View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18153_high_39 (Length: 340)
Name: NF18153_high_39
Description: NF18153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18153_high_39 |
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Alignment Details
Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 175 - 322
Target Start/End: Complemental strand, 24998876 - 24998729
Alignment:
| Q |
175 |
aaaagtttgtaagaagaagttagaaactttgaagcaaataaacagatcacaaattaccatcaaatttcatatttgattttccagtttatgtgattgtaaa |
274 |
Q |
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| T |
24998876 |
aaaagtttgtaagaagaagttagaaactttgaagcaaataaacagatcaaaaattaccatcaaatttcatatttgattttccggtttatgtgattgtaaa |
24998777 |
T |
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| Q |
275 |
ctgcaattaagaaaagaaattatgtaaccatgtgtggtggttgtaatt |
322 |
Q |
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|||||||| |||||||||||||||||||| |||||||| ||||||||| |
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| T |
24998776 |
ctgcaattgagaaaagaaattatgtaaccgtgtgtggtagttgtaatt |
24998729 |
T |
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