View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18156_high_19 (Length: 479)

Name: NF18156_high_19
Description: NF18156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18156_high_19
NF18156_high_19
[»] chr3 (35 HSPs)
chr3 (11-463)||(1549797-1550249)
chr3 (40-125)||(4987270-4987355)
chr3 (52-125)||(8039826-8039899)
chr3 (63-119)||(7928451-7928507)
chr3 (40-115)||(11665949-11666024)
chr3 (9-113)||(34910324-34910430)
chr3 (52-122)||(17005610-17005680)
chr3 (57-119)||(30994878-30994940)
chr3 (76-125)||(21479113-21479162)
chr3 (57-125)||(34185119-34185187)
chr3 (55-114)||(25948881-25948940)
chr3 (63-114)||(26492207-26492258)
chr3 (63-125)||(8383252-8383314)
chr3 (80-125)||(11610516-11610561)
chr3 (40-113)||(14209120-14209193)
chr3 (74-122)||(4201394-4201442)
chr3 (77-125)||(14979176-14979224)
chr3 (55-119)||(49651780-49651844)
chr3 (52-119)||(1509540-1509607)
chr3 (40-119)||(16192729-16192808)
chr3 (76-119)||(26508111-26508154)
chr3 (63-114)||(28918007-28918058)
chr3 (43-125)||(14829685-14829766)
chr3 (73-119)||(23870571-23870617)
chr3 (75-125)||(25064904-25064954)
chr3 (63-125)||(25093497-25093559)
chr3 (63-117)||(38731221-38731275)
chr3 (74-119)||(10690275-10690320)
chr3 (74-119)||(34307793-34307838)
chr3 (63-119)||(40993337-40993394)
chr3 (40-113)||(41961629-41961702)
chr3 (79-119)||(3164043-3164083)
chr3 (73-125)||(5407259-5407311)
chr3 (61-113)||(29508451-29508503)
chr3 (79-119)||(51206371-51206411)
[»] chr7 (29 HSPs)
chr7 (40-125)||(24339637-24339722)
chr7 (40-125)||(32308115-32308200)
chr7 (40-125)||(26329361-26329446)
chr7 (40-112)||(15902830-15902902)
chr7 (52-114)||(26033452-26033514)
chr7 (75-125)||(29787383-29787433)
chr7 (55-136)||(5548660-5548741)
chr7 (92-125)||(20545267-20545300)
chr7 (76-125)||(25481897-25481946)
chr7 (63-115)||(1401030-1401082)
chr7 (63-115)||(9482939-9482991)
chr7 (63-119)||(20549792-20549848)
chr7 (55-114)||(5409830-5409889)
chr7 (50-112)||(18039006-18039069)
chr7 (55-125)||(1433449-1433519)
chr7 (63-125)||(19206045-19206107)
chr7 (43-112)||(9408316-9408385)
chr7 (52-113)||(11665431-11665492)
chr7 (56-125)||(22602705-22602774)
chr7 (76-125)||(23191891-23191940)
chr7 (76-125)||(24105673-24105722)
chr7 (74-119)||(42720903-42720948)
chr7 (75-115)||(2424619-2424659)
chr7 (52-112)||(7438714-7438774)
chr7 (55-119)||(9778501-9778565)
chr7 (63-119)||(19992002-19992058)
chr7 (63-119)||(26733305-26733361)
chr7 (57-125)||(27945036-27945104)
chr7 (77-125)||(30731032-30731080)
[»] chr6 (42 HSPs)
chr6 (52-139)||(9107361-9107449)
chr6 (63-125)||(7265595-7265657)
chr6 (52-125)||(16766692-16766765)
chr6 (74-127)||(7151405-7151458)
chr6 (52-113)||(9522898-9522959)
chr6 (57-125)||(10770670-10770738)
chr6 (74-125)||(19040347-19040398)
chr6 (52-123)||(34073338-34073409)
chr6 (57-119)||(9025490-9025552)
chr6 (92-125)||(21424833-21424866)
chr6 (58-119)||(24138427-24138488)
chr6 (52-125)||(26562684-26562757)
chr6 (40-112)||(5970087-5970159)
chr6 (51-119)||(7723240-7723308)
chr6 (57-125)||(9027173-9027241)
chr6 (41-113)||(9195734-9195806)
chr6 (74-122)||(30866157-30866205)
chr6 (58-125)||(3398614-3398680)
chr6 (74-125)||(9658874-9658925)
chr6 (78-125)||(10842527-10842574)
chr6 (74-125)||(17341677-17341728)
chr6 (75-122)||(31579239-31579286)
chr6 (56-119)||(32320664-32320727)
chr6 (63-125)||(7938111-7938173)
chr6 (63-125)||(7977832-7977894)
chr6 (55-125)||(12696319-12696389)
chr6 (63-125)||(33001291-33001353)
chr6 (63-113)||(34595141-34595191)
chr6 (74-119)||(1532241-1532286)
chr6 (57-114)||(7086801-7086858)
chr6 (40-113)||(8365498-8365571)
chr6 (76-113)||(8776988-8777025)
chr6 (74-111)||(16388246-16388283)
chr6 (40-125)||(16488569-16488654)
chr6 (76-125)||(17841604-17841653)
chr6 (40-125)||(18367831-18367916)
chr6 (52-125)||(21395299-21395371)
chr6 (76-113)||(31384927-31384964)
chr6 (74-119)||(32511679-32511724)
chr6 (76-124)||(1191715-1191763)
chr6 (63-119)||(13360374-13360430)
chr6 (63-119)||(28715296-28715352)
[»] chr5 (34 HSPs)
chr5 (52-119)||(3966504-3966571)
chr5 (44-119)||(7677706-7677781)
chr5 (63-125)||(28588676-28588738)
chr5 (41-119)||(39698542-39698620)
chr5 (76-125)||(21576760-21576809)
chr5 (74-123)||(12264842-12264891)
chr5 (61-114)||(21194123-21194176)
chr5 (40-125)||(21522745-21522830)
chr5 (40-125)||(21533311-21533396)
chr5 (63-120)||(30502390-30502447)
chr5 (63-120)||(30542733-30542790)
chr5 (41-125)||(15410428-15410512)
chr5 (63-119)||(21191058-21191114)
chr5 (43-111)||(37328826-37328894)
chr5 (55-119)||(38749557-38749621)
chr5 (62-125)||(17177024-17177087)
chr5 (52-119)||(32766934-32767001)
chr5 (42-113)||(40131628-40131699)
chr5 (71-117)||(5467988-5468034)
chr5 (63-113)||(6247629-6247679)
chr5 (55-125)||(31084318-31084388)
chr5 (74-119)||(6471902-6471947)
chr5 (76-125)||(14674264-14674313)
chr5 (92-125)||(17123043-17123076)
chr5 (40-113)||(21542037-21542110)
chr5 (40-125)||(21814256-21814341)
chr5 (55-112)||(23015983-23016040)
chr5 (76-125)||(24906316-24906365)
chr5 (76-125)||(27932230-27932279)
chr5 (58-119)||(36838544-36838605)
chr5 (57-125)||(2436917-2436985)
chr5 (41-125)||(19579696-19579780)
chr5 (63-119)||(42893361-42893417)
chr5 (55-119)||(43001801-43001865)
[»] chr4 (28 HSPs)
chr4 (40-125)||(22234869-22234955)
chr4 (52-125)||(7012061-7012134)
chr4 (40-118)||(30982857-30982935)
chr4 (41-118)||(903924-904001)
chr4 (61-122)||(29205442-29205503)
chr4 (74-125)||(36635319-36635370)
chr4 (56-102)||(19312353-19312399)
chr4 (63-113)||(54580025-54580075)
chr4 (9-113)||(4383375-4383479)
chr4 (74-119)||(8423731-8423776)
chr4 (76-125)||(11596367-11596416)
chr4 (75-123)||(16189706-16189754)
chr4 (75-110)||(24999054-24999089)
chr4 (40-119)||(38148704-38148783)
chr4 (74-125)||(40613445-40613496)
chr4 (57-119)||(7727955-7728017)
chr4 (75-117)||(16184820-16184862)
chr4 (63-125)||(23292988-23293050)
chr4 (76-114)||(28964263-28964301)
chr4 (40-125)||(5414151-5414236)
chr4 (63-120)||(6863153-6863210)
chr4 (74-119)||(15029766-15029811)
chr4 (40-113)||(19482675-19482748)
chr4 (74-119)||(22440613-22440658)
chr4 (74-119)||(23861444-23861489)
chr4 (55-119)||(3947760-3947824)
chr4 (55-139)||(12895110-12895194)
chr4 (63-119)||(21945504-21945560)
[»] chr2 (29 HSPs)
chr2 (63-125)||(31018585-31018647)
chr2 (41-119)||(44860321-44860399)
chr2 (74-126)||(28677903-28677955)
chr2 (40-113)||(12668402-12668475)
chr2 (57-125)||(18420430-18420498)
chr2 (74-125)||(21616757-21616808)
chr2 (72-118)||(25846743-25846789)
chr2 (40-114)||(30717509-30717583)
chr2 (75-139)||(28412330-28412395)
chr2 (76-139)||(21374714-21374778)
chr2 (43-111)||(37419752-37419820)
chr2 (61-125)||(39279670-39279734)
chr2 (64-119)||(23718027-23718082)
chr2 (64-119)||(24105699-24105754)
chr2 (75-148)||(16069268-16069342)
chr2 (75-125)||(21782832-21782882)
chr2 (76-141)||(30404865-30404931)
chr2 (61-119)||(31808078-31808136)
chr2 (63-117)||(34691807-34691861)
chr2 (63-117)||(34714219-34714273)
chr2 (63-112)||(15972881-15972930)
chr2 (40-89)||(35056899-35056948)
chr2 (74-123)||(35449510-35449559)
chr2 (74-119)||(37411257-37411302)
chr2 (63-119)||(2438721-2438777)
chr2 (75-119)||(18276522-18276566)
chr2 (75-119)||(36409641-36409685)
chr2 (76-139)||(39323244-39323308)
chr2 (63-119)||(42832278-42832334)
[»] chr1 (55 HSPs)
chr1 (71-125)||(398775-398829)
chr1 (63-125)||(36878456-36878518)
chr1 (40-125)||(40917746-40917829)
chr1 (7-116)||(44482234-44482337)
chr1 (55-119)||(1486703-1486767)
chr1 (9-139)||(5376453-5376579)
chr1 (45-119)||(17754312-17754386)
chr1 (40-125)||(9828039-9828124)
chr1 (57-125)||(6427345-6427413)
chr1 (41-125)||(25361881-25361965)
chr1 (63-119)||(40181872-40181928)
chr1 (40-112)||(47989505-47989577)
chr1 (74-125)||(5898279-5898330)
chr1 (40-119)||(9629879-9629958)
chr1 (76-125)||(113294-113343)
chr1 (52-125)||(10572580-10572653)
chr1 (61-125)||(13997878-13997942)
chr1 (57-113)||(24577182-24577238)
chr1 (42-122)||(36905995-36906075)
chr1 (54-141)||(38503298-38503386)
chr1 (61-112)||(1864880-1864931)
chr1 (52-122)||(10233251-10233322)
chr1 (78-125)||(17831548-17831595)
chr1 (68-119)||(34298437-34298488)
chr1 (52-119)||(34371715-34371781)
chr1 (52-114)||(8010278-8010340)
chr1 (57-119)||(20157346-20157408)
chr1 (63-113)||(37598839-37598888)
chr1 (63-113)||(42359451-42359501)
chr1 (80-125)||(2896140-2896185)
chr1 (56-114)||(5944287-5944347)
chr1 (52-113)||(6332678-6332738)
chr1 (43-112)||(6612153-6612222)
chr1 (52-113)||(12713318-12713379)
chr1 (52-113)||(12717409-12717470)
chr1 (52-119)||(17778550-17778614)
chr1 (71-120)||(24176377-24176426)
chr1 (74-119)||(25098568-25098613)
chr1 (63-112)||(40258935-40258984)
chr1 (53-122)||(40285646-40285715)
chr1 (76-125)||(48450602-48450651)
chr1 (57-113)||(1704988-1705044)
chr1 (74-110)||(2283676-2283712)
chr1 (57-113)||(7918207-7918263)
chr1 (63-119)||(9709821-9709877)
chr1 (77-125)||(12443476-12443524)
chr1 (63-119)||(14332644-14332700)
chr1 (74-114)||(16927198-16927238)
chr1 (63-111)||(18337338-18337386)
chr1 (63-119)||(22515889-22515945)
chr1 (75-123)||(25452162-25452210)
chr1 (76-124)||(31015039-31015087)
chr1 (63-119)||(31672897-31672953)
chr1 (63-119)||(38078663-38078719)
chr1 (63-127)||(39953148-39953212)
[»] chr8 (24 HSPs)
chr8 (39-119)||(4611535-4611615)
chr8 (42-125)||(29510285-29510368)
chr8 (40-113)||(15816108-15816181)
chr8 (41-125)||(22651971-22652055)
chr8 (52-119)||(25566842-25566909)
chr8 (40-113)||(2572035-2572108)
chr8 (52-125)||(11927077-11927150)
chr8 (52-125)||(24362193-24362266)
chr8 (74-119)||(34897086-34897131)
chr8 (40-112)||(11803267-11803339)
chr8 (71-114)||(3025557-3025600)
chr8 (74-125)||(39954292-39954343)
chr8 (63-113)||(4948659-4948709)
chr8 (63-125)||(13844598-13844660)
chr8 (71-125)||(27101510-27101563)
chr8 (74-139)||(36934650-36934716)
chr8 (52-125)||(13436955-13437028)
chr8 (76-125)||(22197757-22197806)
chr8 (76-125)||(30077402-30077451)
chr8 (64-125)||(31236580-31236641)
chr8 (76-113)||(36450769-36450806)
chr8 (61-125)||(7658458-7658522)
chr8 (63-119)||(20679397-20679453)
chr8 (55-123)||(34222944-34223012)
[»] scaffold0123 (1 HSPs)
scaffold0123 (40-119)||(44504-44583)
[»] scaffold1528 (1 HSPs)
scaffold1528 (45-119)||(1036-1110)
[»] scaffold0008 (1 HSPs)
scaffold0008 (40-121)||(263351-263432)
[»] scaffold0223 (1 HSPs)
scaffold0223 (53-125)||(20167-20239)
[»] scaffold0652 (1 HSPs)
scaffold0652 (63-125)||(464-526)
[»] scaffold0103 (1 HSPs)
scaffold0103 (76-125)||(51806-51855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (52-117)||(53183-53248)
[»] scaffold0036 (1 HSPs)
scaffold0036 (40-113)||(9726-9799)
[»] scaffold0003 (1 HSPs)
scaffold0003 (40-125)||(241589-241674)
[»] scaffold0020 (1 HSPs)
scaffold0020 (57-119)||(135308-135370)
[»] scaffold0361 (1 HSPs)
scaffold0361 (76-113)||(14537-14574)
[»] scaffold0066 (1 HSPs)
scaffold0066 (76-125)||(33378-33427)
[»] scaffold0050 (1 HSPs)
scaffold0050 (63-112)||(70286-70335)
[»] scaffold0027 (1 HSPs)
scaffold0027 (76-125)||(46677-46726)
[»] scaffold0004 (1 HSPs)
scaffold0004 (76-125)||(92802-92851)
[»] scaffold0136 (1 HSPs)
scaffold0136 (40-112)||(3828-3900)
[»] scaffold0110 (1 HSPs)
scaffold0110 (57-125)||(28845-28913)
[»] scaffold0019 (1 HSPs)
scaffold0019 (76-125)||(71718-71769)


Alignment Details
Target: chr3 (Bit Score: 421; Significance: 0; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 11 - 463
Target Start/End: Complemental strand, 1550249 - 1549797
Alignment:
Q  11 cacagacactcctcggattagttgtgtcggtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattat 110  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||| ||||| |||| || ||||||||||||||||||| ||||||||||||||||||||    
T  1550249 cacagacactcctcggattaactgtgtcggtgtcgtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattat 1550150  T
Q  111 tagcggtgttggcgtttagtgaccgtgtcatatatgtgcctcatcatagattaaaatgtaaatatgatgctgaactaacaacatttgagtatttaacaca 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1550149 tagcggtgttggcgtttagtgaccgtgtcatatatgtgcctcatcatagattaaaatgtaaatatgatgctgaactaacaacatttgagtatttaacaca 1550050  T
Q  211 ttaacagaaaaaacaaaagccatgtggggttaaatttatacctccagtgataatgtaagggattctgtgagcaccaccaatatagataacatcagaaaga 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1550049 ttaacagaaaaaacaaaagccatgtggggttaaatttatacctccagtgataatgtaagggattctgtgagcaccaccaatatagataacatcagaaaga 1549950  T
Q  311 attccatagagtggtttagccaccataggaagattagcagaatactgtacaagttgcaatattgaagggtccaaattgagattactagccatatgaaaat 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1549949 attccatagagtggtttagccaccataggaagattagcagaatactgtacaagttgcaatattgaagggtccaaattgagattactagccatatgaaaat 1549850  T
Q  411 taagagcaagccaaggaaaacatctaaacccttgtaaccaataaccaaatcca 463  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1549849 taagagcaagccaaggaaaacatctaaacccttgtaaccaataaccaaatcca 1549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 4987270 - 4987355
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||||||||||  |||| | || | ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  4987270 gtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 4987355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 8039826 - 8039899
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| ||||||| || ||||||||||||||||  | | ||||| ||||||||||||||||||||||||    
T  8039826 acaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgt 8039899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 7928507 - 7928451
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||    
T  7928507 acaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 11666024 - 11665949
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcg 115  Q
    |||||||||| |||| | |||| ||||||| || |||||||||||| ||| |||||||||| ||||||||||||||    
T  11666024 gtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcg 11665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 34910430 - 34910324
Alignment:
Q  9 agcacagacactcctcggattagttgtgtc--ggtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaa 106  Q
    ||||| |||||||||||||||||  |||||  |||||| ||||  ||||||| || |||||||  | | ||||||||||||||  |||||||||||||||    
T  34910430 agcacggacactcctcggattagacgtgtcccggtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaa 34910331  T
Q  107 ttattag 113  Q
    |||||||    
T  34910330 ttattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 17005610 - 17005680
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    ||||| |||||||||||| || ||||||||||||||||  | ||||||| |||||||||||| ||||||||    
T  17005610 acaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgttgg 17005680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 30994878 - 30994940
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| ||||| |||||||||||||||| |||||||||| | ||||||||||| ||||    
T  30994878 gacacaacactgatacgtataattacactgaattgtgtgattttcttaaattattagcagtgt 30994940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 21479162 - 21479113
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtcggcgt 21479113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 34185119 - 34185187
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| ||||||| || | |||||||||||||| |||||||||||| ||||||||||| |||| |||||    
T  34185119 gacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgt 34185187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 25948881 - 25948940
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||| ||||| | || ||||||||||||||||  |||||||||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 26492207 - 26492258
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    |||||||||| | |||||||||||||| || |||||||||||||||||||||    
T  26492207 acaccgatacttgtaattacactgaattgtatgattttttcaaattattagc 26492258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 8383314 - 8383252
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || ||||||||||||||||  | ||||||| |||||||||||||||||| |||||    
T  8383314 acaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgt 8383252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 11610561 - 11610516
Alignment:
Q  80 tacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||    
T  11610561 tacactgaattatgtgatttttttaaattattagcggtgttggcgt 11610516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 14209193 - 14209120
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  |||||||||| |||| || || | ||||||||||||||  ||||||||||| ||||||||||    
T  14209193 gtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 4201442 - 4201394
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    |||||||||||| |||  ||||||||||||||||||||| |||||||||    
T  4201442 tataattacacttaattatgtgattttttcaaattattaacggtgttgg 4201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 14979224 - 14979176
Alignment:
Q  77 aattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 14979176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 49651780 - 49651844
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| ||||||| || | |||||||| |||||  ||||||||||||||||||||||| ||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgt 49651844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 1509607 - 1509540
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || ||||||| || | |||||||||| |||  ||||||||||||||||||||||| ||||    
T  1509607 acaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 16192729 - 16192808
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||  |||||||||| ||| | | || ||||||||||||||||  ||| ||||| ||||||||||| ||||||    
T  16192729 gtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgt 16192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 26508154 - 26508111
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagctgtgt 26508111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 28918058 - 28918007
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||| || | ||||||||||||||  |||||||||||||||||||||||    
T  28918058 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 14829766 - 14829685
Alignment:
Q  43 tcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| ||||||||||| ||||||| || | |||||||  |||||  ||||| ||||||||||||||||| |||| |||||    
T  14829766 tcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgt 14829685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 23870571 - 23870617
Alignment:
Q  73 ctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| |||||||||  | ||||||||||||||||||||||||||    
T  23870571 ctataatcacactgaattatatgattttttcaaattattagcggtgt 23870617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 25064954 - 25064904
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||| |||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgt 25064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 25093559 - 25093497
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || |||||||||||||||| |||||||||| |||||| |||| | |||| |||||    
T  25093559 acaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgt 25093497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 38731275 - 38731221
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggt 117  Q
    ||||||| || ||||| ||||||||||  ||||||||||| ||||||||||||||    
T  38731275 acaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 10690275 - 10690320
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||| ||||||||||||||    
T  10690275 tataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 34307793 - 34307838
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 40993337 - 40993394
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtga-ttttttcaaattattagcggtgt 119  Q
    ||||||| || ||||||||||||||||  ||||| |||||| ||||||||||||||||    
T  40993337 acaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgt 40993394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 41961629 - 41961702
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  | |||||||| ||||||| || | ||||||||| ||||  |||||| |||||||||||||||    
T  41961629 gtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattag 41961702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 3164043 - 3164083
Alignment:
Q  79 ttacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgt 3164083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 5407259 - 5407311
Alignment:
Q  73 ctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||| |||||  ||||||||| ||||||| |||||||||| |||||    
T  5407259 ctataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgt 5407311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 29508503 - 29508451
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||| ||| || ||||||||||||||||  | ||||||||||||||||||||    
T  29508503 caacatcgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 51206371 - 51206411
Alignment:
Q  79 ttacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  51206371 ttacactgaattatgtgattttttcaaattattagctgtgt 51206411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 24339722 - 24339637
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| ||||||| || | ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  24339722 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 24339637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 32308200 - 32308115
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| ||||||||||| |||| || || || |||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 32308115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 26329361 - 26329446
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| || |||| || |||||||||||||||| ||||| |||| ||||||||||| || ||| |||||    
T  26329361 gtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgt 26329446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 15902902 - 15902830
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||||||  | |||||||||||||||| || |||||||||||| |||  ||||||||| |||||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 26033452 - 26033514
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    |||||||||| | ||||| || | ||||||||||||||  |||||||||||||||||||||||    
T  26033452 acaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 29787383 - 29787433
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 29787433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 5548741 - 5548660
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgtttagtgaccgt 136  Q
    ||||||| |||| || || ||||||||||||||||  | ||||||| ||||||||| |||||||| ||| ||||||| ||||    
T  5548741 ccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcatttagtgtccgt 5548660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 20545267 - 20545300
Alignment:
Q  92 tgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||||||||||||||||||||    
T  20545267 tgtgattttttcaaattattagcggtgttggcgt 20545300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 25481946 - 25481897
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 25481897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 1401082 - 1401030
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcg 115  Q
    |||||||||| ||||||||||||||||  ||||| ||| ||||||||||||||    
T  1401082 acaccgatacttataattacactgaattatgtgagtttctcaaattattagcg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 9482991 - 9482939
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcg 115  Q
    ||||||| || |||||||||||||||| |||||||||| ||||||||| ||||    
T  9482991 acaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 20549848 - 20549792
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || ||||||||||||||||   |||||||| ||||||||||||||||||    
T  20549848 acaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 5409830 - 5409889
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||| ||||||| || | ||||| ||||||||  |||||||||||||||||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagc 5409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 18039069 - 18039006
Alignment:
Q  50 aaacaccgacacaacaccgatacctataattacactgaatcgtgtgatt-ttttcaaattatta 112  Q
    |||||||||||| ||||||| || | ||||||||||||||  ||||||| ||||||||||||||    
T  18039069 aaacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 1433519 - 1433449
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| ||||||| || |||||||||||  |||  ||||||||| ||||||||||| |||||| |||||    
T  1433519 ccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgt 1433449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 19206107 - 19206045
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || |||||||| | |||||  ||||||||| |||||||||||||||||| |||||    
T  19206107 acaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgt 19206045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 9408316 - 9408385
Alignment:
Q  43 tcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    |||||||  ||||||| || ||||||| || | |||||||||| |||  |||||||||||||||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 11665431 - 11665492
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    |||||||||  ||| ||| || |||||||| |||||||  ||||||||||||||||||||||    
T  11665431 acaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 22602705 - 22602774
Alignment:
Q  56 cgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||| ||||||| || ||||||||||||||||  ||||||||| |||||| |||  |||||| |||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgt 22602774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 23191940 - 23191891
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||   ||||||||| |||||||||||||||||| |||||    
T  23191940 taattacactgaaatatgtgattttctcaaattattagcggtgtcggcgt 23191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 24105722 - 24105673
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||| ||  ||||||||||||||||||| |||| |||||    
T  24105722 taattacactgaatcatgcaattttttcaaattattagctgtgtcggcgt 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 42720903 - 42720948
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| | |||  ||||||||||||||||||||||||||||    
T  42720903 tataattacatttaattatgtgattttttcaaattattagcggtgt 42720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcg 115  Q
    |||||||||||||||  ||||||||| ||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 7438774 - 7438714
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    |||||||||  ||||||| || | |||||||| |||||  |||||||||||||||||||||    
T  7438774 acaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 9778565 - 9778501
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| ||||||| || | |||||| |||||||  ||||||||||||||||||| ||| ||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgt 9778501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 19992058 - 19992002
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || |||||||||||||||   ||||||||| ||||||||||||| ||||    
T  19992058 acaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 26733361 - 26733305
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | |||||| |||||||  ||||||||| ||||||||||||||||||    
T  26733361 acaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 27945104 - 27945036
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| ||||||| || | ||||||||||||||  ||| ||||| |||||||||||| ||||| |||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 27945036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 30731080 - 30731032
Alignment:
Q  77 aattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||  ||||||||| |||||||||| ||||||| |||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgt 30731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 9107361 - 9107449
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtc 139  Q
    |||||||||| ||||||| || | ||||||||||||||  ||||||||||||||||||||||| |||| ||||| |||||| |||||||    
T  9107361 acaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 9107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 7265595 - 7265657
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || ||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  7265595 acaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgt 7265657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 16766765 - 16766692
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| ||||||| || | ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  16766765 acaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 16766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 7151458 - 7151405
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgttt 127  Q
    |||||||||||| |||  |||||||||||||||||||||| |||||||||||||    
T  7151458 tataattacacttaattatgtgattttttcaaattattagaggtgttggcgttt 7151405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 9522959 - 9522898
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    |||||||||||||||||| || | ||||||||||||||  ||||||||||| ||||||||||    
T  9522959 acaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 10770670 - 10770738
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| ||||||| || | ||||||||||||||  ||||||||||||||||||||||  ||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgt 10770738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 19040398 - 19040347
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  19040398 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 19040347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 34073338 - 34073409
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggc 123  Q
    |||||||||| |||||||  | ||||||||||||||||  || |||||| |||||||||||||| |||||||    
T  34073338 acaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggc 34073409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 9025490 - 9025552
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| ||||||| || ||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 21424833 - 21424866
Alignment:
Q  92 tgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||||||||||||||||||||    
T  21424833 tgtgattttttcaaattattagcggtgttggcgt 21424866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 24138488 - 24138427
Alignment:
Q  58 acacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||| ||||| |||||| |||  | ||||||||||||||||||||| ||||    
T  24138488 acacaacaccgatacatataaatacacttaattatatgattttttcaaattattagcagtgt 24138427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 26562757 - 26562684
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| ||| ||| || ||||||||||||||||  ||||||||| ||||||| ||||| |||| |||||    
T  26562757 acaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgt 26562684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 5970087 - 5970159
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||||||  |||||||||| ||||| | |  | ||||||||||||||  |||||||||||||||||||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 7723240 - 7723308
Alignment:
Q  51 aacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||| |||||||||| ||||||||  ||||||  | ||||||| ||||||||||||| ||||    
T  7723240 aacaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgt 7723308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 9027241 - 9027173
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| ||||||| || ||||||||||| ||||  ||||||| | |||||||||||||||||| |||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgt 9027173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 9195734 - 9195806
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    |||||||||| ||||| |||| ||||||| || |||||||||||| |||  ||| ||||| ||||||||||||    
T  9195734 tgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 30866157 - 30866205
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  30866157 tataattacattgaattatgtgattttctcaaattattagcggtgttgg 30866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 3398680 - 3398614
Alignment:
Q  58 acacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||| |||||||||| ||||||||||||||||  | ||| ||||||||||||||||| |||| |||||    
T  3398680 acacgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgt 3398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 9658925 - 9658874
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||| | |||||||||||||||| |||||    
T  9658925 tataattacactgaattatgtgattttcttaaattattagcggtgtcggcgt 9658874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 10842574 - 10842527
Alignment:
Q  78 attacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||| |||  |||||||||||||||||||||||||||| |||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgt 10842527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 17341677 - 17341728
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||| |||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtcggcgt 17341728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 31579239 - 31579286
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    |||||||||||||||  ||||||||| ||||||||||| |||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggtgttgg 31579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 32320664 - 32320727
Alignment:
Q  56 cgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||| |||||||||| |||||| ||| |||||  ||||||||| ||||||||||| ||||||    
T  32320664 cgacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgt 32320727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 7938173 - 7938111
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || |||||||||||| |||  | ||||||||||||||||||||| |||| |||||    
T  7938173 acaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgt 7938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 7977832 - 7977894
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || | ||||||||||||||  ||| ||||||||||||||||||| |||| |||||    
T  7977832 acaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgt 7977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 12696389 - 12696319
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| |||| || || | ||||||||||||||  ||| ||||||||||||||||||| |||| |||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgt 12696319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 33001291 - 33001353
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || |||||||||| | |||  ||||||||||||||||||||||| |||| |||||    
T  33001291 acaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgt 33001353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 34595191 - 34595141
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||||    
T  34595191 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 1532286 - 1532241
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  1532286 tataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 7086858 - 7086801
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||| ||||||| || |||||||||||| |||  ||||||||| |||||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 8365498 - 8365571
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  | |||||||| ||||||| || | ||||||||| ||||  |||||| |||||||||||||||    
T  8365498 gtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattag 8365571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 8776988 - 8777025
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattag 8777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 16388246 - 16388283
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattatt 111  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 16488569 - 16488654
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| ||||||| || ||||||||||||| ||  ||||||||| | |||  |||||| |||| |||||    
T  16488569 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgt 16488654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 17841604 - 17841653
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||  ||||||||||||||||||||||| |||| |||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgt 17841653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 18367916 - 18367831
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| ||||||| || ||||||||||||| ||  ||||||||| | |||  |||||| |||| |||||    
T  18367916 gtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgt 18367831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 21395299 - 21395371
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||| ||||| ||||||| || | |||||||||| |||  ||| ||||| ||||||||||||||||||||||||    
T  21395299 acactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgt 21395371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 31384964 - 31384927
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 32511679 - 32511724
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| | ||||||||||||||||    
T  32511679 tataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 1191715 - 1191763
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcg 124  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||| ||||    
T  1191715 taattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 13360374 - 13360430
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || ||||||||||||||||  ||||||||| |||||||| ||| |||||    
T  13360374 acaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgt 13360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 28715352 - 28715296
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | ||||||||||||||  ||| ||||||||||||||||||| ||||    
T  28715352 acaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgt 28715296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 3966571 - 3966504
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||| ||||| ||||||| || |||||||||||||||| |||||||||| ||||||||||||||||||    
T  3966571 acactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgt 3966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 7677781 - 7677706
Alignment:
Q  44 cgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| |||||||||| ||||||| || | ||||| ||||||||  ||||||||||||||||||||||| ||||    
T  7677781 cgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgt 7677706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 28588676 - 28588738
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| |||||||||||||||||||  ||||||||| ||||||||||| |||||| |||||    
T  28588676 acaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgt 28588738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 39698620 - 39698542
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||  |||||||||| |||| || || | ||||||||||||||  ||||||||||||||||||||||| ||||    
T  39698620 tgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 39698542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 21576760 - 21576809
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagctgtgttggcgt 21576809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 12264842 - 12264891
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggc 123  Q
    ||||||||||||||||| ||| ||||| |||||| |||||||||||||||    
T  12264842 tataattacactgaatcatgtaattttctcaaataattagcggtgttggc 12264891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 21194123 - 21194176
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||| |||||||||||||||||||||  ||||||||| |||||||| ||||    
T  21194123 caacaccaatacctataattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 21522830 - 21522745
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| ||||||| |  | ||||||||||||||  ||| ||||||| ||||||||||| |||| |||||    
T  21522830 gtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgt 21522745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 21533396 - 21533311
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| ||||||| |  | ||||||||||||||  ||| ||||||| ||||||||||| |||| |||||    
T  21533396 gtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgt 21533311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 30502390 - 30502447
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgtt 120  Q
    ||||||| || ||||||||||||||||   |||||||| |||||||||||||||||||    
T  30502390 acaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 30542733 - 30542790
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgtt 120  Q
    ||||||| || ||||||||||||||||   |||||||| |||||||||||||||||||    
T  30542733 acaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 15410428 - 15410512
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||| || |||| |||||||||||| | || ||| ||||||||||||| | | ||||| | |||||||||||||||| |||||    
T  15410428 tgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgt 15410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 21191058 - 21191114
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||||| ||||    
T  21191058 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21191114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 37328826 - 37328894
Alignment:
Q  43 tcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatt 111  Q
    |||||||  |||||||||| ||||||| || | ||||||||||||||  |||||||||| |||||||||    
T  37328826 tcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatt 37328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 38749557 - 38749621
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||| | || |||||||||| |||||  ||| ||||||||||||||||| ||||||    
T  38749557 ccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgt 38749621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 17177024 - 17177087
Alignment:
Q  62 aacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||| || | |||||||| |||||  | ||||||||||||||||||||| ||||||||||    
T  17177024 aacaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgt 17177087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 32766934 - 32767001
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| ||||  | || |||||||||| ||||| ||| |||||| ||||||||||||||||||    
T  32766934 acaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 40131699 - 40131628
Alignment:
Q  42 gtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||  ||| ||| || |||||||||  |||||||| |||||||  ||||||||||||||||||||||    
T  40131699 gtcgtgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 5467988 - 5468034
Alignment:
Q  71 acctataattacactgaatcgtgtgattttttcaaattattagcggt 117  Q
    |||||||||||||||||||  ||||||||| ||||||||||| ||||    
T  5467988 acctataattacactgaattatgtgattttatcaaattattatcggt 5468034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 6247679 - 6247629
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||||    
T  6247679 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 31084388 - 31084318
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| ||| ||| || | |||||||| |||||  ||||||||||||||||||||||| |||| |||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgt 31084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 6471902 - 6471947
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  6471902 tataattacactgaattatgtgattttctcaaattattagccgtgt 6471947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 14674313 - 14674264
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||  ||||||||||||||||||||||| |||| |||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgt 14674264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 17123076 - 17123043
Alignment:
Q  92 tgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||| ||||||||||||||||||||||||    
T  17123076 tgtgattttctcaaattattagcggtgttggcgt 17123043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 21542110 - 21542037
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  |||||||||| ||||||| || | ||||||||||||||  ||| || |||| ||||||||||    
T  21542110 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattag 21542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 21814341 - 21814256
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||||||||| ||||||| || ||||||||||||| ||  ||||||||| | |||  |||||| |||| |||||    
T  21814341 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgt 21814256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 23015983 - 23016040
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    |||| |||||| ||| |||||||||||||||||||  ||||||||| |||||| ||||    
T  23015983 ccgatacaacatcgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 24906316 - 24906365
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||| ||||||||||||||||| | ||||||||||    
T  24906316 taattacactgaattatgtcattttttcaaattattatctgtgttggcgt 24906365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 27932279 - 27932230
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||| ||||| |||||||||||||||||| |||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 27932230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  58 acacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||| ||||||| || |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 2436985 - 2436917
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| ||||||| || |||||| |||  ||||  |||||||||| ||||||||||||||||| |||||    
T  2436985 gacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgt 2436917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 19579780 - 19579696
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||  |||| ||||| ||||||| || | ||||| |||| |||  ||||||||| ||||||||||||| |||| |||||    
T  19579780 tgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgt 19579696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 42893417 - 42893361
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | ||||||||||| ||  ||||||||||||||||||||||| ||||    
T  42893417 acaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 43001865 - 43001801
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||| |||| | || | ||||||||||||||  ||| ||||||||||||||||||| ||||    
T  43001865 ccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgt 43001801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 22234869 - 22234955
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtga-ttttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||| |||||||||| ||||||| || || |||||||||||||  ||||| |||||||||||| |||||||||| |||||    
T  22234869 gtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgt 22234955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 7012134 - 7012061
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||||||||||| || |||||||||  ||| ||||| ||||||||||| |||||| |||||    
T  7012134 acaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgt 7012061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 30982857 - 30982935
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtg 118  Q
    ||||||||||  |||||||||| ||||||| || |||||||||||||||   ||||||||| |||||| ||||||||||    
T  30982857 gtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 904001 - 903924
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtg 118  Q
    ||||||||| |||||||| || | || ||||| ||||||||||||||||  ||||||||| ||||||||||| |||||    
T  904001 tgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 29205503 - 29205442
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    ||||||||| || | ||||||||||||||  ||||||||||||||||||||||| |||||||    
T  29205503 caacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 36635370 - 36635319
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||| |||||||||||| |||||||||||    
T  36635370 tataattacactgaattatgtgattttctcaaattattagtggtgttggcgt 36635319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 19312399 - 19312353
Alignment:
Q  56 cgacacaacaccgatacctataattacactgaatcgtgtgatttttt 102  Q
    |||||| |||||||||| ||||||||||||||||| |||||||||||    
T  19312399 cgacacgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 54580025 - 54580075
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || ||||||||||||||||  ||||||||||||||||||||||    
T  54580025 acaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 4383479 - 4383375
Alignment:
Q  9 agcacagacactcctcggattagttgtgtc-ggtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaat 107  Q
    ||||| |||||||||||||||||  ||||| ||||||||||   |||||||||| |||| || |  | ||||||||||||||  ||||| ||||||||||    
T  4383479 agcacggacactcctcggattaggcgtgtccggtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtga-tttttcaaat 4383381  T
Q  108 tattag 113  Q
    ||||||    
T  4383380 tattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 8423731 - 8423776
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 11596367 - 11596416
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  |||||||||||||||||||||||  |||||||||    
T  11596367 taattacactgaattatgtgattttttcaaattattagctttgttggcgt 11596416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 16189754 - 16189706
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggc 123  Q
    |||||||||||||||  ||||||||| ||||||| ||||||||||||||    
T  16189754 ataattacactgaattatgtgattttctcaaatttttagcggtgttggc 16189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 24999089 - 24999054
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattat 110  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24999089 ataattacactgaattgtgtgattttttcaaattat 24999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 38148704 - 38148783
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| |||||| |||| ||| ||| |  || |||||||||||||  ||||||||| ||||| ||||||||||||    
T  38148704 gtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgt 38148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 40613496 - 40613445
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||| |||||    
T  40613496 tataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgt 40613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 7727955 - 7728017
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||| |||||||| ||||||||||| |||||||| ||| ||||| |||| |||||| ||||||    
T  7727955 gacataacaccgacacctataattatactgaatcatgtcattttctcaacttattatcggtgt 7728017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 16184862 - 16184820
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggt 117  Q
    |||||| |||||||| |||||||||| ||||||||||||||||    
T  16184862 ataatttcactgaattgtgtgattttctcaaattattagcggt 16184820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 23292988 - 23293050
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || | |||||| |||||||  ||||||||||||||||||||||| |||| |||||    
T  23292988 acaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgt 23293050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 28964263 - 28964301
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 5414151 - 5414236
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||| ||||| |||||||||| ||||||||||||| ||  ||||||||| | |||  |||||| |||| |||||    
T  5414151 gtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgt 5414236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 6863210 - 6863153
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgtt 120  Q
    |||||||||| ||||||| ||| ||||  | ||||||||||||||||||| |||||||    
T  6863210 acaccgatacatataattgcaccgaattatatgattttttcaaattattaacggtgtt 6863153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 15029811 - 15029766
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  |||||| |||||||||||||||| ||||    
T  15029811 tataattacactgaattatgtgatattttcaaattattagcagtgt 15029766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 19482748 - 19482675
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    |||||||||| || |||||||| ||||| | || | ||||||||| ||||  |||||| |||||||||||||||    
T  19482748 gtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattag 19482675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 22440613 - 22440658
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||||||||||| ||||||    
T  22440613 tataattacactgaattatgtgattttctcaaattattaacggtgt 22440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 23861444 - 23861489
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| |||||| ||||||||| |||| |||||||||||||    
T  23861444 tataattacattgaatcatgtgattttatcaatttattagcggtgt 23861489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 3947760 - 3947824
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| |||| || || | ||||||||||||||  || |||||||||||||||||||| ||||    
T  3947760 ccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgt 3947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 12895110 - 12895194
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgtttagtgaccgtgtc 139  Q
    ||||||| ||||||| || | |||||||  |||||  ||||||||||||||||||||||| || | ||||| | ||| |||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtcgtgtccgtgtc 12895194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 21945560 - 21945504
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | ||||||||||||||  ||| ||||||||||||||||||| ||||    
T  21945560 acaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgt 21945504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 31018647 - 31018585
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| ||||||||||||||| |||| ||||||||| | ||||||||||||||||||||||    
T  31018647 acaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgt 31018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 44860399 - 44860321
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||| |||||| |||| ||||||| || ||||||||||||||||  || |||||| ||||||||||||||||||    
T  44860399 tgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 28677955 - 28677903
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgtt 126  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  28677955 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtt 28677903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 12668402 - 12668475
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || || |||||||| ||||||| || ||||||||||||||||  ||| ||||||||||||||||||    
T  12668402 gtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 18420430 - 18420498
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||| || ||||||| || |||||  ||||||||| ||||||||||||| ||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgt 18420498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 21616808 - 21616757
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  21616808 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 21616757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 25846789 - 25846743
Alignment:
Q  72 cctataattacactgaatcgtgtgattttttcaaattattagcggtg 118  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  25846789 cctataattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 30717509 - 30717583
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||||||  ||| |||||| ||| ||| || | ||||||||||||||  |||||||||||||||||||||||    
T  30717509 gtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 28412395 - 28412330
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtc 139  Q
    |||||||||||||||  ||||||||| ||||||||||| |||||||| ||| |||||| |||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtc 28412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 21374714 - 21374778
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtc 139  Q
    ||||||||||||||  ||| ||||||||||||||||||| |||| ||||| |||||| |||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 37419820 - 37419752
Alignment:
Q  43 tcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatt 111  Q
    |||||||  |||||||||| ||||||  || | ||||||||||||||  ||||||||||||||||||||    
T  37419820 tcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 39279734 - 39279670
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||| || ||||||||||||||||  | ||||||| ||| ||||||| ||||||||||||    
T  39279734 caacaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgt 39279670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 23718082 - 23718027
Alignment:
Q  64 caccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||| || ||||||||||||||||  ||||| ||| ||||||||||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 24105754 - 24105699
Alignment:
Q  64 caccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||| || ||||||||||||||||  ||||| ||| ||||||||||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 16069268 - 16069342
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtcatatatgtg 148  Q
    |||||||||||||||  | ||||||||| ||||||||| |||||| ||||| | |||| ||||||||||| ||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtcatatctgtg 16069342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 21782832 - 21782882
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||||  ||||||||| ||||||||||||| |||| |||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgt 21782882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 30404865 - 30404931
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtcat 141  Q
    ||||||||||||||  ||||||||||||||||||||| | |||| ||||| | |||| |||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcat 30404931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 31808136 - 31808078
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||| || || ||||||||||||||||  ||||||||| | ||||||||||||||||    
T  31808136 caacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 34691807 - 34691861
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggt 117  Q
    ||||||| || ||||||||||||||||  | ||||||| ||||||||||||||||    
T  34691807 acaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 34714219 - 34714273
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggt 117  Q
    ||||||| || ||||||||||||||||  | ||||||| ||||||||||||||||    
T  34714219 acaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 15972930 - 15972881
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||| || | |||||||||||||| |||| |||||||||||||||||    
T  15972930 acaccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35056948 - 35056899
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaat 89  Q
    ||||||||||  |||||||||| ||||||| || ||||||||||||||||    
T  35056948 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 35449559 - 35449510
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggc 123  Q
    ||||||||||||||||  ||||||||| ||||||||||| | ||||||||    
T  35449559 tataattacactgaattctgtgattttctcaaattattaacagtgttggc 35449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 37411257 - 37411302
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||| |||||||||  ||||||||| ||||||||||||||||||    
T  37411257 tataatcacactgaattatgtgattttctcaaattattagcggtgt 37411302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 2438721 - 2438777
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | ||||||||||||||  ||||||||||| ||||||||||| ||||    
T  2438721 acaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 18276566 - 18276522
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||||||||   |||||||| ||||||||||||||||||    
T  18276566 ataattacactgaattaagtgattttctcaaattattagcggtgt 18276522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 36409641 - 36409685
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||| |||  ||||||||||||||||||| ||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgt 36409685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 39323308 - 39323244
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgttt-agtgaccgtgtc 139  Q
    ||||||||||||||  ||| ||||| |||||||||||||||||| | ||||| |||| |||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 42832278 - 42832334
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || |||||||||||||||   ||| ||||| ||||||||||||||||||    
T  42832278 acaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 398775 - 398829
Alignment:
Q  71 acctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  398775 acctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 398829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 36878518 - 36878456
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| |||||||||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  36878518 acaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgt 36878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 40917829 - 40917746
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| ||||||||||| ||||||| || | |||||||||| |||  ||||||||||||||||||||||| |||| |||||    
T  40917829 gtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttttcaaattattagctgtgtcggcgt 40917746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 44482337 - 44482234
Alignment:
Q  7 ggagcacagacactcctcggattagttgtgtcggtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaa 106  Q
    ||||||| ||||||||||||||||| |||||||      ||||  |||||||||| ||||||| || ||||||||||||||||  ||||||||| |||||    
T  44482337 ggagcacggacactcctcggattagctgtgtcg------tgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaa 44482244  T
Q  107 ttattagcgg 116  Q
    |||| |||||    
T  44482243 ttataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 1486703 - 1486767
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| ||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgt 1486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 5376453 - 5376579
Alignment:
Q  9 agcacagacactcctcggattagttgtgtcggtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaatt 108  Q
    ||||||||||||||||||||||| |||||      ||||||  ||| |||||| ||||||| || | ||||||||||||||  ||| ||||| | |||||    
T  5376453 agcacagacactcctcggattagatgtgtg-----cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaatt 5376547  T
Q  109 attagcggtgttggcgt-ttagtgaccgtgtc 139  Q
    ||||||||||| ||||| |||||| |||||||    
T  5376548 attagcggtgtcggcgtgttagtgtccgtgtc 5376579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 17754386 - 17754312
Alignment:
Q  45 gtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| ||||||||||| |||| || || |||| |||||||||||  ||| ||||||||||||||||||||||||    
T  17754386 gtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgt 17754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 9828124 - 9828039
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  |||| ||||| ||||||| || || |||||||||||||  ||||||||| |||||||||||| ||||| |||||    
T  9828124 gtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgt 9828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 6427413 - 6427345
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| ||||| | || |||||||||| |||||  ||||||||| ||||||||||||||||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgt 6427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 25361965 - 25361881
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||  |||||||||| |||| || || ||||||||||||||||  ||||||||| ||||||||| || ||||| |||||    
T  25361965 tgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 40181928 - 40181872
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  40181928 acaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgt 40181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 47989577 - 47989505
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||||||  |||||||||| ||||||| || | ||||||||||||||  ||||||||||| |||||||||    
T  47989577 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 5898279 - 5898330
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||| |||||    
T  5898279 tataattacactgaattatgtgattttttcagattattagcggtgtcggcgt 5898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 9629879 - 9629958
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||  ||| |||||| ||||||| || |||||| |||||||||  | ||||||| ||||||||||||||||||    
T  9629879 gtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgt 9629958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 113343 - 113294
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 10572580 - 10572653
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| |||||||||||| || | ||||||||| ||||  ||||||||| |||||||||||| ||||| |||||    
T  10572580 acaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgt 10572653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 13997942 - 13997878
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||| || ||||||||||||||||  ||||||||||| |||| |||| |||||| |||||    
T  13997942 caacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgt 13997878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 24577182 - 24577238
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||| ||||||| || | ||||||||||||||  ||||||||||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 36906075 - 36905995
Alignment:
Q  42 gtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    ||||||||  |||| |||||||| || | || ||||||||| ||||||  ||||||||| ||| |||||||||||||||||    
T  36906075 gtcgtgtccgacactgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgttgg 36905995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 38503386 - 38503298
Alignment:
Q  54 accgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtcat 141  Q
    |||||||  ||||||| || |||||||||||||||   | ||||||| |||||||||||||||||| || || |||||| |||||||||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcat 38503298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 1864880 - 1864931
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||||| || ||||||||||||||||  ||||||||| |||||||||||    
T  1864880 caacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 10233322 - 10233251
Alignment:
Q  52 acaccgacac-aacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    |||||||||| ||||| || || ||||||||||||||||  ||||||||| |||| ||||||| ||||||||    
T  10233322 acaccgacaccaacacagacacatataattacactgaattatgtgattttctcaatttattagtggtgttgg 10233251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 17831548 - 17831595
Alignment:
Q  78 attacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgt 17831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 34298488 - 34298437
Alignment:
Q  68 gatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| ||||||||||||||||  ||||||||| |||||||||||| |||||    
T  34298488 gatacgtataattacactgaattatgtgattttctcaaattattagtggtgt 34298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 34371781 - 34371715
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| |||| ||||||| || ||||||||||||||||  ||||||||| || |||||||||||||||    
T  34371781 acaccaacacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 8010278 - 8010340
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    |||||||||||||| ||| || |||||||| |||||||  | | |||||||||||||||||||    
T  8010278 acaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 20157346 - 20157408
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| ||||||| || ||| ||||||||||||  ||||||||| ||| ||||||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 37598888 - 37598839
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || ||||||||||||||||  ||||||||||||||||||||||    
T  37598888 acaccgacacttataattacactgaatt-tgtgattttttcaaattattag 37598839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 42359451 - 42359501
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||||    
T  42359451 acaccgacacttgtaattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 2896140 - 2896185
Alignment:
Q  80 tacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  ||||||||| |||||||||||||||||| |||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgt 2896185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 5944347 - 5944287
Alignment:
Q  56 cgacacaacaccgatacctataattacactgaatcgtgtgatt--ttttcaaattattagc 114  Q
    |||||| ||||||| || ||||||||||||||||  |||||||  ||||||||||||||||    
T  5944347 cgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagc 5944287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 6332738 - 6332678
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||| |||| |||||||||| | ||||||||||||||  ||||| ||||||||||||||||    
T  6332738 acaccaacacgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattag 6332678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 6612153 - 6612222
Alignment:
Q  43 tcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    |||||||  ||| |||||| ||||||| || | ||||||||||||||  ||| |||||||||||||||||    
T  6612153 tcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 12713318 - 12713379
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||| |||||| |||| |||||||||||| |||  ||||||||| | ||||||||||    
T  12713318 acaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 12717409 - 12717470
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||| |||||| |||| |||||||||||| |||  ||||||||| | ||||||||||    
T  12717409 acaccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 17778614 - 17778550
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||| ||||||| || | ||||||||||| ||   |||||||||||||||||||||| ||||    
T  17778614 acaccgacacgacaccgacacttgtaattacactgtat---gtgattttttcaaattattagctgtgt 17778550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 24176377 - 24176426
Alignment:
Q  71 acctataattacactgaatcgtgtgattttttcaaattattagcggtgtt 120  Q
    |||||||||||||||||||  ||| ||||| ||||||||||| |||||||    
T  24176377 acctataattacactgaatgatgttattttctcaaattattatcggtgtt 24176426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 25098568 - 25098613
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||||||||| ||||||||    
T  25098568 tataattacactgaattatgtgattttctcaaattatcagcggtgt 25098613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 40258935 - 40258984
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||| || | ||||||||||||||  |||||||||||||||||||||    
T  40258935 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 40285646 - 40285715
Alignment:
Q  53 caccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttgg 122  Q
    ||||||||| ||| ||| || ||| | ||||||||||  || |||||| |||||||||||||||||||||    
T  40285646 caccgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttgg 40285715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 48450602 - 48450651
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||  ||| ||||||||||||||||||| ||||||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgt 48450651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 1704988 - 1705044
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||| ||||||| || | ||||||| ||||||  ||||||||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 2283712 - 2283676
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattat 110  Q
    |||||||||| |||||| |||||||||||||||||||    
T  2283712 tataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 7918207 - 7918263
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||| |||| || || ||||||||||||||||  ||||||||| ||||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 9709877 - 9709821
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || ||||||||||  ||||  ||||||||| ||||||||||||||||||    
T  9709877 acaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 12443476 - 12443524
Alignment:
Q  77 aattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||  ||||||||| ||||||||||||| |||| |||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgt 12443524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 14332644 - 14332700
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || |||||||||||| |||  ||||||||| |||||||||||| |||||    
T  14332644 acaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 16927198 - 16927238
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  16927198 tataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 18337386 - 18337338
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattatt 111  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||    
T  18337386 acaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 22515889 - 22515945
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | |||||||||| |||  ||||||||||||||||||||||| ||||    
T  22515889 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 25452162 - 25452210
Alignment:
Q  75 ataattacactgaatcgtgtgattttttcaaattattagcggtgttggc 123  Q
    |||||||||||||||  || |||||| ||||||||||||| ||||||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggc 25452210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 31015087 - 31015039
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcg 124  Q
    ||||||||||||||  ||||||||| ||||||||||||| |||| ||||    
T  31015087 taattacactgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 31672897 - 31672953
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | ||||||||||||||   |||||||||||||||||||||| ||||    
T  31672897 acaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgt 31672953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 38078663 - 38078719
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || | |||||||| |||||  ||||||||||||||||||||||| ||||    
T  38078663 acaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgt 38078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 39953148 - 39953212
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgttt 127  Q
    ||||||| || || ||||||||| |||  ||||||||| | |||||||||||||||| |||||||    
T  39953148 acaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgttt 39953212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 4611615 - 4611535
Alignment:
Q  39 ggtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||||||||||  | ||||||||| |||||| || ||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  4611615 ggtgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 29510285 - 29510368
Alignment:
Q  42 gtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||  |||||||||| ||||||| || | |||||| |||||||  ||||||||||||||||||||||| |||| |||||    
T  29510285 gtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgt 29510368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 15816108 - 15816181
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  ||||| |||| ||||||| || |||||||||||| |||  ||||||||||||||||||||||    
T  15816108 gtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 22652055 - 22651971
Alignment:
Q  41 tgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||  |||||||||| ||||||| || | |||||| | |||||  ||||||||||||||||||||||| |||| |||||    
T  22652055 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgt 22651971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 25566909 - 25566842
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| |||| ||||||| || | ||||||||||||||  ||||||||||||||||||||||| ||||    
T  25566909 acaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 25566842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 2572035 - 2572108
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  |||| ||||| ||||||| || | |||||||||| |||  ||||||||||||||||||||||    
T  2572035 gtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 11927077 - 11927150
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||| |||| ||||||| || ||||||||||||||||  ||||||||| ||||||||||| | |||| |||||    
T  11927077 acaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 24362193 - 24362266
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||  || || ||||||||||||||||  ||||||| | |||||||||||||||||| |||||    
T  24362193 acaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgt 24362266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 34897131 - 34897086
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  34897131 tataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 11803339 - 11803267
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||| || |||||| |||||||||| | || ||||||||||||||||  ||||||||| | |||||||||    
T  11803339 gtgtcgtatccaacaccaacacaacaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 3025600 - 3025557
Alignment:
Q  71 acctataattacactgaatcgtgtgattttttcaaattattagc 114  Q
    |||||||||||||||||||  ||||||||| |||||||||||||    
T  3025600 acctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 39954292 - 39954343
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||| |||  ||||||||| |||||||||||||||||| |||||    
T  39954292 tataattacactaaattatgtgattttctcaaattattagcggtgtcggcgt 39954343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 4948709 - 4948659
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||||    
T  4948709 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 13844598 - 13844660
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || |||||||||||| |||  ||||||||| ||||||||||||| |||| |||||    
T  13844598 acaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgt 13844660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 27101563 - 27101510
Alignment:
Q  71 acctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||| |||  |||||||||||||||||||||||||||| |||||    
T  27101563 acctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgt 27101510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 36934716 - 36934650
Alignment:
Q  74 tataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt-ttagtgaccgtgtc 139  Q
    |||||||||| |||||  |||||||||||| ||||||||||||||| | ||| |||||| |||||||    
T  36934716 tataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtc 36934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 13436955 - 13437028
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| ||||||| || | | |||||  |||||  ||||||||||||||||||||||| |||| |||||    
T  13436955 acaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgt 13437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 22197757 - 22197806
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||||||| |||  ||||| ||||||||||||||||| ||||||||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgttggcgt 22197806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 30077402 - 30077451
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  |||||| |||||||||||||||| | ||||||||    
T  30077402 taattacactgaattatgtgatgttttcaaattattagctgcgttggcgt 30077451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 31236580 - 31236641
Alignment:
Q  64 caccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    |||||| || |||||||||| |||||  ||||||||| ||||||||||||| |||| |||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgt 31236641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 36450769 - 36450806
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattag 36450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 7658522 - 7658458
Alignment:
Q  61 caacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||| |  ||||||||||||||||  ||| ||||| |||||||||||| ||||| |||||    
T  7658522 caacaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 20679397 - 20679453
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||||| || |||||||||||||||   ||||||||| |||||||||||| |||||    
T  20679397 acaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgt 20679453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 34223012 - 34222944
Alignment:
Q  55 ccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggc 123  Q
    ||||||| | ||||| || |||||||||||| |||  ||||||||| | |||||||||||| |||||||    
T  34223012 ccgacaccataccgacacatataattacacttaattatgtgattttattaaattattagcgatgttggc 34222944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 44504 - 44583
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    |||| ||||| ||||||||||| | ||||| || ||||||||||||||||  ||||||||| ||||||| ||||||||||    
T  44504 gtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 1110 - 1036
Alignment:
Q  45 gtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| ||||||||||| |||| || || |||| |||||||||||  ||| ||||||||||||||||||||||||    
T  1110 gtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgt 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 263351 - 263432
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttg 121  Q
    ||||||||||  |||||||||| |||| || || ||||||||||||||||  |||| |||| ||||||||||||| ||||||    
T  263351 gtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttg 263432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 20239 - 20167
Alignment:
Q  53 caccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||| |||| || || | ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 20167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 464 - 526
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||| || | ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  464 acaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgt 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 51855 - 51806
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| |||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 51806  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 53248 - 53183
Alignment:
Q  52 acaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggt 117  Q
    ||||||||||  |||||| || ||||||||||||||||  ||||||||| |||||||||| |||||    
T  53248 acaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggt 53183  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 9726 - 9799
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||  ||||| |||| ||||||| || ||||||||||||||||   |||||||| ||||||||||||    
T  9726 gtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 241674 - 241589
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||  ||||| |||| ||||||| ||  ||||||||||| |||  |||||||||| |||||||||||| |||| |||||    
T  241674 gtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgt 241589  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 135308 - 135370
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgt 119  Q
    ||||| ||||||| || ||||||||||| ||||  ||||||||| ||||||||||||| ||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgt 135370  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 14574 - 14537
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattag 113  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattag 14537  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 33378 - 33427
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||| ||||||||||||||||||| |||| |||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgt 33427  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 70335 - 70286
Alignment:
Q  63 acaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||| || ||||||||||||||||  ||| |||||||||||||||||    
T  70335 acaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 46726 - 46677
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||||||||||||||||||||| | |||| |||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgt 46677  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 92851 - 92802
Alignment:
Q  76 taattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||||  ||| ||||| |||||||||||||||||| |||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 92802  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 3828 - 3900
Alignment:
Q  40 gtgtcgtgtcaaacaccgacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattatta 112  Q
    ||||||||||  ||||| |||| |||| || || | ||||||||||||||  ||||||||||| |||||||||    
T  3828 gtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 28913 - 28845
Alignment:
Q  57 gacacaacaccgatacctataattacactgaatcgtgtgattttttcaaattattagcggtgttggcgt 125  Q
    ||||||||||||| || |||||||||| |||||  || |||||| | ||||||||| |||||| |||||    
T  28913 gacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgt 28845  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 71769 - 71718
Alignment:
Q  76 taattacactgaatcgtgtgatt--ttttcaaattattagcggtgttggcgt 125  Q
    |||||||||||||| ||||||||  |||||||||||||||| |||| |||||    
T  71769 taattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgt 71718  T

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