View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18151_high_18 (Length: 245)
Name: NF18151_high_18
Description: NF18151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18151_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 51805859 - 51806076
Alignment:
| Q |
13 |
acagacatgggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatattttaaagacgagaaatcaggaagtgttcctgacaggtgca |
112 |
Q |
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| T |
51805859 |
acagacatgggaaaatcgccggtgaaggagttgtatgataagtcgaggactctgagatattttaaagacgagaaatcaggaagtgttcctgacaggtgca |
51805958 |
T |
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| Q |
113 |
tcttgttcatgttgagttgttctaagtgagaacagttgattatgctgtttgttgggaacttgaattttgtattaccgaggtttaggacacgtaaatttgg |
212 |
Q |
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| T |
51805959 |
tcttgttcatgttgagtagttctaagtgagaacagttgattatgctgtttgttgggaacttgaattttgtattaccgaggtttaggacacgtaaatttgg |
51806058 |
T |
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| Q |
213 |
aaggtaagagcaaatatt |
230 |
Q |
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| T |
51806059 |
aaggtaagagcaaatatt |
51806076 |
T |
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