View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18156_high_42 (Length: 337)
Name: NF18156_high_42
Description: NF18156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18156_high_42 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 103 - 318
Target Start/End: Complemental strand, 7646599 - 7646384
Alignment:
| Q |
103 |
aggatctaaaaccaggcattcaaaggtattgagggtttgtctccttatagcttttactatctttatctacactaacataacaatattaagtttttgcatg |
202 |
Q |
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| T |
7646599 |
aggatctaaaaccaggcattcaaaggtattgagggtttgtctccttatagcttttactatctatatctacactaacataacaatattaagtttttgcatg |
7646500 |
T |
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| Q |
203 |
ttctccatatataaaaatcattctcctttatgatggttttatttgattttagttacaaatttccatgatttctaacaattgcaattaagtttaaagtttg |
302 |
Q |
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| T |
7646499 |
ttctccatatataaaaatcattctcctttatgatggttttatttgatttcagttacaaatttccatgatttctaacaattgcaattaagtttaaagtttg |
7646400 |
T |
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| Q |
303 |
attttgatacactatc |
318 |
Q |
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| T |
7646399 |
attttgatacactatc |
7646384 |
T |
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