| | || ||||||||    
T  1465569 cgacttcatataagcatctttcaca 1465545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 49970178 - 49969964
Alignment:
Q  89 tccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaa 187  Q
    ||||||| |||||  |||||||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||||  | |||||||  || || ||    
T  49970178 tccaatactttggatcaacatcttacaacttaaacaacttagaccaacattagcatcttaatgataataatacatcacaacagcaaggcagtaccattaa 49970079  T
Q  188 ataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaat 287  Q
    ||||| | |||||||||| | | ||||||||| |||||||| |||||||||||||||||||||||| ||||||||   |||| || ||||||||||||||    
T  49970078 ataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaatattttcacatttaat 49969979  T
Q  288 catcaacgtaaatca 302  Q
    |||||| ||||||||    
T  49969978 catcaaagtaaatca 49969964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 12269351 - 12269596
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| |||||||||||||||||||| |||||||||||||||||||  ||||| |||| |||| |||||||||| || |||||||||| ||||||||||||    
T  12269351 aacatcttaacaacttagacatctcatatgactccaataatttggatcaacaccttacaacttaaacaacttatactaacattagcaccttaatgatatt 12269450  T
Q  157 aatacatcac-attacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||| | ||| | | ||||||||||| || || |||| | ||||| |||| | | ||||||||| |||||||| || ||||||||||||||||||||  |    
T  12269451 aatagaccacgactgcaaggcaacactattaactaatatgcagcacgtcaacatcaacaataatcatcaaatataatcattacaacttcatatcaacgtc 12269550  T
Q  256 tttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
     |||| |   |||| ||||| ||||| |||||||||||| |||||||    
T  12269551 cttcaaaatttataaatcttctcaca-ttaatcatcaacttaaatca 12269596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 45796969 - 45797153
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  45796969 acaaattaaacatctcatatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatca 45797068  T
Q  166 catta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    ||| | ||||||||||  |||| |||| || || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  45797069 catcagcaaggcaacaacatcatataa-ttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 45797153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 250
Target Start/End: Complemental strand, 23413568 - 23413385
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||| |||||||  ||||||||||||||||||||| ||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||    
T  23413568 acaacttaaacatctcaaatgactccaataatttgggccgacatcttataactcaaatgacttaaac-aacattagcatcttaatgatattaatacatca 23413470  T
Q  166 catta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    ||| | |||| |||||  ||| |||||||  || ||||||| | | |||| |||| ||||||||||| ||||||||||||||||||    
T  23413469 catcagcaagacaacaacatc-aataattcgcaacaagtcaacgtcaacagtaatcatcaaatacaatcattacaacttcatatca 23413385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 31224918 - 31224635
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || |||||||||||         
T  31224918 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttaaaca----- 31224826  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  31224825 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 31224731  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||  |||||||||  |||| || |||||||||||||||||||| ||||| || ||||||| |||||||||| ||||||||||||    
T  31224730 caacttcatatcaacgtctttcacattatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctctg 31224635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 12852631 - 12852504
Alignment:
Q  125 acttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatc 223  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||| | | ||||||||| |||    
T  12852631 acttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatc 12852532  T
Q  224 aaatacaaccattac-aacttcatatca 250  Q
    |||||||| |||||| ||||||||||||    
T  12852531 aaatacaatcattacaaacttcatatca 12852504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 262
Target Start/End: Original strand, 40807035 - 40807244
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  40807035 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 40807133  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  |||   ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  40807134 agcatcctaat----------cacgaca--gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 40807221  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||| ||||||||    
T  40807222 acttcatatcaacatctttcaca 40807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 15447961 - 15447681
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  15447961 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaatatcttacaacttaa-caacttagaca----- 15447869  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | || ||||||| | |   ||||||| |||| ||| ||| ||||    
T  15447868 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccat---caataataatcatatataacaatta 15447777  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||  |||||||||  |||  || |||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  15447776 caacttcatatcaacgtctttcacattatatgaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctctg 15447681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 301
Target Start/End: Original strand, 31415292 - 31415543
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  31415292 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 31415382  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
       |||||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  31415383 ---catcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 31415479  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatc 301  Q
    |||||||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||    
T  31415480 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatc 31415543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 30175527 - 30175418
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    |||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  30175527 atggactcaaaatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 30175429  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  30175428 agcatcctaat 30175418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 22307596 - 22307492
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  22307596 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 22307498  T
Q  140 agcatc 145  Q
    ||||||    
T  22307497 agcatc 22307492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 23413642 - 23413557
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 124  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||| |||||    
T  23413642 caatggactcaacatcctagcaacttaacaacttagacatctcttatgactccaataatttggatcaacatcatacaacttaaaca 23413557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 334
Target Start/End: Original strand, 11912930 - 11913092
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||||||| || ||||||| | || ||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   ||||     
T  11912930 caaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 11913029  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    || |||||||||||||||||||| |||||||| || |||| |||||||||| ||||||||||||    
T  11913030 atattttcacatttaatcatcaaagtaaatcatcattatt-aatcatcttattcatcctctctg 11913092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 45796895 - 45796969
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  45796895 caatggacttaacatcctaacaactaaacaacttagacatctcttatgactccaataatttggatcaacatctta 45796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 17519918 - 17519830
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 129  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  17519918 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttataacttaaacaactta 17519830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 17534780 - 17534692
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 129  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  17534780 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttataacttaaacaactta 17534692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 41173332 - 41173220
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||     
T  41173332 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacata 41173234  T
Q  140 agcatcttaatgat 153  Q
     ||| |||||||||    
T  41173233 tgcaacttaatgat 41173220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 12269677 - 12269773
Alignment:
Q  236 tacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||||||||||||||   |||| |||||||  || |||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  12269677 tacaacttcatatcaacaactttcacaatatataaatctttt-tca-ttaatcatcaactttaaacaacaatattaaatcatcttagtcatcctctctg 12269773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 17538146 - 17538255
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||  |||| |||||||||| || ||||||    
T  17538146 atggagtcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatctttcaacttaaacaacttagaccaacatt 17538244  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  17538245 agcatcctaat 17538255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 17693167 - 17693264
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||| |||| |||||||| ||||||||||||||| |||||||||||||||||||   ||||||||| |||| |||||||||| || |||||    
T  17693167 atggactcaacaactta-caacttaaacaacttagacatctcatatgactccaataatttggattaacatcttacaacttaaacaacttagaccaacat 17693264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 13516432 - 13516510
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||  ||| |||||| ||||    
T  13516432 caatggactcaacatctta-cgacttaacaacttggacatctcatatgactccaataatttggatcaaaatcttacaact 13516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 40811850 - 40811927
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  40811850 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 40811927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 5214957 - 5215044
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    |||||||||||  |||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||    
T  5214957 atggactcaacgactta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaactttaacaactt 5215044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 22307478 - 22307387
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| || ||||||||||||||||||||| ||||||||    
T  22307478 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataatcattacaacttcatatcaacatctttcaca 22307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 6808209 - 6808287
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    ||||||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| |||||||||    
T  6808209 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa 6808287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 17519838 - 17519785
Alignment:
Q  65 aacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  17519838 aacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 17519785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 17534700 - 17534647
Alignment:
Q  65 aacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  17534700 aacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 17534647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 5841846 - 5841929
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 150  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  5841846 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 5841929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 40812010 - 40812086
Alignment:
Q  186 aaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| | |||||||||| | | ||||||||| |||  ||| |||||||||||||||||||||||| ||||||||    
T  40812010 aaataatatgcagcaagtcaacatcaacaataatcatcccatataaccattacaacttcatatcaacatctttcaca 40812086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 15932443 - 15932380
Alignment:
Q  65 aacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    ||||||||| ||||||| |||||||||||||||||||  |||||||||| || | |||||||||    
T  15932443 aacaacttaaacatctcatatgactccaataatttggatcaacatcttacaatttaaacaactt 15932380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 17538264 - 17538355
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| || || |||||||||||||||||| ||||||||    
T  17538264 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataatcaatacaacttcatatcaacatctttcaca 17538355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 30175409 - 30175318
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||||||| || ||||||| |  ||||||||| | | ||||||||| |||  ||| | |||||||||||||||||||||| ||||||||    
T  30175409 caaggcaacaccattaaataatatgaagcaagtcaacatcaacaataatcatcccatatatccattacaacttcatatcaacatctttcaca 30175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 5841943 - 5842029
Alignment:
Q  176 caacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    |||||| || ||||||| | |||||||||| | | ||||||||| |||||||| ||||||||||||||| ||| | || ||||||||    
T  5841943 caacactattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcttatgagcatctttcaca 5842029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 5206589 - 5206544
Alignment:
Q  68 aacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||    
T  5206589 aacttagacatctcatatgactccaataatttggatcaacatctta 5206544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 52466486 - 52466430
Alignment:
Q  63 ttaacaactta-gacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| |||||||| |||||||||||||||||||  |||||||||| ||||    
T  52466486 ttaacaacttaagacatctcatatgactccaataatttggatcaacatcttacaact 52466430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17681582 - 17681619
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  17681582 taatcaaataaaacaaataattcaaagagggcgttaca 17681619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20629051 - 20629014
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  20629051 taatcaaataaaacaaataattcaaagagggcgttaca 20629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24514702 - 24514739
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  24514702 taatcaaataaaacaaataattcaaagagggcgttaca 24514739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 14507943 - 14508030
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    ||||||||||| ||||| |||||||| ||||||| | ||||  ||||||||||||||||||   |||||||||| ||||  ||||||||    
T  14507943 atggactcaacgtctta-caacttaaacaacttaaatatcttatatgactccaataatttgattcaacatcttacaactttaacaactt 14508030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 5e-90; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 39 - 305
Target Start/End: Complemental strand, 38550349 - 38550083
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||    
T  38550349 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaaccaacat 38550250  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||| | | ||||||||| ||| |||||||||||||    
T  38550249 tagcatcttaatgatattaatacatcacatcagcaagacaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccatta 38550150  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaaca 305  Q
    |||||||||||||||| ||||||||   |||| || || ||||| ||||||||||| |||||||||||    
T  38550149 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 38550083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 20982983 - 20982759
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  20982983 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaatttaaacaaacat 20982884  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    || ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||| | | ||||||||| ||| |||||||||||||    
T  20982883 taacatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaaatcaacatcaacaataatcatctaatacaaccatta 20982784  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    |||||||||||||| | ||||||||    
T  20982783 caacttcatatcaatatctttcaca 20982759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 57 - 305
Target Start/End: Complemental strand, 27472636 - 27472388
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  27472636 aacatcttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaaccaacattagcatcttaatgatatt 27472537  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  27472536 aatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 27472437  T
Q  256 tttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaaca 305  Q
    |||||||   |||| || || ||||| ||||||||||| |||||||||||    
T  27472436 tttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 27472388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 39 - 318
Target Start/End: Original strand, 39833748 - 39834029
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||| |  |||||    
T  39833748 caatggactcaacatcttaacaactcaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagatcaacat 39833847  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaa-cacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaacca-t 235  Q
    ||| ||||| |||||||||||||||||||| | |||||||| ||  ||  ||  || |||||| ||| | | | || ||||||  ||| ||| ||||| |    
T  39833848 tag-atcttcatgatattaatacatcacatcagcaaggcaatcatcatttaaacatatacagcgagtaaccatcaataataatcttcatatataaccatt 39833946  T
Q  236 tacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatc 318  Q
    | |||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39833947 tgcaacttcatatcaacaacattcacgttatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatc 39834029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 104 - 334
Target Start/End: Original strand, 18760476 - 18760706
Alignment:
Q  104 caacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaag 202  Q
    |||| ||||| |||| |||||||||| || |||||||||||||||||||||||||||||||||| || ||||||| ||| || ||||||| | |||||||    
T  18760476 caacgtcttacaacttaaacaacttagaccaacattagcatcttaatgatattaatacatcacaatagcaaggcatcaccattaaataatatgcagcaag 18760575  T
Q  203 tcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    ||| | | ||||||||| |||||||| |||||||| ||||||||||||||| ||||||||   |||| ||||||||||||||||||||| || |||| |     
T  18760576 tcaacatcaacaataatcatcaaatataaccattataacttcatatcaacatctttcacaatatataaatcttttcacatttaatcatctacttaaaccc 18760675  T
Q  303 acaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||| |||||||||| |||| |||||||    
T  18760676 acaatatt-aatcatcttattcatactctctg 18760706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 302
Target Start/End: Complemental strand, 1327300 - 1327120
Alignment:
Q  122 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataatt 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | | |||||||||     
T  1327300 acaacttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatc 1327201  T
Q  221 atcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    ||| ||||||||||||||||||||||||||||| | ||||||   |||| || || ||||| ||||||||||| ||||||||    
T  1327200 atctaatacaaccattacaacttcatatcaacatcgttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 1327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 234
Target Start/End: Complemental strand, 6102721 - 6102530
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | |||||| ||||    |||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  6102721 caatggactcaacatctta-cgacttaagaact----catctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 6102627  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaacca 234  Q
    |||||||||||||||||||||||||||||  | ||||||||||| || ||||||| |  ||||||||| | | ||||| ||| |||||||| |||||    
T  6102626 tagcatcttaatgatattaatacatcacaacagcaaggcaacaccattaaataatatggagcaagtcaacatcaacaacaatcatcaaatataacca 6102530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 21580171 - 21579887
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  21580171 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 21580079  T
Q  139 tagcatcttaa-tgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatt 236  Q
         |||||| || ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || ||||||||||| ||| ||| |||    
T  21580078 -----tcttaaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataattatcatatataacaatt 21579984  T
Q  237 acaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||||||||||||||  ||||||||   |||| || |||||||||||||||||||| ||||||||  |||||| |||||||||| ||||||||||||    
T  21579983 acaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattaatatt-aatcatcttattcatcctctctg 21579887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 39937023 - 39936814
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||  ||| |||||||||| || ||||||    
T  39937023 atggactcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacgacttaaacaacttagaccaacatt 39936925  T
Q  140 agcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattac 238  Q
    |||||| ||             ||||| ||  ||||||| ||| || ||||||| | |||||||||| | ||||||||||| ||| |||| |||||||||    
T  39936924 agcatccta-------------atcacgatagcaaggcagcaccattaaataatatgcagcaagtcaacattaacaataatcatccaatataaccattac 39936838  T
Q  239 aacttcatatcaacaactttcaca 262  Q
    ||||||||||||||| ||||||||    
T  39936837 aacttcatatcaacatctttcaca 39936814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 13428399 - 13428328
Alignment:
Q  40 aatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatct 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  13428399 aatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatct 13428328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 334
Target Start/End: Complemental strand, 42560419 - 42560208
Alignment:
Q  122 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataatt 220  Q
    |||||||| || |||||||| ||||| ||||||||||||| |||||    ||||| ||||| || ||||||| | |||||||||| | | || ||||||     
T  42560419 acaacttataccaacattag-atcttcatgatattaatacgtcacaaccgcaaggtaacaccattaaataatatgcagcaagtcaacatcaataataatc 42560321  T
Q  221 atcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctt 320  Q
    |||| ||| ||| ||||||| |||||||||||   |||||||   |||| || |||||||||||||||||||| |||||||| || |||| |||||||||    
T  42560320 atcatatataacaattacaatttcatatcaacgtatttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattatt-aatcatctt 42560222  T
Q  321 agtcatcctctctg 334  Q
    | ||||||||||||    
T  42560221 attcatcctctctg 42560208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 1323433 - 1323371
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgg 101  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1323433 caatgtacttaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgg 1323371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 334
Target Start/End: Complemental strand, 29763668 - 29763549
Alignment:
Q  214 aataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaa 313  Q
    |||||| |||| ||| ||| |||||||||||||||||||  ||||||||   |||| || |||||||||||||||||||| ||||||||  |||||| ||    
T  29763668 aataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattaatatt-aa 29763570  T
Q  314 tcatcttagtcatcctctctg 334  Q
    |||||||| ||||||||||||    
T  29763569 tcatcttattcatcctctctg 29763549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 41681085 - 41681007
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||    
T  41681085 caatggactcaacatctta-cgacttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaact 41681007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 29763831 - 29763753
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| | ||||||||||||| ||||||| ||||||| |||||||||||  |||||||||| ||||    
T  29763831 caatggactcaacatctta-cgacttaacaacttaaacatctcatatgacttcaataatttggatcaacatcttacaact 29763753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 24713262 - 24713347
Alignment:
Q  43 ggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    ||||||||| ||||| |||||||| || |||||||||||| ||||||| |||||||||||  |||||||||| |||| |||||||||    
T  24713262 ggactcaacgtctta-caacttaaacagcttagacatctcatatgacttcaataatttggatcaacatcttacaacttaaacaactt 24713347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 3273211 - 3273310
Alignment:
Q  233 cattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctc 332  Q
    ||||||||||||||| |||||  |||||||   |||| |||||| ||||||||||||||||| |||||| | || ||| |||||||||| |||| |||||    
T  3273211 cattacaacttcataccaacatttttcacaatatataaatcttt-cacatttaatcatcaacttaaatccataacatt-aatcatcttattcatactctc 3273308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 32807299 - 32807396
Alignment:
Q  196 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaa 293  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| || ||||||||||||||||||||    
T  32807299 cagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 32807396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 19139966 - 19140013
Alignment:
Q  215 ataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  19139966 ataatcatccaatataaccattacaacttcatatcaacatctttcaca 19140013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 302
Target Start/End: Complemental strand, 41680940 - 41680834
Alignment:
Q  196 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacg 295  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| || ||||||| | ||||||||   |||| || ||||||||||||||||||||      
T  41680940 cagcaagtcaccatcaataataatcatcatatataacaattacaatttgatatcaatatctttcacaatatataaatattttcacatttaatcatcaata 41680841  T
Q  296 taaatca 302  Q
    |||||||    
T  41680840 taaatca 41680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 21415421 - 21415364
Alignment:
Q  57 aacaacttaacaacttagacatctctt-atgactccaataatttgggccaacatctta 113  Q
    |||| |||||| ||||||||||||||| ||||||||||||| ||||  ||||||||||    
T  21415421 aacatcttaacgacttagacatctctttatgactccaataacttggatcaacatctta 21415364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17450423 - 17450383
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacacaa 41  Q
    ||||||||||||||||||||||||  |||| ||||||||||    
T  17450423 taatcaaataaaacaaataattcaaagaggacgttacacaa 17450383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 3e-88; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 28194807 - 28194544
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||    
T  28194807 caatggactcaacatctaaacaacttaacaacttagacatctcttatgactccaataatttagaccaacatcttataacttaaacaacttaaaccaacat 28194708  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||||| || ||| | ||||||||| |||||||||||||||||    
T  28194707 tagcatcttaatgatattaatacatcacctcagcaaggcaacaccatcaaataatttacagcaggttatcatcaacaataatcatcaaatacaaccatta 28194608  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||||||||||| ||||||||   |||| || || ||||| ||||||||||| ||||||||    
T  28194607 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 28194544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 45 - 262
Target Start/End: Original strand, 43697143 - 43697360
Alignment:
Q  45 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcat 144  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||    
T  43697143 actcaacatcttaacaacttaaaaacttagacatcacttatgactccaataatttggaccaacatcttataacttaaacaactt-aaccaacattagcat 43697241  T
Q  145 cttaatgatattaatacatcacat-tacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaactt 243  Q
    ||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  43697242 cttaatgatattaatacatcacatcaacaaggtaacaccatcaaataatttacagcaagtcatcatcaacaataatcatcaaataaaaccattacaactt 43697341  T
Q  244 catatcaacaactttcaca 262  Q
    ||||||| || ||||||||    
T  43697342 catatcagcatctttcaca 43697360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 39 - 305
Target Start/End: Complemental strand, 46382913 - 46382649
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||| ||||||||| |||||    
T  46382913 caatagactcaatatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaaaacttaaaccaacat 46382814  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    ||||||||||||||||||||||||| |||| | || |||||||| ||||||||||||||||||||||| | | ||||||||| ||| |||| ||||||||    
T  46382813 tagcatcttaatgatattaatacattacatcagcatggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaataaaaccatta 46382714  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaaca 305  Q
    |||||||||||||||| |||||||  | |||| || || ||||| ||||||||||| |||||||||||    
T  46382713 caacttcatatcaacatctttcac--aatataaatattctcaca-ttaatcatcaaagtaaatcaaca 46382649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 57 - 302
Target Start/End: Original strand, 43542891 - 43543136
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  43542891 aacatcttaacaacttagacatctcttatgactccaataatttggttcaacatcttacaacttaaacaacttaaaccaacattagcatcttaatgatatt 43542990  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    ||||||| |||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| ||| ||||||| ||||||||||||||||||||| |    
T  43542991 aatacatgacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaatcattacaacttcatatcaacatc 43543090  T
Q  256 tttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||   |||| || || ||||| ||||||||||| ||||||||    
T  43543091 tttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 43543136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 41305945 - 41305825
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||         ||||||||||| |||||    
T  41305945 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctt---------acaacttaaaccaacat 41305855  T
Q  139 tagcatcttaatgatattaatacatcacat 168  Q
    ||||||||||||||||||||||||||||||    
T  41305854 tagcatcttaatgatattaatacatcacat 41305825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 57 - 262
Target Start/End: Complemental strand, 35982027 - 35981822
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||| |||||||||| || |||||||| ||||| ||||||||    
T  35982027 aacatcttaacaacttaggcatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacattag-atcttcatgatatt 35981929  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    ||||| |||||    ||||||||||| || ||||||| | || ||||||| | | |||||||||  ||||||||||||||||| ||||||||| | || |    
T  35981928 aatacgtcacaaccgcaaggcaacaccattaaataatatgcaacaagtcaacatcaacaataatcgtcaaatacaaccattacgacttcatataagcatc 35981829  T
Q  256 tttcaca 262  Q
    |||||||    
T  35981828 tttcaca 35981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 43697482 - 43697578
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| |||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  43697482 caactccatatcaacaactttcacactatatagatcttttcacatttaatcatcaacttaaatcaacaatattaaatcatcttaatcatcctctctg 43697578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 28194461 - 28194365
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  28194461 caactacatatcaacaactttcacattatatagattttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcctaatcatcttctctg 28194365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 262
Target Start/End: Original strand, 20636694 - 20636835
Alignment:
Q  121 aacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataat 219  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||  | || |||||||| || ||||||| | |||||||||| | | |||||||||    
T  20636694 aacaacttagaccaacattag-atcttcatgatattaatacatcacaacaacagggcaacaccattaaataatatgcagcaagtcaacatcaacaataat 20636792  T
Q  220 tatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
      ||||||||||||||||| ||||||||| |||| ||||||||    
T  20636793 cgtcaaatacaaccattacgacttcatataaacatctttcaca 20636835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 51274552 - 51274290
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  51274552 caatagactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 51274462  T
Q  139 tagcatcttaatgatattaatacatcacattacaaggcaacacaatca---aataatttacagcaagtcatctttaacaataattatcaaatacaaccat 235  Q
       |||||||||| ||||||| |||||||  ||||   |||| || ||   ||  || | || ||||||| | | || |||||| |||  ||| ||| ||    
T  51274461 ---catcttaatggtattaattcatcaca--acaacaaaacaaaaacatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaat 51274367  T
Q  236 tacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    |||||||||||||||||| ||||||||   |||| || |||||||||||||||||||| |||||||| |||||||||    
T  51274366 tacaacttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa 51274290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 332
Target Start/End: Complemental strand, 12328674 - 12328538
Alignment:
Q  195 acagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaac 294  Q
    ||||||||||| | | || |||||| |||| ||| ||| |||||| ||||||||||||  ||||||||   |||| || |||||| |||||||||||||     
T  12328674 acagcaagtcaccatcaataataatcatcatatataacaattacatcttcatatcaacgtctttcacaatatataaatattttcaaatttaatcatcaaa 12328575  T
Q  295 gtaaatcaacaatattaaatcatcttagtcatcctctc 332  Q
    |||||||| ||||||| |||||||||| ||||||||||    
T  12328574 gtaaatcatcaatatt-aatcatcttattcatcctctc 12328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 262
Target Start/End: Original strand, 48300902 - 48301111
Alignment:
Q  41 atggactcaacatcttaacaacttaacaa-cttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    |||||||||| |||||| |||||||| || |||| ||| ||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  48300902 atggactcaaaatctta-caacttaaaaaacttaaacaactcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 48301000  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    | |||| ||||          ||  |||  ||||| |||||| || ||||||| | |||||||||| | | ||||||||| |||  ||  ||||||||||    
T  48301001 aacatcctaat----------cacgaca--acaagacaacaccattaaataatatgcagcaagtcaacatcaacaataataatctcatgtaaccattaca 48301088  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||| ||||||||    
T  48301089 acttcatatcaacatctttcaca 48301111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 20634583 - 20634510
Alignment:
Q  45 actcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  20634583 actcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 20634510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 8885469 - 8885555
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    ||||||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  8885469 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatctta 8885555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 41227599 - 41227508
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| |||||| ||||| | | |||||||||| | ||||||||||| ||| |||| |||||||| |||||||||| |||| ||||||||    
T  41227599 caaggcagcacaattaaatattatgcagcaagtcaacattaacaataatcatccaatataaccattaaaacttcatataaacatctttcaca 41227508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 41227683 - 41227630
Alignment:
Q  65 aacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  41227683 aacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 41227630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 20587769 - 20587866
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||| ||||| |||||||| |||||||||||| |  ||||||||| |||||||||  |||||||||| | || |||||||||| || |||||    
T  20587769 atggactcaacgtctta-caacttaaacaacttagacatttaatatgactcctataatttggatcaacatcttacagcttaaacaacttagaccaacat 20587866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 20592307 - 20592404
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||| ||||| |||||||| |||||||||||| |  ||||||||| |||||||||  |||||||||| | || |||||||||| || |||||    
T  20592307 atggactcaacgtctta-caacttaaacaacttagacatttaatatgactcctataatttggatcaacatcttacagcttaaacaacttagaccaacat 20592404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 11809482 - 11809421
Alignment:
Q  58 acaactta-acaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||  |||||||||| ||||    
T  11809482 acaacttagacaacttacacatctcatatgactccaataatttggatcaacatcttacaact 11809421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 20636668 - 20636705
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagac 76  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20636668 caatggactcaacatcttaacgacttaacaacttagac 20636705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 23073052 - 23073113
Alignment:
Q  58 acaactta-acaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||  |||||||||| ||||    
T  23073052 acaacttagacaacttaaacatctcatatgactccaataatttggatcaacatcttagaact 23073113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20943799 - 20943762
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  20943799 taatcaaataaaacaaataattcaaagagggcgttaca 20943762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42314372 - 42314335
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  42314372 taatcaaataaaacaaataattcaaagagggcgttaca 42314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43543941 - 43543978
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  43543941 taatcaaataaaacaaataattcaaagagggcgttaca 43543978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 161; Significance: 8e-86; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 39 - 262
Target Start/End: Original strand, 2808 - 3032
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||| |||||    
T  2808 caatgcactcaacatcttaaaaacttaacaacttagacatctcttatgactccaataatttagaccaacatcttataacttaaaaaacttaaaccaacat 2907  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  2908 tagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcatataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 3007  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    |||||||||||||||| ||||||||    
T  3008 caacttcatatcaacatctttcaca 3032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 3068 - 3136
Alignment:
Q  266 tatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3068 tatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctg 3136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 39 - 302
Target Start/End: Original strand, 85011 - 85274
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||    
T  85011 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttaaaacttaaacaacttaaaccaacat 85110  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||| |||||||||||||||||||| || | ||||||||||| ||||| |||||| |||||||||| | | ||||||||| |||||||||||| ||||    
T  85111 tagcatattaatgatattaatacatcaaatcagcaaggcaacaccatcaattaatttgcagcaagtcaacatcaacaataatcatcaaatacaactatta 85210  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||||||||||||||| ||||||||   |||| || || ||||| ||||||||||| ||||||||    
T  85211 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 85274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 41 - 332
Target Start/End: Original strand, 6576252 - 6576543
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  6576252 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 6576350  T
Q  140 agcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattac 238  Q
    |||||||||||||||||| ||||||||| || ||||||| ||| || ||||||| | |||||||||| | | ||||||||| |||||||| |||||||||    
T  6576351 agcatcttaatgatattattacatcacaatagcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattac 6576450  T
Q  239 aacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctc 332  Q
    ||||||||||||||| ||||||||   |||| || ||||||| ||||||||||||| |||||| |||| ||| |||||||||| |||| |||||    
T  6576451 aacttcatatcaacatctttcacaatatataaattttttcacttttaatcatcaacttaaatccacaacatt-aatcatcttattcatactctc 6576543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 24781853 - 24781644
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  24781853 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 24781755  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  ||||  ||||||| ||  || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  24781754 agcatcctaat----------cacgacat--caaggcagcatcattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 24781667  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||||||||||||    
T  24781666 acttcatatcaacaactttcaca 24781644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 333
Target Start/End: Complemental strand, 24865730 - 24865452
Alignment:
Q  43 ggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagc 142  Q
    |||||| |||||||| | ||||||||||||||||||||| ||| |||||||||||||||  |||||||||| |||| || ||||||| |||             
T  24865730 ggactcgacatctta-cgacttaacaacttagacatctcatataactccaataatttggatcaacatcttacaacttaa-caacttagaca--------- 24865642  T
Q  143 atcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaac 241  Q
     |||||||| ||||||| ||||||| || |||| |||||  ||  ||  || | || ||||||| | | || |||||| |||  ||| ||| ||||||||    
T  24865641 -tcttaatggtattaattcatcacaatagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaac 24865543  T
Q  242 ttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    |||||||||||| ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||    
T  24865542 ttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctct 24865452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 22689719 - 22689824
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  22689719 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 22689817  T
Q  140 agcatct 146  Q
    |||||||    
T  22689818 agcatct 22689824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 22694315 - 22694420
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  22694315 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 22694413  T
Q  140 agcatct 146  Q
    |||||||    
T  22694414 agcatct 22694420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 321
Target Start/End: Original strand, 22500877 - 22501147
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  22500877 caatagactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaatatcttacaacttaa-caacttagaca----- 22500969  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| ||||||| || |||| || ||  ||  ||  || | |||||||| | | | || | |||| |||  ||| ||| ||||    
T  22500970 -----tcttaatggtattaattcatcacaatagcaagacagcatcatttaaacatatgcagcaagttaccatcaatattaatcatcttatataacaatta 22501064  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    |||||||||||||||  |||||||||  |||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  22501065 caacttcatatcaacgtctttcacattatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatctta 22501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 321
Target Start/End: Original strand, 22508811 - 22509081
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  22508811 caatagactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaatatcttacaacttaa-caacttagaca----- 22508903  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| ||||||| || |||| || ||  ||  ||  || | |||||||| | | | || | |||| |||  ||| ||| ||||    
T  22508904 -----tcttaatggtattaattcatcacaatagcaagacagcatcatttaaacatatgcagcaagttaccatcaatattaatcatcttatataacaatta 22508998  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    |||||||||||||||  |||||||||  |||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  22508999 caacttcatatcaacgtctttcacattatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatctta 22509081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 300
Target Start/End: Original strand, 24436108 - 24436328
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||||||||| ||||        |||  ||    
T  24436108 acaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacattagcatcctaat--------tacgaca 24436199  T
Q  166 cattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatag 265  Q
         ||||||| ||| || ||||||| | |||||||||| | | ||||| ||| ||| |||  ||||||||||| |||||||||||| ||||||||       
T  24436200 g----caaggcagcaccattaaataatatgcagcaagtcaacatcaacaa-aatcatccaatgtaaccattacaatttcatatcaacatctttcacaata 24436294  T
Q  266 tatagatcttttcacatttaatcatcaacgtaaat 300  Q
    |||| ||| |||||||||||||||||||| |||||    
T  24436295 tataaatc-tttcacatttaatcatcaacttaaat 24436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 7672335 - 7672240
Alignment:
Q  237 acaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    ||||||||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||    
T  7672335 acaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctct 7672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 5032337 - 5032228
Alignment:
Q  41 atggactcaacatcttaacaacttaac-aacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| ||||||||  |||||| ||| ||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  5032337 atggactcaacgtctta-caacttaaataacttaaacacctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 5032239  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  5032238 agcatcctaat 5032228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 24883610 - 24883701
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  24883610 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 24883701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 24883501 - 24883578
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  24883501 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 24883578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 9974964 - 9975052
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 129  Q
    ||||||||||| ||||| |||||||| ||||||||||||||  ||||||| |||||||||||  |||||||||| |||| ||||||||||    
T  9974964 atggactcaacgtctta-caacttaaacaacttagacatcttatatgacttcaataatttggatcaacatcttacaacttaaacaactta 9975052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 334
Target Start/End: Complemental strand, 2524509 - 2524410
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    ||||||| || ||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| |||||||||| |||| ||||||    
T  2524509 attacaatttgatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatactctct 2524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 9975026 - 9975097
Alignment:
Q  47 tcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  9975026 tcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 9975097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 20915143 - 20915221
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |  |||||||||| ||||    
T  20915143 caatggattcaacatctta-cgacttaacaacttagacatctcatatgactccaatactttagaacaacatcttacaact 20915221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 21367910 - 21368010
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||||||| ||| |||||||||||||||||||  |||||||||| ||||   ||  |||| || ||| || |||||||||||||||||||| ||||    
T  21367910 acaacttagacaactcatatgactccaataatttggaacaacatcttacaact-ttacttcttagaccaacgtttgcatcttaatgatattaataaatca 21368008  T
Q  166 ca 167  Q
    ||    
T  21368009 ca 21368010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 5032219 - 5032128
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||||||  || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||| |||||||||||||||  |||||||    
T  5032219 caaggcaacaacattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattataacttcatatcaacatttttcaca 5032128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22106591 - 22106629
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacac 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  22106591 taatcaaataaaacaaataattcaaagagggcgttacac 22106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22611722 - 22611684
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacac 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  22611722 taatcaaataaaacaaataattcaaagagggcgttacac 22611684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23932849 - 23932887
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacac 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  23932849 taatcaaataaaacaaataattcaaagagggcgttacac 23932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20320651 - 20320614
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  20320651 taatcaaataaaacaaataattcaaagagggcgttaca 20320614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22172693 - 22172656
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  22172693 taatcaaataaaacaaataattcaaagagggcgttaca 22172656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23705931 - 23705894
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  23705931 taatcaaataaaacaaataattcaaagagggcgttaca 23705894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24672243 - 24672280
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  24672243 taatcaaataaaacaaataattcaaagagggcgttaca 24672280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 39 - 305
Target Start/End: Original strand, 362018 - 362275
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||         |||||||||| |||||    
T  362018 caatggactcaatatcttaacaacttaacagcttagacatctcttatgactccaataatttggatcaacatctta---------caacttaaaccaacat 362108  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | | ||||||||| ||| |||||||||||||    
T  362109 tagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccatta 362208  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaaca 305  Q
     ||||||||||||||  ||||||||   |||| || || ||||| ||||||||||| |||||||||||    
T  362209 taacttcatatcaacgtctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 66 - 250
Target Start/End: Complemental strand, 631095 - 630910
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||| ||||||| |||||||||||||| ||||| | | ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  631095 acaacttaaacatctcatatgactccaataaattgggtcgatatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatacatca 630996  T
Q  166 catta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    ||| | |||||||||| ||||||||||||| |||||||||| | | || |||||| ||||||||||| ||||||||||||||||||    
T  630995 catcagcaaggcaacaaaatcaaataatttgcagcaagtcaacatcaataataatcatcaaatacaatcattacaacttcatatca 630910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 66 - 250
Target Start/End: Complemental strand, 15869030 - 15868845
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||||    
T  15869030 acaacttaaacatctcatatgactccaataaattgggccaacatcttataactcaagcgacttaaaccaacattagcatcttaatgatattaatacatca 15868931  T
Q  166 catta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    ||| | ||||||||||  |||||||||||| |||||||||| | | ||||||||| |||| ||| || ||||||||||||||||||    
T  15868930 catcagcaaggcaacaacatcaaataatttgcagcaagtcaacatcaacaataatcatcagatataatcattacaacttcatatca 15868845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 39 - 262
Target Start/End: Original strand, 15099112 - 15099335
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||| |||| |||||||||| || |||||    
T  15099112 caatggactcaacattttaacaacttaacaacttagacagctcttatgactctaataatttggatcaacatcttacaacttaaacaacttagaccaacat 15099211  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    ||| ||||| ||||||||||||| |||||    ||||||||||| || ||||| | | |||||||||| | | |||||||||  ||||||||||||||||    
T  15099212 tag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaatagtatgcagcaagtcaacatcaacaataatcgtcaaatacaaccatta 15099310  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    | ||||||||| | || ||||||||    
T  15099311 cgacttcatataagcatctttcaca 15099335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 121 - 262
Target Start/End: Original strand, 13844384 - 13844526
Alignment:
Q  121 aacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataat 219  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||| | |||||||||    
T  13844384 aacaacttaaaccaatattaacatcttaatgatattaatacatcacatcaacaaggcaacaccatcaaataatttatagcaagtcatcatcaacaataat 13844483  T
Q  220 tatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
     |||||||||||||||||||||||||||||| || ||||||||    
T  13844484 aatcaaatacaaccattacaacttcatatcagcatctttcaca 13844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 32851194 - 32851361
Alignment:
Q  84 atgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacaca 182  Q
    ||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||      
T  32851194 atgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatcacatcagcaaggcaacaac 32851293  T
Q  183 atcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    |||| ||||||| || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  32851294 atcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 32851361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 13844648 - 13844744
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13844648 caactccatatcaacaactttcacattatatagatattttcacatttaatcatcaacgtaaatcaataatattaaatcatcttaatcatcctctctg 13844744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 15869104 - 15869019
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  15869104 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaca 15869019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 302
Target Start/End: Original strand, 46642679 - 46642860
Alignment:
Q  121 aacaacttaaacaaacattagcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataat 219  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||| |   ||||||||||| || || |||| | ||||| |||| | | |||||||||    
T  46642679 aacaacttagacaaacattagcaccttaatgatattaatacaccacgacggcaaggcaacactattaactaatatgcagcacgtcaacatcaacaataat 46642778  T
Q  220 tatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
     |||||||| |||||||||||||||||||||||  ||||||||   |||| ||||| ||||| |||||||||||  |||||||    
T  46642779 catcaaatataaccattacaacttcatatcaacgtctttcacagtttataaatcttctcaca-ttaatcatcaaattaaatca 46642860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 19857345 - 19857429
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 123  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||    
T  19857345 caatggcctcaacatcttaactacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaac 19857429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 32851109 - 32851183
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  32851109 caatggactcaacatcctaacaacctaacaacttagacatctcttatgactccaataatttggatcaacatctta 32851183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 312
Target Start/End: Original strand, 9923306 - 9923446
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||   ||||     
T  9923306 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataa 9923405  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  9923406 atc-tttcacatttaatcatcaacttaaatccacaacattaa 9923446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 35812450 - 35812171
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||| |||||  |||| |||||||||| || ||||||    
T  35812450 atggagtcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaatatctttcaacttaaacaacttagaccaacatt 35812352  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| |||| | |          |||   |||| |||||  || | ||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  35812351 agcatcctaatcaca----------acag--caagacaacatcattagataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 35812264  T
Q  240 acttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||| ||||||||   |||| ||| || ||||||||||||||||| |||||| |||| ||| |||||||||| | || |||||||    
T  35812263 acttcatatcaacatctttcacaatatataaatc-ttccacatttaatcatcaacttaaatccacaacatt-aatcatcttatttatactctctg 35812171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 234 - 334
Target Start/End: Original strand, 46642939 - 46643038
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    ||||||||||||||| |||||||||||||   |||| |||||||| |||| |||||||||| | || |||||||||||||||||||||||||||||||||    
T  46642939 attacaacttcatattaacaactttcacaatatataaatcttttcgcatt-aatcatcaactttaaacaacaatattaaatcatcttagtcatcctctct 46643037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 302
Target Start/End: Complemental strand, 52873367 - 52873252
Alignment:
Q  186 aaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacattta 285  Q
    |||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||   |||| || || ||||| |||    
T  52873367 aaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-tta 52873269  T
Q  286 atcatcaacgtaaatca 302  Q
    |||||||| ||||||||    
T  52873268 atcatcaaagtaaatca 52873252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 19609363 - 19609472
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| || ||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  19609363 atggactcaacgtctta-cagcttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 19609461  T
Q  140 agcatcttaat 150  Q
    |||||| ||||    
T  19609462 agcatcctaat 19609472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 10357453 - 10357365
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 129  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||||||||    
T  10357453 atggactcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaactta 10357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 11479528 - 11479413
Alignment:
Q  196 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacg 295  Q
    |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||   |||| ||| ||||||||||||||||||||     
T  11479528 cagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaatc-tttcacatttaatcatcaact 11479430  T
Q  296 taaatcaacaatattaa 312  Q
    |||||| |||| |||||    
T  11479429 taaatccacaacattaa 11479413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 10357391 - 10357285
Alignment:
Q  47 tcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatc 145  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||  ||| |    
T  10357391 tcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatatgcaac 10357293  T
Q  146 ttaatgat 153  Q
    ||||||||    
T  10357292 ttaatgat 10357285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 33186136 - 33186273
Alignment:
Q  196 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacg 295  Q
    |||||||||| | | || |||||| |||| ||| ||| |||||||||||||||||||  |||||| |   |||| || |||||||||||||||||||| |    
T  33186136 cagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcataatatataaatattttcacatttaatcatcaaag 33186235  T
Q  296 taaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||  |||||| |||||||||| ||||||||||||    
T  33186236 taaatcattaatatt-aatcatcttattcatcctctctg 33186273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 3514939 - 3514985
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttat 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3514939 caatggactcaacatcttaacaacttaacaacttagacatctcttat 3514985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 15042141 - 15042058
Alignment:
Q  41 atggactcaacatcttaacaacttaa--caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 123  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  15042141 atggactcaacgtctta-caacttaaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaac 15042058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 15112283 - 15112366
Alignment:
Q  41 atggactcaacatcttaacaacttaa--caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 123  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  15112283 atggactcaacgtctta-caacttaaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaac 15112366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 14185094 - 14185193
Alignment:
Q  67 caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcac 166  Q
    ||||||| ||||||| |||||||| | || |||||  |||||||||| |||| || ||||||| || |||||||||| ||||||||||||||||| ||||    
T  14185094 caacttaaacatctcatatgactcga-tagtttggatcaacatcttacaacttaagcaacttagaccaacattagcaccttaatgatattaatacgtcac 14185192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 33185990 - 33186068
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||  ||||| ||||||  |||||||||| ||||    
T  33185990 caatggactcaacatctta-cgacttaacaacttagacatctcatatgataccaatgatttggatcaacatcttacaact 33186068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 15880732 - 15880845
Alignment:
Q  197 agcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgt 296  Q
    ||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| || |||||||||||||| ||||| ||    
T  15880732 agcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaataatcaaagt 15880831  T
Q  297 aaatcaacaatatt 310  Q
    |||||| |||||||    
T  15880832 aaatcatcaatatt 15880845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 19609481 - 19609572
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| ||| || ||||||| |  | ||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  19609481 caaggcagcaccattaaataatatgtaacaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 19609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15480536 - 15480498
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacac 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  15480536 taatcaaataaaacaaataattcaaagagggcgttacac 15480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15488991 - 15488953
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacac 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  15488991 taatcaaataaaacaaataattcaaagagggcgttacac 15488953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 77
Target Start/End: Original strand, 46642661 - 46642691
Alignment:
Q  47 tcaacatcttaacaacttaacaacttagaca 77  Q
    |||||||||||||||||||||||||||||||    
T  46642661 tcaacatcttaacaacttaacaacttagaca 46642691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19243944 - 19243981
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  19243944 taatcaaataaaacaaataattcaaagagggcgttaca 19243981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19858934 - 19858971
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  19858934 taatcaaataaaacaaataattcagagagggcgttaca 19858971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23802040 - 23802003
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  23802040 taatcaaataaaacaaataattcaaagagggcgttaca 23802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 52871168 - 52871205
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  52871168 taatcaaataaaacaaataattcaaagagggcgttaca 52871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 55990646 - 55990683
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  55990646 taatcaaataaaacaaataattcaaagagggcgttaca 55990683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 6e-68; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 262
Target Start/End: Complemental strand, 29915413 - 29915207
Alignment:
Q  57 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  29915413 aacatcttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaataaacattagcatcttaatgatatt 29915314  T
Q  157 aatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 255  Q
    |||||||||||| | ||||||||| | ||  ||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  29915313 aatacatcacatcagcaaggcaacgccattcaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 29915214  T
Q  256 tttcaca 262  Q
    |||||||    
T  29915213 tttcaca 29915207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 5889517 - 5889270
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |                |||||    
T  5889517 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttaaatc----------------aacat 5889434  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  5889433 tagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 5889334  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    ||||||||||||| || ||||||||   |||| || || ||||| ||||||||||| ||||||||    
T  5889333 caacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 5889270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 21741899 - 21741667
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaaca----- 133  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||         
T  21741899 caatggactcaacatcttaacaatttaacaacttagacatctcttatgactccaataatttgggccaacatcttataacttaaacaacttaaacaactta 21741800  T
Q  134 ----aacattagcatcttaatgatattaatacatcacattac---aaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaa 226  Q
        |||||||| ||||| ||||||||||||| |||||  ||   |||||||||| || ||||||| | |||||||||| | | |||||||||  |||||    
T  21741799 aaccaacattag-atcttcatgatattaatacgtcaca--accgtaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaa 21741703  T
Q  227 tacaaccattacaacttcatatcaacaactttcaca 262  Q
    |||||||||||| | ||||||| | || ||||||||    
T  21741702 tacaaccattacgatttcatataagcatctttcaca 21741667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 5889188 - 5889092
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  5889188 caactacatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcataatcatcctctctg 5889092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 12122485 - 12122202
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||  |||||||||| ||||  |||||||||||           
T  12122485 caatggactcaacatctta-caacttaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaact-taacaacttaaa------- 12122395  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
       ||||| |||| ||||||| |||||||  | |||| || ||  ||  ||  || | | |||||||| | | || |||||| |||| ||| ||| ||||    
T  12122394 ---catctcaatggtattaattcatcacaacagcaagacatcatcatttaaacatatgccgcaagtcaccatcaataataatcatcatatataacaatta 12122298  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||  ||||||||   |||| || |||||||||||||||||||| ||||||||  |||||| |||||||||| ||||||||||||    
T  12122297 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattaatatt-aatcatcttattcatcctctctg 12122202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 334
Target Start/End: Original strand, 36460130 - 36460341
Alignment:
Q  122 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataatt 220  Q
    |||||||| || |||||||| ||||| ||||||||||||  |||||    |||| |||||| || ||||||| | |||||||||| | |||| ||||||     
T  36460130 acaacttataccaacattag-atcttcatgatattaatatgtcacaaccgcaagacaacaccattaaataatatgcagcaagtcaacattaataataatc 36460228  T
Q  221 atcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctt 320  Q
    |||| ||| ||| ||||||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| || |||| |||||||||    
T  36460229 atcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattatt-aatcatctt 36460327  T
Q  321 agtcatcctctctg 334  Q
      ||||||||||||    
T  36460328 gttcatcctctctg 36460341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 21555344 - 21555060
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  21555344 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 21555254  T
Q  139 tagcatctt-aatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatt 236  Q
       |||||| |||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| |||    
T  21555253 ---catcttaaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatt 21555157  T
Q  237 acaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||||| || |||||  ||||||||   |||| || ||||||||||||||||||||  |||| || ||||||| |||||||||| ||||||||||||    
T  21555156 acaactttatgtcaacgtctttcacaatatataaatattttcacatttaatcatcaaactaaaacatcaatatt-aatcatcttattcatcctctctg 21555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 21558009 - 21557726
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||| ||| ||||||||| || |||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  21558009 caatggactcaacatct-aacgacttaacaagttggacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 21557917  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| ||||| |  | |||| |||||  ||  ||  || | ||||||||||   | || |||||| |||| ||| ||| ||||    
T  21557916 -----tcttaatggtattaattcatcataacagcaagacaacatcatttaaacatatgcagcaagtcactatcaataataatcatcatatataacaatta 21557822  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||  ||||||||   |||| || ||||||||||||||||||||  |||| || ||||||| |||||||||| ||||||||||||    
T  21557821 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaactaaaacatcaatatt-aatcatcttattcatcctctctg 21557726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 24212422 - 24212526
Alignment:
Q  216 taattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatc 315  Q
    |||| |||| ||| ||| |||||||||||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| ||||    
T  24212422 taatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatc 24212520  T
Q  316 atctta 321  Q
    ||||||    
T  24212521 atctta 24212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 31454971 - 31455043
Alignment:
Q  45 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  31454971 actcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 31455043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 21871775 - 21871707
Alignment:
Q  182 aatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    ||||||||||||| |||||||||| | | ||||||||| ||||||||||| ||||||||||||||||||    
T  21871775 aatcaaataatttgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatca 21871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 21876055 - 21875987
Alignment:
Q  182 aatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    ||||||||||||| |||||||||| | | ||||||||| ||||||||||| ||||||||||||||||||    
T  21876055 aatcaaataatttgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatca 21875987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 334
Target Start/End: Original strand, 30615808 - 30615926
Alignment:
Q  214 aataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaa 313  Q
    |||||| ||||| || ||| |||||||||||||||||||  ||||||||   |||| || ||||||||||||||||| || |||||| | ||||||| ||    
T  30615808 aataatcatcaattataacaattacaacttcatatcaacgtctttcacaatatata-atattttcacatttaatcataaaagtaaattatcaatatt-aa 30615905  T
Q  314 tcatcttagtcatcctctctg 334  Q
    |||||||| ||||||||||||    
T  30615906 tcatcttattcatcctctctg 30615926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 31455765 - 31455862
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctc 332  Q
    |||||||||||||||||||   |||||||   |||| || |||||||||||||||||||| ||||| || ||||||| |||||||||| ||||||||||    
T  31455765 attacaacttcatatcaacgtttttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctc 31455862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 31455584 - 31455656
Alignment:
Q  45 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||   |||||||||| ||||    
T  31455584 actcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttgtatcaacatcttacaact 31455656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 17875102 - 17875180
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| ||||||| | ||||||||||||||||||||  |||||||||||||||||||  ||| |||||| ||||    
T  17875102 caatggactcagcatctta-cgacttaacaacttagacatcttatatgactccaataatttggatcaatatcttacaact 17875180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 35852695 - 35852781
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    ||||||| |||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  35852695 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatctta 35852781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 31455152 - 31455249
Alignment:
Q  234 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctc 332  Q
    |||||||||| ||||||||   |||||||   |||| || |||||||||||||||||||| ||||| || ||||||| |||||||||| ||||||||||    
T  31455152 attacaacttaatatcaacgtttttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctc 31455249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 30615667 - 30615722
Alignment:
Q  63 ttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| || ||||||||||||||||  |||||||||| ||||    
T  30615667 ttaacaacttagacatctcatacgactccaataatttggatcaacatcttacaact 30615722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24474329 - 24474366
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  24474329 taatcaaataaaacaaataattcaaagagggcgttaca 24474366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41860279 - 41860242
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  41860279 taatcaaataaaacaaataattcaaagagggcgttaca 41860242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 302
Target Start/End: Original strand, 362787 - 363031
Alignment:
Q  58 acaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatta 157  Q
    ||||||| |||||||||||||||||||||| |||||||||||||  |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  362787 acaactttacaacttagacatctcttatgaatccaataatttggatcaacatcttacaacttaaacaacttaaaccaacattagcatcttaatgatatta 362886  T
Q  158 atacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaact 256  Q
    ||||||||||| | ||||||||||| ||||| ||||||||||||||||| | | ||||||||| ||| ||||||| ||||||||||||||||||||| ||    
T  362887 atacatcacatcagcaaggcaacaccatcaattaatttacagcaagtcaacatcaacaataatcatctaatacaatcattacaacttcatatcaacatct 362986  T
Q  257 ttcacatagtatagatcttttcacatttaatcatcaacgtaaatca 302  Q
    |||| |   |||| || || ||||| ||||||||||| ||||||||    
T  362987 ttcaaaatatataaatattctcaca-ttaatcatcaaagtaaatca 363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 2649 - 2426
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  2649 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 2550  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
    ||| ||||| ||||||||||||| |||||    ||||||||||| || ||||||  | |||||||||| | | |||||||||  ||||||||||||||||    
T  2549 tag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataaaatgcagcaagtcaacatcaacaataatcgtcaaatacaaccatta 2451  T
Q  238 caacttcatatcaacaactttcaca 262  Q
    | ||||||||| |||| ||||||||    
T  2450 cgacttcatataaacatctttcaca 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 106; Significance: 5e-53; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 106328 - 106457
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||| ||||||||||||| |||||    
T  106328 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataacttggatcaacatcttacaacttaaacaacttaaaccaacat 106427  T
Q  139 tagcatcttaatgatattaatacatcacat 168  Q
    ||||||||||||||||||||||||||||||    
T  106428 tagcatcttaatgatattaatacatcacat 106457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 107797 - 107834
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  107797 taatcaaataaaacaaataattcaaagagggcgttaca 107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 116298 - 116335
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  116298 taatcaaataaaacaaataattcaaagagggcgttaca 116335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 66 - 248
Target Start/End: Original strand, 232 - 414
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||| ||||||| |||||||||||||| |||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  232 acaacttaaacatctcatatgactccaataaattggaccaacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatacatca 331  T
Q  166 cattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatat 248  Q
    ||| |  ||||||||| ||| ||||||||||| ||||||| | | ||||||||| |||||||| || ||||| ||||||||||    
T  332 catcagcaggcaacaccatcgaataatttacaacaagtcaacatcaacaataatcatcaaatataatcattataacttcatat 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 158 - 243
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  158 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaca 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 103; Significance: 3e-51; HSPs: 4)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 66 - 248
Target Start/End: Complemental strand, 23668 - 23486
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||| ||||||| |||||||||||||| |||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  23668 acaacttaaacatctcatatgactccaataaattggaccaacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatacatca 23569  T
Q  166 cattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatat 248  Q
    ||| |  ||||||||| ||| ||||||||||| ||||||| | | ||||||||| |||||||| || ||||| ||||||||||    
T  23568 catcagcaggcaacaccatcgaataatttacaacaagtcaacatcaacaataatcatcaaatataatcattataacttcatat 23486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 23742 - 23657
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  23742 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaca 23657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 20811 - 20770
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatct 80  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  20811 caatggactcaacatcttaacaacttaacaactttgacatct 20770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20193 - 20156
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  20193 taataaaataaaacaaataattcaaggagggcgttaca 20156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 66 - 250
Target Start/End: Complemental strand, 8616 - 8430
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataa-ctgaaacaacttaaacaaacattagcatcttaatgatattaatacatc 164  Q
    |||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| || |||  |||||||  |||||||||||||||||||||||||||||||    
T  8616 acaacttaaacatctcatatgactctaataaattgggccgacatcttataaactcaaatgacttaaatcaacattagcatcttaatgatattaatacatc 8517  T
Q  165 acatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    |||| | ||||||||||  |||||||||||| || ||||||| | | ||||||||| ||||||||||| ||||||||||||||||||    
T  8516 acatcagcaaggcaacaacatcaaataatttgcaacaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatca 8430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 8690 - 8605
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 124  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||  |||||| ||| |||| |||||    
T  8690 caatggactcaacatcctaacaacttaataatttagacatctcttatgactccaataatttggatcaacatattacaacttaaaca 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 90; Significance: 2e-43; HSPs: 4)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 13364 - 13549
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  13364 acaaattaaacatctcatatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatca 13463  T
Q  166 catta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
     || | ||||||||||  |||| ||||||| || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  13464 gatcagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 13549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 25065 - 25193
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  25065 acaaattaaacatctcatatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatca 25164  T
Q  166 catta-caaggcaacacaatcaaataatt 193  Q
     || | ||||||||||  |||| ||||||    
T  25165 gatcagcaaggcaacaacatcatataatt 25193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 13290 - 13364
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  13290 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctta 13364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 24991 - 25065
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24991 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctta 25065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 24916 - 24790
Alignment:
Q  125 acttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatc 223  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||| | | ||||||||| |||    
T  24916 acttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatc 24817  T
Q  224 aaatacaaccattacaacttcatatca 250  Q
    |||||||| ||||||||||||||||||    
T  24816 aaatacaatcattacaacttcatatca 24790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 326
Target Start/End: Complemental strand, 59566 - 59295
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||  |||||||||  |||| |||||||||| || ||||||    
T  59566 atggactcaacatctta-caacttaaacaacttagacatctcatatgacttcaataatttggatcaacatcttgcaacttaaacaacttagaccaacatt 59468  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  |||   ||||||||||| || ||| ||| | |||||||||| | | ||||||||| ||| |||| ||| ||||||    
T  59467 agcatcctaat----------cacgacag--caaggcaacaccattaaaaaatatgcagcaagtcaacatcaacaataatcatccaatataacaattaca 59380  T
Q  240 acttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcat 326  Q
    |||||||||||||| ||||||||   |||| ||| |||||||||||||||||||| |||||| |||| ||| |||||||||| ||||    
T  59379 acttcatatcaacatctttcacaatatataaatc-tttcacatttaatcatcaacttaaatccacaacatt-aatcatcttattcat 59295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 7911 - 7784
Alignment:
Q  125 acttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatc 223  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||| ||||||||||| | | ||||||||| |||    
T  7911 acttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataattcacagcaagtcaacgtcaacaataatcatc 7812  T
Q  224 aaatacaaccattac-aacttcatatca 250  Q
    |||||||| |||||| ||||||||||||    
T  7811 aaatacaatcattacaaacttcatatca 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17982 - 18022
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacacaa 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  17982 taatcaaataaaacaaataattcaaagagggcgttacacaa 18022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 47033 - 46923
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||| |||||||||| || |||||    
T  47033 caatggactcaacatttta-caacttaacaacttagacatctcatatgactccaacaatttggatcaacatcttataacttaaacaacttagaccaacat 46935  T
Q  139 tagcatcttaat 150  Q
    ||||||||||||    
T  46934 tagcatcttaat 46923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 334
Target Start/End: Original strand, 2980 - 3234
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 165  Q
    |||||||| | ||||| |||||||||||||||||||  |||||||||| |||| |||||||||| ||||||||||||||| |||| |            |    
T  2980 acaacttaaaaatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagacaaacattagcatcctaataacg----------a 3069  T
Q  166 cattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcac-ata 264  Q
    ||  |||||||||||  || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||||||||||||  |||||| |||    
T  3070 ca--acaaggcaacaacattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatttttcacgata 3167  T
Q  265 gtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
     |||| ||| |||||||||||||||||||| |||||| |||| ||| |||||||||| |||| |||||||    
T  3168 -tataaatc-tttcacatttaatcatcaacttaaatccacaacatt-aatcatcttattcatactctctg 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 14228 - 14511
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  14228 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaaaatcttacaacttaa-caacttagaca----- 14320  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | || ||||||| | | || |||||| |||  ||| ||| ||||    
T  14321 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaatta 14415  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    |||||||||||||||  |||||||||  |||  || |||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  14416 caacttcatatcaacgtctttcacattatatgaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctctg 14511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 19409 - 19314
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||  |||  |||||||| |||||    
T  19409 caatggactcaacatcttaacaacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacgacttgaacaacttgaacaa 19314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 15503 - 15421
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    ||||||||||||||||  |||||||   |||| || ||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  15503 caacttcatatcaacatttttcacaatatataaatattttcacatttaatcatcaacttaaatcaacaacatt-aatcatctta 15421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 24561 - 24479
Alignment:
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatctta 321  Q
    ||||||||||||||||  |||||||   |||| || ||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  24561 caacttcatatcaacatttttcacaatatataaatattttcacatttaatcatcaacttaaatcaacaacatt-aatcatctta 24479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 34877 - 34951
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  34877 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctta 34951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 145825 - 145938
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  145825 caatggactcaacatctta-caatttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 145923  T
Q  139 tagcatcttaatgat 153  Q
      ||| |||||||||    
T  145924 atgcaacttaatgat 145938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 334
Target Start/End: Complemental strand, 6636 - 6359
Alignment:
Q  45 actcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagca 143  Q
    ||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| || |||||| |           ||    
T  6636 actcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttga-----------ca 6550  T
Q  144 tcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaact 242  Q
    |||||||| ||||||| ||||||| || |||| |||||| ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||||| |    
T  6549 tcttaatggtattaattcatcacaatagcaagacaacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatt 6450  T
Q  243 tcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    ||||||||||  ||||||||   |||| || |||||||||||||||||||| ||||||||  | |||| |||||||||| ||||||||||||    
T  6449 tcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattattatt-aatcatcttattcatcctctctg 6359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 5667 - 5586
Alignment:
Q  47 tcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    ||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||  |||||||||| |||| |||||||||    
T  5667 tcaacatctta-caacttaaacaacttagagatctcatatgactccaataatttggatcaacatcttacaacttaaacaactt 5586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 5705 - 5641
Alignment:
Q  65 aacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 129  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||||| |||| ||||||||||    
T  5705 aacaacttagacatctcatatgactgcaataatttggatcaacatcttacaacttaaacaactta 5641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 5814 - 5751
Alignment:
Q  65 aacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 128  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||||| |||| |||||||||    
T  5814 aacaacttagacatctcatatgactgcaataatttggatcaacatcttacaacttaaacaactt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 11092 - 11007
Alignment:
Q  173 aggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaacttt 258  Q
    ||||||||| ||||||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  11092 aggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatcttt 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9336 - 9299
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  9336 taatcaaataaaacaaataattcaaagagggcgttaca 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 9315 - 9106
Alignment:
Q  41 atggactcaacatcttaacaacttaac-aacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| ||||||||  |||||| ||| ||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  9315 atggactcaacgtctta-caacttaaataacttaaacacctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 9217  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  ||||  ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  9216 agcatcctaat----------cacgacat--caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 9129  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||| ||||||||    
T  9128 acttcatatcaacatctttcaca 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 334
Target Start/End: Original strand, 4624 - 4786
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||||||| || ||||||| | || ||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   ||||     
T  4624 caaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 4723  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    || |||||||||||||||||||| |||||||| || |||| |||||||||| ||||||||||||    
T  4724 atattttcacatttaatcatcaaagtaaatcatcattatt-aatcatcttattcatcctctctg 4786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 171 - 334
Target Start/End: Original strand, 206 - 368
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||||||| || ||||||| | || ||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  ||||||||   ||||     
T  206 caaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 305  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctctg 334  Q
    || ||||||||| |||||||||| |||||||| || |||| |||||||||| ||||||||||||    
T  306 atattttcacatataatcatcaaagtaaatcatcattatt-aatcatcttattcatcctctctg 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 36261 - 36143
Alignment:
Q  183 atcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacat 282  Q
    ||||||||||||||||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||   |||| || || |||||     
T  36261 atcaaataatttacagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcacaatatataaatattctcaca- 36163  T
Q  283 ttaatcatcaacgtaaatca 302  Q
    ||||||||||| ||||||||    
T  36162 ttaatcatcaaagtaaatca 36143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 1454 - 1736
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 138  Q
    |||| ||||| |||||||| | ||||||||||||||||||||| ||| |||||||||||||||  |||||||||| |||| || ||||||| |||         
T  1454 caatagactcgacatctta-cgacttaacaacttagacatctcatataactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 1546  T
Q  139 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccatta 237  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | || ||||||| | | || |||||| |||  ||| ||| ||||    
T  1547 -----tcttaatggtattaattcatcacaacaacaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaatta 1641  T
Q  238 caacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 333  Q
    |||||||||||||||  ||||||||   |||| || |||||||||||||||||||| |||||||| ||||||| |||||||||| | |||||||||    
T  1642 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattaatcctctct 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 10239 - 10030
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||| |||||  ||| ||||||||||  | ||||||    
T  10239 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacgtcttacgacttaaacaacttaggccaacatt 10141  T
Q  140 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattaca 239  Q
    |||||| ||||          ||  |||   ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  10140 agcatcctaat----------cacgaca--gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 10053  T
Q  240 acttcatatcaacaactttcaca 262  Q
    |||||||||||||| ||||||||    
T  10052 acttcatatcaacatctttcaca 10030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 9771 - 9673
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  9771 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 9673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 9638 - 9562
Alignment:
Q  186 aaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||||||| | |||||||||| | | |||  |||| ||| |||| ||||||||||||||||||| |||| ||||||||    
T  9638 aaataatatgcagcaagtcaacatcaacggtaatcatccaatataaccattacaacttcatattaacatctttcaca 9562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 6901 - 6771
Alignment:
Q  172 aaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtataga 271  Q
    |||||| ||| || ||||||| | |||||||||| | | ||||||||| |||||||| || |||||||||| |||||||||  ||||||||   |||| |    
T  6901 aaggcagcaccattaaataatatgcagcaagtcaacatgaacaataatcatcaaatataatcattacaactccatatcaacgtctttcacaatatataaa 6802  T
Q  272 tcttttcacatttaatcatcaacgtaaatca 302  Q
    | |||||||||||||||||||| ||||||||    
T  6801 tattttcacatttaatcatcaaagtaaatca 6771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 312
Target Start/End: Complemental strand, 5599 - 5459
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||| ||| || ||||||| | |||||||| | | | ||||||||| ||| |||| || ||||||||||||||||||||| ||||||||   ||||     
T  5599 caaggcagcaccattaaataatatgcagcaagttaacatcaacaataatcatccaatataaacattacaacttcatatcaacacctttcacaatatataa 5500  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  5499 atc-tttcacatttaatcatcaacttaaatccacaacattaa 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 312
Target Start/End: Original strand, 814 - 954
Alignment:
Q  171 caaggcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatag 270  Q
    ||||||| ||| || | ||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||   |||      
T  814 caaggcagcacgattagataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatatta 913  T
Q  271 atcttttcacatttaatcatcaacgtaaatcaacaatattaa 312  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  914 atc-tttcacatttaatcatcaacttaaatccacaacattaa 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 231 - 335
Alignment:
Q  6 aaataaaacaaataattcatggagggcgttacacaatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggcca 105  Q
    |||||||||||||||||||  |||||||||||||       ||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||  ||    
T  231 aaataaaacaaataattcaaagagggcgttacac-------tcaacatctta-cgacttaacaacttagatatctcatatgactccaataatttggatca 322  T
Q  106 acatcttataact 118  Q
    |||||||| ||||    
T  323 acatcttacaact 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 262
Target Start/End: Complemental strand, 8365 - 8190
Alignment:
Q  75 acatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacattacaag 174  Q
    ||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||||||||| ||||          ||  |||   ||||    
T  8365 acatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacattagcatcctaat----------cacgaca--gcaag 8278  T
Q  175 gcaacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    ||| ||| || ||||||| | |||||||||| | | ||||| ||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  8277 gcagcaccattaaataatatgcagcaagtcaacatcaacaacaatcatccaatataaccattacaacttcatatcaacatctttcaca 8190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 57839 - 57951
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 139  Q
    ||||||||||  ||||| |||||||| ||||||||||||||| |||||||||| ||||||||  |||||||||| |||| |||||||||| || |||||     
T  57839 atggactcaatgtctta-caacttaaacaacttagacatctcatatgactccagtaatttggatcaacatcttacaacttaaacaacttagaccaacata 57937  T
Q  140 agcatcttaatgat 153  Q
     ||| |||||||||    
T  57938 tgcaacttaatgat 57951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 4626 - 4689
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttat-gactccaataatttgg 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||    
T  4626 caatggactcaacatcttaacaacttaataacttagacatctcttatataatccaataatttgg 4689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 2849 - 2772
Alignment:
Q  41 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  2849 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 2772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 76939 - 77038
Alignment:
Q  211 aacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatatt 310  Q
    ||||||||| ||| |||| |||||||||||||||||||| ||| |||||||  | |||| |  ||||||||||||||||||||| |||||| |||| |||    
T  76939 aacaataatcatccaatataaccattacaacttcatatccacatctttcac--aatatataaattttcacatttaatcatcaacttaaatccacaacatt 77036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 76794 - 76867
Alignment:
Q  45 actcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||| ||||| |||||||| |||||| |||||||| |||||||||||||||||||  |||||||||| ||||    
T  76794 actcaacgtctta-caacttaaacaactttgacatctcatatgactccaataatttggatcaacatcttacaact 76867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 74596 - 74645
Alignment:
Q  64 taacaacttagacatctcttatgactccaataatttgggccaacatctta 113  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  74596 taacaacttagacatctcttatgactccaataatttggatcaacatctta 74645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 7642 - 7585
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 123  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  7642 acaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaac 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 2664 - 2581
Alignment:
Q  66 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 150  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  2664 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 2581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 2567 - 2481
Alignment:
Q  176 caacacaatcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 262  Q
    |||||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||| ||| | || ||||||||    
T  2567 caacactattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcaca 2481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 10783 - 10861
Alignment:
Q  39 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 118  Q
    ||||||||||||||||||| | |||||| |||||| ||| ||| ||| |||||||||||||||  |||||||||| ||||    
T  10783 caatggactcaacatctta-cgacttaataacttatacacctcatataactccaataatttggatcaacatcttacaact 10861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 10947 - 11053
Alignment:
Q  214 aataattatcaaatacaaccattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaa 313  Q
    |||||| |||| ||| ||| |||| || |||||||||||  ||||||||   |||| || |||||||||||||||||||  |||||||| ||| ||| ||    
T  10947 aataatcatcatatataacaattaaaaattcatatcaacgtctttcacaatatataaatattttcacatttaatcatcatagtaaatcatcaacatt-aa 11045  T
Q  314 tcatctta 321  Q
    ||||||||    
T  11046 tcatctta 11053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 18539 - 18472
Alignment:
Q  183 atcaaataatttacagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 250  Q
    |||||||||||| || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  18539 atcaaataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 18472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 9803 - 9848
Alignment:
Q  71 ttagacatctcttatgactccaataatttgggccaacatcttataa 116  Q
    |||||||||||||||||||||||||| |||| || |||||||||||    
T  9803 ttagacatctcttatgactccaataagttggaccgacatcttataa 9848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1462 - 1425
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  1462 taatcaaataaaacaaataattcaaagagggcgttaca 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 814 - 777
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  814 taatcaaataaaacaaataattcaaagagggcgttaca 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6450 - 6413
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  6450 taatcaaataaaacaaataattcaaagagggcgttaca 6413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 1780 - 1837
Alignment:
Q  57 aacaacttaacaacttagacatctctt-atgactccaataatttgggccaacatctta 113  Q
    |||| |||||||||||||||| ||||| ||||||||||||| ||||  ||||||||||    
T  1780 aacatcttaacaacttagacaactctttatgactccaataacttggatcaacatctta 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21992 - 22029
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  21992 taatcaaataaaacaaataattcaaagagggcgttaca 22029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3950 - 3987
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  3950 taatcaaataaaacaaataattcaaagagggcgttaca 3987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30171 - 30134
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  30171 taatcaaataaaacaaataattcaaagagggcgttaca 30134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 83341 - 83378
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  83341 taatcaaataaaacaaataattcaaagagggcgttaca 83378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 387323 - 387286
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttaca 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  387323 taatcaaataaaacaaataattcaaagagggcgttaca 387286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 153033 - 153073
Alignment:
Q  1 taatcaaataaaacaaataattcatggagggcgttacacaa 41  Q
    ||||||||||||||||||||||||  ||| |||||||||||    
T  153033 taatcaaataaaacaaataattcaaagagagcgttacacaa 153073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University