View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18153_high_60 (Length: 234)
Name: NF18153_high_60
Description: NF18153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18153_high_60 |
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| [»] scaffold0155 (1 HSPs) |
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Alignment Details
Target: scaffold0155 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0155
Description:
Target: scaffold0155; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 25787 - 25994
Alignment:
| Q |
9 |
tgtcgaagaatatcaacatcttttgcgagtattgggcatatatcatttttatgcagactatcaatacaatcatcaatgtgttgcataacaaaacctattt |
108 |
Q |
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| T |
25787 |
tgtcgaagaatatcaacatcctttgcaagtattgggctagtatcatttttatgcagactatcaatacaatcatcaatgtgttgcataacaaaacctattt |
25886 |
T |
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| Q |
109 |
gtgaagccatgtctggataatttttgagctccaaatctattttcgcacccaaaagcctaccgcgaatgctatcatcgccatcgaaatctattgcacaatg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
25887 |
gtgaagccatgtctggataatttttgagctccaaatctattttcgcacccaaaagcctaccgcgaatgctatcatcgccatcgaaatctattgcacaacg |
25986 |
T |
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| Q |
209 |
agtataat |
216 |
Q |
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|||||||| |
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| T |
25987 |
agtataat |
25994 |
T |
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