View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18153_low_25 (Length: 411)
Name: NF18153_low_25
Description: NF18153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18153_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 18 - 400
Target Start/End: Complemental strand, 44345358 - 44344963
Alignment:
| Q |
18 |
caaaggttttggtaccttgtgacactgcaagcttccttaacattattgttgttgtttccttttgcatatacaatttggctagtatttgttgagagtgaaa |
117 |
Q |
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| T |
44345358 |
caaaggttttggtaccttgtgacactgcaagcttccttaacattattgttgttgtttccttttgcatatacaatttggctagtatttgttgagagtgaaa |
44345259 |
T |
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| Q |
118 |
gaaatactaatagtaaaataaggcgtattgttataatcattttataatatgtagaatgacaacaaagaagattaagggaaatatagtttggtgctaatag |
217 |
Q |
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| T |
44345258 |
gaaatactaatagtaaaataaggcgtattgttataatcattttataatatgtagaatgacaacaaagaagattaagggaaatatagtttggtgctaatag |
44345159 |
T |
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| Q |
218 |
tattaataagagaagggaagagttaggaatactatatatagttatagttactatggtccag------tggagttggagtagtgtgtcatgtttttgtttg |
311 |
Q |
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| T |
44345158 |
tattaataagagaagggaagagttaggaatactatatata------gttactatggtccagtggagttggagttggagtagtgtgtcatgtttttgtttg |
44345065 |
T |
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| Q |
312 |
gttcta-------------tgtcaaaattgattttacgtttaaaattatttcatatttgaatttaagattcatagtttttgacgagttgaatgcctcttc |
398 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
44345064 |
gttctattttttttttaggtgtcaaaattgattttacgtttaaaattatttcatatttgaatttaagattcatagtttttgacgagttgaattcctcttc |
44344965 |
T |
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