View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18153_low_42 (Length: 335)
Name: NF18153_low_42
Description: NF18153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18153_low_42 |
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Alignment Details
Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 163 - 319
Target Start/End: Original strand, 16251056 - 16251212
Alignment:
| Q |
163 |
ctgaaagtattagacaacattagtctttagaccgattagtttagtgcctaaatttttcaaaggaatagtcaataatgtaatcaannnnnnnnacttatat |
262 |
Q |
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| T |
16251056 |
ctgaaagtattagacaacattagtctttagaccgattagttttgtgcctaaatttttcaaaggaatagtcaataatgtaatcaattttttttacttaaat |
16251155 |
T |
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| Q |
263 |
catttttaagatcaaatgtccaactcctatatttttaaaatgataaaattagtattt |
319 |
Q |
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| T |
16251156 |
catttttaagatcaaatgtccaactcctatatttttaaaatgataaaattagtattt |
16251212 |
T |
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