View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18151_low_17 (Length: 254)
Name: NF18151_low_17
Description: NF18151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18151_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 6725209 - 6725436
Alignment:
| Q |
18 |
taaagctttgtaacaacacaaataaatcttttgagagtgtcgtcgacaccccaaataaaatagactcgacaaacaaacacgttacaaaaagatgtacttc |
117 |
Q |
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| T |
6725209 |
taaagctttgtaacaacacaaataaatcttttgagagtgtcgtcgacaccccaaatcaaatagactcgaccaacaaacatgttacaaaaagatgtacttc |
6725308 |
T |
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| Q |
118 |
cgactccgatagctctaaccaccatcaacacaaagattattgcaacaaataaaaattgccatgactagtcaagcttcttctaaataccatatatataaac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
6725309 |
cgactccgatagctctaaccaccatcaacacaaagattattacaacaaataaaaattgccatgactagtcaagcttctcctaaataccatatatataaac |
6725408 |
T |
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| Q |
218 |
aaagagggttgatatttggacacaggtt |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
6725409 |
aaagagggttgatatttggacacaggtt |
6725436 |
T |
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