View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18153_low_1 (Length: 1023)

Name: NF18153_low_1
Description: NF18153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18153_low_1
NF18153_low_1
[»] chr2 (15 HSPs)
chr2 (18-1012)||(6915257-6916251)
chr2 (85-183)||(10543505-10543603)
chr2 (85-183)||(10471307-10471405)
chr2 (85-183)||(28106207-28106305)
chr2 (85-165)||(27966389-27966469)
chr2 (85-183)||(10859023-10859121)
chr2 (21-73)||(28105350-28105402)
chr2 (32-79)||(10507349-10507396)
chr2 (18-72)||(10492777-10492831)
chr2 (21-67)||(10860707-10860753)
chr2 (18-79)||(10463585-10463646)
chr2 (21-78)||(10474161-10474218)
chr2 (18-72)||(7476568-7476622)
chr2 (102-164)||(9081351-9081413)
chr2 (21-67)||(10848803-10848849)
[»] chr7 (11 HSPs)
chr7 (691-813)||(15039269-15039391)
chr7 (815-939)||(15038314-15038438)
chr7 (440-544)||(15040241-15040345)
chr7 (548-621)||(15040064-15040137)
chr7 (85-183)||(15044800-15044898)
chr7 (180-270)||(15043971-15044061)
chr7 (945-1004)||(15038108-15038167)
chr7 (380-435)||(15041840-15041895)
chr7 (20-83)||(15045570-15045633)
chr7 (268-330)||(15043792-15043854)
chr7 (623-677)||(15039923-15039977)
[»] chr8 (3 HSPs)
chr8 (524-593)||(43895529-43895598)
chr8 (524-593)||(44305953-44306022)
chr8 (18-68)||(44307022-44307072)
[»] chr5 (2 HSPs)
chr5 (386-464)||(35856854-35856932)
chr5 (85-183)||(33601026-33601124)


Alignment Details
Target: chr2 (Bit Score: 935; Significance: 0; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 935; E-Value: 0
Query Start/End: Original strand, 18 - 1012
Target Start/End: Original strand, 6915257 - 6916251
Alignment:
Q  18 caattcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgctgtcaaaaacacgggggtacaaccacttctggatggtgtagttac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6915257 caattcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgctgtcaaaaacacgggggtacaaccacttctggatggtgtagttag 6915356  T
Q  118 ttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggttcagctgactggaagtcccgatgggccccttgta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6915357 ttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggttcagctgactggaagtcccgatgggcctcttgta 6915456  T
Q  218 gcattggctttcaagttggagcaaaggaagtttggtcagttaacatatctaagagtttatgagggcgtcattcggaagggtgattttattgttaatgtta 317  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6915457 gcattggctttcaagttggagcaaacgaagtttggtcagttaacatatctaagagtttatgagggtgtcattcggaagggtgattttattgttaatgtta 6915556  T
Q  318 gcactggaaagaaaattaaggttcctcgcttggttgagatgcattctaatgagatgaatgacattgaagaggcccatgctggccaaatagttgctgtatt 417  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6915557 gcactggaaagaaaattaaggttcctcgcttagttcagatgcattctaatgagatgaacgacattgaagaggcccatgctggccaaatagttgctgtatt 6915656  T
Q  418 tggtgttgattgtgcatccggcgatacatttactgatgggtcggttaaatacacaatgacttctatgaatgttcctgagcccgtgatgtcattagctgta 517  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6915657 tggtgttgattgtgcatccagcgatacatttactgatgggtcggttaaatacacaatgacttctatgaatgttcctgagcccgtgatgtcattagctgta 6915756  T
Q  518 cagccagtctcaaaagattctggagggaaattttcaaaagctttgaaccgcttccaaagagaggatcctactttccgtgttagcttggacccagagagta 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  6915757 cagccagtctcaaaagattctggagggaaattttcaaaagctttgaaccgcttccaaagagaggatcctacttttcgtgttagcttggacccagagagtg 6915856  T
Q  618 ggcaaacaatcatttctggagtgggagaactacacttagatatttatgttaaatgcattaagatggagtatggggttgatgctacagttggaaagccccg 717  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6915857 ggcaaacaatcatttctggaatgggagaactacacttagatatttatgttaaacgcattaagatggagtatggggttgatgctacagttggaaagccccg 6915956  T
Q  718 ggtaaacttcagagaaactgttactcaacgtgctgattttgattatttacataagaagcaatctggaggacaaggacaatatggacgagtgattggatat 817  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6915957 ggtaaacttcagagaaactgttactcaacgtgctgattttgattatttacataagaagcaatctggagggcaaggacaatatggacgagtgattggatat 6916056  T
Q  818 attgaaccacttcctgctgggtcaggaactaagtttgaatttgacaacatgcttgttggtcaagctattccatcgaattttttccctgcaattgagaaag 917  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6916057 attgaaccacttcctgctgggtcaggaactaagtttgaatttgacaacatgcttgttggtcaagctattccatcgaattttttccctgcaattgagaaag 6916156  T
Q  918 gttttaaagaagctgccaactctggtgccttgattggacatccagttgaaaatctccgagttgtcttgacagatggtgctgctcatgatgatgat 1012  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6916157 gttttaaagaagctgccaactctggtgccttgattggacatccagttcaaaatctccgagttgtcttgacagatggtgctgctcatgatgttgat 6916251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 10543603 - 10543505
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggt 183  Q
    |||| |||||| |||| ||||||||||| ||| ||||||||| ||||| | ||||| ||||||||||||||| | |||||||||||||||||| |||||    
T  10543603 ggggttacaactacttttggatggtgtacttaattatttgccgtgtccaactgaagctagtaattatgctctcgtccaatccaagaatgaggaaaaggt 10543505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 10471405 - 10471307
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggt 183  Q
    |||| |||||| |||| ||||||||||| ||| ||||||||| ||||| | ||||| ||||||||||||||| | |||||| ||||||||||| |||||    
T  10471405 ggggctacaactacttttggatggtgtacttaattatttgccgtgtccaactgaagctagtaattatgctctcgtccaatctaagaatgaggaaaaggt 10471307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 28106207 - 28106305
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggt 183  Q
    |||| |||||| |||| ||||||||||| ||| ||||||||| ||||| ||||||| |||||||||| ||||||||||||| ||| ||| ||| |||||    
T  28106207 ggggctacaactacttttggatggtgtaattaattatttgccgtgtccaattgaagctagtaattatactcttgaccaatctaagcatggggaaaaggt 28106305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 27966469 - 27966389
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatc 165  Q
    |||| |||||| |||| ||||||||||| ||| ||||||||| ||||| ||||||| |||||||||| |||||||||||||    
T  27966469 ggggctacaactacttttggatggtgtaattaattatttgccgtgtccaattgaagctagtaattatactcttgaccaatc 27966389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 10859121 - 10859023
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggt 183  Q
    |||| |||||| |||| |||||||||||  || ||||||||| ||||| | |||||||||||||||| |||| ||| |||| ||||||| ||| |||||    
T  10859121 ggggctacaactacttttggatggtgtaactaattatttgccctgtccaactgaagttagtaattattctctcgacaaatctaagaatggggaaaaggt 10859023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 28105350 - 28105402
Alignment:
Q  21 ttcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgct 73  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||| ||||    
T  28105350 ttcgtagggccaccatagcacggaagtttataccagtattcatgggtaatgct 28105402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 10507396 - 10507349
Alignment:
Q  32 accatagcacggaaatttataccggtattcatgggtagtgctgtcaaa 79  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  10507396 accatagcacggaaatttatacccgtattcatgggcagtgctttcaaa 10507349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 10492831 - 10492777
Alignment:
Q  18 caattcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgc 72  Q
    ||||||||||||| ||||||||||  |||||| ||||||| ||||||||||||||    
T  10492831 caattcgtagggcaaccatagcacataaatttgtaccggttttcatgggtagtgc 10492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 10860753 - 10860707
Alignment:
Q  21 ttcgtagggctaccatagcacggaaatttataccggtattcatgggt 67  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||    
T  10860753 ttcgtagggtcaccatagcacggaaatttataccagtattcatgggt 10860707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 10463646 - 10463585
Alignment:
Q  18 caattcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgctgtcaaa 79  Q
    |||||||||| || || ||||||||||||||||||||  | ||||||||||||||| |||||    
T  10463646 caattcgtagagccacgatagcacggaaatttataccatttttcatgggtagtgctttcaaa 10463585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 10474218 - 10474161
Alignment:
Q  21 ttcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgctgtcaa 78  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||| |||||| ||||    
T  10474218 ttcgtagggccaccatagcacggaagtttataccaatattcatgggcagtgctttcaa 10474161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 7476568 - 7476622
Alignment:
Q  18 caattcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgc 72  Q
    |||||| |||||| || ||||||| ||||||| ||||||| ||||||||||||||    
T  7476568 caattcatagggcaactatagcacagaaatttgtaccggttttcatgggtagtgc 7476622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 9081351 - 9081413
Alignment:
Q  102 tggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaat 164  Q
    ||||||||||| ||| ||||||||| ||||| |||||||  ||||||||||| || |||||||    
T  9081351 tggatggtgtacttaattatttgccgtgtccaattgaagcaagtaattatgcgctcgaccaat 9081413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 10848849 - 10848803
Alignment:
Q  21 ttcgtagggctaccatagcacggaaatttataccggtattcatgggt 67  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  10848849 ttcgtagggccaccatagcacacaaatttataccagtattcatgggt 10848803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 4e-53; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 691 - 813
Target Start/End: Complemental strand, 15039391 - 15039269
Alignment:
Q  691 ggttgatgctacagttggaaagccccgggtaaacttcagagaaactgttactcaacgtgctgattttgattatttacataagaagcaatctggaggacaa 790  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  15039391 ggttgatgctacagttggaaagccccgtgtaaacttcagagaaactgttactcaacgtgctgattttgattatttacataagaagcaatccggagggcaa 15039292  T
Q  791 ggacaatatggacgagtgattgg 813  Q
    |||||||||||||| ||||||||    
T  15039291 ggacaatatggacgggtgattgg 15039269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 815 - 939
Target Start/End: Complemental strand, 15038438 - 15038314
Alignment:
Q  815 tatattgaaccacttcctgctgggtcaggaactaagtttgaatttgacaacatgcttgttggtcaagctattccatcgaattttttccctgcaattgaga 914  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  15038438 tatattgaaccactccctgctgggtcagaaactaagtttgaatttgaaaacatgcttgttggtcaagctattccatcaaattttttcgctgcaattgaga 15038339  T
Q  915 aaggttttaaagaagctgccaactc 939  Q
    ||||||||| |||||||||||||||    
T  15038338 aaggttttatagaagctgccaactc 15038314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 440 - 544
Target Start/End: Complemental strand, 15040345 - 15040241
Alignment:
Q  440 gatacatttactgatgggtcggttaaatacacaatgacttctatgaatgttcctgagcccgtgatgtcattagctgtacagccagtctcaaaagattctg 539  Q
    ||||| |||||||||||||| |||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15040345 gatacttttactgatgggtctgttaaatatacaatgacttcaatgagtgttcctgagcctgtgatgtcattagctgtacagccagtctcaaaagattctg 15040246  T
Q  540 gaggg 544  Q
    |||||    
T  15040245 gaggg 15040241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 15040137 - 15040064
Alignment:
Q  548 ttttcaaaagctttgaaccgcttccaaagagaggatcctactttccgtgttagcttggacccagagagtaggca 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  15040137 ttttcaaaagctttgaaccgcttccaaagagaggatcctactttccgtgttggcttggacccagagagtgggca 15040064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 15044898 - 15044800
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggt 183  Q
    |||| ||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||| ||||||||| ||||||||||| || || |||||||||||    
T  15044898 ggggatacaaccacttctggatggtgtacttagttatttgccatgtccaattgaagttaataattatgcccttgaccaatctaataaggaggagaaggt 15044800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 15044061 - 15043971
Alignment:
Q  180 aggttcagctgactggaagtcccgatgggccccttgtagcattggctttcaagttggagcaaaggaagtttggtcagttaacatatctaag 270  Q
    ||||| ||||| |||| | ||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||    
T  15044061 aggttgagctgcctggtaatcctgatgggccccttgtagcattggctttcaagttggaggaaagtaagtttggtcagctaacatatttaag 15043971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 945 - 1004
Target Start/End: Complemental strand, 15038167 - 15038108
Alignment:
Q  945 ccttgattggacatccagttgaaaatctccgagttgtcttgacagatggtgctgctcatg 1004  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15038167 ccttaattggacatcccgttgaaaatctccgagttgtcttgacagatggtgctgctcatg 15038108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 380 - 435
Target Start/End: Complemental strand, 15041895 - 15041840
Alignment:
Q  380 attgaagaggcccatgctggccaaatagttgctgtatttggtgttgattgtgcatc 435  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15041895 attgatgaggctcatgctggccaaatagttgctgtatttggtgttgattgtgcatc 15041840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 15045633 - 15045570
Alignment:
Q  20 attcgtagggctaccatagcacggaaatttataccggtattcatgggtagtgctgtcaaaaaca 83  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||    
T  15045633 attcgtagggctaccgtggcgcggaaatttataccggtattcatgggtagtgctttcaaaaaca 15045570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 15043854 - 15043792
Alignment:
Q  268 aagagtttatgagggcgtcattcggaagggtgattttattgttaatgttagcactggaaagaa 330  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||||| |||||    
T  15043854 aagaatttatgagggcgtcattcggaagggtgatttcattattaatgttaacactggcaagaa 15043792  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 623 - 677
Target Start/End: Complemental strand, 15039977 - 15039923
Alignment:
Q  623 acaatcatttctggagtgggagaactacacttagatatttatgttaaatgcatta 677  Q
    ||||| ||||||||| |||||||||| ||||||||||| |||||| || ||||||    
T  15039977 acaattatttctggaatgggagaactgcacttagatatctatgttgaacgcatta 15039923  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000006; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 524 - 593
Target Start/End: Complemental strand, 43895598 - 43895529
Alignment:
Q  524 gtctcaaaagattctggagggaaattttcaaaagctttgaaccgcttccaaagagaggatcctactttcc 593  Q
    ||||||||||||||||||||| |||||||||  ||||||||  | || |||||| |||||||||||||||    
T  43895598 gtctcaaaagattctggagggcaattttcaactgctttgaatggttttcaaagaaaggatcctactttcc 43895529  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 524 - 593
Target Start/End: Complemental strand, 44306022 - 44305953
Alignment:
Q  524 gtctcaaaagattctggagggaaattttcaaaagctttgaaccgcttccaaagagaggatcctactttcc 593  Q
    ||||||||||||||||||||| |||||||||  ||||||||  | || |||||| |||||||||||||||    
T  44306022 gtctcaaaagattctggagggcaattttcaagtgctttgaatggttttcaaagaaaggatcctactttcc 44305953  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 44307072 - 44307022
Alignment:
Q  18 caattcgtagggctaccatagcacggaaatttataccggtattcatgggta 68  Q
    ||||||||||||| |||||||||||||||||| ||||  | ||||||||||    
T  44307072 caattcgtagggcaaccatagcacggaaatttgtaccaattttcatgggta 44307022  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 386 - 464
Target Start/End: Original strand, 35856854 - 35856932
Alignment:
Q  386 gaggcccatgctggccaaatagttgctgtatttggtgttgattgtgcatccggcgatacatttactgatgggtcggtta 464  Q
    ||||| |||||||| ||||| |||| ||||| || ||||||||||||| | || || ||||||||||||||||| ||||    
T  35856854 gaggctcatgctggacaaattgttgttgtatgtgatgttgattgtgcaccaggagaaacatttactgatgggtctgtta 35856932  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 33601124 - 33601026
Alignment:
Q  85 gggggtacaaccacttctggatggtgtagttacttatttgccttgtccgattgaagttagtaattatgctcttgaccaatccaagaatgaggagaaggt 183  Q
    |||| ||||||||||| ||||||||||  ||| | ||||||| ||||| | |||||  | ||||||||||||   |||||| ||||||||||| |||||    
T  33601124 ggggctacaaccacttttggatggtgtgcttaataatttgccgtgtccaactgaagcaactaattatgctctcatccaatctaagaatgaggaaaaggt 33601026  T

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