View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18148_low_11 (Length: 311)
Name: NF18148_low_11
Description: NF18148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18148_low_11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 13 - 311
Target Start/End: Complemental strand, 33266323 - 33266025
Alignment:
| Q |
13 |
aatatcaaaagaaaaaagtgggatttgcatgtctcaatagaatataaaactatgaaaaacttacatacataactatcatcattcacaacaacttaatgac |
112 |
Q |
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| T |
33266323 |
aatatcaaaagaaaaaagtgggatttgcatgtctcaatagaatataaaactatgaaaaacttacatacataactatcatcattcacaacaacttaatgac |
33266224 |
T |
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| Q |
113 |
catgtttaacacatttagaacaagaaattacaccaaccaaaaagatgacatttcattttaatgttccctcccacaaagtgtgtcatctgtgatcaccaac |
212 |
Q |
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| T |
33266223 |
cctgtttaacacatttagaacaagaaattacaccaaccaaaaagatgacatttcattttaatgttccctcccacaaagtgtgtcatttgtgatcaccaac |
33266124 |
T |
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| Q |
213 |
aacacctgagtgggttccaattccaagcaaaagtactgataaattacttatataactttttgtttaaacatcaaaatattagtatatataaaatataga |
311 |
Q |
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| T |
33266123 |
aacacctgagtgggttccaattccaagcaaaagtactgataaattacttatataactttttgtttaaacatcaaaatattagtatatataaaatataga |
33266025 |
T |
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