View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18156_low_72 (Length: 220)
Name: NF18156_low_72
Description: NF18156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18156_low_72 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 38314789 - 38314588
Alignment:
| Q |
1 |
tcacaagctgaataggaaccttcacctttatcaacaaaggaatatatcccattttttggtctttcaatagttgaagttgcattgtaggtccaaaatcagc |
100 |
Q |
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| T |
38314789 |
tcacaagctgaataggaaccttcaccattatcaacaaaggaatatatcccattttttggtctttcaatagttgaagttgcattgtaggtccaaaatcagc |
38314690 |
T |
|
| Q |
101 |
atctcccttcaatatcacatttaaatttgttgtggcatgaccatgttgcaaggtaggagggaaatgccctgaggaaagtatggaccctgaatatgccatg |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38314689 |
atctcccttcaatattacatttaaatttgttgtggcatgaccatgttgcaaggtaggagggaaatgccctgaggaaagtatggaccctgaatatgccatg |
38314590 |
T |
|
| Q |
201 |
ct |
202 |
Q |
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|| |
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| T |
38314589 |
ct |
38314588 |
T |
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