View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18151_low_1 (Length: 845)

Name: NF18151_low_1
Description: NF18151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18151_low_1
NF18151_low_1
[»] chr5 (33 HSPs)
chr5 (220-753)||(2314211-2314735)
chr5 (14-228)||(2314761-2314975)
chr5 (765-845)||(29046062-29046142)
chr5 (514-576)||(2464857-2464919)
chr5 (516-576)||(18004848-18004908)
chr5 (514-576)||(8074638-8074700)
chr5 (514-576)||(14889957-14890019)
chr5 (514-576)||(25590618-25590680)
chr5 (514-576)||(28589887-28589949)
chr5 (514-576)||(40611448-40611510)
chr5 (514-576)||(40612532-40612594)
chr5 (516-576)||(545909-545969)
chr5 (516-576)||(9537232-9537292)
chr5 (517-572)||(8075710-8075765)
chr5 (517-576)||(34173471-34173530)
chr5 (514-576)||(32640476-32640538)
chr5 (514-576)||(32641600-32641662)
chr5 (516-576)||(2466646-2466706)
chr5 (514-576)||(28590985-28591048)
chr5 (514-576)||(14891020-14891082)
chr5 (351-416)||(2312859-2312924)
chr5 (514-559)||(4593048-4593093)
chr5 (528-576)||(544850-544898)
chr5 (765-805)||(28705857-28705897)
chr5 (525-576)||(4593974-4594025)
chr5 (767-821)||(1896841-1896895)
chr5 (765-810)||(28705198-28705243)
chr5 (516-575)||(19271552-19271612)
chr5 (765-816)||(236200-236251)
chr5 (765-816)||(236319-236370)
chr5 (517-560)||(578641-578684)
chr5 (766-809)||(26874425-26874468)
chr5 (765-810)||(1896233-1896278)
[»] chr7 (44 HSPs)
chr7 (630-753)||(48670451-48670574)
chr7 (514-576)||(7259558-7259620)
chr7 (630-718)||(14309815-14309903)
chr7 (516-576)||(44334323-44334383)
chr7 (514-576)||(7258463-7258525)
chr7 (514-576)||(35728959-35729021)
chr7 (514-576)||(44333325-44333387)
chr7 (524-576)||(45583792-45583844)
chr7 (516-574)||(7509327-7509385)
chr7 (514-576)||(30924882-30924944)
chr7 (514-576)||(45584370-45584431)
chr7 (514-575)||(10898947-10899008)
chr7 (765-810)||(26636136-26636181)
chr7 (514-575)||(48788546-48788607)
chr7 (514-574)||(42478145-42478205)
chr7 (516-575)||(12223553-12223612)
chr7 (514-577)||(43461589-43461652)
chr7 (514-576)||(10894531-10894592)
chr7 (514-576)||(12221489-12221551)
chr7 (791-845)||(21869984-21870038)
chr7 (513-575)||(33607368-33607430)
chr7 (514-572)||(48647320-48647378)
chr7 (514-577)||(43457656-43457718)
chr7 (791-845)||(21870742-21870796)
chr7 (514-576)||(39708317-39708379)
chr7 (753-805)||(24452974-24453026)
chr7 (718-753)||(14305378-14305413)
chr7 (516-575)||(46286713-46286772)
chr7 (514-576)||(48777445-48777507)
chr7 (517-575)||(42477571-42477629)
chr7 (514-567)||(35727886-35727939)
chr7 (514-570)||(19433794-19433850)
chr7 (514-574)||(24934985-24935045)
chr7 (765-809)||(30661430-30661474)
chr7 (765-809)||(37949638-37949682)
chr7 (517-572)||(2677127-2677182)
chr7 (517-576)||(5929982-5930041)
chr7 (765-808)||(19067670-19067713)
chr7 (514-576)||(385503-385564)
chr7 (514-560)||(8048653-8048699)
chr7 (765-803)||(21165268-21165306)
chr7 (765-795)||(26636849-26636879)
chr7 (518-576)||(34707812-34707870)
chr7 (514-555)||(44530511-44530552)
[»] chr8 (17 HSPs)
chr8 (765-845)||(37733538-37733618)
chr8 (514-576)||(1952843-1952905)
chr8 (514-576)||(32898318-32898380)
chr8 (514-575)||(35177582-35177643)
chr8 (765-841)||(41974674-41974750)
chr8 (514-576)||(5737876-5737938)
chr8 (516-576)||(10406396-10406456)
chr8 (516-568)||(41121315-41121367)
chr8 (517-576)||(28619405-28619464)
chr8 (517-576)||(35178678-35178737)
chr8 (516-575)||(41122616-41122675)
chr8 (514-576)||(45476416-45476478)
chr8 (517-576)||(5737052-5737112)
chr8 (755-814)||(22649100-22649159)
chr8 (514-566)||(10407467-10407519)
chr8 (516-576)||(30134776-30134836)
chr8 (514-576)||(39138517-39138579)
[»] chr2 (31 HSPs)
chr2 (673-753)||(1313615-1313695)
chr2 (514-576)||(32765125-32765187)
chr2 (516-576)||(14704195-14704255)
chr2 (514-575)||(43380775-43380836)
chr2 (516-576)||(39016256-39016316)
chr2 (517-576)||(2910291-2910350)
chr2 (514-573)||(21732303-21732362)
chr2 (765-810)||(22559892-22559937)
chr2 (762-841)||(42181898-42181974)
chr2 (520-576)||(31090351-31090407)
chr2 (514-576)||(24458248-24458310)
chr2 (514-576)||(24459327-24459389)
chr2 (521-575)||(33163312-33163366)
chr2 (765-805)||(22560546-22560586)
chr2 (514-573)||(21733627-21733686)
chr2 (517-576)||(40000208-40000267)
chr2 (514-576)||(7412300-7412362)
chr2 (514-568)||(17330100-17330154)
chr2 (514-576)||(39015193-39015255)
chr2 (765-815)||(42182583-42182633)
chr2 (516-576)||(2911360-2911420)
chr2 (516-575)||(43381045-43381104)
chr2 (530-568)||(12010263-12010301)
chr2 (514-576)||(31091400-31091462)
chr2 (522-572)||(31442547-31442597)
chr2 (517-575)||(33161979-33162037)
chr2 (516-576)||(39999140-39999197)
chr2 (517-577)||(7073841-7073902)
chr2 (516-576)||(5914885-5914945)
chr2 (521-575)||(12003782-12003836)
chr2 (514-576)||(39256872-39256936)
[»] chr4 (16 HSPs)
chr4 (514-576)||(42278237-42278299)
chr4 (514-576)||(47874751-47874813)
chr4 (514-575)||(47878358-47878419)
chr4 (514-576)||(20599759-20599821)
chr4 (516-577)||(4703069-4703130)
chr4 (765-810)||(26159595-26159640)
chr4 (517-575)||(19050447-19050505)
chr4 (516-576)||(4701973-4702033)
chr4 (516-575)||(53770944-53771003)
chr4 (514-576)||(38216652-38216714)
chr4 (519-576)||(26170856-26170913)
chr4 (514-575)||(53770501-53770562)
chr4 (765-809)||(5046018-5046062)
chr4 (765-809)||(7841578-7841622)
chr4 (765-815)||(12920243-12920293)
chr4 (528-573)||(56041182-56041227)
[»] chr3 (27 HSPs)
chr3 (514-575)||(55388247-55388308)
chr3 (514-576)||(48808560-48808622)
chr3 (514-576)||(36279140-36279202)
chr3 (514-576)||(52318190-52318252)
chr3 (514-576)||(48574332-48574394)
chr3 (514-576)||(55389342-55389404)
chr3 (753-805)||(41475293-41475345)
chr3 (516-576)||(53958973-53959033)
chr3 (514-569)||(33837351-33837406)
chr3 (517-575)||(17701803-17701861)
chr3 (514-576)||(36280190-36280252)
chr3 (514-576)||(47117945-47118007)
chr3 (519-576)||(53957866-53957923)
chr3 (516-575)||(47075245-47075304)
chr3 (514-576)||(20464277-20464339)
chr3 (514-575)||(17700707-17700768)
chr3 (765-810)||(41474684-41474729)
chr3 (514-575)||(48573173-48573234)
chr3 (514-575)||(48809529-48809590)
chr3 (521-576)||(36827328-36827383)
chr3 (525-575)||(45600833-45600883)
chr3 (765-805)||(981701-981741)
chr3 (521-560)||(3671246-3671285)
chr3 (518-576)||(19115040-19115098)
chr3 (517-571)||(33427922-33427976)
chr3 (516-574)||(40317960-40318018)
chr3 (514-575)||(47428457-47428518)
[»] chr1 (29 HSPs)
chr1 (514-576)||(9339834-9339896)
chr1 (517-576)||(7944346-7944405)
chr1 (514-576)||(32665642-32665705)
chr1 (516-576)||(34088322-34088382)
chr1 (514-576)||(9340898-9340960)
chr1 (519-576)||(6613840-6613897)
chr1 (517-574)||(25038092-25038149)
chr1 (517-574)||(25043304-25043361)
chr1 (517-575)||(6612621-6612679)
chr1 (767-841)||(8988491-8988565)
chr1 (514-576)||(52439649-52439711)
chr1 (516-576)||(52440433-52440493)
chr1 (762-809)||(27257398-27257445)
chr1 (525-575)||(3117868-3117918)
chr1 (765-816)||(8987823-8987875)
chr1 (516-576)||(51453592-51453652)
chr1 (514-576)||(16249851-16249913)
chr1 (514-576)||(26518297-26518359)
chr1 (762-807)||(8549467-8549512)
chr1 (517-574)||(34085733-34085790)
chr1 (527-576)||(39726540-39726589)
chr1 (519-572)||(39977545-39977598)
chr1 (517-569)||(22856889-22856941)
chr1 (516-552)||(23703898-23703934)
chr1 (516-576)||(32664693-32664752)
chr1 (529-576)||(22857432-22857479)
chr1 (765-808)||(34309206-34309249)
chr1 (514-556)||(7945447-7945489)
chr1 (762-807)||(33504106-33504151)
[»] scaffold0767 (2 HSPs)
scaffold0767 (514-576)||(6106-6168)
scaffold0767 (514-573)||(5805-5864)
[»] chr6 (3 HSPs)
chr6 (514-576)||(31239840-31239902)
chr6 (353-410)||(12104130-12104187)
chr6 (350-383)||(7486526-7486559)
[»] scaffold0016 (1 HSPs)
scaffold0016 (514-574)||(36400-36460)
[»] scaffold0085 (1 HSPs)
scaffold0085 (762-805)||(15914-15957)
[»] scaffold0369 (1 HSPs)
scaffold0369 (530-575)||(8723-8768)


Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 220 - 753
Target Start/End: Complemental strand, 2314735 - 2314211
Alignment:
Q  220 aaattgattttgtttttagaatttattcttacttagagccataatttataacttttacctctaccattgannnnnnnnnnnnnnnnngaatatatctatc 319  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||                 ||||||||| |||    
T  2314735 aaattgattttgtttttagaatttattctta----gagccataatttataacttttacctctagcattgattttatttttttgttttgaatatatcaatc 2314640  T
Q  320 aactctctttttcacatgaatatatatatacaaacataaattattttaccttaaactcacttttggctcaattcaattttatagaatcaattcattgttt 419  Q
    ||||||||||  ||||||||||||||||    ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2314639 aactctcttt--cacatgaatatatata----aacataaaccattttaccttaaactcacttttggctcaattcaattttataaaatcaattcattgttt 2314546  T
Q  420 gtacccnnnnnnnn--tcaattcattgaaaattaactttttcgcataaaaaccaaaagcacactaagtgtaccaaaaacgacatatgaattttatttggt 517  Q
     |||||          |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2314545 ctacccaaaaaaaaaatcaattcattgaaaattaactttttcgcgtaaaaaccaaaagcacactaagtgtaccaaaaacgacatatgaattctatttggt 2314446  T
Q  518 cactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatcatctccaatccaaaatcttctatgattcactannnnnnncg 617  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |       ||    
T  2314445 cactttggtccctgaaccaaaatttaatatccccaaattgaatatcaaattcctaaatcatctccaatccaaaatcttctatgattcaccatttttttcg 2314346  T
Q  618 atggnnnnnnnntgaagaatactgggtttgaaaggtaatggttgtttaactgattaggacaaatagtatatgcttatgatgaattgaattttcaaatatt 717  Q
    ||||        |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||||||  |||||||| ||||    
T  2314345 atgg-aaaaaaatgaagaatactgggtttgaaaggtaatggtggtgtaactaattaggacaaatagtatatgcttattatgaattagattttcaattatt 2314247  T
Q  718 attatttttgaagaaggggatattcaattattaaaa 753  Q
    ||||||||||||||||||||||||||||||||||||    
T  2314246 attatttttgaagaaggggatattcaattattaaaa 2314211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 2314975 - 2314761
Alignment:
Q  14 ctatggagatggaacttgttgaattgctcgtcgatatgaagaattttatcaatgcnnnnnnncttagtcaaaagttagtcattactagtaaatggatact 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  2314975 ctatggagatggaacttgttgaattgctcgtcgatatgaagaattttatcaatgctttttttcttagtcaaaagttagtcattactagtaaatggatact 2314876  T
Q  114 attttaggaccttacctttacaaaagttatttttatgtacatttgctaatcacatgtttggttccaccttaatacctagtaaaatagacttttaaaaatt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  2314875 attttaggaccttacctttacaaaagttatttttatgtacatttgctaatcacatgtttggttccactttaatacctagtaaaatagaattttaaaaatt 2314776  T
Q  214 attagcaaattgatt 228  Q
    |||||||||||||||    
T  2314775 attagcaaattgatt 2314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 765 - 845
Target Start/End: Original strand, 29046062 - 29046142
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtatatcc 845  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||    
T  29046062 cgttgacaccaaatctcaacggtacattatatttaatcaaaggctaatattaattttaatgtttatatttcctgtatatcc 29046142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 2464857 - 2464919
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2464857 tggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 2464919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 18004848 - 18004908
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18004848 gtcactttggtccctgaatcaaaattcaatatccccaaattgaatatcaaatccctaaatc 18004908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 8074638 - 8074700
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  8074638 tggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccccaaatc 8074700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 14889957 - 14890019
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||||||    
T  14889957 tggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaattcgctaaatc 14890019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 25590618 - 25590680
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  25590618 tggtcactttggtctctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 25590680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 28589887 - 28589949
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||    
T  28589887 tggtcactttggtccctgaaccaaaaatcaatataccaaaattgaatatcaaatcactaaatc 28589949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 40611448 - 40611510
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  40611448 tggtcacttgggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 40611510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 40612594 - 40612532
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  40612594 tggttactttggtccctgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaatc 40612532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 545969 - 545909
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  545969 gtcactttggtccttgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaatc 545909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 9537232 - 9537292
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  9537232 gtcactttgatccctgaatcaaaaatcaatatccccaaattgaatctcaaatccctaaatc 9537292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 572
Target Start/End: Complemental strand, 8075765 - 8075710
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcccta 572  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  8075765 tcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattccta 8075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 576
Target Start/End: Original strand, 34173471 - 34173530
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  34173471 tcactttggtctctgaaccaaaaatcaatatccccaaattgaatttcaaatcactaaatc 34173530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 32640476 - 32640538
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||| |||||||||| ||||||| || |||||||||||||||| ||||||||    
T  32640476 tggtcactttggtccttgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaatc 32640538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 32641662 - 32641600
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||| |||||| ||||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  32641662 tggttactttgatccctcaaccaaaaatcaatatccccaaattgaatatgaaatccctaaatc 32641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 2466706 - 2466646
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||    
T  2466706 gtcattttggtccctgaaccaaaattcaatattcccaaattgaatatcaaattcttaaatc 2466646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 28591048 - 28590985
Alignment:
Q  514 tggtcactttggtccctgaacc-aaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| | ||||||    
T  28591048 tggtcactttggtccctgaaccaaaaaatcaatattcccaaattgaatatcaaattcttaaatc 28590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 14891082 - 14891020
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| ||||||||| ||||| ||||||| |||||||||||| |||||| ||||||||    
T  14891082 tggtcactttagtccctgaatcaaaaatcaatattcccaaattgaatttcaaattcctaaatc 14891020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 2312924 - 2312859
Alignment:
Q  351 aaacataaattattttaccttaaactcacttttggctcaattcaattttatagaatcaattcattg 416  Q
    |||||||||| |||||| |||||| |||||||| |||||| |||||||| ||||||||||| ||||    
T  2312924 aaacataaatcattttatcttaaagtcacttttagctcaaatcaattttttagaatcaatttattg 2312859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 559
Target Start/End: Original strand, 4593048 - 4593093
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaa 559  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  4593048 tggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaa 4593093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 576
Target Start/End: Original strand, 544850 - 544898
Alignment:
Q  528 cctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  544850 cctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 544898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 805
Target Start/End: Complemental strand, 28705897 - 28705857
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaa 805  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  28705897 cgttgacactaaatctcaaccgtacattatatttaatcaaa 28705857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 525 - 576
Target Start/End: Complemental strand, 4594025 - 4593974
Alignment:
Q  525 gtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||| |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  4594025 gtccatgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 4593974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 767 - 821
Target Start/End: Complemental strand, 1896895 - 1896841
Alignment:
Q  767 ttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctattaatttc 821  Q
    |||||||||||||||||||||  ||| ||||||||||||||||| || |||||||    
T  1896895 ttgacaccaaatctcaaccgtctattttatttaatcaaaggctcataataatttc 1896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 765 - 810
Target Start/End: Original strand, 28705198 - 28705243
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 810  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  28705198 cgtttacaccaaatctcaaccagacattatatttaatcaaaggctc 28705243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 575
Target Start/End: Original strand, 19271552 - 19271612
Alignment:
Q  516 gtcactttggtccctgaacc-aaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||| ||||||||||  |||| |||||||||||||||| |||||||||||| |||||    
T  19271552 gtcactttagtccctgaactgaaaattcaatatccccaaattaaatatcaaatccataaat 19271612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 816
Target Start/End: Complemental strand, 236251 - 236200
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctatta 816  Q
    |||||||||||||||||||||||  ||| ||||| ||||||||||| |||||    
T  236251 cgttgacaccaaatctcaaccgtctattttattttatcaaaggctcatatta 236200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 816
Target Start/End: Original strand, 236319 - 236370
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctatta 816  Q
    |||||||||||||||||||||||  ||| ||||| ||||||||||| |||||    
T  236319 cgttgacaccaaatctcaaccgtctattttattttatcaaaggctcatatta 236370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 560
Target Start/End: Complemental strand, 578684 - 578641
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaat 560  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||    
T  578684 tcactttggtccctgaaccgaaaatcaatatccctaaattgaat 578641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 809
Target Start/End: Complemental strand, 26874468 - 26874425
Alignment:
Q  766 gttgacaccaaatctcaaccgtacattatatttaatcaaaggct 809  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  26874468 gttgacatcaaatctcaaccgtatattttatttaatcaaaggct 26874425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 765 - 810
Target Start/End: Original strand, 1896233 - 1896278
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 810  Q
    |||||||||||||||||||||||  ||| ||||| |||||||||||    
T  1896233 cgttgacaccaaatctcaaccgtctattttatttgatcaaaggctc 1896278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 5e-49; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 630 - 753
Target Start/End: Complemental strand, 48670574 - 48670451
Alignment:
Q  630 tgaagaatactgggtttgaaaggtaatggttgtttaactgattaggacaaatagtatatgcttatgatgaattgaattttcaaatattattatttttgaa 729  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  48670574 tgaagaatactgggtttgaaaggtgatggtggtgtaactaattaggacaaatagtatatgcttatgatgaattggattttcaattattattatttttgaa 48670475  T
Q  730 gaaggggatattcaattattaaaa 753  Q
    ||||||||||||||||||||||||    
T  48670474 gaaggggatattcaattattaaaa 48670451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 7259620 - 7259558
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  7259620 tggtcactttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccctaaatc 7259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 630 - 718
Target Start/End: Complemental strand, 14309903 - 14309815
Alignment:
Q  630 tgaagaatactgggtttgaaaggtaatggttgtttaactgattaggacaaatagtatatgcttatgatgaattgaattttcaaatatta 718  Q
    ||||||||| ||||||||||||||||  || || ||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  14309903 tgaagaatattgggtttgaaaggtaacagtggtgtaactaattaggacaaatagtatatgcttataatgaattggattttcaattatta 14309815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 44334383 - 44334323
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  44334383 gtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 44334323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 7258463 - 7258525
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  7258463 tggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 7258525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 35729021 - 35728959
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  35729021 tggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatattaaatccctaaatc 35728959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 44333325 - 44333387
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  44333325 tggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 44333387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 576
Target Start/End: Original strand, 45583792 - 45583844
Alignment:
Q  524 ggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45583792 ggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 45583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 574
Target Start/End: Complemental strand, 7509385 - 7509327
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  7509385 gtcactttggtccctaaaccaaaaatcaatatccccaaattgaatctcaaatccctaaa 7509327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 30924944 - 30924882
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  30924944 tggtcactttgatctatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 30924882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 45584431 - 45584370
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  45584431 tggtcactttggtccctgaaccaaaa-tcaatattcccaaattgaatatcaaattcctaaatc 45584370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 10899008 - 10898947
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||    
T  10899008 tggtcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaat 10898947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 765 - 810
Target Start/End: Original strand, 26636136 - 26636181
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 810  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26636136 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 26636181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 48788607 - 48788546
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||||| |||||||    
T  48788607 tggtcactttggtccctgaaccaaaaatcaatattcacaaattgaatatcaaattcctaaat 48788546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 42478205 - 42478145
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    ||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  42478205 tggtcactttggtccatgaacaaaaaatcaatatcccctaattgaatatcaaatccctaaa 42478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 12223612 - 12223553
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  12223612 gtcactttgatccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaat 12223553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 43461652 - 43461589
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatca 577  Q
    ||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||||||    
T  43461652 tggtcactttgatccctgaaccaaaaatcaatatccctcaattgaatctcaaatccctaaatca 43461589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 10894531 - 10894592
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  10894531 tggtcactttagtccctggaccaaaaatca-tatccccaaattgaatatcaaatccctaaatc 10894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 12221489 - 12221551
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||||||||  |||||||    
T  12221489 tggtcaatttggtccctgaaccaaagatcaatatccccaaattgaatatcaaatttctaaatc 12221551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 791 - 845
Target Start/End: Original strand, 21869984 - 21870038
Alignment:
Q  791 ttatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtatatcc 845  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  21869984 ttatatttaatcaaaggctaatattaattttaatgtttctatttcctgtatatcc 21870038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 33607430 - 33607368
Alignment:
Q  513 ttggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||| | ||||||||||||    
T  33607430 ttggtcactttggtccttggaccaaaaatcaatatccccaaattgaatcttaaatccctaaat 33607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 572
Target Start/End: Complemental strand, 48647378 - 48647320
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcccta 572  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  48647378 tggtcactttcgtccctgaaccaaaaatcaatatgcccaaattgaataccaaatcccta 48647320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 43457656 - 43457718
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatca 577  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||| |||||||| |||||||    
T  43457656 tggtcactttggtccctg-accaaaaatcaatatccctaaattgaatctcaaatccttaaatca 43457718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 791 - 845
Target Start/End: Original strand, 21870742 - 21870796
Alignment:
Q  791 ttatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtatatcc 845  Q
    ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||    
T  21870742 ttatatttaatcaaaggttaatattaattttaatgtttctatttcctgtatatcc 21870796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 39708317 - 39708379
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||| |||| |||||||| ||||||| | |||||||||| |||||||||||||||    
T  39708317 tggtcactttggaccctaaaccaaaaatcaatattctcaaattgaatttcaaatccctaaatc 39708379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 805
Target Start/End: Original strand, 24452974 - 24453026
Alignment:
Q  753 agagtcattatccgttgacaccaaatctcaaccgtacattatatttaatcaaa 805  Q
    |||||||  |||||||||||||||||||||||||||||||  |||||||||||    
T  24452974 agagtcaggatccgttgacaccaaatctcaaccgtacatttcatttaatcaaa 24453026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 718 - 753
Target Start/End: Complemental strand, 14305413 - 14305378
Alignment:
Q  718 attatttttgaagaaggggatattcaattattaaaa 753  Q
    ||||||||||||||||||||||||||||||||||||    
T  14305413 attatttttgaagaaggggatattcaattattaaaa 14305378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 516 - 575
Target Start/End: Original strand, 46286713 - 46286772
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||| ||| |||||||||| ||||||| |||||||| ||| ||||||||||||||    
T  46286713 gtcactttgatccttgaaccaaaaatcaatattcccaaattaaatttcaaatccctaaat 46286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 48777445 - 48777507
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaa-ttgaatatcaaatccctaaatc 576  Q
    ||||||||||| | |||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  48777445 tggtcactttgattcctgaaccaaaa-tcaatatccccaaaattgaatttcaaatccctaaatc 48777507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 42477571 - 42477629
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||||||||||||||   ||||| |||| |||||||||||||| |||||||    
T  42477571 tcactttggtccctgaaccaaaaactaatattcccatattgaatatcaaattcctaaat 42477629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 567
Target Start/End: Original strand, 35727886 - 35727939
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaat 567  Q
    ||||||||||| ||| | |||||||| ||||||| |||||||||||||||||||    
T  35727886 tggtcactttgatcctttaaccaaaaatcaatattcccaaattgaatatcaaat 35727939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 570
Target Start/End: Complemental strand, 19433850 - 19433794
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccc 570  Q
    |||||| |||||| ||||||| |||| |||||||||||||||||||| || ||||||    
T  19433850 tggtcattttggttcctgaactaaaaatcaatatccccaaattgaatctctaatccc 19433794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 574
Target Start/End: Original strand, 24934985 - 24935045
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    ||||||||||| ||||| |||| ||| ||||||| || ||||||||| |||||||||||||    
T  24934985 tggtcactttgatccctaaaccgaaaatcaatattcctaaattgaatctcaaatccctaaa 24935045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 765 - 809
Target Start/End: Complemental strand, 30661474 - 30661430
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggct 809  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||    
T  30661474 cgttgacaccaaatctcaaccgttgattttatttaatcaaaggct 30661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 765 - 809
Target Start/End: Original strand, 37949638 - 37949682
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggct 809  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||    
T  37949638 cgttgacaccaaatctcaaccgttgattttatttaatcaaaggct 37949682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 572
Target Start/End: Original strand, 2677127 - 2677182
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcccta 572  Q
    |||||||| ||||||||| |||| |||||||||| ||||| ||| |||||||||||    
T  2677127 tcactttgttccctgaactaaaaatcaatatccctaaattaaatctcaaatcccta 2677182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 5930041 - 5929982
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||| |||||| | ||||| ||||||| |||||||||||| ||||||| |||||||    
T  5930041 tcactttgatccctggatcaaaaatcaatattcccaaattgaatctcaaatctctaaatc 5929982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 808
Target Start/End: Original strand, 19067670 - 19067713
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggc 808  Q
    |||||||||||||||||||||||  ||| |||||||||||||||    
T  19067670 cgttgacaccaaatctcaaccgttgattttatttaatcaaaggc 19067713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 385564 - 385503
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| ||||||||||| ||| ||||||| ||||| |||||| |||||||| ||||||    
T  385564 tggtcactttagtccctgaaccgaaagtcaatat-cccaagttgaatctcaaatccttaaatc 385503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 8048699 - 8048653
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaat 560  Q
    |||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  8048699 tggtcactttggtccctgaaccgaaaattaatatccacaaattgaat 8048653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 765 - 803
Target Start/End: Original strand, 21165268 - 21165306
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatca 803  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  21165268 cgttaacatcaaatctcaaccgtacattatatttaatca 21165306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 765 - 795
Target Start/End: Complemental strand, 26636879 - 26636849
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattata 795  Q
    |||||||||||||||||||||||||||||||    
T  26636879 cgttgacaccaaatctcaaccgtacattata 26636849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 576
Target Start/End: Original strand, 34707812 - 34707870
Alignment:
Q  518 cactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||| ||| || ||||||| | ||||||||||| |||||| |||||||||||||||    
T  34707812 cactttgttccatggaccaaaaattaatatccccaagttgaatttcaaatccctaaatc 34707870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 555
Target Start/End: Complemental strand, 44530552 - 44530511
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaat 555  Q
    |||||||||| ||||||||||||||| | |||||||||||||    
T  44530552 tggtcactttagtccctgaaccaaaaattaatatccccaaat 44530511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 4e-28; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 765 - 845
Target Start/End: Complemental strand, 37733618 - 37733538
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtatatcc 845  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  37733618 cgttgacaccaaatctcaacggtacattatatttaatcaaaggctgatattaattttaatgtttctatttcctgtatatcc 37733538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 1952905 - 1952843
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1952905 tggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccctaaatc 1952843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 32898380 - 32898318
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  32898380 tggtcactttggtccctgaaccaaaaatcaatatcctcaaattgaatatcaaatccctaaatc 32898318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 35177582 - 35177643
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  35177582 tggttactttggtccctgaaccaaaaatcagtatccccaaattgaatatcaaatccctaaat 35177643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 765 - 841
Target Start/End: Original strand, 41974674 - 41974750
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtat 841  Q
    |||||||||||||||||| || | ||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  41974674 cgttgacaccaaatctcagccattcattatatttaatcaaacgctcctatttgtgtcaatgtttctatttccagtat 41974750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 5737938 - 5737876
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||| || || ||||| |||||||||||||||||||| |||||||||||||||    
T  5737938 tggtcactttggtctctaaatcaaaaatcaatatccccaaattgaatctcaaatccctaaatc 5737876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 10406396 - 10406456
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||||||||| ||||||||    
T  10406396 gtcactttggtctctgaaccaaaaatcaatatttccaaattgaatatcaaattcctaaatc 10406456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 516 - 568
Target Start/End: Original strand, 41121315 - 41121367
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatc 568  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  41121315 gtcactttggtccttgaaccaaaaatcaatatccccaaattgaatttcaaatc 41121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 28619464 - 28619405
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||  ||| |||||||||| |||||||||||||||||||| |||||||||||||||    
T  28619464 tcactttaatccatgaaccaaaaatcaatatccccaaattgaatttcaaatccctaaatc 28619405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 35178737 - 35178678
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||| | ||||||    
T  35178737 tcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcttaaatc 35178678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 41122675 - 41122616
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||| |||||| |||||||    
T  41122675 gtcactttgatccctgaaccaaaaatcaatatctccaaattgaatctcaaattcctaaat 41122616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 45476478 - 45476416
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| ||||||||||||||| ||||||| |||||||| ||| ||||||| |||||||    
T  45476478 tggtcactttagtccctgaaccaaaaatcaatattcccaaattaaatctcaaatctctaaatc 45476416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 576
Target Start/End: Original strand, 5737052 - 5737112
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaa-tatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||| |||||| |||| |||||||||||||||| |||||||| ||||||    
T  5737052 tcactttggtccctgatccaaaaatcaaatatccccaaattgaatctcaaatccttaaatc 5737112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 755 - 814
Target Start/End: Complemental strand, 22649159 - 22649100
Alignment:
Q  755 agtcattatccgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctat 814  Q
    |||||| |||||||||||||||||||| |||||  ||| ||||| |||||||||||||||    
T  22649159 agtcatgatccgttgacaccaaatctcgaccgtctattttatttgatcaaaggctcctat 22649100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 10407519 - 10407467
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaa 566  Q
    |||| ||||| ||| ||||||||||| ||||||| ||||||||||||||||||    
T  10407519 tggttactttagtctctgaaccaaaaatcaatatgcccaaattgaatatcaaa 10407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 30134776 - 30134836
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| | |||||||| ||||||| | |||||||||| |||||||| ||||||    
T  30134776 gtcactttggtcctttaaccaaaaatcaatattcacaaattgaatttcaaatccttaaatc 30134836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 39138579 - 39138517
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| | | || ||| ||| ||||||||||| |||||||| |||||||||||||||    
T  39138579 tggtcactttgattcttgtaccgaaaatcaatatccccgaattgaatctcaaatccctaaatc 39138517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 4e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 673 - 753
Target Start/End: Complemental strand, 1313695 - 1313615
Alignment:
Q  673 aggacaaatagtatatgcttatgatgaattgaattttcaaatattattatttttgaagaaggggatattcaattattaaaa 753  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1313695 aggacaaatagtatatgcctatgatgaattggattttcaattattattatttttgaagaaggggatattcagttattaaaa 1313615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 32765125 - 32765187
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32765125 tggtcgctttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 32765187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 14704195 - 14704255
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  14704195 gtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 14704255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 43380775 - 43380836
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  43380775 tggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaattcctaaat 43380836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 39016316 - 39016256
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  39016316 gtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatgaaatccctaaatc 39016256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 517 - 576
Target Start/End: Original strand, 2910291 - 2910350
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  2910291 tcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcgaatccctaaatc 2910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 514 - 573
Target Start/End: Original strand, 21732303 - 21732362
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaa 573  Q
    |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  21732303 tggtcactttggtccctgaaccaaaaattaatatccccaaattgaatctcaaatccctaa 21732362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 765 - 810
Target Start/End: Original strand, 22559892 - 22559937
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 810  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22559892 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 22559937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 762 - 841
Target Start/End: Original strand, 42181898 - 42181974
Alignment:
Q  762 atccgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtat 841  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| || | ||||||||||| |||||    
T  42181898 atccgttgacaccaaatctcaaccgtacattatatt---tcaaaggctcttattaatgtctacgtttctatttcttgtat 42181974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 576
Target Start/End: Original strand, 31090351 - 31090407
Alignment:
Q  520 ctttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  31090351 ctttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccttaaatc 31090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 24458248 - 24458310
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||||| || ||||| ||||||||| |||||||||||||| |||||||||||    
T  24458248 tggtcactttggtccctcaatcaaaaatcaatatcctcaaattgaatatcagatccctaaatc 24458310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 24459389 - 24459327
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| | ||||||    
T  24459389 tggtcactttgatccctgaaccaaaaatcaatattcccaaattgaatatcaaattcgtaaatc 24459327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 33163366 - 33163312
Alignment:
Q  521 tttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  33163366 tttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaatctctaaat 33163312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 765 - 805
Target Start/End: Complemental strand, 22560586 - 22560546
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaa 805  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22560586 cgttgacaccaaatctcaaccgtacattatatttaatcaaa 22560546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 573
Target Start/End: Complemental strand, 21733686 - 21733627
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaa 573  Q
    |||||||||||||| ||||||| ||| ||||||| |||||||||||| ||||||||||||    
T  21733686 tggtcactttggtctctgaaccgaaaatcaatattcccaaattgaatctcaaatccctaa 21733627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 40000267 - 40000208
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||  |||||||    
T  40000267 tcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaatttctaaatc 40000208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 7412300 - 7412362
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| ||||| ||||||||  ||||||||| ||||||||| |||||||||||||||    
T  7412300 tggtcactttgttccctcaaccaaaaaacaatatccctaaattgaatctcaaatccctaaatc 7412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 568
Target Start/End: Complemental strand, 17330154 - 17330100
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatc 568  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||    
T  17330154 tggtcactttggtccctgaacccaaaatcaatatccctaaattgaatctcaaatc 17330100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 39015193 - 39015255
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||| |||||||| |||||||||| ||||||| ||||||||||||||||||| || |||||    
T  39015193 tggtcagtttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattccaaaatc 39015255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 765 - 815
Target Start/End: Complemental strand, 42182633 - 42182583
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctatt 815  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  42182633 cgttgacaccaaatctcaaccgtagattatatttgatcaaaggctactatt 42182583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 2911420 - 2911360
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||| || |||||||| |||||||  |||||||||||||||||| ||||||||    
T  2911420 gtcactttggtctcttaaccaaaaatcaatatttccaaattgaatatcaaattcctaaatc 2911360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 43381104 - 43381045
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||| ||||||||||||||  ||| |||||||||| ||||||||| ||||||||||||||    
T  43381104 gtcattttggtccctgaacacaaaatcaatatccctaaattgaatctcaaatccctaaat 43381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 12010263 - 12010301
Alignment:
Q  530 tgaaccaaaactcaatatccccaaattgaatatcaaatc 568  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12010263 tgaaccaaaaatcaatatccccaaattgaatatcaaatc 12010301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 31091462 - 31091400
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||  |||||||||| ||||||| || | |||||||||||||| ||||||||    
T  31091462 tggtcactttggtctttgaaccaaaaatcaatattccgagattgaatatcaaattcctaaatc 31091400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 572
Target Start/End: Original strand, 31442547 - 31442597
Alignment:
Q  522 ttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcccta 572  Q
    |||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  31442547 ttggtccctgaaccgaaaatcaatatccctaaattgaatctcaaatcccta 31442597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 33161979 - 33162037
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||| ||||||||||||||| || |||||||||||| |||| |||||||| |||||    
T  33161979 tcactttagtccctgaaccaaaaatcgatatccccaaatcgaatctcaaatccttaaat 33162037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 39999140 - 39999197
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||| ||||||||| |||| |||||||||   ||||||||||||||||||||||||    
T  39999140 gtcactttgatccctgaacaaaaaatcaatatcc---aattgaatatcaaatccctaaatc 39999197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 577
Target Start/End: Original strand, 7073841 - 7073902
Alignment:
Q  517 tcactttggtccctgaacc-aaaactcaatatccccaaattgaatatcaaatccctaaatca 577  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||| |||||||| |||||||    
T  7073841 tcactttggtccctgaaccaaaaattcaatattcctaaattgaatctcaaatccttaaatca 7073902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 5914945 - 5914885
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||| | ||||| |||||||    
T  5914945 gtcactttagtccctgaaccaaaaatcaatatccccagcttgaatctaaaatctctaaatc 5914885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 575
Target Start/End: Original strand, 12003782 - 12003836
Alignment:
Q  521 tttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||| || |||| |||  ||||||||||||||||||||||||||| ||||||    
T  12003782 tttggtctctcaaccgaaaaccaatatccccaaattgaatatcaaatctctaaat 12003836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 39256936 - 39256872
Alignment:
Q  514 tggtcactttggtcc--ctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| |  ||||||||||| | ||||| ||| |||||||| |||||||||||||||    
T  39256936 tggtcactttggttctcctgaaccaaaaattaatattccccaattgaatctcaaatccctaaatc 39256872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 42278237 - 42278299
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42278237 tggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 42278299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 47874751 - 47874813
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||    
T  47874751 tggtcactttggtccttgaaccaaaaatcaatatcccaaaattgaatatcaaatccctaaatc 47874813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 47878419 - 47878358
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||| |||||||    
T  47878419 tggtcactttggtccctgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaat 47878358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 20599821 - 20599759
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |||||| ||||||||    
T  20599821 tggtcactttggtccctgaaccaaaaattaatattcccaaattgaatctcaaattcctaaatc 20599759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 577
Target Start/End: Complemental strand, 4703130 - 4703069
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatca 577  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || |||||    
T  4703130 gtcactttggtccctgacccaaaaatcaatatccccaaattgaatctcaaatctctgaatca 4703069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 765 - 810
Target Start/End: Complemental strand, 26159640 - 26159595
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 810  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  26159640 cgttgacaccaaatcgcaaccgtacattatatttaatcaaaggctc 26159595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 19050447 - 19050505
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||| ||||||||||||||    
T  19050447 tcactttggtccttgaagcaaaaatcaatatccctaaattgaatctcaaatccctaaat 19050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 4701973 - 4702033
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||| ||||| |||||||||  ||||||||| ||||||| |||||||    
T  4701973 gtcactttggtccctgaaacaaaagtcaatatcctaaaattgaatctcaaatctctaaatc 4702033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 53771003 - 53770944
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||| ||| | ||||||||| ||||||||||||| |||||| ||||||||||||||    
T  53771003 gtcactttagtctccgaaccaaaaatcaatatccccaacttgaatctcaaatccctaaat 53770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 38216652 - 38216714
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||| ||||||| |||||| | | | |||||||||| |||||||||||||||||||||||||    
T  38216652 tggtccctttggttcctgaatcgataatcaatatcccaaaattgaatatcaaatccctaaatc 38216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 576
Target Start/End: Original strand, 26170856 - 26170913
Alignment:
Q  519 actttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||| |||||||||| ||| ||||||| |||||||||||| | |||||||||||||    
T  26170856 actttgatccctgaaccgaaaatcaatattcccaaattgaatttgaaatccctaaatc 26170913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 53770501 - 53770562
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||| ||| || || || || ||||||||||||| |||||||||||||||||||||    
T  53770501 tggtcactttagtcactaaagcagaaatcaatatccccaacttgaatatcaaatccctaaat 53770562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 765 - 809
Target Start/End: Original strand, 5046018 - 5046062
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggct 809  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||    
T  5046018 cgttgacaccaaatctcaaccgtttattttatttaatcaaaggct 5046062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 765 - 809
Target Start/End: Original strand, 7841578 - 7841622
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggct 809  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  7841578 cgttgacaccaaatctcatccgtatattttatttaatcaaaggct 7841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 765 - 815
Target Start/End: Complemental strand, 12920293 - 12920243
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctatt 815  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||||| ||||    
T  12920293 cgttgacaccaaatctcaaccgtttattttatttaatcaatggctcatatt 12920243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 56041182 - 56041227
Alignment:
Q  528 cctgaaccaaaactcaatatccccaaattgaatatcaaatccctaa 573  Q
    ||||||| |||| ||||||||| |||||||||| ||||||||||||    
T  56041182 cctgaactaaaaatcaatatccacaaattgaatttcaaatccctaa 56041227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 6e-24; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 55388247 - 55388308
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55388247 tggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaat 55388308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 48808560 - 48808622
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  48808560 tggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaatccctaaatc 48808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 36279140 - 36279202
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  36279140 tggtcactttggtccctgaaccaaaaaaaaatatccccaaattgaatatcaaatccctaaatc 36279202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 52318252 - 52318190
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  52318252 tggtcactttggtccatgaaccaaaaaacaatatccccaaattgaatatcaaatccctaaatc 52318190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 48574394 - 48574332
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  48574394 tggtcactttagtccttgaaccaaaattcaatatccccaaattgaatatcaaatctctaaatc 48574332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 55389404 - 55389342
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||    
T  55389404 tggtcactttggtccctgaaccgaaaatcaatattcccaaattgaatatcaaattcctaaatc 55389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 753 - 805
Target Start/End: Complemental strand, 41475345 - 41475293
Alignment:
Q  753 agagtcattatccgttgacaccaaatctcaaccgtacattatatttaatcaaa 805  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41475345 agagtcaggatccgttgacaccaaatctcaaccgtacattatatttaatcaaa 41475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 53959033 - 53958973
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  53959033 gtcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 53958973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 33837351 - 33837406
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcc 569  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  33837351 tggtcactttggtccctgaaccaaaaatcaatatccccagattgaatttcaaatcc 33837406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 575
Target Start/End: Complemental strand, 17701861 - 17701803
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||    
T  17701861 tcactttggtccctgaagcaaaaatcaatattcccaaattgaatatcaaatcccaaaat 17701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 36280252 - 36280190
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| |||||| |||||||| ||||||| ||||||||||||||||||| ||||||||    
T  36280252 tggtcactttagtccctaaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatc 36280190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 47118007 - 47117945
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  47118007 tggtcactttagtccctgaaccaaaaatcaatatccccaacttgaatctcgaatccctaaatc 47117945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 576
Target Start/End: Original strand, 53957866 - 53957923
Alignment:
Q  519 actttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||    
T  53957866 actttagtccatgaaccaaaaatcaatatccccaaattgaatgtcaaatccctaaatc 53957923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 47075304 - 47075245
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||| | ||||||||||||    
T  47075304 gtcactttagtccctgaaccaaaaatcaatatccccaacttgaatcttaaatccctaaat 47075245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 20464277 - 20464339
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||| |||| ||||| ||||||||||||| |||||  |||||||||||||||    
T  20464277 tggtcactttggtccatgaatcaaaaatcaatatccccaatttgaacctcaaatccctaaatc 20464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 17700707 - 17700768
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||||||||||||||| |||| ||||||  || |||||||||||||||| |||||||    
T  17700707 tggtcactttggtccctgaacaaaaaatcaataatccaaaattgaatatcaaattcctaaat 17700768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 765 - 810
Target Start/End: Original strand, 41474684 - 41474729
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggctc 810  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||    
T  41474684 cgtttacacaaaatctcaaccgtacattatatttaatcaaaggctc 41474729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 48573173 - 48573234
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||||| ||| |||||||||| ||||||| || |||||||||||||||| |||||||    
T  48573173 tggtcactttgatccatgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaat 48573234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 48809590 - 48809529
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||||||| ||| |||||||||| ||||||| || |||||||||||||||| |||||||    
T  48809590 tggtcactttgatccatgaaccaaaaatcaatattcctaaattgaatatcaaattcctaaat 48809529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 576
Target Start/End: Complemental strand, 36827383 - 36827328
Alignment:
Q  521 tttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| | ||| |||||||||||||||||||| |||||| ||||||||    
T  36827383 tttggtccctgaatcgaaaatcaatatccccaaattgaatttcaaattcctaaatc 36827328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 45600883 - 45600833
Alignment:
Q  525 gtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||| |||||||||| ||||||||||||| |||||| ||||||||||||||    
T  45600883 gtccttgaaccaaaaatcaatatccccaacttgaatttcaaatccctaaat 45600833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 765 - 805
Target Start/End: Original strand, 981701 - 981741
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaa 805  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  981701 cgttgacaccaaatctcaaccgtacatttcatttaatcaaa 981741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Original strand, 3671246 - 3671285
Alignment:
Q  521 tttggtccctgaaccaaaactcaatatccccaaattgaat 560  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  3671246 tttggtccctgaaccgaaaatcaatatccccaaattgaat 3671285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 576
Target Start/End: Complemental strand, 19115098 - 19115040
Alignment:
Q  518 cactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||| |||| ||||| |||| ||||||||||||| |||||||||| ||||| |||||    
T  19115098 cactttagtccatgaactaaaaatcaatatccccaatttgaatatcatatccccaaatc 19115040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 517 - 571
Target Start/End: Original strand, 33427922 - 33427976
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccct 571  Q
    ||||||| | ||||||||||||| ||||||||||||| |||||| | ||||||||    
T  33427922 tcactttagcccctgaaccaaaaatcaatatccccaacttgaatcttaaatccct 33427976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 574
Target Start/End: Original strand, 40317960 - 40318018
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    |||||||||||||||||| ||||| ||||||| || ||||| ||| |||||||| ||||    
T  40317960 gtcactttggtccctgaatcaaaaatcaatattccaaaattaaatctcaaatccataaa 40318018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 575
Target Start/End: Complemental strand, 47428518 - 47428457
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||| ||||||||||||||| | ||||| |  || |||||| ||||||||||||||    
T  47428518 tggtcactttagtccctgaaccaaaaattaatattcataacttgaatctcaaatccctaaat 47428457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 4e-22; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 9339834 - 9339896
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9339834 tggtcactttggtctctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 9339896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 576
Target Start/End: Original strand, 7944346 - 7944405
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  7944346 tcactttggtccctggaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 7944405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 32665705 - 32665642
Alignment:
Q  514 tggtcactttggtccctgaac-caaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  32665705 tggtcactttggtccctgaacacaaaaatcaatatccccaaattgaatatcaaatccctaaatc 32665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 34088382 - 34088322
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  34088382 gtcactttggtccctgaacaaaaattcaatatccccaaattgaatttcaaatccctaaatc 34088322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 9340960 - 9340898
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||    
T  9340960 tggtcactttggtccctgaaccaaaattcaatattcccaaaatgaatatcaaattcctaaatc 9340898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 519 - 576
Target Start/End: Complemental strand, 6613897 - 6613840
Alignment:
Q  519 actttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6613897 actttgttccctgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaatc 6613840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 25038092 - 25038149
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  25038092 tcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaaa 25038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 25043304 - 25043361
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  25043304 tcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaaa 25043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 6612621 - 6612679
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    ||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  6612621 tcacttttgtccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaat 6612679  T

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Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 767 - 841
Target Start/End: Complemental strand, 8988565 - 8988491
Alignment:
Q  767 ttgacaccaaatctcaaccgtacattatatttaatcaaaggctcctattaatttcaatgtttctatttcctgtat 841  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||| | || | ||||||||||| |||||    
T  8988565 ttgacaccaaatctcaaccgtacattatatttaattaaaagctcttattagtgtctacgtttctatttcttgtat 8988491  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 52439649 - 52439711
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||| ||||||||    
T  52439649 tggtcactttgatccctaaaccaaaaatcaatatcctcaaattgaatatcaaattcctaaatc 52439711  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 52440493 - 52440433
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||||||||| ||||||||    
T  52440493 gtcactttggtccctgaaccaaaaataagtattcccaaattgaatatcaaattcctaaatc 52440433  T

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Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 762 - 809
Target Start/End: Complemental strand, 27257445 - 27257398
Alignment:
Q  762 atccgttgacaccaaatctcaaccgtacattatatttaatcaaaggct 809  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  27257445 atccattgacaccaaatctcaatcgtacattatatttaatcaaaggct 27257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 3117868 - 3117918
Alignment:
Q  525 gtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  3117868 gtccttgaaccaaaaattaatatccccaaattgaatatcaaatccctaaat 3117918  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 816
Target Start/End: Original strand, 8987823 - 8987875
Alignment:
Q  765 cgttgacaccaaatctcaaccgtaca-ttatatttaatcaaaggctcctatta 816  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  8987823 cgttgacaccaaatctcaaccatacagttatatttgatcaaaggctcctatta 8987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 51453652 - 51453592
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||| |||||||| || || ||||||||| |||||||||| |||||||||||||||    
T  51453652 gtcactttgatccctgaatcataaatcaatatccgcaaattgaatttcaaatccctaaatc 51453592  T

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Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 16249851 - 16249913
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||| ||| ||||||||||| ||| |||||||||| ||||||||| | |||||||||||||    
T  16249851 tggtcattttagtccctgaaccgaaaatcaatatccctaaattgaatcttaaatccctaaatc 16249913  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 576
Target Start/End: Original strand, 26518297 - 26518359
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||| ||||||| |||  ||||||| ||||||||||| |||||| ||||||||    
T  26518297 tggtcactttggtctctgaaccgaaaaccaatatctccaaattgaatctcaaattcctaaatc 26518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 762 - 807
Target Start/End: Complemental strand, 8549512 - 8549467
Alignment:
Q  762 atccgttgacaccaaatctcaaccgtacattatatttaatcaaagg 807  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||    
T  8549512 atccgttgacactaaatctcaactgtacattttatttaatcaaagg 8549467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 34085733 - 34085790
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    |||||||| | | |||||||||| |||||||||||||||||||| |||||| ||||||    
T  34085733 tcactttgatgcttgaaccaaaaatcaatatccccaaattgaatttcaaattcctaaa 34085790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 576
Target Start/End: Complemental strand, 39726589 - 39726540
Alignment:
Q  527 ccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||| |||||||| |||||||||||  ||||||||||||||    
T  39726589 ccctgaaccaaaaatcaatatcaccaaattgaattccaaatccctaaatc 39726540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 572
Target Start/End: Original strand, 39977545 - 39977598
Alignment:
Q  519 actttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcccta 572  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||  ||||||||||    
T  39977545 actttggtctctgaaccaaaaatcaatatcctcaaattgaatcgcaaatcccta 39977598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 569
Target Start/End: Original strand, 22856889 - 22856941
Alignment:
Q  517 tcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatcc 569  Q
    ||||||| || |||||||||||| ||||||||| |||||||||| ||||||||    
T  22856889 tcactttagttcctgaaccaaaattcaatatcctcaaattgaatctcaaatcc 22856941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 552
Target Start/End: Original strand, 23703898 - 23703934
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatcccca 552  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23703898 gtcactttggtccctgaaccaaaaatcaatatcccca 23703934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 576
Target Start/End: Original strand, 32664693 - 32664752
Alignment:
Q  516 gtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||||  |||| ||||| ||||||| ||||||||||||||||||| ||||||||    
T  32664693 gtcactttggtct-tgaatcaaaaatcaatattcccaaattgaatatcaaattcctaaatc 32664752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 576
Target Start/End: Complemental strand, 22857479 - 22857432
Alignment:
Q  529 ctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    ||||||||||| ||||||| |||||||||||| |||||||| ||||||    
T  22857479 ctgaaccaaaaatcaatatacccaaattgaatctcaaatccttaaatc 22857432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 808
Target Start/End: Complemental strand, 34309249 - 34309206
Alignment:
Q  765 cgttgacaccaaatctcaaccgtacattatatttaatcaaaggc 808  Q
    |||||||||||||||||||||||  ||| |||||||||||||||    
T  34309249 cgttgacaccaaatctcaaccgttgattttatttaatcaaaggc 34309206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 556
Target Start/End: Complemental strand, 7945489 - 7945447
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaatt 556  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||    
T  7945489 tggtcactttggtccctaaaccaaaaatcaatattcccaaatt 7945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 807
Target Start/End: Original strand, 33504106 - 33504151
Alignment:
Q  762 atccgttgacaccaaatctcaaccgtacattatatttaatcaaagg 807  Q
    |||||||||||||||||||||||| | |||| |||| |||||||||    
T  33504106 atccgttgacaccaaatctcaaccatccattttattcaatcaaagg 33504151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 6168 - 6106
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||| |||||| ||||||||    
T  6168 tggtcactttggtccctgaaccaaaaatcaatatccccaaatataatctcaaattcctaaatc 6106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 573
Target Start/End: Original strand, 5805 - 5864
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaa 573  Q
    ||||||||||| |||||||||||||| ||||||||| |||||| ||| ||||||||||||    
T  5805 tggtcactttgatccctgaaccaaaaatcaatatcctcaaattaaatctcaaatccctaa 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 31239902 - 31239840
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaatc 576  Q
    |||||||||| || | |||||||||| |||||||||||||||||||| |||||||| ||||||    
T  31239902 tggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 31239840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 12104187 - 12104130
Alignment:
Q  353 acataaattattttaccttaaactcacttttggctcaattcaattttatagaatcaat 410  Q
    |||||||||||||||  || |||||||||||  ||||| |||||||||||||||||||    
T  12104187 acataaattattttatattcaactcacttttatctcaaatcaattttatagaatcaat 12104130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 383
Target Start/End: Original strand, 7486526 - 7486559
Alignment:
Q  350 caaacataaattattttaccttaaactcactttt 383  Q
    ||||||||||| ||||||||||||||||||||||    
T  7486526 caaacataaatcattttaccttaaactcactttt 7486559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 36460 - 36400
Alignment:
Q  514 tggtcactttggtccctgaaccaaaactcaatatccccaaattgaatatcaaatccctaaa 574  Q
    ||||||||||| |||||||||| ||| |||||||||  ||||||||  |||||||||||||    
T  36460 tggtcactttgatccctgaaccgaaaatcaatatcctaaaattgaaactcaaatccctaaa 36400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 805
Target Start/End: Original strand, 15914 - 15957
Alignment:
Q  762 atccgttgacaccaaatctcaaccgtacattatatttaatcaaa 805  Q
    |||||||||||||||||||||||| ||||||  |||||||||||    
T  15914 atccgttgacaccaaatctcaaccatacatttcatttaatcaaa 15957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 8723 - 8768
Alignment:
Q  530 tgaaccaaaactcaatatccccaaattgaatatcaaatccctaaat 575  Q
    |||||||||| ||||||||||||| || ||| ||||||||||||||    
T  8723 tgaaccaaaaatcaatatccccaacttaaatctcaaatccctaaat 8768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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