View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18153_low_20 (Length: 448)
Name: NF18153_low_20
Description: NF18153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18153_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 3 - 433
Target Start/End: Original strand, 27839785 - 27840215
Alignment:
| Q |
3 |
cataggtaatatgacaatccatggtacatttggaagcatgagtatcatcgtttcgaattatctttttgttataaaaacaacttttttcaaggcaataaac |
102 |
Q |
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| T |
27839785 |
cataggtaatatgacaatccatggtacatttggaagcatgagtatcatcgtttcgaattatctttttgttataaaaacaacttttttcaaggcaataaac |
27839884 |
T |
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| Q |
103 |
aaggtcgtaccaataaaattgaagatatgttctaaaattaagatttgagcataatttggttcaaagttagtaaaaatcaatttatagaggtatgtatagt |
202 |
Q |
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| T |
27839885 |
aaggtcgtaccaataaaattgaagatatgttctaaaattaagatttgagcataatttggttcaaagctagtaaaaatcaatttatagaggtatgtataat |
27839984 |
T |
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| Q |
203 |
tggcttctttcatgtcttttttgaaagacatttcctatcatgacacttaattaagcaataatgtataccttataatatggacaaacaaaaacaggagaaa |
302 |
Q |
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| T |
27839985 |
tggcttctttcatgtcttttttgaaagacatttcctatcatgacacttaattaagcaataatgtatactttataatatggacaaacaagaacaggagaaa |
27840084 |
T |
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| Q |
303 |
cataactttaattgaattcagaagattatactatacgaacattaaaagcataatgcatatacataattcatactatattgtttgtaaggacttgtctata |
402 |
Q |
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| T |
27840085 |
cataactttaattgaattcagaagattatactatacgaacattaaaagcataatgcatatacataattcatactatattgtttgtaaggacttgtctata |
27840184 |
T |
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| Q |
403 |
atgccaacaaatgtcttgacggaaaaccttt |
433 |
Q |
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| T |
27840185 |
atgccaacaaatgtcttgacggaaaaccttt |
27840215 |
T |
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