View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18149_high_5 (Length: 388)

Name: NF18149_high_5
Description: NF18149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18149_high_5
NF18149_high_5
[»] chr2 (35 HSPs)
chr2 (10-371)||(24567089-24567450)
chr2 (37-167)||(25119784-25119914)
chr2 (32-170)||(10899925-10900063)
chr2 (34-169)||(24842725-24842860)
chr2 (66-170)||(24574563-24574667)
chr2 (66-170)||(22783087-22783191)
chr2 (32-167)||(24303475-24303610)
chr2 (32-170)||(28702648-28702786)
chr2 (32-170)||(19303804-19303942)
chr2 (66-170)||(19301389-19301493)
chr2 (40-164)||(21919494-21919618)
chr2 (66-169)||(21137636-21137739)
chr2 (67-166)||(22682468-22682567)
chr2 (32-146)||(22256759-22256873)
chr2 (32-170)||(24803027-24803165)
chr2 (32-170)||(28722694-28722832)
chr2 (37-162)||(39171475-39171600)
chr2 (37-162)||(40249915-40250040)
chr2 (66-162)||(4219202-4219298)
chr2 (66-162)||(9764173-9764269)
chr2 (66-162)||(9898983-9899079)
chr2 (66-162)||(22916270-22916366)
chr2 (66-162)||(24329159-24329255)
chr2 (66-170)||(26876266-26876370)
chr2 (66-162)||(34791627-34791723)
chr2 (66-132)||(21163357-21163423)
chr2 (32-170)||(24723905-24724043)
chr2 (66-132)||(29253556-29253622)
chr2 (66-132)||(43092015-43092081)
chr2 (66-162)||(10276293-10276389)
chr2 (66-162)||(11396582-11396678)
chr2 (66-162)||(43353736-43353832)
chr2 (66-132)||(27230775-27230841)
chr2 (66-132)||(35262340-35262406)
chr2 (66-132)||(35272965-35273031)
[»] scaffold0264 (1 HSPs)
scaffold0264 (171-327)||(6510-6666)
[»] chr7 (38 HSPs)
chr7 (171-327)||(18404399-18404555)
chr7 (32-170)||(16309184-16309322)
chr7 (32-170)||(13173700-13173838)
chr7 (36-166)||(15087486-15087616)
chr7 (32-170)||(13028413-13028551)
chr7 (32-170)||(13878675-13878813)
chr7 (32-170)||(21212068-21212206)
chr7 (32-170)||(16408331-16408469)
chr7 (66-170)||(16311499-16311603)
chr7 (32-170)||(16547483-16547621)
chr7 (32-170)||(16618041-16618179)
chr7 (66-159)||(16106538-16106631)
chr7 (32-170)||(14172196-14172334)
chr7 (66-170)||(4413487-4413591)
chr7 (32-170)||(18439920-18440058)
chr7 (32-164)||(15466301-15466433)
chr7 (32-121)||(13680922-13681011)
chr7 (66-162)||(4221341-4221437)
chr7 (66-162)||(176223-176319)
chr7 (66-162)||(458460-458556)
chr7 (66-162)||(2707087-2707183)
chr7 (66-162)||(6868704-6868800)
chr7 (66-162)||(8626678-8626774)
chr7 (66-162)||(11003912-11004008)
chr7 (66-170)||(15879296-15879400)
chr7 (66-162)||(17951588-17951684)
chr7 (66-162)||(22098474-22098570)
chr7 (66-132)||(20988420-20988486)
chr7 (66-162)||(1996889-1996985)
chr7 (66-162)||(24743434-24743530)
chr7 (66-162)||(26391568-26391664)
chr7 (66-162)||(40043578-40043674)
chr7 (66-162)||(42875181-42875277)
chr7 (66-132)||(8003540-8003606)
chr7 (66-132)||(9093750-9093816)
chr7 (66-132)||(11014551-11014617)
chr7 (66-132)||(26654810-26654876)
chr7 (66-170)||(9168906-9169010)
[»] chr4 (38 HSPs)
chr4 (171-327)||(15458808-15458964)
chr4 (171-327)||(15819451-15819607)
chr4 (171-327)||(18113878-18114034)
chr4 (171-327)||(18160473-18160629)
chr4 (32-170)||(16852446-16852584)
chr4 (67-160)||(13694805-13694898)
chr4 (32-170)||(17246108-17246246)
chr4 (66-170)||(14712217-14712321)
chr4 (32-170)||(14905760-14905898)
chr4 (66-170)||(17527841-17527945)
chr4 (37-170)||(40455725-40455858)
chr4 (66-146)||(10662657-10662737)
chr4 (66-146)||(10876802-10876882)
chr4 (66-132)||(27816340-27816406)
chr4 (37-162)||(4989160-4989285)
chr4 (37-162)||(5021501-5021626)
chr4 (37-162)||(18753855-18753980)
chr4 (66-162)||(16265230-16265326)
chr4 (66-158)||(16820752-16820844)
chr4 (66-162)||(17927464-17927560)
chr4 (66-162)||(18131643-18131739)
chr4 (66-162)||(22005782-22005878)
chr4 (37-132)||(24649726-24649821)
chr4 (66-132)||(27175469-27175535)
chr4 (66-132)||(30927887-30927953)
chr4 (66-162)||(459928-460024)
chr4 (66-162)||(10741992-10742088)
chr4 (66-162)||(10955761-10955857)
chr4 (66-110)||(14903846-14903890)
chr4 (66-162)||(19945732-19945828)
chr4 (66-162)||(36027656-36027752)
chr4 (66-162)||(49516902-49516998)
chr4 (66-132)||(14837502-14837568)
chr4 (32-158)||(15195285-15195411)
chr4 (66-132)||(27665968-27666034)
chr4 (66-132)||(55746646-55746712)
chr4 (37-162)||(18065340-18065465)
chr4 (66-170)||(16316084-16316188)
[»] chr3 (61 HSPs)
chr3 (171-327)||(12307064-12307220)
chr3 (34-170)||(18696380-18696516)
chr3 (32-170)||(14078799-14078937)
chr3 (32-170)||(14908157-14908295)
chr3 (32-169)||(21639381-21639518)
chr3 (66-170)||(17244703-17244807)
chr3 (32-170)||(53058203-53058341)
chr3 (66-166)||(16306518-16306618)
chr3 (32-170)||(14952721-14952859)
chr3 (32-162)||(11188542-11188672)
chr3 (66-164)||(19886600-19886698)
chr3 (66-170)||(18123169-18123273)
chr3 (90-170)||(2559733-2559813)
chr3 (66-170)||(1062878-1062982)
chr3 (66-166)||(1462961-1463061)
chr3 (66-170)||(8997341-8997445)
chr3 (66-170)||(29934953-29935057)
chr3 (66-170)||(29984107-29984211)
chr3 (34-128)||(15960820-15960914)
chr3 (66-170)||(4432503-4432607)
chr3 (32-115)||(11221387-11221470)
chr3 (66-170)||(15847637-15847741)
chr3 (32-170)||(12754141-12754279)
chr3 (66-132)||(29462608-29462674)
chr3 (108-169)||(5211217-5211278)
chr3 (37-162)||(5580994-5581119)
chr3 (37-162)||(6491707-6491832)
chr3 (37-162)||(9983249-9983374)
chr3 (37-162)||(12288341-12288466)
chr3 (66-170)||(1785467-1785571)
chr3 (66-162)||(5538411-5538507)
chr3 (66-162)||(6183356-6183452)
chr3 (66-170)||(7796011-7796115)
chr3 (66-170)||(9382054-9382158)
chr3 (66-162)||(13131021-13131117)
chr3 (66-162)||(14474972-14475068)
chr3 (66-170)||(16029549-16029653)
chr3 (66-162)||(16392438-16392534)
chr3 (66-162)||(20674587-20674683)
chr3 (66-162)||(23766645-23766741)
chr3 (66-162)||(39381435-39381531)
chr3 (66-161)||(13374058-13374153)
chr3 (66-161)||(13384652-13384747)
chr3 (66-166)||(19658992-19659089)
chr3 (37-162)||(10628309-10628434)
chr3 (37-162)||(12238979-12239104)
chr3 (66-162)||(505560-505656)
chr3 (66-162)||(4753070-4753166)
chr3 (66-162)||(5519619-5519715)
chr3 (66-162)||(5867086-5867182)
chr3 (66-170)||(11207485-11207589)
chr3 (66-162)||(19787773-19787869)
chr3 (66-162)||(24384908-24385004)
chr3 (66-162)||(24669221-24669317)
chr3 (66-162)||(41693000-41693096)
chr3 (37-132)||(16397381-16397476)
chr3 (66-132)||(8784044-8784110)
chr3 (66-132)||(11273775-11273841)
chr3 (66-132)||(28315628-28315694)
chr3 (66-132)||(38204033-38204099)
chr3 (70-170)||(14312806-14312906)
[»] scaffold0001 (1 HSPs)
scaffold0001 (171-327)||(134468-134624)
[»] chr8 (34 HSPs)
chr8 (171-327)||(27010352-27010508)
chr8 (32-170)||(17015094-17015232)
chr8 (32-170)||(17541969-17542107)
chr8 (66-170)||(25164803-25164907)
chr8 (32-170)||(15976874-15977012)
chr8 (32-170)||(22462938-22463076)
chr8 (32-170)||(19941763-19941901)
chr8 (66-170)||(20257078-20257182)
chr8 (66-170)||(22672321-22672425)
chr8 (32-170)||(17287642-17287780)
chr8 (32-170)||(3842273-3842411)
chr8 (34-170)||(21297467-21297603)
chr8 (32-170)||(23791976-23792114)
chr8 (95-170)||(19940630-19940705)
chr8 (32-170)||(45569425-45569563)
chr8 (66-162)||(24666976-24667072)
chr8 (37-162)||(36302278-36302403)
chr8 (66-162)||(15782136-15782232)
chr8 (66-170)||(19234122-19234226)
chr8 (66-170)||(19427666-19427770)
chr8 (66-162)||(26119662-26119758)
chr8 (66-162)||(29075492-29075588)
chr8 (66-162)||(29085743-29085839)
chr8 (66-162)||(32079121-32079217)
chr8 (66-132)||(19138062-19138128)
chr8 (66-132)||(30316150-30316216)
chr8 (66-162)||(251160-251256)
chr8 (66-162)||(814261-814357)
chr8 (66-162)||(3350060-3350156)
chr8 (66-162)||(9367046-9367142)
chr8 (66-170)||(16745745-16745849)
chr8 (66-162)||(36087274-36087370)
chr8 (66-162)||(44490466-44490562)
chr8 (66-132)||(13689995-13690061)
[»] chr5 (50 HSPs)
chr5 (171-327)||(20936347-20936503)
chr5 (32-170)||(26763994-26764132)
chr5 (32-170)||(21200481-21200619)
chr5 (32-162)||(31144781-31144911)
chr5 (32-158)||(13532524-13532650)
chr5 (32-170)||(17455957-17456095)
chr5 (32-170)||(23487138-23487276)
chr5 (32-170)||(25113377-25113515)
chr5 (32-170)||(25172468-25172606)
chr5 (66-170)||(19465485-19465589)
chr5 (66-170)||(21704608-21704712)
chr5 (67-170)||(26782958-26783061)
chr5 (32-170)||(20553294-20553432)
chr5 (37-162)||(6977290-6977415)
chr5 (37-162)||(22677600-22677725)
chr5 (37-162)||(23297761-23297886)
chr5 (37-162)||(39500139-39500264)
chr5 (66-162)||(9337467-9337563)
chr5 (66-162)||(14031555-14031651)
chr5 (66-162)||(23363609-23363705)
chr5 (66-170)||(23393922-23394026)
chr5 (66-162)||(23698293-23698389)
chr5 (66-162)||(30236678-30236774)
chr5 (66-162)||(31834993-31835089)
chr5 (66-162)||(36591769-36591865)
chr5 (66-162)||(39354009-39354105)
chr5 (66-162)||(40391871-40391967)
chr5 (66-132)||(1120584-1120650)
chr5 (66-132)||(5299824-5299890)
chr5 (66-132)||(27621454-27621520)
chr5 (66-132)||(34773422-34773488)
chr5 (66-132)||(42044293-42044359)
chr5 (66-162)||(14567305-14567401)
chr5 (66-162)||(15741482-15741578)
chr5 (66-162)||(17608575-17608671)
chr5 (66-162)||(17720431-17720527)
chr5 (66-162)||(22148029-22148125)
chr5 (66-162)||(24568601-24568697)
chr5 (66-162)||(24826127-24826223)
chr5 (66-162)||(27051489-27051585)
chr5 (66-162)||(27461675-27461771)
chr5 (66-162)||(31350047-31350143)
chr5 (66-162)||(35217016-35217112)
chr5 (66-162)||(36689211-36689307)
chr5 (66-170)||(43620538-43620642)
chr5 (66-132)||(14456294-14456360)
chr5 (66-132)||(16002578-16002644)
chr5 (66-132)||(24809429-24809495)
chr5 (66-132)||(37739249-37739315)
chr5 (66-170)||(24982054-24982158)
[»] chr6 (35 HSPs)
chr6 (171-327)||(27521320-27521476)
chr6 (38-169)||(19874411-19874542)
chr6 (32-170)||(17926319-17926457)
chr6 (84-167)||(13137903-13137986)
chr6 (32-170)||(17062918-17063056)
chr6 (32-170)||(17447120-17447258)
chr6 (32-170)||(17609960-17610098)
chr6 (32-132)||(22307528-22307628)
chr6 (66-170)||(26940939-26941043)
chr6 (32-162)||(11204669-11204799)
chr6 (32-170)||(18553986-18554124)
chr6 (96-170)||(19448610-19448684)
chr6 (96-170)||(19450604-19450678)
chr6 (32-170)||(22385305-22385443)
chr6 (66-162)||(12864236-12864332)
chr6 (66-170)||(20031321-20031425)
chr6 (66-162)||(25984782-25984878)
chr6 (66-162)||(26874107-26874203)
chr6 (66-162)||(32963346-32963442)
chr6 (66-162)||(34808562-34808658)
chr6 (66-132)||(9113893-9113959)
chr6 (37-162)||(27383442-27383567)
chr6 (37-162)||(27473826-27473951)
chr6 (37-162)||(27503009-27503134)
chr6 (66-162)||(3670749-3670845)
chr6 (66-170)||(14054794-14054898)
chr6 (66-170)||(25804365-25804469)
chr6 (66-162)||(26034725-26034821)
chr6 (66-162)||(27351050-27351146)
chr6 (66-162)||(27411790-27411886)
chr6 (66-162)||(32302446-32302542)
chr6 (172-231)||(21996976-21997035)
chr6 (66-132)||(12718236-12718302)
chr6 (66-132)||(16958343-16958409)
chr6 (37-162)||(26042900-26043025)
[»] chr1 (29 HSPs)
chr1 (32-170)||(9345312-9345447)
chr1 (172-327)||(28137559-28137714)
chr1 (32-170)||(21125784-21125922)
chr1 (32-170)||(21207233-21207371)
chr1 (66-170)||(20943290-20943394)
chr1 (32-158)||(25449677-25449803)
chr1 (66-149)||(27857342-27857426)
chr1 (32-170)||(23023402-23023540)
chr1 (32-170)||(21196113-21196251)
chr1 (66-170)||(22431418-22431522)
chr1 (66-166)||(23975896-23975996)
chr1 (37-162)||(51630595-51630720)
chr1 (66-162)||(4176595-4176691)
chr1 (66-162)||(12615755-12615851)
chr1 (66-162)||(12739821-12739917)
chr1 (66-154)||(20874657-20874745)
chr1 (66-162)||(21876441-21876537)
chr1 (66-162)||(35639471-35639567)
chr1 (66-162)||(36237862-36237958)
chr1 (37-132)||(7516607-7516702)
chr1 (37-152)||(22958640-22958755)
chr1 (66-132)||(19186528-19186594)
chr1 (66-131)||(7690903-7690968)
chr1 (66-162)||(3180894-3180990)
chr1 (66-162)||(5641142-5641238)
chr1 (66-162)||(5842497-5842593)
chr1 (66-132)||(38093782-38093848)
chr1 (66-132)||(38104408-38104474)
chr1 (66-132)||(47609368-47609434)
[»] scaffold0047 (2 HSPs)
scaffold0047 (40-170)||(7190-7320)
scaffold0047 (66-132)||(34336-34402)
[»] scaffold0056 (1 HSPs)
scaffold0056 (32-170)||(27084-27222)
[»] scaffold0035 (1 HSPs)
scaffold0035 (66-170)||(111069-111173)
[»] scaffold0622 (1 HSPs)
scaffold0622 (66-164)||(6888-6986)
[»] scaffold0113 (1 HSPs)
scaffold0113 (37-170)||(1736-1869)
[»] scaffold0004 (1 HSPs)
scaffold0004 (32-167)||(209942-210076)
[»] scaffold0022 (4 HSPs)
scaffold0022 (32-170)||(35969-36107)
scaffold0022 (32-170)||(134029-134167)
scaffold0022 (66-170)||(157671-157775)
scaffold0022 (66-132)||(45188-45254)
[»] scaffold0758 (1 HSPs)
scaffold0758 (66-166)||(2890-2990)
[»] scaffold0017 (1 HSPs)
scaffold0017 (32-160)||(9404-9532)
[»] scaffold0037 (1 HSPs)
scaffold0037 (41-170)||(75798-75927)
[»] scaffold0084 (1 HSPs)
scaffold0084 (66-170)||(47849-47953)
[»] scaffold0043 (1 HSPs)
scaffold0043 (66-166)||(3182-3282)
[»] scaffold0498 (1 HSPs)
scaffold0498 (66-170)||(1660-1764)
[»] scaffold0315 (1 HSPs)
scaffold0315 (32-162)||(7209-7338)
[»] scaffold0042 (1 HSPs)
scaffold0042 (32-170)||(4017-4155)
[»] scaffold1820 (1 HSPs)
scaffold1820 (34-170)||(162-298)
[»] scaffold0443 (1 HSPs)
scaffold0443 (66-158)||(2444-2536)
[»] scaffold0382 (1 HSPs)
scaffold0382 (66-170)||(2723-2827)
[»] scaffold1507 (1 HSPs)
scaffold1507 (32-170)||(779-917)
[»] scaffold0925 (1 HSPs)
scaffold0925 (32-170)||(3626-3764)
[»] scaffold0116 (1 HSPs)
scaffold0116 (32-170)||(22372-22510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (66-170)||(9198-9302)
[»] scaffold0011 (1 HSPs)
scaffold0011 (32-132)||(166101-166201)
[»] scaffold0161 (2 HSPs)
scaffold0161 (32-170)||(11505-11643)
scaffold0161 (32-170)||(16178-16316)
[»] scaffold0015 (1 HSPs)
scaffold0015 (37-163)||(190440-190566)
[»] scaffold0272 (1 HSPs)
scaffold0272 (66-170)||(23967-24071)
[»] scaffold0211 (1 HSPs)
scaffold0211 (71-170)||(982-1081)
[»] scaffold0359 (1 HSPs)
scaffold0359 (103-162)||(7191-7250)
[»] scaffold0105 (1 HSPs)
scaffold0105 (66-132)||(38388-38454)


Alignment Details
Target: chr2 (Bit Score: 326; Significance: 0; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 10 - 371
Target Start/End: Complemental strand, 24567450 - 24567089
Alignment:
Q  10 aaaagaatgagtagcactagtatcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactga 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  24567450 aaaagaatgagtagcactagtatcaagatgaaagatgatgaaagcattaaagttaagtactcaaggtttcagactctagtctctagacttcaaatactga 24567351  T
Q  110 agaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagatgttctccacctcgatcagattgaagcattttgatattctt 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24567350 agaaaagttatgtaacttctgattgtgtgaacaagattctaagaagcttacctgctagatgttctccatctcgatcagattgaagcattttgatattctt 24567251  T
Q  210 gcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagacttatgtttcattagatacacatatccaaatctactaaaatca 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24567250 gcctagttggttttctacttcattctgaaatttttggaacaattcaaattatttagacttatgtttcattagatacacatatccaaatctactaaaatca 24567151  T
Q  310 tgagtgaatgtaatgaagcattgaaaaccttctttggctggtgtacttagtggtccacatac 371  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  24567150 tgagtgaatgtaatgaagcattgaaaacatactttagctggtgtacttagtggtccacatac 24567089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 25119784 - 25119914
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||    
T  25119784 atgaaagatgatgaaagcattgaggctatgtactcaaggtttcagactctagtctctggacttcaaattctgaagaaaagctatgtagcttctgatcatg 25119883  T
Q  137 tgaacaagattctaagaagcttacctgctag 167  Q
    ||| |||||| ||||||||||||||||||||    
T  25119884 tgagcaagatcctaagaagcttacctgctag 25119914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 10899925 - 10900063
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    ||||||||||| |||||||||| ||| | |  | ||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||||||| |||    
T  10899925 tcaagatgaaatatgatgaaagtattgaggaaatgtactcaagatttcagactcttgtctctggacttcaaatattgaagaaaggttatgtagcttttga 10900024  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| ||||||||||||||||||||||||||||||    
T  10900025 tcatgtgagcaagattctaagaagcttacctgctagatg 10900063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 24842860 - 24842725
Alignment:
Q  34 aagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgatt 133  Q
    |||||||||||||||||||| ||| | |  | |||| |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||     
T  24842860 aagatgaaagatgatgaaagtattgaggaaatgtacacaagatttcagactctagtctctggacttcaaatattgaagaaaagttacgtagcttctaatc 24842761  T
Q  134 gtgtgaacaagattctaagaagcttacctgctagat 169  Q
     | ||| |||||| |||||||| |||||||||||||    
T  24842760 atatgagcaagatactaagaagtttacctgctagat 24842725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 24574667 - 24574563
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||  ||||| |||||| |||||||||||||||||     
T  24574667 gtactcaagatttcacactctagtttctggacttcaaatactgaagaaaagctgtgtagcttctgatcatgtgagcaagatactaagaagcttacctgca 24574568  T
Q  166 agatg 170  Q
    |||||    
T  24574567 agatg 24574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 22783087 - 22783191
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||  ||||| |||||| || |||||| ||| ||||    
T  22783087 gtactcaagatttctgactctagtttctggagttcaaatactgaagaaaagctatgtagcttctgatcatgtgagcaagatacttagaagcctacttgct 22783186  T
Q  166 agatg 170  Q
    |||||    
T  22783187 agatg 22783191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 24303475 - 24303610
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    ||||||||||| || ||||||| ||| | || | ||||||||| |||||||||||  ||||| ||| |||||||||||||||||  ||||| ||||||||    
T  24303475 tcaagatgaaatattatgaaagtattgaggctatgtactcaagatttcagactcttttctctagacctcaaatactgaagaaaaactatgttgcttctga 24303574  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctag 167  Q
    || ||||| |||| || | |||||||||||||||||    
T  24303575 ttatgtgagcaagcttatgagaagcttacctgctag 24303610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 28702648 - 28702786
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||| ||| |||||||||||||| ||||||||||||||||| |||||| | |||||||| ||||    
T  28702648 tcaaaatgaaagatgatgaaagtattga-gcaaatgtacttaagatttcagactctagtttctggacttcaaatactaaagaaaggctatgtagcctctg 28702746  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  |||||  ||||| || |||||||||||||| |||||    
T  28702747 atcatgtgagaaagatacttagaagcttacctgcaagatg 28702786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 19303804 - 19303942
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  19303804 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 19303903  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  19303904 tcatgtaagcaagattctgagaagcttgccttctagatg 19303942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 19301389 - 19301493
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||||||||  ||| | ||||||||| |||||||| ||| ||    
T  19301389 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctgatcatgtaagcaagattctgagaagcttgccttct 19301488  T
Q  166 agatg 170  Q
    |||||    
T  19301489 agatg 19301493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 21919494 - 21919618
Alignment:
Q  40 aaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtga 139  Q
    ||||| |||||||||||| | || | ||||||||| |||||||||||||||||||||||||| || |||||||||   |||||| |||| |||  |||||    
T  21919494 aaagaggatgaaagcattgaggctatgtactcaagatttcagactctagtctctggacttcagattctgaagaaagcctatgtaacttccgatcatgtga 21919593  T
Q  140 acaagattctaagaagcttacctgc 164  Q
    |||||||| | | ||| ||||||||    
T  21919594 acaagattttgacaagtttacctgc 21919618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 21137739 - 21137636
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||||||| |||| | |||||||||||||||||||||||  |||||| ||| ||||  ||||| |||||| |||||||||| ||||||     
T  21137739 gtactcaagatttcagactttagtttatggacttcaaatactgaagaaaaactatgtaacttttgatcatgtgagcaagatactaagaagctcacctgca 21137640  T
Q  166 agat 169  Q
    ||||    
T  21137639 agat 21137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 22682567 - 22682468
Alignment:
Q  67 tactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgcta 166  Q
    ||||||||||||||||||||||||| | |||||||  | ||||||||||  |||||||| ||||||  | |||| ||||||||||| |||||||||||||    
T  22682567 tactcaaggtttcagactctagtctttagacttcagtttctgaagaaaaactatgtagcatctgatcatctgaaaaagattctaaggagcttacctgcta 22682468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 22256873 - 22256759
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||||||  ||| ||   | ||||||||| |||||||||||||| ||||||   ||||||||||||||||| ||||||| ||||||    
T  22256873 tcaaaatgaaagatgatgaaaatattgaacaaatgtactcaagatttcagactctagtttctggatgccaaatactgaagaaaagatatgtagtttctga 22256774  T
Q  132 ttgtgtgaacaagat 146  Q
    |  ||||| ||||||    
T  22256773 tcatgtgagcaagat 22256759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 24803027 - 24803165
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || |||||| || ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  24803027 tcaagatgaaggatgatgagagtatagaggagatgtactcgagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 24803126  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| ||||||| | ||||| || ||| |||||||    
T  24803127 tcatgtgagcaagattttgagaagtttgccttctagatg 24803165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 28722694 - 28722832
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  |||||||    
T  28722694 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctga 28722793  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  28722794 tcatgttagcaagattctcagaagcttgccttctagatg 28722832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 39171475 - 39171600
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  39171475 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 39171574  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  39171575 ttagtaagattttgagaagcttacct 39171600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 40250040 - 40249915
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| ||||||||||| ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  40250040 atgaaggatgatgaaagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 40249941  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  40249940 ttagtaagattttgagaagcttacct 40249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 4219298 - 4219202
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  4219298 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 4219202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 9764173 - 9764269
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  9764173 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 9764269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 9898983 - 9899079
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  9898983 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 9899079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 22916270 - 22916366
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  22916270 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 22916366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 24329159 - 24329255
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  24329159 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 24329255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 26876370 - 26876266
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  | ||||||  ||| | ||||||||| |||||||| ||| ||    
T  26876370 gtactcaagatttcaaactttagtatctggactacaaatactgaagaagagctatgttacatctgatcatgttagcaagattctgagaagcttgccttct 26876271  T
Q  166 agatg 170  Q
    |||||    
T  26876270 agatg 26876266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 34791627 - 34791723
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  34791627 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 34791723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 21163357 - 21163423
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  21163357 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 21163423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 24724043 - 24723905
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||| ||| | |  | ||||| ||| ||||||||  ||| | || |||| ||||||||||||||||| || || ||||||||    
T  24724043 tcaagatgaaggatgatgaaagtattgaggaaatgtactgaagatttcagaccatagcccctagactacaaatactgaagaaaagctaggttgcttctga 24723944  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  |||||  |||||  |||||||||| ||| |||||||    
T  24723943 tcatgtgagtaagatattaagaagcttgcctactagatg 24723905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 29253622 - 29253556
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  29253622 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 29253556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 43092081 - 43092015
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  43092081 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 43092015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 10276389 - 10276293
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  10276389 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 10276293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 11396582 - 11396678
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  11396582 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 11396678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 43353832 - 43353736
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||  ||| |  |||||| | ||||||||||||    
T  43353832 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgatcatgttagtaagattttgagaagcttacct 43353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 27230841 - 27230775
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  27230841 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 27230775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 35262406 - 35262340
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  35262406 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 35262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 35273031 - 35272965
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  35273031 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 35272965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Original strand, 6510 - 6666
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  6510 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 6609  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  6610 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 6666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Complemental strand, 18404555 - 18404399
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  18404555 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 18404456  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18404455 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 18404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 16309184 - 16309322
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||||||||||||||||||| | || | ||||| ||||||| |||||||||||||||||||||| ||||| |||||||  |||||||||||| |    
T  16309184 tcaagatgaaagatgatgaaagcattgaggctatgtacttaaggttttagactctagtctctggacttcagatactaaagaaaaaatatgtagcttctaa 16309283  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  |||||||||||||||||||||||||| | |||||||    
T  16309284 tcatgtgaacaagattctaagaagcttacatcctagatg 16309322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 13173700 - 13173838
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||||||| ||| |    | ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  13173700 tcaaaatgaaagatgatgaaagtattgagaaaatgtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctatgtagcttctga 13173799  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| ||||||||||||||||| |||||    
T  13173800 tcatgtgagcaagatactaagaagcttacctgcaagatg 13173838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 15087616 - 15087486
Alignment:
Q  36 gatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgt 135  Q
    |||||||||  ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||| |  ||||  |    
T  15087616 gatgaaagagaatgaaagcattgaggctatgtactcaaggtttcagactctagtctctggacttcaaattctaaagaaaagctatgtagttgttgatcat 15087517  T
Q  136 gtgaacaagattctaagaagcttacctgcta 166  Q
    ||||| ||||||||||| |||||||||||||    
T  15087516 gtgaagaagattctaaggagcttacctgcta 15087486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 13028413 - 13028551
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| |||||||||||||||||||| || || |||||||| ||||    
T  13028413 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaatactgaataagagctatgtagcctctg 13028511  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| || ||| |||||||||||||||||||||||    
T  13028512 atcatgtgagcaggatactaagaagcttacctgctagatg 13028551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 13878813 - 13878675
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||    
T  13878813 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctatgaagcctctg 13878715  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| ||||||||||||| ||| |||||    
T  13878714 atcatgtgagcaagatactaagaagcttacttgcaagatg 13878675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 21212068 - 21212206
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  21212068 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaatattgaagaaaagctatgtagcttctg 21212166  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||   ||||  ||||| |||||||| ||||||||||||||    
T  21212167 atcaagtgagtaagatactaagaagtttacctgctagatg 21212206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 16408469 - 16408331
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||||||||||||||| ||| | |  | ||||||||| ||| ||||| |||||||||||||| ||||| | |||||||  ||||||||||||||    
T  16408469 tcaagatgaaagatgatgaaagtattgaggaaatgtactcaagattttagactttagtctctggactttaaatattaaagaaaatctatgtagcttctga 16408370  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| || ||||||||||||||||||||    
T  16408369 tcatgtgagcaagatactgagaagcttacctgctagatg 16408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 16311499 - 16311603
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||||  ||||| |||||| |||||||| ||||||||     
T  16311499 gtactcaagatttcagactctagtttctagacttcaaatactgaagaaaagctatgtagcctctgatcatgtgagcaagatactaagaagtttacctgca 16311598  T
Q  166 agatg 170  Q
    |||||    
T  16311599 agatg 16311603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 16547483 - 16547621
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||| ||||    
T  16547483 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactcaagtttctggacttcaaatactaaagaaaagctatgtagcctctg 16547581  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || |||||||||||||| |||||    
T  16547582 atcatgtgagcaagatacttagaagcttacctgcaagatg 16547621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 16618179 - 16618041
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||| ||||    
T  16618179 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactcaagtttctggacttcaaatactaaagaaaagctatgtagcctctg 16618081  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || |||||||||||||| |||||    
T  16618080 atcatgtgagcaagatacttagaagcttacctgcaagatg 16618041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 16106538 - 16106631
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagctta 159  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||| | ||| ||||| ||||||    
T  16106538 gtactcatggtttcagactctagtctctggacttcagattctgaagaaaagttatgtagcttctgatcatgtgaaaaggatactaaggagctta 16106631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 14172334 - 14172196
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||||||||||||||||||||| ||| | || || ||||||||  |||||||||||||| ||| |||||||||||||||||||||| |||||||| | ||    
T  14172334 tcaagatgaaagatgatgaaagtattga-gcaaatgtactcaaaatttcagactctagtttctagacttcaaatactgaagaaaagctatgtagcctatg 14172236  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  |||||  ||||| || | ||||||||||||||||||    
T  14172235 atcatgtgagaaagatacttaaaagcttacctgctagatg 14172196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 4413487 - 4413591
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||||||| |||||||| ||||||  ||||| |||||| || |||||| |||||||     
T  4413487 gtactcaagatttcagactctggtttctggacttcaaataccgaagaaaagctatgtagcctctgatcatgtgagcaagatactcagaagcctacctgcc 4413586  T
Q  166 agatg 170  Q
    |||||    
T  4413587 agatg 4413591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 18440058 - 18439920
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| ||||||||||||||||||||||| ||||||||    
T  18440058 tcaagatgaaggatgatgagagtatataggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaaaagttatgttgcttctga 18439959  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |   || | ||||||||| |||||||| ||| |||||||    
T  18439958 tcacgttagcaagattctgagaagcttgccttctagatg 18439920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 164
Target Start/End: Complemental strand, 15466433 - 15466301
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||||||| ||| |    | ||||||||| |||||||||||| | | ||||||||||||||| |||||||| |||||||| |||||    
T  15466433 tcaaaatgaaagatgatgaaagtatttagcacatgtactcaagatttcagactctaatttatggacttcaaatactaaagaaaagctatgtagcctctga 15466334  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgc 164  Q
    |  |||||  ||||| || ||||||||||||||    
T  15466333 tcatgtgagaaagatacttagaagcttacctgc 15466301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 13681011 - 13680922
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatg 121  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||    
T  13681011 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcatactctagtttctggacttcaaatactgaagaaaagctatg 13680922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 4221437 - 4221341
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| ||||||||||||||    
T  4221437 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttaagaagcttacct 4221341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 176319 - 176223
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  176319 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 176223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 458460 - 458556
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  458460 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 458556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 2707087 - 2707183
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  2707087 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 2707183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 6868704 - 6868800
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  6868704 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 6868800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 8626774 - 8626678
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  8626774 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 8626678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 11004008 - 11003912
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  11004008 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 11003912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 15879296 - 15879400
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||| ||| ||    
T  15879296 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttgccttct 15879395  T
Q  166 agatg 170  Q
    |||||    
T  15879396 agatg 15879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 17951588 - 17951684
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  17951588 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 17951684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 22098570 - 22098474
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  22098570 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 22098474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 20988486 - 20988420
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  20988486 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 20988420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 1996985 - 1996889
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  1996985 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 1996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 24743530 - 24743434
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  24743530 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 24743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 26391568 - 26391664
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  26391568 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 26391664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 40043578 - 40043674
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  40043578 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 40043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 42875277 - 42875181
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  42875277 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 42875181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 8003540 - 8003606
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  8003540 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 8003606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 9093816 - 9093750
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  9093816 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 9093750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 11014617 - 11014551
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  11014617 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 11014551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 26654810 - 26654876
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  26654810 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 26654876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 9169010 - 9168906
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    |||||| || ||||| ||| |||| || ||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  9169010 gtactctagatttcaaactttagtatccggactgcaaatactgaagaagagctatgtcacttctgatcatgttagtaagattctgagaagcttgccttct 9168911  T
Q  166 agatg 170  Q
    |||||    
T  9168910 agatg 9168906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Complemental strand, 15458964 - 15458808
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  15458964 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 15458865  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  15458864 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 15458808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Complemental strand, 15819607 - 15819451
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  15819607 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 15819508  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  15819507 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 15819451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Original strand, 18113878 - 18114034
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  18113878 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 18113977  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18113978 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 18114034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Complemental strand, 18160629 - 18160473
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  18160629 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 18160530  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18160529 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 18160473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 16852584 - 16852446
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||    
T  16852584 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaataccgaagaaaagctatgtagcttttg 16852486  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || |||||||||||| |||||||    
T  16852485 atcatgtgagcaagatactcagaagcttacctactagatg 16852446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 13694898 - 13694805
Alignment:
Q  67 tactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttac 160  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||| |||||||||||||  |||||| ||||||||||| |||||||    
T  13694898 tactcaaggcttcagactctagtctctggacttcatattctgaagaaaagttgtgtagcttctgatcatgtgaagaagattctaaggagcttac 13694805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17246246 - 17246108
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||| ||| |||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||    
T  17246246 tcaaaatgaaagatgatgaaagtattga-gcaaatgtacttaagatttcagactctagtttctggacttcaaataccgaagaaaagctatgtagcctctg 17246148  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || |||||||||||||| |||||    
T  17246147 atcatgtgagcaagatacttagaagcttacctgcaagatg 17246108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 14712217 - 14712321
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||||||||  ||||| ||||||||| |||||||| ||| ||    
T  14712217 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctgatcatgtgagcaagattctgagaagcttgccttct 14712316  T
Q  166 agatg 170  Q
    |||||    
T  14712317 agatg 14712321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 14905760 - 14905898
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||||| |||||| | |||||||||||||||||||||| | |||||||||||||    
T  14905760 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagaatctagtttatggacttcaaatactgaagaaaggctatgtagcttctg 14905858  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| ||| || || ||||| |||||||| |||||    
T  14905859 atcatgtgagcaaaatacttagaaggttacctgcaagatg 14905898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 17527841 - 17527945
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||||||  ||| ||| |  ||||  |||||  ||||||||||| ||||||||||||    
T  17527841 gtactcaaggtttcagactatagtatctggacttcaaattttgaagaaaatctatatagttgatgatcatgtgatgaagattctaaggagcttacctgct 17527940  T
Q  166 agatg 170  Q
    |||||    
T  17527941 agatg 17527945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 40455725 - 40455858
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || |||||||  | ||||||||| ||||| ||| | || |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  40455725 atgaaggatgatgagagtattaaagaaatgtactcaagatttcaaactttggtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 40455824  T
Q  137 tgaacaagattctaagaagcttacctgctagatg 170  Q
    | |  |||||| | |||||||||||| |||||||    
T  40455825 ttagtaagattttgagaagcttaccttctagatg 40455858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 10662657 - 10662737
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagat 146  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||  ||||| |||||| ||  ||||| ||||||    
T  10662657 gtactcaagatttcaaaccctagtctctggacttcaaatactgaagaaaatctatgttgcttctaatcatgtgagcaagat 10662737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 10876802 - 10876882
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagat 146  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||  ||||| |||||| ||  ||||| ||||||    
T  10876802 gtactcaagatttcaaaccctagtctctggacttcaaatactgaagaaaatctatgttgcttctaatcatgtgagcaagat 10876882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 27816340 - 27816406
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||||| ||||||||||||||||| ||||| |||||||||    
T  27816340 gtactcaagatttcaaactttagtttctggactgcaaatactgaagaaaagctatgttgcttctgat 27816406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 4989160 - 4989285
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  4989160 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 4989259  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  4989260 ttagtaagattttgagaagcttacct 4989285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 5021626 - 5021501
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  5021626 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 5021527  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  5021526 ttagtaagattttgagaagcttacct 5021501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 18753855 - 18753980
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  18753855 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 18753954  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  18753955 ttagtaagattttgagaagcttacct 18753980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 16265326 - 16265230
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  16265326 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 16265230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 16820752 - 16820844
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagctt 158  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||| ||||  ||| | ||||||||| | ||||||    
T  16820752 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttttgatcatgtaagcaagattctgataagctt 16820844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 17927560 - 17927464
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  17927560 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 17927464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 18131643 - 18131739
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  18131643 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 18131739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 22005878 - 22005782
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  22005878 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 22005782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 24649821 - 24649726
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  24649821 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 24649726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 27175535 - 27175469
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  27175535 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 27175469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 30927887 - 30927953
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  30927887 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 30927953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 460024 - 459928
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||| ||  ||| |  |||||| | ||||||||||||    
T  460024 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctaatcatgttagtaagattttgagaagcttacct 459928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 10741992 - 10742088
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  10741992 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 10742088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 10955761 - 10955857
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  10955761 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 10955857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 14903846 - 14903890
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaa 110  Q
    |||||||||||||||||||||||| ||||||||||| || |||||    
T  14903846 gtactcaaggtttcagactctagtatctggacttcagattctgaa 14903890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 19945732 - 19945828
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| | |||||||  ||| |  |||||| | ||||||||||||    
T  19945732 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgtttctgatcatgttagtaagattttgagaagcttacct 19945828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 36027752 - 36027656
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  36027752 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 36027656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 49516998 - 49516902
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  49516998 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 49516902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 14837502 - 14837568
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||    
T  14837502 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgat 14837568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 15195285 - 15195411
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||| ||| ||||| ||| |||| |||| ||| |||||||||||||| || |||||  |||||||    
T  15195285 tcaagatgaaggatgatgagagtatagaggagatgtacttaagatttcaaactttagtatctgaactgcaaatactgaagaagagctatgttacttctga 15195384  T
Q  132 ttgtgtgaacaagattctaagaagctt 158  Q
    |  ||| | ||||||||| ||||||||    
T  15195385 tcatgttagcaagattctgagaagctt 15195411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 27666034 - 27665968
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  27666034 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 27665968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 55746646 - 55746712
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  55746646 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 55746712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 18065465 - 18065340
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| | || |||||| | ||||| ||||||||||| ||||| |||||||||  ||    
T  18065465 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttggtttctggattgcaaattctgaagaaaagctatgttgcttctgatcatg 18065366  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  18065365 tcagtaagattttgagaagcttacct 18065340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 16316188 - 16316084
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    |||||| || ||||| ||| |||| || ||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  16316188 gtactctagatttcaaactttagtatccggactgcaaatactgaagaagagctatgtcacttctgatcttgttagtaagattctgagaagcttgccttct 16316089  T
Q  166 agatg 170  Q
    |||||    
T  16316088 agatg 16316084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 327
Target Start/End: Complemental strand, 12307220 - 12307064
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  12307220 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 12307121  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  12307120 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 12307064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 18696380 - 18696516
Alignment:
Q  34 aagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgatt 133  Q
    |||||||||||||||||||| ||| | || | ||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||     
T  18696380 aagatgaaagatgatgaaagaattgaggctatgtactcaagatttcagactttagtctatggacttcaaatactgaagaaaagtgatgtagcttctgatc 18696479  T
Q  134 gtgtgaacaagattctaagaagcttacctgctagatg 170  Q
     ||| | |||||||||||||||||||||| |||||||    
T  18696480 atgtaagcaagattctaagaagcttacctactagatg 18696516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 14078799 - 14078937
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    ||||||||||||| |||||||| ||| | |  | ||||||||| ||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  14078799 tcaagatgaaagaagatgaaagtattgaggtaatgtactcaagatttcaaactctagtctttggacttcaaatattgaagaaaagctatgtagcttctga 14078898  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| ||||||||||||||| |||||||    
T  14078899 tcatgtgagcaagatactaagaagcttaccttctagatg 14078937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 14908157 - 14908295
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||| ||| ||| | |  | ||||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  14908157 tcaaaatgaaagatgatggaagtattgaggaaatgtactcaagatttcatactctagtttctggacttcaaatacttaagaaaagctatgtagcttctga 14908256  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| |||||||||||||||||||||||    
T  14908257 tcatgtgagcaagatactaagaagcttacctgctagatg 14908295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 21639518 - 21639381
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  21639518 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctatgtagcttctg 21639420  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagat 169  Q
    ||  ||||| |||||| || | |||| ||||||||||||    
T  21639419 atcatgtgagcaagatacttaaaagcctacctgctagat 21639381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 17244703 - 17244807
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||  ||||| ||||||  ||||||||||||||||     
T  17244703 gtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctatgtagcctctgatcatgtgagcaagatagtaagaagcttacctgca 17244802  T
Q  166 agatg 170  Q
    |||||    
T  17244803 agatg 17244807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 53058203 - 53058341
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  53058203 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactaaagatttcagactctagtttttggacttcaaatactgaagaaaagttatgtagcctctg 53058301  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  |||||  ||||| || |||||||||||||| |||||    
T  53058302 atcatgtgagtaagatacttagaagcttacctgcaagatg 53058341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 16306518 - 16306618
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||||||  |||||||||| ||||  ||||||||||||| |||| ||||||| ||||    
T  16306518 gtactcaaggtttcagactctagtctttggacttcagattctgaagaaaaactatgtagcttatgatcatgtgaacaagattataaggagcttacttgct 16306617  T
Q  166 a 166  Q
    |    
T  16306618 a 16306618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 14952859 - 14952721
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| ||||||||| ||||| | |||||||| ||| |||||| ||    
T  14952859 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggactttaaatattaaagaaaagctatttagcttttg 14952761  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  |||||||||||| || ||||||||||||| ||||||    
T  14952760 atcatgtgaacaagatacttagaagcttacctgttagatg 14952721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 11188672 - 11188542
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||||||| ||| |    | ||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||    
T  11188672 tcaaaatgaaagatgatgaaagtattgagaaaatgtactcaagatttcagactctagtttctggacatcaaatactgaagaaaagctatgttgcttctga 11188573  T
Q  132 ttgtgtgaacaagattctaagaagcttacct 162  Q
    |  |||||  ||||| || ||||||||||||    
T  11188572 tcatgtgagaaagatacttagaagcttacct 11188542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 19886600 - 19886698
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgc 164  Q
    ||||| ||| |||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||  ||||| |||||| ||||||| |||||||||    
T  19886600 gtacttaagatttcagactctagtttttggacttcaaatactgaagaaaagctatgtagcctctgatcatgtgagcaagatactaagaaacttacctgc 19886698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 18123169 - 18123273
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||  | ||| |||||| || ||||||||||||||     
T  18123169 gtactaaagatttcaaactctagtttctggacttcaaatactgaagaaaagttatgtagtctctgatcatctgagcaagatacttagaagcttacctgca 18123268  T
Q  166 agatg 170  Q
    |||||    
T  18123269 agatg 18123273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 2559813 - 2559733
Alignment:
Q  90 ctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |||||||||| |||||||||||||||| |||||||| ||||||  ||||| |||||| ||||||||||||||||| |||||    
T  2559813 ctctggactttaaatactgaagaaaagctatgtagcctctgatcatgtgagcaagatactaagaagcttacctgcaagatg 2559733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 1062982 - 1062878
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||| ||| ||||| ||| |||| |||||||| ||||||||||||||||||||||| |||||||||   || | ||||||||| |||||||| ||| ||    
T  1062982 gtacttaagatttcaaactttagtatctggactgcaaatactgaagaaaagttatgttgcttctgatcacgttagcaagattctgagaagcttgccttct 1062883  T
Q  166 agatg 170  Q
    |||||    
T  1062882 agatg 1062878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 1463061 - 1462961
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||||||||||||||||   ||||||||| | ||  |||||||||||||||||| | |||||  |||||| || |||||||| ||||||||||||    
T  1463061 gtactcaaggtttcagactctaacatctggactttagattttgaagaaaagttatgtaggtgctgatcatgtgaagaaaattctaaggagcttacctgct 1462962  T
Q  166 a 166  Q
    |    
T  1462961 a 1462961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 8997341 - 8997445
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || ||||| |||||||||  ||| | ||||||||| |||||||| ||| ||    
T  8997341 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttgcttctgatcatgttagcaagattctgagaagcttgccttct 8997440  T
Q  166 agatg 170  Q
    |||||    
T  8997441 agatg 8997445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 29934953 - 29935057
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| |||  ||| |||||||| |||||||||||||| |||||||| |||||||||  ||| | ||||||||| |||||||| ||| ||    
T  29934953 gtactcaagatttcaaacttgagtatctggactgcaaatactgaagaagagttatgttgcttctgatcatgtaagcaagattctgagaagcttgccttct 29935052  T
Q  166 agatg 170  Q
    |||||    
T  29935053 agatg 29935057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 29984107 - 29984211
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| |||  ||| |||||||| |||||||||||||| |||||||| |||||||||  ||| | ||||||||| |||||||| ||| ||    
T  29984107 gtactcaagatttcaaacttgagtatctggactgcaaatactgaagaagagttatgttgcttctgatcatgtaagcaagattctgagaagcttgccttct 29984206  T
Q  166 agatg 170  Q
    |||||    
T  29984207 agatg 29984211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 15960820 - 15960914
Alignment:
Q  34 aagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttc 128  Q
    ||||||||| |||||||||| ||| | |  | ||||||||  |||||||||||| |||||||| |||||||| |||||||||| |||||||||||    
T  15960820 aagatgaaatatgatgaaagtattgaggatatgtactcaacatttcagactctattctctggaattcaaatattgaagaaaagctatgtagcttc 15960914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 4432607 - 4432503
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| | ||| ||||| |||||||||||| ||    
T  4432607 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgatcatgttagcaaaattctgagaagcttaccttct 4432508  T
Q  166 agatg 170  Q
    |||||    
T  4432507 agatg 4432503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 11221470 - 11221387
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaa 115  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  11221470 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaatactaaagaaaa 11221387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 15847741 - 15847637
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||| | |||||||||||||| |||||||| |||||||||  ||||| ||||||| | ||||| || ||| ||    
T  15847741 gtactcaagatttcaaactttagtatctggaatgcaaatactgaagaagagttatgttgcttctgatcatgtgagcaagattttgagaagtttgccttct 15847642  T
Q  166 agatg 170  Q
    |||||    
T  15847641 agatg 15847637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 12754141 - 12754279
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||| ||| || ||  ||| || ||||| ||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  12754141 tcaagatgaaggatggtgagagtatagaagagatgtacttaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 12754240  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| | ||||  | |||||||| ||| |||||||    
T  12754241 tcatgtgagccagatattgagaagctttccttctagatg 12754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 29462608 - 29462674
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| |||||||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  29462608 gtactcaagatttcaaactctagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 29462674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 5211278 - 5211217
Alignment:
Q  108 gaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagat 169  Q
    ||||||||| |||||||||||||||  ||||| |||||| || |||||||||||||||||||    
T  5211278 gaagaaaagctatgtagcttctgatcatgtgagcaagatacttagaagcttacctgctagat 5211217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 5580994 - 5581119
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  5580994 atgaaagatgatgagagtatagaagatatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 5581093  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  5581094 ttagtaagattttgagaagcttacct 5581119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 6491707 - 6491832
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  6491707 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 6491806  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  6491807 ttagtaagattttgagaagcttacct 6491832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 9983249 - 9983374
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  9983249 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 9983348  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  9983349 ttagtaagattttgagaagcttacct 9983374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 12288341 - 12288466
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  12288341 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 12288440  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  12288441 ttagtaagattttgagaagcttacct 12288466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 1785467 - 1785571
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  1785467 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgatcatgttagtaagattctgagaagcttgccttct 1785566  T
Q  166 agatg 170  Q
    |||||    
T  1785567 agatg 1785571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 5538411 - 5538507
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  5538411 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 5538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 6183356 - 6183452
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  6183356 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 6183452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 7796011 - 7796115
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| | |||||||  ||| |  |||||| |||||||||| ||| ||    
T  7796011 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttggttctgatcatgttagtaagattttaagaagcttgccttct 7796110  T
Q  166 agatg 170  Q
    |||||    
T  7796111 agatg 7796115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 9382054 - 9382158
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  9382054 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgtcacttctgatcatgttagtaagattctgagaagcttgccttct 9382153  T
Q  166 agatg 170  Q
    |||||    
T  9382154 agatg 9382158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 13131117 - 13131021
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  13131117 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 13131021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 14475068 - 14474972
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  14475068 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 14474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 16029653 - 16029549
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||  |||||||| |||| ||||||||||| | ||| ||||| |||||||||  |||||  ||||| ||||||||||| | ||||    
T  16029653 gtactcaagatttcaaaccttagtctctagactacaaatactgaaaataagctatgttgcttctgatcatgtgaggaagatactaagaagcttgcatgct 16029554  T
Q  166 agatg 170  Q
    |||||    
T  16029553 agatg 16029549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 16392438 - 16392534
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  16392438 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 16392534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 20674587 - 20674683
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  20674587 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 20674683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 23766741 - 23766645
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  23766741 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 23766645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 39381531 - 39381435
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  39381531 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 39381435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 13374058 - 13374153
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacc 161  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||||||    
T  13374058 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacc 13374153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 13384652 - 13384747
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacc 161  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||||||    
T  13384652 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacc 13384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 19658992 - 19659089
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||| ||||||||||| ||||   ||||||||||| || ||||||||||| |||||||||   |||  | |||| ||||||||||| ||||||||||||    
T  19658992 gtactaaaggtttcagaatctaacatctggacttcagattctgaagaaaagctatgtagct---gatcatctgaagaagattctaaggagcttacctgct 19659088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 10628309 - 10628434
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| | || |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  10628309 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttggtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 10628408  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  10628409 tcagtaagattttgagaagcttacct 10628434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 12238979 - 12239104
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||| ||||| ||||| |||||||||  ||    
T  12238979 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaataaaagctatgttgcttctgatcatg 12239078  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  12239079 ttagtaagattttgagaagcttacct 12239104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 505560 - 505656
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  505560 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 505656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 4753166 - 4753070
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  4753166 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 4753070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 5519715 - 5519619
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||  ||| |  |||||| | ||||||||||||    
T  5519715 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgatcatgttagtaagattttgagaagcttacct 5519619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 5867086 - 5867182
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  5867086 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 5867182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 11207485 - 11207589
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||| ||  ||| |  |||||||| |||||||| ||| ||    
T  11207485 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgtcacttctaatcatgttagtaagattctgagaagcttgccttct 11207584  T
Q  166 agatg 170  Q
    |||||    
T  11207585 agatg 11207589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 19787869 - 19787773
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| | |||||||  ||| |  |||||| | ||||||||||||    
T  19787869 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgtttctgatcatgttagtaagattttgagaagcttacct 19787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 24384908 - 24385004
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  24384908 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 24385004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 24669317 - 24669221
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  24669317 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 24669221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 41693096 - 41693000
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  41693096 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 41693000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 16397381 - 16397476
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| | || |||||| | ||||||||||||||||| ||||| |||||||||    
T  16397381 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttggtttctggattgcaaatactgaagaaaagctatgttgcttctgat 16397476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 8784110 - 8784044
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  8784110 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 8784044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 11273775 - 11273841
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  11273775 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 11273841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 28315628 - 28315694
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  28315628 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 28315694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 38204099 - 38204033
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  38204099 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 38204033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 14312806 - 14312906
Alignment:
Q  70 tcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagat 169  Q
    ||||| ||||| ||| |||| ||| |||| |||||||||||||| || |||||  ||||||||  ||| | ||| ||||| |||||||| ||| ||||||    
T  14312806 tcaagatttcaaactttagtatctagactgcaaatactgaagaatagctatgttacttctgatcatgttagcaaaattctgagaagcttgccttctagat 14312905  T
Q  170 g 170  Q
    |    
T  14312906 g 14312906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 327
Target Start/End: Original strand, 134468 - 134624
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |  | ||| ||   |||| ||| ||| |||    
T  134468 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattccttgaataaagtaaatgattcagattta 134567  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  134568 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 134624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 327
Target Start/End: Original strand, 27010352 - 27010508
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |  | ||| ||   |||| ||| ||| |||    
T  27010352 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattccttgaagaaagtaaatgattcagattta 27010451  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  27010452 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 27010508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17015232 - 17015094
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  17015232 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggactttaaatactgaagaaaagctatgtagcttctg 17015134  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| ||||||||||||||||| |||||    
T  17015133 atcatgtgagcaagatactaagaagcttacctgcaagatg 17015094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 17541969 - 17542107
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  17541969 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggactttaaatactgaagaaaagctatgtagcttctg 17542067  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| ||||||||||||||||| |||||    
T  17542068 atcatgtgagcaagatactaagaagcttacctgcaagatg 17542107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 25164907 - 25164803
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||||  ||||| |||||| |||||||||||||||||     
T  25164907 gtactcaagatttcagactctagtttctggactttaaatactgaagaaaagctatgtagtttctgatcatgtgagcaagatactaagaagcttacctgca 25164808  T
Q  166 agatg 170  Q
    |||||    
T  25164807 agatg 25164803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 15977012 - 15976874
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||| |||||||| | |||||||||||||||||||||||| |||||||| ||||    
T  15977012 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcatactctagtttatggacttcaaatactgaagaaaagctatgtagcctctg 15976914  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| ||||||||||||||||| |||||    
T  15976913 atcatgtgagcaagatactaagaagcttacctgcaagatg 15976874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 22462938 - 22463076
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||||||||||||||||||||| ||| | || || ||||| ||| ||||| |||||| | |||||||||||| ||||||||||||| |||||||| ||||    
T  22462938 tcaagatgaaagatgatgaaagtattga-gcaaatgtacttaagatttcaaactctactatctggacttcaagtactgaagaaaagctatgtagcatctg 22463036  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| |||||||||||||||||||||||    
T  22463037 atcatgtgaccaagatactaagaagcttacctgctagatg 22463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 19941901 - 19941763
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||  ||| | | || ||||||||||||||| || |||||||||||||| ||||||||||| || |||||||| ||||||||    
T  19941901 tcaagatgaaggatgatgaaactattgaggagatgtactcaaggtttcaaaccctagtctctggactacaaatactgaaaaagagttatgttgcttctga 19941802  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | |||||| ||||| ||||| |||||||||||    
T  19941801 tcatgttagcaagatactaaggagcttgcctgctagatg 19941763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 20257078 - 20257182
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||| | ||||||||| |||| ||| |||||||||||||||||||||||| |||||||||||||  |||||  ||||| ||||||||||| |||||     
T  20257078 gtactcatgatttcagactttagtttctagacttcaaatactgaagaaaagttgtgtagcttctgatcatgtgagaaagatactaagaagctttcctgca 20257177  T
Q  166 agatg 170  Q
    |||||    
T  20257178 agatg 20257182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 22672425 - 22672321
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||| ||| |||||||||||||| ||||| ||| |||||| ||||||||  |||||||||||||||  ||||| |||||| || |||||||||||||||    
T  22672425 gtacttaagatttcagactctagtttctgggctttaaataccgaagaaaatctatgtagcttctgatcatgtgagcaagatacttagaagcttacctgct 22672326  T
Q  166 agatg 170  Q
    |||||    
T  22672325 agatg 22672321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 17287642 - 17287780
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||| |||||||| |||| |||| |||||||||||||||| |||||||| ||||    
T  17287642 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcatactctagtttctgaactttaaatactgaagaaaagctatgtagcctctg 17287740  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  |||||  ||||| || |||||||||||||| |||||    
T  17287741 atcatgtgagaaagatacttagaagcttacctgcaagatg 17287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 3842411 - 3842273
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  3842411 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 3842312  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  3842311 tcatgtaagcaagattctgagaagcttgccttctagatg 3842273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 21297603 - 21297467
Alignment:
Q  34 aagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgatt 133  Q
    |||||||| |||||||| || ||  ||| || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||||||||     
T  21297603 aagatgaaggatgatgagagtatagaagagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctgatc 21297504  T
Q  134 gtgtgaacaagattctaagaagcttacctgctagatg 170  Q
     ||||| ||||||  | |||||||| ||| |||||||    
T  21297503 atgtgagcaagatattgagaagcttgccttctagatg 21297467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23792114 - 23791976
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||| ||| |||||||||||||| |||||||| ||||||||    
T  23792114 tcaagatgaaggatgatgagagtatagaagaaatgtactcaagatttcaaactttagtatctgtactgcaaatactgaagaagagttatgttgcttctga 23792015  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  23792014 tcatgtaagcaagattctgagaagcttgccttctagatg 23791976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Complemental strand, 19940705 - 19940630
Alignment:
Q  95 gacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |||||||||||||||||||||| |||||||||||| ||  ||||| |||||| || ||||||||||||| ||||||    
T  19940705 gacttcaaatactgaagaaaagctatgtagcttctaatcatgtgagcaagatactcagaagcttacctgttagatg 19940630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 45569425 - 45569563
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  45569425 tcaagatgaaggatgatgagagtatagaagaaatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 45569524  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  || || ||||||  | |||||||| ||| |||||||    
T  45569525 tcatgcgagcaagatattgagaagcttgccttctagatg 45569563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 24667072 - 24666976
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    |||||||| |||||||| |||||||| | || |||| || ||||||||||| ||||||||| || ||  | |||||||||||||||| |||||||||    
T  24667072 gtactcaacgtttcagaatctagtctttcgagttcagattctgaagaaaagctatgtagctcctaatcatttgaacaagattctaaggagcttacct 24666976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 36302403 - 36302278
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  36302403 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 36302304  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  36302303 ttagtaagattttgagaagcttacct 36302278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 15782136 - 15782232
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  15782136 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 15782232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 19234226 - 19234122
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||| ||| ||    
T  19234226 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttgccttct 19234127  T
Q  166 agatg 170  Q
    |||||    
T  19234126 agatg 19234122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 19427770 - 19427666
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||| ||| ||    
T  19427770 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagatatgttgcttctgatcatgttagtaagattttgagaagcttgccttct 19427671  T
Q  166 agatg 170  Q
    |||||    
T  19427670 agatg 19427666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 26119758 - 26119662
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  26119758 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 26119662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 29075588 - 29075492
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  29075588 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 29075492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 29085839 - 29085743
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  29085839 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 29085743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 32079121 - 32079217
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  32079121 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 32079217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 19138128 - 19138062
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  19138128 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 19138062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 30316150 - 30316216
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  30316150 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 30316216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 251256 - 251160
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||  ||| |  |||||| | ||||||||||||    
T  251256 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgatcatgttagtaagattttgagaagcttacct 251160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 814357 - 814261
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||  ||| |  |||||| | ||||||||||||    
T  814357 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgatcatgttagtaagattttgagaagcttacct 814261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 3350060 - 3350156
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  3350060 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 3350156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 9367142 - 9367046
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  9367142 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 9367046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 16745849 - 16745745
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| | |||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  16745849 gtactcaagatttcaaactttagtatttggactgcaaatactgaagaagagctatgttacttctgatcatgttagtaagattctgagaagcttgccttct 16745750  T
Q  166 agatg 170  Q
    |||||    
T  16745749 agatg 16745745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 36087370 - 36087274
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  36087370 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 36087274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 44490562 - 44490466
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  44490562 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 44490466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 13689995 - 13690061
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  13689995 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 13690061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 327
Target Start/End: Complemental strand, 20936503 - 20936347
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |  | ||| ||   |||| ||| ||| |||    
T  20936503 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattccttgaataaagtaaatgattcagattta 20936404  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20936403 tgtttcattagatacacatatccaaatctactaaagtcatcagtgaatgtaatgaag 20936347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 26764132 - 26763994
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||||||| | || || ||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  26764132 tcaaaatgaaagatgatgaaagcattga-gcaaatgtactcaagatttcagactctagtttctggactttaaatactgaagaaaagctatgtagcttctg 26764034  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || ||||||||||||||||||||    
T  26764033 atcatgtgagcaagatacttagaagcttacctgctagatg 26763994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 21200481 - 21200619
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| |||||| |||||||||| ||| ||   | ||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  21200481 tcaaaatgaaatatgatgaaagtattgaacaaatgtactcaagatttcagactctagtttctagacttcaaatactgaagaaaagctatgtagcttctga 21200580  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| |||  |||||||||| |||||||    
T  21200581 tcatgtgagcaagatactataaagcttacctactagatg 21200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 31144781 - 31144911
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  31144781 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcaaactctagtttctggacttcaaatactgaagaaaagttctgtagcttctg 31144879  T
Q  131 attgtgtgaacaagattctaagaagcttacct 162  Q
    ||  ||||| |||||| || |||||| |||||    
T  31144880 atcatgtgagcaagatactcagaagcctacct 31144911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 13532650 - 13532524
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  13532650 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 13532551  T
Q  132 ttgtgtgaacaagattctaagaagctt 158  Q
    |  ||| | ||||||||| ||||||||    
T  13532550 tcatgtaagcaagattctgagaagctt 13532524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17456095 - 17455957
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  |||||||    
T  17456095 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctga 17455996  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||| |||||||||||||||||| |||||||    
T  17455995 tcatgttagcaaaattctaagaagcttaccttctagatg 17455957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23487276 - 23487138
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  23487276 tcaagatgaaggatgatgagagtatagaagaaatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 23487177  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  |||||  |||||| | |||||||| ||| |||||||    
T  23487176 tcatgtgagtaagattttgagaagcttgccttctagatg 23487138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 25113377 - 25113515
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||| |||||||| || ||  ||| || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  25113377 tcaaaatgaaggatgatgagagtatagaagagatgtactcaagatttcaaactttagtatctggactacaaatactgaagaagagttatgttgcttctga 25113476  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| ||||||  | |||||||| ||| |||||||    
T  25113477 tcatgtgagcaagatattgagaagcttgccttctagatg 25113515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 25172468 - 25172606
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||| |||||||| || ||  ||| || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  25172468 tcaaaatgaaggatgatgagagtatagaagagatgtactcaagatttcaaactttagtatctggactacaaatactgaagaagagttatgttgcttctga 25172567  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| ||||||  | |||||||| ||| |||||||    
T  25172568 tcatgtgagcaagatattgagaagcttgccttctagatg 25172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 19465485 - 19465589
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| ||| || | ||||||||||||||||||||||| |||||||||  ||| | ||||||||| ||||| |||||| ||    
T  19465485 gtactcaagatttcaaactttagtttctagattgcaaatactgaagaaaagttatgttgcttctgatcatgtaagcaagattctgagaagtttaccttct 19465584  T
Q  166 agatg 170  Q
    |||||    
T  19465585 agatg 19465589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 21704712 - 21704608
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| | ||||||||| |||||||| ||| ||    
T  21704712 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgatcatgttagcaagattctgagaagcttgccttct 21704613  T
Q  166 agatg 170  Q
    |||||    
T  21704612 agatg 21704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 26783061 - 26782958
Alignment:
Q  67 tactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgcta 166  Q
    |||||||| ||||| ||||||    |||||||||||||||| | |||||| |||||||| ||||||   |||| |||||| ||||||||||||||||| |    
T  26783061 tactcaagatttcaaactctaagtactggacttcaaatactaatgaaaagctatgtagcctctgatcaagtgagcaagatactaagaagcttacctgcaa 26782962  T
Q  167 gatg 170  Q
    ||||    
T  26782961 gatg 26782958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 20553294 - 20553432
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||| |||    
T  20553294 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactacaaatactgaagaagagctatgttacttttga 20553393  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  20553394 tcatgttagcaagattctcagaagcttgccttctagatg 20553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 6977290 - 6977415
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  6977290 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 6977389  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  6977390 ttagtaagattttgagaagcttacct 6977415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 22677600 - 22677725
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  22677600 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 22677699  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  22677700 ttagtaagattttgagaagcttacct 22677725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 23297761 - 23297886
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  23297761 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 23297860  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  23297861 ttagtaagattttgagaagcttacct 23297886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 39500264 - 39500139
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  39500264 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 39500165  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  39500164 ttagtaagattttgagaagcttacct 39500139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 9337467 - 9337563
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  9337467 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 9337563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 14031555 - 14031651
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  14031555 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 14031651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 23363609 - 23363705
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  23363609 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 23363705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 23393922 - 23394026
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  23393922 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgatcatgttagtaagattctgagaagcttgccttct 23394021  T
Q  166 agatg 170  Q
    |||||    
T  23394022 agatg 23394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 23698293 - 23698389
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  23698293 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 23698389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 30236774 - 30236678
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  30236774 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 30236678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 31834993 - 31835089
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  31834993 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 31835089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 36591865 - 36591769
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  36591865 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 36591769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 39354009 - 39354105
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  39354009 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 39354105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 40391871 - 40391967
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  40391871 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 40391967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 1120650 - 1120584
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  1120650 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 1120584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 5299890 - 5299824
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  5299890 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 5299824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 27621520 - 27621454
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  27621520 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 27621454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 34773422 - 34773488
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  34773422 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 34773488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 42044293 - 42044359
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  42044293 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 42044359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 14567401 - 14567305
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  14567401 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 14567305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 15741482 - 15741578
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  15741482 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 15741578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 17608575 - 17608671
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  17608575 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 17608671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 17720431 - 17720527
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  17720431 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 17720527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 22148029 - 22148125
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| | |||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  22148029 gtactcaagatttcaaactttagtttttggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 22148125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 24568601 - 24568697
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  24568601 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 24568697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 24826223 - 24826127
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  24826223 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 24826127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 27051585 - 27051489
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  27051585 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 27051489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 27461675 - 27461771
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| || ||||||  ||| |  |||||| | ||||||||||||    
T  27461675 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcctctgatcatgttagtaagattttgagaagcttacct 27461771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 31350047 - 31350143
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  31350047 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 31350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 35217016 - 35217112
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  35217016 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 35217112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 36689211 - 36689307
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  36689211 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 36689307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 43620642 - 43620538
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| ||| || | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||| ||| ||    
T  43620642 gtactcaagatttcaaactttagtttctagattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttgccttct 43620543  T
Q  166 agatg 170  Q
    |||||    
T  43620542 agatg 43620538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 14456360 - 14456294
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  14456360 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 14456294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 16002644 - 16002578
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||  ||||| |||||||||    
T  16002644 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaaactatgttgcttctgat 16002578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 24809429 - 24809495
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  24809429 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 24809495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 37739315 - 37739249
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  37739315 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 37739249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 24982158 - 24982054
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    |||||| || ||||| ||| |||| || ||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  24982158 gtactctagatttcaaactttagtatccggactgcaaatactgaagaagagctatgtcacttctgatcatgttagtaagattctgagaagcttgccttct 24982059  T
Q  166 agatg 170  Q
    |||||    
T  24982058 agatg 24982054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 8e-43; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 171 - 327
Target Start/End: Original strand, 27521320 - 27521476
Alignment:
Q  171 ttctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagactta 270  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| | || ||| ||   |||| ||| ||| |||    
T  27521320 ttctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaattctttgaagaaagtaaatgattcagattta 27521419  T
Q  271 tgtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||    
T  27521420 tgtttcattagatacacatatccaaatctactaaagtcatcggtgagtgtaatgaag 27521476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 19874542 - 19874411
Alignment:
Q  38 tgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgt 137  Q
    |||||||||||||||| ||||| || | ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| | |||||||||  |||    
T  19874542 tgaaagatgatgaaagtattaaggctatgtactcaagatttcagactctagtctatggacttcaaatattgaagaaaagttatattgcttctgataatgt 19874443  T
Q  138 gaacaagattctaagaagcttacctgctagat 169  Q
    ||  |||||| | |||| ||||||||||||||    
T  19874442 gagaaagattttgagaatcttacctgctagat 19874411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17926457 - 17926319
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||| ||| | |  | ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17926457 tcaagatgaaggatgatgaaagtattgaggaaatgtactcaagatttcagaccctagtctctggacttcaaatactgaagaaaagttatgttgcttctga 17926358  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  | ||| ||||||  | ||||| || |||||||||||    
T  17926357 tcatttgagcaagatattgagaagttttcctgctagatg 17926319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 13137903 - 13137986
Alignment:
Q  84 tctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctag 167  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||  ||||| |||||||||||||||||||||||||||    
T  13137903 tctagtctctggacttcaattactgaagaaaagttatgcagtttctgatcatgtgagcaagattctaagaagcttacctgctag 13137986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17063056 - 17062918
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||  |||| |||||||||||||||||||||||||||||||| ||||||||    
T  17063056 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaaccttagtatctggacttcaaatactgaagaaaagttatgttgcttctga 17062957  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| ||||||||| |||||||| ||| |||||||    
T  17062956 tcatgtgagcaagattctgagaagcttgccttctagatg 17062918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 17447120 - 17447258
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||| |||| |||| ||||| ||| | || | ||||||||| ||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  17447120 tcaagaagaaaaatgacgaaagtattgaggctatgtactcaagatttcagactatagtctctggacttcaaatatggaagaaaagttatgtagcttctta 17447219  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  |||||  |||||| | | ||||||||||||||||||    
T  17447220 tcatgtgagtaagattatgataagcttacctgctagatg 17447258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 17609960 - 17610098
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  17609960 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 17610059  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  17610060 tcatgtaagcaagattctgagaagcttgccttctagatg 17610098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 22307628 - 22307528
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| ||||||||||||||||||||||| ||||||||    
T  22307628 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaaaagttatgttgcttctga 22307529  T
Q  132 t 132  Q
    |    
T  22307528 t 22307528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 26941043 - 26940939
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| | || |||||||||||||||||| |  ||||||||||  |||  | ||| ||||||  |||||||||||||||||    
T  26941043 gtactcaagatttcagactctagtttatgaacttcaaatactgaagaacaagtatgtagctttagatcatttgagcaagatattaagaagcttacctgct 26940944  T
Q  166 agatg 170  Q
    |||||    
T  26940943 agatg 26940939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 11204799 - 11204669
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| || | |||||||| |||||||||||||| |||||||| ||||||||    
T  11204799 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttaatatctggactgcaaatactgaagaagagttatgttgcttctga 11204700  T
Q  132 ttgtgtgaacaagattctaagaagcttacct 162  Q
    |  ||| | ||||||| | ||||||||||||    
T  11204699 tcatgtaagcaagattttgagaagcttacct 11204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 18554124 - 18553986
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||| | |||||||||||||| |||||||| ||||||||    
T  18554124 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggaatgcaaatactgaagaagagttatgttgcttctga 18554025  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||| | |||||||| ||| |||||||    
T  18554024 tcatgtaagcaagattatgagaagcttgccttctagatg 18553986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 19448684 - 19448610
Alignment:
Q  96 acttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||||||||||||||||| | | ||||| |||||||||  ||||| |||||| |||||||||||||||||||||||    
T  19448684 acttcaaatactgaagatacgctatgtcgcttctgatcatgtgagcaagatactaagaagcttacctgctagatg 19448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 19450678 - 19450604
Alignment:
Q  96 acttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||||||||||||||||| | | ||||| |||||||||  ||||| |||||| |||||||||||||||||||||||    
T  19450678 acttcaaatactgaagatacgctatgtcgcttctgatcatgtgagcaagatactaagaagcttacctgctagatg 19450604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 22385443 - 22385305
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| | |||||| || ||  ||| || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  22385443 tcaagatgaagggtgatgagagtatagaagagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 22385344  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  |||||  |||||  | |||||||| ||| |||||||    
T  22385343 tcatgtgagaaagatattgagaagcttgccttctagatg 22385305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 12864332 - 12864236
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  12864332 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 12864236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 20031321 - 20031425
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | |||||||| ||| ||    
T  20031321 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttgccttct 20031420  T
Q  166 agatg 170  Q
    |||||    
T  20031421 agatg 20031425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 25984878 - 25984782
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  25984878 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 25984782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 26874203 - 26874107
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  26874203 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 26874107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 32963346 - 32963442
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  32963346 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 32963442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 34808562 - 34808658
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  34808562 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 34808658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 9113893 - 9113959
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  9113893 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 9113959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 27383567 - 27383442
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| | || |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  27383567 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttggtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 27383468  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  27383467 tcagtaagattttgagaagcttacct 27383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 27473951 - 27473826
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| | || |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  27473951 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttggtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 27473852  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  27473851 tcagtaagattttgagaagcttacct 27473826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 27503134 - 27503009
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||||| ||||| ||| |||| |||||| | ||||| ||||||||||| ||||| |||||||||  ||    
T  27503134 atgaaggatgatgagagtattgaagaaatgtactcaagatttcaaactttagtttctggattgcaaattctgaagaaaagctatgttgcttctgatcatg 27503035  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  27503034 tcagtaagattttgagaagcttacct 27503009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 3670845 - 3670749
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | |||||||| |||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  3670845 gtactcaagatttcaaactttagtttctggattgcaaatactaaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 3670749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 14054794 - 14054898
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||||||| | ||  |||||||| |||| ||||||||||| || |||||||| |||||||||  ||| | ||| ||| | |||||||| ||| ||    
T  14054794 gtactcaaggttttaaaccttagtctctagactacaaatactgaaaaagagttatgttgcttctgatcatgtcagcaaaattttgagaagcttgccttct 14054893  T
Q  166 agatg 170  Q
    |||||    
T  14054894 agatg 14054898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 25804469 - 25804365
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||  |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  25804469 gtactcaagatttcaaaccttagtatctggactgcaaatactgaagaagagctatgtcacttctgatcatgttagtaagattctgagaagcttgccttct 25804370  T
Q  166 agatg 170  Q
    |||||    
T  25804369 agatg 25804365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 26034821 - 26034725
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  26034821 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 26034725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 27351146 - 27351050
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  27351146 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 27351050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 27411886 - 27411790
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  27411886 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 27411790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 32302446 - 32302542
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  32302446 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 32302542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 21997035 - 21996976
Alignment:
Q  172 tctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttca 231  Q
    |||| |||||||||| || ||| |||||| || ||||| |||||||||||||||||||||    
T  21997035 tctctacctcgatcaaatcgaatcatttttattttctttcctagttggttttctacttca 21996976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 12718236 - 12718302
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  12718236 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 12718302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 16958409 - 16958343
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  16958409 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 16958343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 26043025 - 26042900
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    ||||| |||||||| || ||| |||  | ||||||| | ||||| ||| | || |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  26043025 atgaaggatgatgagagtattgaagaaatgtactcaggatttcaaactttggtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 26042926  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  26042925 tcagtaagattttgagaagcttacct 26042900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 9345447 - 9345312
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||||||| | || | ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |    
T  9345447 tcaagatgaatgatgatgaaagcattgaggctatgtactcaaggtttcagaccatagtctctggacttcagatactgaagaaaagttatgtagcttctca 9345348  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
       ||||||||||||||||||||||||||||||| ||||    
T  9345347 ---tgtgaacaagattctaagaagcttacctgcttgatg 9345312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 172 - 327
Target Start/End: Original strand, 28137559 - 28137714
Alignment:
Q  172 tctccacctcgatcagattgaagcattttgatattcttgcctagttggttttctacttcattctgaaacttttggaacaattcaaattatttagacttat 271  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  | ||| ||    | | ||| ||| ||||    
T  28137559 tctccacctcgatcagatcgaagcattttgattttcttgcctagttggttttctacttcattttgaaactacttgaataaagatagtgattcagatttat 28137658  T
Q  272 gtttcattagatacacatatccaaatctactaaaatcatgagtgaatgtaatgaag 327  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||    
T  28137659 gtttcattagatacacatatccaaatctactaaagtcatcagtgaacctaatgaag 28137714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 21125784 - 21125922
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21125784 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactgaagatttcagactctagtttctggacttcaaatactgaagaaaagttatgtagcttctg 21125882  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || |||||| |||||||||||||    
T  21125883 atcatgtgagcaagatacttagaagcctacctgctagatg 21125922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 21207233 - 21207371
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  21207233 tcaaaatgaaagatgatgaaagtattga-gcaaatgtattcaagatttcagactctagtttctggacttcaaatactgaagaaaagatatgtagcttctg 21207331  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || | |||| |||||||||||||    
T  21207332 atcatgtgagcaagatactcataagcctacctgctagatg 21207371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 20943394 - 20943290
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| || | | ||||||||  ||||| |||||| |||||||||||||||||     
T  20943394 gtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctaagaaacttctgatcatgtgagcaagatactaagaagcttacctgca 20943295  T
Q  166 agatg 170  Q
    |||||    
T  20943294 agatg 20943290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 25449677 - 25449803
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  25449677 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcaaactctagtttctggacttcaaatactgaagaaaagctatgtagcctctg 25449775  T
Q  131 attgtgtgaacaagattctaagaagctt 158  Q
    ||  ||||| ||||||||| ||||||||    
T  25449776 atcatgtgagcaagattctgagaagctt 25449803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 27857426 - 27857342
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgt-agcttctgattgtgtgaacaagattct 149  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| || |||||||| |||||||||||||||    
T  27857426 gtactcaaggtttcagactctagtctctggacttcaggttctgaagaaaagttatgtaagtttctgattatgtgaacaagattct 27857342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23023540 - 23023402
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| ||||| |||||||| || ||| ||||||||||||||||||| |||||||||||||    
T  23023540 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcaaactctagtttcaggaattcaaatactgaagaaaagctatgtagcttctg 23023442  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||| | |||||| || |||||||||||| |||||||    
T  23023441 atcatgtaagcaagatactcagaagcttacctactagatg 23023402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 21196113 - 21196251
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| |||||||||| |||||| ||| | |  | ||||||||| ||| ||||||||||  ||||||||||||||||||||||| | |||||||||| |||    
T  21196113 tcaaaatgaaagatgttgaaagtattgaggaaatgtactcaagattttagactctagttcctggacttcaaatactgaagaaatgctatgtagcttttga 21196212  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |   |||| |||||| ||||||| ||||||| |||||||    
T  21196213 tcacgtgagcaagatactaagaaacttaccttctagatg 21196251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 22431418 - 22431522
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||| ||||||||||  |||||||| |||||||||||||||| |||||||| ||||||  ||||| |||||  || ||||||||||||||     
T  22431418 gtactcaagattttagactctagttcctggactttaaatactgaagaaaagctatgtagcctctgatcatgtgagcaagagacttagaagcttacctgca 22431517  T
Q  166 agatg 170  Q
    |||||    
T  22431518 agatg 22431522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 23975896 - 23975996
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||| |||||||||||||||| | ||||||||| || ||||||||||| |||||||||||||||   ||||| || |||||||| ||||| ||||||    
T  23975896 gtactcagggtttcagactctagtgtatggacttcagattctgaagaaaagctatgtagcttctgatcacgtgaagaatattctaaggagcttgcctgct 23975995  T
Q  166 a 166  Q
    |    
T  23975996 a 23975996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 51630595 - 51630720
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||    
T  51630595 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatg 51630694  T
Q  137 tgaacaagattctaagaagcttacct 162  Q
    | |  |||||| | ||||||||||||    
T  51630695 ttagtaagattttgagaagcttacct 51630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 4176691 - 4176595
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  4176691 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 4176595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 12615755 - 12615851
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  12615755 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 12615851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 12739917 - 12739821
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  12739917 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 12739821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 20874657 - 20874745
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaa 154  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| ||| |||| |||||||||  ||| | ||||||||| ||||    
T  20874657 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagtcatgttgcttctgatcatgtaagcaagattctgagaa 20874745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 21876537 - 21876441
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  21876537 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 21876441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 35639471 - 35639567
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  35639471 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 35639567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 36237862 - 36237958
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  36237862 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 36237958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 7516702 - 7516607
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    |||||||||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  7516702 atgaaagatgatgagagtatagaagaaatgtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 7516607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 22958755 - 22958640
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||||  |||| || | | ||||||||||||| ||| |||||| |||| |||||| || |  |||||||| ||||||| | |||||  ||    
T  22958755 atgaaagatgatgaagacattgaaactatgtactcaaggtttaagaatctagtttctgaacttcagattcaaaagaaaagctatgtagttgctgatcatg 22958656  T
Q  137 tgaacaagattctaag 152  Q
    |||| |||||||||||    
T  22958655 tgaagaagattctaag 22958640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 19186594 - 19186528
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  19186594 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 19186528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 7690903 - 7690968
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| ||||||||    
T  7690903 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctga 7690968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 3180990 - 3180894
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  3180990 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 3180894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 5641142 - 5641238
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | |||||||| |||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  5641142 gtactcaagatttcaaactttagtttctggattgcaaatactaaagaaaagctatgttgcttctgatcatgtcagtaagattttgagaagcttacct 5641238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 5842593 - 5842497
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    ||||||||| ||||| ||| |||| |||||| | || |||||||||||||| ||||| |||||||||  ||| |  |||||| | ||||||||||||    
T  5842593 gtactcaagatttcaaactttagtttctggattgcagatactgaagaaaagctatgttgcttctgatcatgttagtaagattttgagaagcttacct 5842497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 38093848 - 38093782
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  38093848 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 38093782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 38104474 - 38104408
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  38104474 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 38104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 47609368 - 47609434
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  47609368 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 47609434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 7320 - 7190
Alignment:
Q  40 aaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtga 139  Q
    |||||||||||||| ||| | |  | ||||||||| |||||||||||||| | |||||||||||||||||||||||| |||||||||||||||  |||||    
T  7320 aaagatgatgaaagtattgaggaaatgtactcaagatttcagactctagtttttggacttcaaatactgaagaaaagctatgtagcttctgatcctgtga 7221  T
Q  140 acaagattctaagaagcttacctgctagatg 170  Q
     |||||| |||||||||||||||||||||||    
T  7220 gcaagatactaagaagcttacctgctagatg 7190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 34336 - 34402
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||    
T  34336 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgat 34402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 27084 - 27222
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27084 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagttatgtagattctg 27182  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    ||  ||||| |||||| || |||||| |||||||||||||    
T  27183 atcatgtgagcaagatactcagaagcctacctgctagatg 27222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 111069 - 111173
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| | |||||||||||||||||||||||  |||||||||||||||  |||||||||||| || |||||||||||||||    
T  111069 gtactcaagatttcagactctagtttatggacttcaaatactgaagaaaatctatgtagcttctgatcatgtgaacaagatacttagaagcttacctgct 111168  T
Q  166 agatg 170  Q
    |||||    
T  111169 agatg 111173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 6888 - 6986
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgc 164  Q
    |||||||||| |||||||||  |||||| ||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6888 gtactcaagggttcagactccggtctcttgacttcagattctgaaggaaagttatgtagcttctgattatgtgaacaagattctaagaagcttacctgc 6986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 1869 - 1736
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgt 135  Q
    ||||||||||||||||| ||| | || || ||||||||| |||||||||||||| |||||||||||||||| |||||| || |||||||||||||||  |    
T  1869 atgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactctagtttctggacttcaaataccgaagaagagctatgtagcttctgatcat 1771  T
Q  136 gtgaacaagattctaagaagcttacctgctagatg 170  Q
    |||| |||||| ||||||||||||||||| |||||    
T  1770 gtgagcaagatactaagaagcttacctgcaagatg 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 210076 - 209942
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||||||| | || || ||||||||| |||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  210076 tcaaaatgaaagatgatgaaagcattga-gcaaatgtactcaagatttcaggctctagtttctggacttcaaatactga-gaaaagctatgtagcttctg 209979  T
Q  131 attgtgtgaacaagattctaagaagcttacctgctag 167  Q
    ||  ||||| |||||| || |||||||||||||||||    
T  209978 atcatgtgagcaagatacttagaagcttacctgctag 209942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 3e-27; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 36107 - 35969
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||||||| ||| |    | ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||    
T  36107 tcaaaatgaaagatgatgaaagtattgagaaaatgtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctatgcagcctctga 36008  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| || |||||||||||||| |||||    
T  36007 tcttgtgagcaagatactgagaagcttacctgcaagatg 35969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 134167 - 134029
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||| ||||||||||||||||| ||| |    | ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||    
T  134167 tcaaaatgaaagatgatgaaagtattgagaaaatgtactcaagatttcagactctagtttctggacttcaaatactgaagaaaagctatgcagcctctga 134068  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||||| |||||| || |||||||||||||| |||||    
T  134067 tcttgtgagcaagatactgagaagcttacctgcaagatg 134029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 157775 - 157671
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| |||||||| ||||||||| ||||||| |||||||| |||||||||| ||||  ||||| |||||| ||||||||||||||||||    
T  157775 gtactcaagatttcacactctagtttctggacttgaaatactaaagaaaagctatgtagcttttgatcatgtgagcaagatactaagaagcttacctgct 157676  T
Q  166 agatg 170  Q
    |||||    
T  157675 agatg 157671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 45188 - 45254
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| ||||| |||||||||    
T  45188 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgttgcttctgat 45254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 2990 - 2890
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||||| || ||||  |||||||||||||||||| ||||||| ||||    
T  2990 gtacttaaggttttagactctagtatctggactttaaatactgaagaaaagttatgtagtttttgatcatgtgaacaagattctaaggagcttacgtgct 2891  T
Q  166 a 166  Q
    |    
T  2890 a 2890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 9532 - 9404
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||||||||||||| | ||| | |  | ||||||||| | |||||||||||||||||||||||||||| | |||||||||||  |||||| |||    
T  9532 tcaagatgaaagatgatgaatgtattgaggaaatgtactcaagatatcagactctagtctctggacttcaaatattaaagaaaagttacctagcttatga 9433  T
Q  132 ttgtgtgaacaagattctaagaagcttac 160  Q
    |  ||||||||||||| ||||||||||||    
T  9432 tcatgtgaacaagattataagaagcttac 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 75927 - 75798
Alignment:
Q  41 aagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaa 140  Q
    ||||||||||||| |||||    | ||||||| | |||||||||||||||||| |||||||||||||||||||||  ||||| |||| ||||  ||||||    
T  75927 aagatgatgaaagtattaagtaaatgtactcatgatttcagactctagtctcttgacttcaaatactgaagaaaatctatgttgcttatgatcatgtgaa 75828  T
Q  141 caagattctaagaagcttacctgctagatg 170  Q
    ||||||||| | ||||||||||||| ||||    
T  75827 caagattctgataagcttacctgcttgatg 75798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 47953 - 47849
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||| ||| ||| |||||||||| ||||||||||||||| |||||||||| |||||||||||||||  ||||| |||||| |||||||| ||||||||     
T  47953 gtacttaagatttaagactctagtttctggacttcaaatattgaagaaaagctatgtagcttctgatcatgtgagcaagatactaagaagtttacctgca 47854  T
Q  166 agatg 170  Q
    |||||    
T  47853 agatg 47849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 3182 - 3282
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||||||||| |||||||||| ||||||||| ||  |||||||||| |||||||||| ||||  ||||||||||||||||||||| |||| ||||    
T  3182 gtactcaaggtttcaaactctagtctttggacttcagattttgaagaaaagctatgtagcttatgatcatgtgaacaagattctaagaagtttacttgct 3281  T
Q  166 a 166  Q
    |    
T  3282 a 3282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 1660 - 1764
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| |||||||||||||| | || |||||||||||||||||| || |||||||||||||||  |||||  ||||| || |||||||||| ||||    
T  1660 gtactcaagatttcagactctagtttttgaacttcaaatactgaagaagagctatgtagcttctgatcatgtgagtaagatactgagaagcttacttgct 1759  T
Q  166 agatg 170  Q
    |||||    
T  1760 agatg 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 7338 - 7209
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaa-gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctg 130  Q
    |||| ||||||||||||||||| ||| | || || ||||||||| |||||||||| ||| ||||||| ||||||||| |||||||| |||||||||||||    
T  7338 tcaaaatgaaagatgatgaaagtattga-gcaaatgtactcaagatttcagactc-agtttctggacgtcaaatactaaagaaaagctatgtagcttctg 7241  T
Q  131 attgtgtgaacaagattctaagaagcttacct 162  Q
    ||  ||||| |||||| |||||||| ||||||    
T  7240 atcatgtgagcaagatactaagaagtttacct 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 4155 - 4017
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  4155 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 4056  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  4055 tcatgtaagcaagattctgagaagcttgccttctagatg 4017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 298 - 162
Alignment:
Q  34 aagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgatt 133  Q
    |||||||| |||||||| || ||  ||| || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||||||||     
T  298 aagatgaaggatgatgagagtatagaagagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctgatc 199  T
Q  134 gtgtgaacaagattctaagaagcttacctgctagatg 170  Q
     ||||| ||||||  | |||||||| ||| |||||||    
T  198 atgtgagcaagatattgagaagcttgccttctagatg 162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 2444 - 2536
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagctt 158  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||||||||  ||||| ||||||||| ||||||||    
T  2444 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctgatcatgtgagcaagattctgagaagctt 2536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 2723 - 2827
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| |||||| ||  ||||| ||||||||| |||||||| ||| ||    
T  2723 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctaatcatgtgagcaagattctgagaagcttgccttct 2822  T
Q  166 agatg 170  Q
    |||||    
T  2823 agatg 2827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 779 - 917
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  | | || ||||||||| ||||| ||| |||| |||||||| ||||||||||| || ||||||||  |||||||    
T  779 tcaagatgaaggatgatgagagtatagaggagatgtactcaagatttcaaactttagtatctggactgcaaatactgaataagagttatgtttcttctga 878  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| | ||||||||| |||||||| ||| |||||||    
T  879 tcatgtaagcaagattctgagaagcttgccttctagatg 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0925 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 3626 - 3764
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| | |||||| || ||  ||| || ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  3626 tcaagatgaagggtgatgagagtatagaagagatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 3725  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  |||||  |||||  | |||||||| ||| |||||||    
T  3726 tcatgtgagaaagatattgagaagcttgccttctagatg 3764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 22372 - 22510
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||  ||| | |  | ||||||||||||||| |  |||||||||||||| ||||||||||||||  ||||||| | || |||    
T  22372 tcaagatgaaggatgatgaaactattgaggaaatgtactcaaggtttcaaatcctagtctctggactacaaatactgaagaagtgttatgttgtttatga 22471  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  | | | |||||| ||||||||||| |||||||||||    
T  22472 tcatcttagcaagatactaagaagcttgcctgctagatg 22510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 9198 - 9302
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| | ||||||||| |||||||| ||| ||    
T  9198 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgttacttctgatcatgttagcaagattctgagaagcttgccttct 9297  T
Q  166 agatg 170  Q
    |||||    
T  9298 agatg 9302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 166101 - 166201
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| |||||||| || ||  |||  | ||||||||| ||||| ||| |||| |||||||| |||||||||||||| |||||||| ||||||||    
T  166101 tcaagatgaaggatgatgagagtatagaagaaatgtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagttatgttgcttctga 166200  T
Q  132 t 132  Q
    |    
T  166201 t 166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 11505 - 11643
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||  ||| | | || |||||||| |||||| || ||||| |||||||| ||||||| |||||| |||||  | |||| |||    
T  11505 tcaagatgaaggatgatgaaactattgaggagatgtactcaacgtttcaaaccctagtgtctggactacaaataccgaagaagagttactttgcttatga 11604  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| |||||||| ||||| | ||| |||||||||||    
T  11605 tcatgttaacaagatactaaggatcttgcctgctagatg 11643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 16178 - 16316
Alignment:
Q  32 tcaagatgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctga 131  Q
    |||||||||| ||||||||||  ||| | | || |||||||| |||||| || ||||| |||||||| ||||||| |||||| |||||  | |||| |||    
T  16178 tcaagatgaaggatgatgaaactattgaggagatgtactcaacgtttcaaaccctagtgtctggactacaaataccgaagaagagttactttgcttatga 16277  T
Q  132 ttgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |  ||| |||||||| ||||| | ||| |||||||||||    
T  16278 tcatgttaacaagatactaaggatcttgcctgctagatg 16316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 190440 - 190566
Alignment:
Q  37 atgaaagatgatgaaagcattaaagcgaagtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtg 136  Q
    |||||||||||||||  |||| || | | ||||||||||||| ||| |||||| |||| |||||| || |  |||||||| ||||||| | |||||  ||    
T  190440 atgaaagatgatgaagacattgaaactatgtactcaaggtttaagaatctagtttctgaacttcagattcaaaagaaaagctatgtagttgctgatcatg 190539  T
Q  137 tgaacaagattctaagaagcttacctg 163  Q
    |||| ||||||||||| || |||||||    
T  190540 tgaagaagattctaaggagtttacctg 190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 24071 - 23967
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgct 165  Q
    ||||||||| ||||| ||| |||| |||||||| |||||||||||||| || |||||  ||||||||  ||| |  |||||||| |||||||| ||| ||    
T  24071 gtactcaagatttcaaactttagtatctggactgcaaatactgaagaagagctatgtcacttctgatcatgttagtaagattctgagaagcttgccttct 23972  T
Q  166 agatg 170  Q
    |||||    
T  23971 agatg 23967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 982 - 1081
Alignment:
Q  71 caaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacctgctagatg 170  Q
    |||| ||||| ||| |||| |||||||| |||||||||||||| ||||||||||| ||||||  |||||  |||||  | |||||||| ||| |||||||    
T  982 caagatttcaaactttagtatctggactgcaaatactgaagaagagttatgtagcgtctgatcatgtgagtaagatattgagaagcttgccttctagatg 1081  T

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Target: scaffold0359 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 7191 - 7250
Alignment:
Q  103 atactgaagaaaagttatgtagcttctgattgtgtgaacaagattctaagaagcttacct 162  Q
    |||||||||||||| |||||||||||||||  ||||| |||||| || |||| |||||||    
T  7191 atactgaagaaaagctatgtagcttctgatcatgtgagcaagatacttagaaacttacct 7250  T

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Target: scaffold0105 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 38388 - 38454
Alignment:
Q  66 gtactcaaggtttcagactctagtctctggacttcaaatactgaagaaaagttatgtagcttctgat 132  Q
    ||||||||| ||||| ||| |||| |||||| | ||||||||||||||||| |||||  ||||||||    
T  38388 gtactcaagatttcaaactttagtttctggattgcaaatactgaagaaaagctatgtttcttctgat 38454  T

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