View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18151_high_12 (Length: 307)
Name: NF18151_high_12
Description: NF18151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18151_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 285
Target Start/End: Original strand, 30514301 - 30514570
Alignment:
| Q |
18 |
atctctgatcaaactcactgttatcttcctcgtcacacattatttatatatgtttgttacgattaattaggacaaaatcacattactttattttata--t |
115 |
Q |
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| T |
30514301 |
atctctgatcaaactcaccgttatcttcctcgtcacacattatttatatatgtttgttacgattaattaggacaaaatcacattactttattttatatat |
30514400 |
T |
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| Q |
116 |
actaaagtaaagtaaagtaaagggattattattttagtataattcaatttgtctccaaattaactgaagtggaagacataaatgttaattttatattttt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30514401 |
actaaagtaaagtaaagtaaagggattattattttagtataattcaatttgtctccaaattaactgaagtggaagacataaatgttaattttatattttt |
30514500 |
T |
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| Q |
216 |
tgtcagggggagggtacggttctagttactgaatggttaatagtaagctaaaatcgtgggaatcgtttca |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30514501 |
tgtcagggggagggtacggttctagttactgaatggttaatagtaagctaaaatcgtgggaatcgtttca |
30514570 |
T |
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