View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18156_high_62 (Length: 234)
Name: NF18156_high_62
Description: NF18156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18156_high_62 |
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Alignment Details
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 7375213 - 7375073
Alignment:
| Q |
43 |
tacgtaaaaattgctcagtatacgccacaccagcacattaaatgataaaccggtgaaaaaatataattaattttgttagttttataaaaattatgacata |
142 |
Q |
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| T |
7375213 |
tacgtaaaaattgctcagtatacgccactccagcacattaaataataaaccggtgaaaaaatataattaattttgttagttttataaaagttatgacata |
7375114 |
T |
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| Q |
143 |
cttaacaaaattaatttttcactaacaatatgtgaaagaaa |
183 |
Q |
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| T |
7375113 |
cttaacaaaattaatttttcactaacgatatgtgaaagaaa |
7375073 |
T |
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