View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18156_low_8 (Length: 628)

Name: NF18156_low_8
Description: NF18156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18156_low_8
NF18156_low_8
[»] chr6 (25 HSPs)
chr6 (160-496)||(21936408-21936744)
chr6 (160-431)||(21937712-21937983)
chr6 (164-414)||(24508664-24508914)
chr6 (164-434)||(20751922-20752192)
chr6 (352-494)||(12909533-12909675)
chr6 (352-494)||(12934640-12934782)
chr6 (160-376)||(24509846-24510064)
chr6 (291-433)||(11183031-11183173)
chr6 (13-100)||(21936799-21936886)
chr6 (161-275)||(21275920-21276034)
chr6 (193-333)||(11183072-11183212)
chr6 (15-100)||(2887490-2887575)
chr6 (15-100)||(2889212-2889297)
chr6 (15-100)||(21275773-21275858)
chr6 (15-100)||(24508947-24509032)
chr6 (15-100)||(24509703-24509788)
chr6 (15-100)||(11183285-11183370)
chr6 (15-100)||(20752237-20752322)
chr6 (13-100)||(21937568-21937655)
chr6 (440-496)||(21276120-21276176)
chr6 (440-496)||(20751881-20751936)
chr6 (291-361)||(21275991-21276061)
chr6 (234-275)||(12909533-12909574)
chr6 (234-275)||(12934640-12934681)
chr6 (391-440)||(21276091-21276140)
[»] chr3 (98 HSPs)
chr3 (159-496)||(29827549-29827885)
chr3 (161-361)||(49784633-49784833)
chr3 (161-275)||(4049955-4050069)
chr3 (161-275)||(10584801-10584915)
chr3 (161-303)||(33702514-33702656)
chr3 (161-275)||(1302187-1302301)
chr3 (161-275)||(4055089-4055203)
chr3 (161-275)||(5481431-5481545)
chr3 (161-275)||(8464897-8465011)
chr3 (161-275)||(10672881-10672995)
chr3 (161-313)||(8458458-8458611)
chr3 (161-273)||(5457956-5458068)
chr3 (161-275)||(6852895-6853009)
chr3 (161-275)||(6857998-6858112)
chr3 (161-275)||(10591238-10591352)
chr3 (161-275)||(31076345-31076459)
chr3 (161-275)||(31081450-31081564)
chr3 (15-100)||(5458131-5458216)
chr3 (15-100)||(5481607-5481692)
chr3 (15-100)||(6858174-6858259)
chr3 (15-100)||(8458311-8458396)
chr3 (15-100)||(8464750-8464835)
chr3 (15-100)||(20891059-20891144)
chr3 (13-100)||(3187573-3187660)
chr3 (15-100)||(1302364-1302449)
chr3 (15-100)||(4049807-4049892)
chr3 (15-100)||(6853071-6853156)
chr3 (15-92)||(10591422-10591499)
chr3 (15-100)||(10673057-10673142)
chr3 (15-100)||(10678172-10678257)
chr3 (15-100)||(31076521-31076606)
chr3 (15-100)||(33703299-33703384)
chr3 (15-100)||(4054941-4055026)
chr3 (161-275)||(10677994-10678110)
chr3 (15-100)||(31081626-31081711)
chr3 (15-100)||(33702719-33702804)
chr3 (13-100)||(18024267-18024354)
chr3 (15-92)||(10584985-10585062)
chr3 (291-396)||(49784704-49784809)
chr3 (13-100)||(49784494-49784581)
chr3 (391-496)||(18023914-18024020)
chr3 (15-100)||(29827429-29827509)
chr3 (440-499)||(6852750-6852809)
chr3 (440-499)||(10584656-10584715)
chr3 (440-499)||(33702397-33702456)
chr3 (161-220)||(33703447-33703506)
chr3 (440-498)||(8465097-8465155)
chr3 (169-231)||(20891182-20891244)
chr3 (440-496)||(4050155-4050211)
chr3 (440-496)||(4055289-4055345)
chr3 (440-496)||(5481289-5481345)
chr3 (440-496)||(6857856-6857912)
chr3 (440-496)||(10672739-10672795)
chr3 (440-496)||(10677852-10677908)
chr3 (440-499)||(1302042-1302101)
chr3 (232-279)||(18024086-18024133)
chr3 (442-496)||(269526-269580)
chr3 (440-494)||(20891496-20891550)
chr3 (440-496)||(8458659-8458715)
chr3 (440-492)||(10591100-10591152)
chr3 (440-496)||(31076201-31076257)
chr3 (440-496)||(31081308-31081364)
chr3 (291-350)||(20891354-20891413)
chr3 (440-499)||(49784893-49784952)
chr3 (170-230)||(18024168-18024228)
chr3 (440-499)||(5457814-5457868)
chr3 (391-494)||(18023324-18023427)
chr3 (291-350)||(20891281-20891340)
chr3 (232-275)||(20891354-20891397)
chr3 (291-361)||(1302160-1302230)
chr3 (291-361)||(4050026-4050096)
chr3 (291-361)||(4055160-4055230)
chr3 (291-361)||(10672854-10672924)
chr3 (291-361)||(10677967-10678037)
chr3 (291-361)||(31076318-31076388)
chr3 (291-361)||(31081423-31081493)
chr3 (422-498)||(31018015-31018090)
chr3 (291-361)||(5481404-5481474)
chr3 (291-361)||(6852868-6852938)
chr3 (291-361)||(6857971-6858041)
chr3 (291-361)||(8458530-8458600)
chr3 (291-361)||(10584774-10584844)
chr3 (291-361)||(10591211-10591281)
chr3 (350-392)||(20891354-20891396)
chr3 (398-440)||(20891474-20891516)
chr3 (291-361)||(33702515-33702585)
chr3 (391-440)||(4050126-4050175)
chr3 (391-440)||(4055260-4055309)
chr3 (391-440)||(5481325-5481374)
chr3 (391-440)||(6852789-6852838)
chr3 (391-440)||(6857892-6857941)
chr3 (391-440)||(8465068-8465117)
chr3 (391-440)||(10584695-10584744)
chr3 (391-440)||(10591132-10591181)
chr3 (391-440)||(10672775-10672824)
chr3 (391-440)||(10677888-10677937)
chr3 (391-440)||(49784864-49784913)
chr3 (232-284)||(20891281-20891333)
[»] chr5 (43 HSPs)
chr5 (159-498)||(35368621-35368960)
chr5 (291-496)||(43540564-43540768)
chr5 (161-361)||(2023101-2023300)
chr5 (161-336)||(13556186-13556361)
chr5 (291-440)||(13556141-13556290)
chr5 (159-336)||(43540665-43540839)
chr5 (161-275)||(9872367-9872481)
chr5 (161-275)||(9877482-9877596)
chr5 (161-275)||(39909105-39909219)
chr5 (15-100)||(2022964-2023049)
chr5 (15-100)||(13556424-13556509)
chr5 (180-361)||(43379554-43379730)
chr5 (391-496)||(2024362-2024467)
chr5 (15-100)||(9877658-9877743)
chr5 (15-100)||(35369010-35369095)
chr5 (15-100)||(39903845-39903930)
chr5 (15-100)||(39908958-39909043)
chr5 (15-88)||(9872555-9872628)
chr5 (161-275)||(39903992-39904106)
chr5 (291-392)||(2023171-2023272)
chr5 (15-100)||(4555653-4555738)
chr5 (15-74)||(43378437-43378496)
chr5 (440-496)||(9872225-9872281)
chr5 (440-496)||(9877340-9877396)
chr5 (441-496)||(39909306-39909361)
chr5 (398-496)||(4555920-4556018)
chr5 (164-258)||(43402093-43402187)
chr5 (291-376)||(43379601-43379686)
chr5 (440-496)||(39904192-39904248)
chr5 (232-303)||(2023230-2023301)
chr5 (166-229)||(4555772-4555835)
chr5 (440-496)||(13556105-13556161)
chr5 (396-440)||(24091825-24091869)
chr5 (37-89)||(25184114-25184166)
chr5 (50-97)||(43540881-43540928)
chr5 (291-361)||(9872340-9872410)
chr5 (291-361)||(9877455-9877525)
chr5 (291-361)||(39909176-39909246)
chr5 (504-550)||(42688407-42688453)
chr5 (391-440)||(9872261-9872310)
chr5 (391-440)||(9877376-9877425)
chr5 (442-491)||(24091794-24091843)
chr5 (391-440)||(39904163-39904212)
[»] chr1 (57 HSPs)
chr1 (159-492)||(10186307-10186640)
chr1 (291-490)||(19311031-19311230)
chr1 (291-494)||(13654527-13654730)
chr1 (161-390)||(21431509-21431739)
chr1 (291-483)||(1188029-1188221)
chr1 (159-336)||(19310958-19311135)
chr1 (291-483)||(10185907-10186099)
chr1 (293-494)||(35653036-35653237)
chr1 (161-440)||(43358890-43359169)
chr1 (325-496)||(1188218-1188389)
chr1 (173-336)||(13654468-13654631)
chr1 (159-333)||(1187956-1188130)
chr1 (222-496)||(35626328-35626591)
chr1 (159-318)||(16051330-16051489)
chr1 (15-100)||(10186698-10186783)
chr1 (17-100)||(43358755-43358838)
chr1 (15-100)||(44524141-44524226)
chr1 (161-275)||(3468215-3468329)
chr1 (161-275)||(28574444-28574558)
chr1 (161-275)||(28598456-28598570)
chr1 (15-100)||(17414655-17414740)
chr1 (391-495)||(17414304-17414408)
chr1 (159-275)||(44523974-44524092)
chr1 (15-100)||(35626172-35626257)
chr1 (17-100)||(19310826-19310909)
chr1 (15-100)||(3465473-3465558)
chr1 (15-100)||(3468067-3468152)
chr1 (291-440)||(16051403-16051552)
chr1 (15-100)||(28574297-28574382)
chr1 (15-100)||(28598309-28598394)
chr1 (13-90)||(1187826-1187903)
chr1 (15-90)||(16051206-16051281)
chr1 (196-335)||(35653136-35653275)
chr1 (291-392)||(21431566-21431667)
chr1 (350-479)||(44523889-44524017)
chr1 (232-336)||(10185907-10186011)
chr1 (15-100)||(13654335-13654422)
chr1 (26-100)||(21431791-21431865)
chr1 (409-496)||(21430777-21430863)
chr1 (399-497)||(3696110-3696208)
chr1 (440-496)||(28574644-28574700)
chr1 (440-497)||(3468415-3468472)
chr1 (440-497)||(43359149-43359206)
chr1 (440-496)||(28598656-28598712)
chr1 (13-57)||(29681588-29681632)
chr1 (13-57)||(48366213-48366257)
chr1 (166-220)||(17414566-17414620)
chr1 (168-231)||(3701485-3701548)
chr1 (291-361)||(28574515-28574585)
chr1 (291-361)||(28598527-28598597)
chr1 (328-392)||(10185885-10185949)
chr1 (291-361)||(3468286-3468356)
chr1 (232-313)||(3701370-3701451)
chr1 (391-440)||(28574615-28574664)
chr1 (391-440)||(28598627-28598676)
chr1 (291-336)||(44523972-44524017)
chr1 (291-375)||(3701367-3701451)
[»] chr2 (32 HSPs)
chr2 (162-434)||(716402-716674)
chr2 (291-496)||(42780391-42780596)
chr2 (161-279)||(30283389-30283507)
chr2 (161-322)||(42780320-42780481)
chr2 (159-371)||(20892197-20892408)
chr2 (161-275)||(45120534-45120648)
chr2 (161-275)||(17720469-17720583)
chr2 (15-100)||(716267-716352)
chr2 (161-275)||(14917325-14917439)
chr2 (15-100)||(14917501-14917586)
chr2 (15-100)||(30283560-30283645)
chr2 (389-483)||(20892111-20892205)
chr2 (15-100)||(17720645-17720730)
chr2 (15-100)||(42780184-42780269)
chr2 (15-100)||(45120386-45120471)
chr2 (15-100)||(16284437-16284523)
chr2 (440-496)||(14917183-14917239)
chr2 (440-496)||(17720000-17720056)
chr2 (440-496)||(45120734-45120790)
chr2 (440-498)||(30283249-30283307)
chr2 (196-277)||(16286003-16286084)
chr2 (440-496)||(17720327-17720383)
chr2 (496-612)||(23481924-23482039)
chr2 (440-496)||(39178946-39179002)
chr2 (291-361)||(14917298-14917368)
chr2 (308-395)||(20892232-20892319)
chr2 (291-361)||(17720442-17720512)
chr2 (291-361)||(30283366-30283436)
chr2 (291-361)||(45120605-45120675)
chr2 (391-440)||(14917219-14917268)
chr2 (159-200)||(16284573-16284614)
chr2 (391-440)||(17720363-17720412)
[»] scaffold0005 (3 HSPs)
scaffold0005 (291-496)||(173561-173766)
scaffold0005 (164-336)||(173493-173665)
scaffold0005 (15-88)||(173358-173431)
[»] chr4 (53 HSPs)
chr4 (291-496)||(14643526-14643731)
chr4 (291-496)||(47071609-47071814)
chr4 (164-496)||(3409329-3409662)
chr4 (159-425)||(34279305-34279572)
chr4 (159-437)||(25618089-25618359)
chr4 (291-496)||(22118925-22119130)
chr4 (291-498)||(30019636-30019833)
chr4 (159-323)||(30019743-30019906)
chr4 (161-359)||(32429152-32429350)
chr4 (159-336)||(54859059-54859237)
chr4 (164-336)||(14643627-14643799)
chr4 (159-336)||(22118850-22119029)
chr4 (159-361)||(18670975-18671177)
chr4 (291-432)||(54859022-54859163)
chr4 (223-492)||(18716689-18716958)
chr4 (161-275)||(35091062-35091176)
chr4 (161-275)||(35096175-35096289)
chr4 (15-100)||(18737162-18737247)
chr4 (291-498)||(34601823-34602024)
chr4 (159-336)||(47071530-47071713)
chr4 (13-100)||(18670838-18670925)
chr4 (15-100)||(32429402-32429487)
chr4 (14-100)||(34128356-34128442)
chr4 (15-100)||(18716489-18716574)
chr4 (291-396)||(32429174-32429279)
chr4 (15-100)||(35096028-35096113)
chr4 (223-492)||(18737362-18737634)
chr4 (15-98)||(54859278-54859361)
chr4 (15-100)||(30019969-30020054)
chr4 (15-88)||(35090915-35090988)
chr4 (15-100)||(47071408-47071493)
chr4 (159-258)||(34128220-34128319)
chr4 (15-96)||(3424823-3424904)
chr4 (15-100)||(34279610-34279695)
chr4 (15-88)||(14643861-14643934)
chr4 (291-392)||(18671048-18671149)
chr4 (440-496)||(35091262-35091318)
chr4 (164-230)||(3424698-3424764)
chr4 (440-498)||(35096375-35096433)
chr4 (440-496)||(3424114-3424170)
chr4 (440-496)||(32429034-32429090)
chr4 (319-392)||(3424257-3424330)
chr4 (231-303)||(3424228-3424300)
chr4 (195-334)||(34601928-34602061)
chr4 (291-361)||(35091133-35091203)
chr4 (291-361)||(35096246-35096316)
chr4 (391-440)||(32429070-32429119)
chr4 (451-496)||(34279254-34279299)
chr4 (238-278)||(34601925-34601965)
chr4 (43-99)||(34602065-34602121)
chr4 (381-440)||(34128159-34128218)
chr4 (291-361)||(3424229-3424299)
chr4 (391-440)||(35091233-35091282)
[»] scaffold0006 (3 HSPs)
scaffold0006 (291-494)||(144288-144491)
scaffold0006 (173-336)||(144229-144392)
scaffold0006 (15-100)||(144096-144183)
[»] chr8 (46 HSPs)
chr8 (173-380)||(25953012-25953220)
chr8 (159-334)||(18608534-18608708)
chr8 (291-493)||(18608435-18608636)
chr8 (161-497)||(10340697-10341024)
chr8 (496-612)||(15207147-15207263)
chr8 (161-334)||(43956734-43956907)
chr8 (496-612)||(15201390-15201506)
chr8 (291-438)||(43956689-43956836)
chr8 (161-275)||(26981818-26981932)
chr8 (161-275)||(34108378-34108492)
chr8 (161-275)||(14314854-14314968)
chr8 (161-275)||(14318558-14318672)
chr8 (161-275)||(26986932-26987046)
chr8 (13-100)||(10341076-10341163)
chr8 (161-275)||(18494120-18494233)
chr8 (15-100)||(34108229-34108314)
chr8 (15-100)||(14315030-14315115)
chr8 (15-100)||(14318734-14318819)
chr8 (15-100)||(18494295-18494380)
chr8 (15-100)||(26981995-26982080)
chr8 (15-100)||(26987108-26987193)
chr8 (16-87)||(18885065-18885136)
chr8 (17-100)||(43956968-43957051)
chr8 (15-100)||(18608747-18608832)
chr8 (15-100)||(25953278-25953363)
chr8 (159-258)||(1781963-1782062)
chr8 (341-496)||(1782083-1782237)
chr8 (442-496)||(14314712-14314766)
chr8 (440-497)||(43956650-43956707)
chr8 (440-496)||(14318416-14318472)
chr8 (440-496)||(26981676-26981732)
chr8 (440-496)||(26986790-26986846)
chr8 (440-496)||(34108578-34108634)
chr8 (440-496)||(18493978-18494034)
chr8 (291-361)||(14314827-14314897)
chr8 (291-361)||(14318531-14318601)
chr8 (291-361)||(26986905-26986975)
chr8 (394-457)||(25952305-25952368)
chr8 (291-361)||(18494093-18494163)
chr8 (291-361)||(26981791-26981861)
chr8 (291-361)||(34108449-34108519)
chr8 (391-440)||(14318452-14318501)
chr8 (391-440)||(18494014-18494063)
chr8 (391-440)||(26981712-26981761)
chr8 (391-440)||(26986826-26986875)
chr8 (391-440)||(34108549-34108598)
[»] chr7 (54 HSPs)
chr7 (159-274)||(4181347-4181462)
chr7 (159-274)||(5440244-5440359)
chr7 (159-274)||(5449254-5449369)
chr7 (161-275)||(12856936-12857050)
chr7 (15-100)||(14610364-14610449)
chr7 (161-275)||(12851823-12851937)
chr7 (161-275)||(26051168-26051282)
chr7 (161-275)||(26056281-26056395)
chr7 (161-275)||(26060527-26060641)
chr7 (161-275)||(26065640-26065754)
chr7 (15-100)||(12851674-12851759)
chr7 (15-100)||(12856789-12856874)
chr7 (15-100)||(26051021-26051106)
chr7 (15-100)||(26056134-26056219)
chr7 (15-100)||(26060380-26060465)
chr7 (15-100)||(26065493-26065578)
chr7 (367-496)||(37459703-37459832)
chr7 (15-100)||(11056625-11056710)
chr7 (419-496)||(2248853-2248930)
chr7 (15-88)||(35352422-35352495)
chr7 (164-280)||(37459801-37459917)
chr7 (13-100)||(37459960-37460047)
chr7 (15-100)||(4181501-4181585)
chr7 (15-100)||(5440407-5440492)
chr7 (15-100)||(5449417-5449502)
chr7 (197-275)||(14610512-14610590)
chr7 (440-496)||(12852023-12852079)
chr7 (440-496)||(12857136-12857192)
chr7 (440-496)||(26051368-26051424)
chr7 (440-496)||(26056481-26056537)
chr7 (440-496)||(26060727-26060783)
chr7 (440-496)||(26065840-26065896)
chr7 (159-303)||(35352235-35352380)
chr7 (442-496)||(4181276-4181330)
chr7 (13-57)||(5436692-5436736)
chr7 (291-333)||(4181347-4181389)
chr7 (291-361)||(12857007-12857077)
chr7 (291-361)||(14610547-14610617)
chr7 (291-361)||(26051239-26051309)
chr7 (291-361)||(26056352-26056422)
chr7 (291-361)||(26060598-26060668)
chr7 (291-361)||(26065711-26065781)
chr7 (451-497)||(35352120-35352166)
chr7 (291-360)||(5440217-5440286)
chr7 (291-360)||(5449227-5449296)
chr7 (291-361)||(12851894-12851964)
chr7 (391-440)||(12857107-12857156)
chr7 (391-440)||(14610647-14610696)
chr7 (391-440)||(26051339-26051388)
chr7 (391-440)||(26056452-26056501)
chr7 (391-440)||(26060698-26060747)
chr7 (391-440)||(26065811-26065860)
chr7 (308-361)||(35352236-35352289)
chr7 (350-410)||(4181329-4181389)
[»] scaffold0223 (4 HSPs)
scaffold0223 (161-275)||(1962-2076)
scaffold0223 (15-100)||(2138-2223)
scaffold0223 (440-496)||(1820-1876)
scaffold0223 (291-361)||(1935-2005)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 160 - 496
Target Start/End: Complemental strand, 21936744 - 21936408
Alignment:
Q  160 aaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaa 259  Q
    |||||||||||||||||  || |||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||||     
T  21936744 aaactaatgcccaaatgttaagcatttatagtgcattatatgacccttcacatgagagaaaacacccctttgacttgaatcaatgttatggtttattaag 21936645  T
Q  260 cacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatca 359  Q
    |||| ||||||||||| ||| |||| || |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  21936644 cacctttttgccaaaggttatgatcatatacacttgaataaattctaaggttcactaaacacccctttgccaaaggtcatgatcatataaacttgaatca 21936545  T
Q  360 attcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttga 459  Q
    || |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||     
T  21936544 atgcaaaggttcattaagcacccatttgccaaaggttcaaatgtatataaaagatttccataaagagttacaactcttggtgaagagttacaacttttgg 21936445  T
Q  460 ttctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  21936444 ttctaaagtgattccattattttggaaatcaccaaca 21936408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 160 - 431
Target Start/End: Original strand, 21937712 - 21937983
Alignment:
Q  160 aaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaa 259  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  21937712 aaactaatgcccaaatgccaaacatttatagtgcgttatatgacccttcacatgagagaaaatacccctttgacttgaatcaatgtgatggttcattaaa 21937811  T
Q  260 cacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatca 359  Q
    |||||||||||||||| ||| |||| || ||||||||||||||| ||| ||| | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  21937812 cacccttttgccaaaggttatgatcatatacacttgaatcaatgataaagttaattaaacaccccttttccaaaggtcatgatcatatacacttgaatca 21937911  T
Q  360 attcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttaca 431  Q
    || |||| ||||||||| ||||| ||||| |||||||||||||||||  ||| ||| |||||||||||||||    
T  21937912 atgcaaatgttcattaaccacccctttgctaaatgttccaatgtatacgaaatattttcatgaagagttaca 21937983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 164 - 414
Target Start/End: Complemental strand, 24508914 - 24508664
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacc 263  Q
    |||||||||||||||||||||||| ||| ||| ||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  24508914 taatgcccaaatgccaaacatttacagtacataatatgacccttctcatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagcacc 24508815  T
Q  264 cttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattc 363  Q
    |||||||||||| ||| ||||||| |||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |    
T  24508814 cttttgccaaaggttatgatcttatacacttgaattaatgctaaggttcattaaacacccctttaccaaaggtcatgatcatatacacttgaatcaatgc 24508715  T
Q  364 aaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagat 414  Q
    ||||||| ||||||| ||| ||| ||||||||| |||| ||||| ||||||    
T  24508714 aaaggtttattaagcgcccatttaccaaatgtttcaatatatatgaaagat 24508664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 164 - 434
Target Start/End: Complemental strand, 20752192 - 20751922
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacc 263  Q
    ||||||| |||||||||  ||||||||||||||| |||||  ||||||||| |||||| || | ||||||||||||||||||||||||||||||| ||||    
T  20752192 taatgcctaaatgccaagtatttatagtgcattagatgacctttcacatgagagaaaacactcatttgacttgaatcaatgttatggttcattaagcacc 20752093  T
Q  264 cttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattc 363  Q
     ||||| ||||| ||| |  | || ||||||||||||||||||||||||| ||| |||||||||| ||||||| || || ||||||||||||| |||| |    
T  20752092 attttgtcaaaggttatggccatatacacttgaatcaatgctaaggttcattaaacacccctttgtcaaaggttataataatatacacttgaaccaatgc 20751993  T
Q  364 aaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaact 434  Q
     |||||| ||||||||||| ||||| ||| |||  ||||||||| |||| |||||||||||||||||||||    
T  20751992 taaggtttattaagcacccatttgctaaaggttataatgtatatgaaaggttctcatgaagagttacaact 20751922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 352 - 494
Target Start/End: Original strand, 12909533 - 12909675
Alignment:
Q  352 ttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttaca 451  Q
    |||||||||| | |||||||||||| |||| |||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  12909533 ttgaatcaatgctaaggttcattaaacacctttttgccaaaggttccaatgtatatgaatgattctcatgaaaagttacaactcttggtgaagagttaca 12909632  T
Q  452 acttttgattctaaagtaattccattattttgaaaatcaccaa 494  Q
    ||||||| ||||||||| |||||||||||||  ||||||||||    
T  12909633 acttttggttctaaagtgattccattattttagaaatcaccaa 12909675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 352 - 494
Target Start/End: Original strand, 12934640 - 12934782
Alignment:
Q  352 ttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttaca 451  Q
    |||||||||| | |||||||||||| |||| |||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  12934640 ttgaatcaatgctaaggttcattaaacacctttttgccaaaggttccaatgtatatgaatgattctcatgaaaagttacaactcttggtgaagagttaca 12934739  T
Q  452 acttttgattctaaagtaattccattattttgaaaatcaccaa 494  Q
    ||||||| ||||| ||| |||||||||||||| ||||||||||    
T  12934740 acttttggttctagagtgattccattattttggaaatcaccaa 12934782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 160 - 376
Target Start/End: Original strand, 24509846 - 24510064
Alignment:
Q  160 aaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaa 259  Q
    ||||||||||||||||| ||| |||||||||||||||||||||  |||||||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  24509846 aaactaatgcccaaatgtcaagcatttatagtgcattatatgaaccttcacatgagagaaaacacccatttgacttgaatcaatgttatggttcattaaa 24509945  T
Q  260 cacccttttgccaaagattacg---atcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaa 356  Q
    ||| |||||| ||||  ||| |   ||| || |||||||||| |||| ||||||||| |||  |||| |||| ||||| ||||||| |||||||||||||    
T  24509946 cacacttttgtcaaatgttatgatcatcatatacacttgaattaatgttaaggttcattaa-tacccttttgtcaaagatcatgattatatacacttgaa 24510044  T
Q  357 tcaattcaaaggttcattaa 376  Q
    | |||   ||||||||||||    
T  24510045 ttaatgttaaggttcattaa 24510064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 291 - 433
Target Start/End: Complemental strand, 11183173 - 11183031
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||| || || |||||| ||| || ||||||| ||||||| |||||||||||||||||||||||  | ||||||||||||| |||| |||||||    
T  11183173 acttgaatcagtgttatggttcattaaacatccctttgtcaaaggttatgatcatatacacttgaatcaaggctaaggttcattaagtacccctttgcca 11183074  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaac 433  Q
    ||||||||||||||||| |||||||  ||||||||||||||||    
T  11183073 aatgttccaatgtatatgaaagatttccatgaagagttacaac 11183031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 21936886 - 21936799
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||    
T  21936886 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatagatgatttagagtatgagaatgatggagaatta 21936799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 21275920 - 21276034
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  21275920 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 21276019  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  21276020 acccttttgccaaag 21276034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 193 - 333
Target Start/End: Complemental strand, 11183212 - 11183072
Alignment:
Q  193 cattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacac 292  Q
    ||||||||||  |||||||||  |||| | |||| |||||||||||||| ||||||||||||||||||| || |||| ||||| ||| |||| || ||||    
T  11183212 cattatatgagccttcacatgggagaacacacccatttgacttgaatcagtgttatggttcattaaacatccctttgtcaaaggttatgatcatatacac 11183113  T
Q  293 ttgaatcaatgctaaggttcactaagcacccctttgccaaa 333  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  11183112 ttgaatcaaggctaaggttcattaagtacccctttgccaaa 11183072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 2887490 - 2887575
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||||||    
T  2887490 tattttacagatttatgattccagcaattcactcatgcattagagagttgatggatgatttagagtaagagaatgagggagaatta 2887575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 2889212 - 2889297
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||| |||||||||    
T  2889212 tattttacagatttatgattccagcaattcactcatgcattagagagttgatgaatgatttagagtaagagaatgagggagaatta 2889297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 21275773 - 21275858
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  21275773 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 21275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 24509032 - 24508947
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  24509032 tattttacaaatttatgattccaacaattcactcatgcattagagaattgatggatgatttagagtaaaagaatgatggagaatta 24508947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 24509703 - 24509788
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  24509703 tattttacaaatttatggttccaacaattcactaatgcattagagaattgatggatgatttaaagtaaaagaatgatggagaatta 24509788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 11183370 - 11183285
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||    
T  11183370 tattttacaggtttatggtttcagcaatttactcatgcattagagaattgattgatgatttagagtaagagaatgagagagaatta 11183285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 20752322 - 20752237
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  | ||| |||||||||||| || |||||||    
T  20752322 tattttacagatttatggttccaacaattcactcatgcatcagagaattgatggatgacttatagtaagagaatggtgaagaatta 20752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 21937568 - 21937655
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||   |||||| ||||||| ||||||| |||||    
T  21937568 aatattatacaaatttatggttccagcaattcactcatgcatttgagaattgatggatgttttagaataagagagtgatggaaaatta 21937655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 21276120 - 21276176
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  21276120 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 21276176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 20751936 - 20751881
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||    
T  20751936 tgaagagttacaacttttgat-ctaaagtgaatccattattttggaaatcaccaaca 20751881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 21275991 - 21276061
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  21275991 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 21276061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 12909533 - 12909574
Alignment:
Q  234 ttgaatcaatgttatggttcattaaacacccttttgccaaag 275  Q
    ||||||||||| || ||||||||||||||| |||||||||||    
T  12909533 ttgaatcaatgctaaggttcattaaacacctttttgccaaag 12909574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 12934640 - 12934681
Alignment:
Q  234 ttgaatcaatgttatggttcattaaacacccttttgccaaag 275  Q
    ||||||||||| || ||||||||||||||| |||||||||||    
T  12934640 ttgaatcaatgctaaggttcattaaacacctttttgccaaag 12934681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 21276091 - 21276140
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  21276091 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 21276140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 159 - 496
Target Start/End: Original strand, 29827549 - 29827885
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  29827549 caaactaatgcccaaatgccaagcatttataatgcattatatgact-ttcacatgatagaaaacacccctttgacttgaatcaatgttatgattcattaa 29827647  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
     |||| ||||||||||||||| || | || ||||||||||||||||||||||||| ||||||||  |||| |||| || || ||||||||||||||||||    
T  29827648 gcaccattttgccaaagattatgaccatacacacttgaatcaatgctaaggttcattaagcaccaatttgtcaaatgttataatcatatacacttgaatc 29827747  T
Q  359 aattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttg 458  Q
    ||| |||||||||||||| ||||  ||||||||| |||||||| ||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  29827748 aatgcaaaggttcattaaacacctgtttgccaaaggttccaatctatatgaaagattcccatgcagaattacaactcttggtgaagagttacaacttttg 29827847  T
Q  459 attctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||||| |||||||| ||||| ||||||||||||    
T  29827848 attctaaagtgattccattcttttggaaatcaccaaca 29827885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 49784633 - 49784833
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||| |||||||| |    
T  49784633 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacactcatttgacttgaatcaatgttatgattcattaagc 49784732  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaa 360  Q
    |||| |||||||||| ||| |||| || ||||||||||||||| || |||| | || |||||| ||||||||| || || | ||||||||||||||||||    
T  49784733 acccatttgccaaagcttatgatcatatacacttgaatcaatgatatggtttattatgcacccttttgccaaatgttataaccatatacacttgaatcaa 49784832  T
Q  361 t 361  Q
    |    
T  49784833 t 49784833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 4049955 - 4050069
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||  ||| |||||||| |    
T  4049955 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaagc 4050054  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  4050055 acccttttgccaaag 4050069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 10584915 - 10584801
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||  ||| |||||||| |    
T  10584915 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaagc 10584816  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  10584815 acccttttgccaaag 10584801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 303
Target Start/End: Complemental strand, 33702656 - 33702514
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  33702656 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 33702557  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatg 303  Q
    ||||||||||||||| |||  | |||| | |||||||||||||    
T  33702556 acccttttgccaaaggttataaccttatatacttgaatcaatg 33702514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 1302301 - 1302187
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  1302301 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 1302202  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  1302201 acccttttgccaaag 1302187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 4055089 - 4055203
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  4055089 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 4055188  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  4055189 acccttttgccaaag 4055203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 5481545 - 5481431
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||| ||| |||||||| |    
T  5481545 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgtcatgattcattaagc 5481446  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  5481445 acccttttgccaaag 5481431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 8464897 - 8465011
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||| ||| |||||||| |    
T  8464897 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgtcatgattcattaagc 8464996  T
Q  261 acccttttgccaaag 275  Q
    ||| |||||||||||    
T  8464997 accattttgccaaag 8465011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 10672995 - 10672881
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  10672995 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 10672896  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  10672895 acccttttgccaaag 10672881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 161 - 313
Target Start/End: Original strand, 8458458 - 8458611
Alignment:
Q  161 aactaatgcccaaa-tgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaa 259  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||  ||| ||||||||     
T  8458458 aactaatgcccaaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaac 8458557  T
Q  260 cacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttca 313  Q
    |||||||||||||||| |||  | | || | ||||||||||||| || ||||||    
T  8458558 cacccttttgccaaaggttataaccatatatacttgaatcaatgttatggttca 8458611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 5458068 - 5457956
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||| ||| |||||||| |    
T  5458068 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgtcatgattcattaagc 5457969  T
Q  261 acccttttgccaa 273  Q
    |||||||||||||    
T  5457968 acccttttgccaa 5457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 6853009 - 6852895
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| ||||| || |    
T  6853009 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcatcaagc 6852910  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  6852909 acccttttgccaaag 6852895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 6858112 - 6857998
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| ||||| || |    
T  6858112 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaatcacctctttaacttgaatcaatgccatgattcatcaagc 6858013  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  6858012 acccttttgccaaag 6857998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 10591352 - 10591238
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  10591352 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 10591253  T
Q  261 acccttttgccaaag 275  Q
    |||||||| ||||||    
T  10591252 acccttttaccaaag 10591238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 31076459 - 31076345
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  31076459 aactaatgcccaaatgtcaagcatttataatgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 31076360  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  31076359 acccttttgccaaag 31076345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 31081564 - 31081450
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  31081564 aactaatgcccaaatgtcaagcatttataatgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 31081465  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  31081464 acccttttgccaaag 31081450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5458216 - 5458131
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  5458216 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 5458131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5481692 - 5481607
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  5481692 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 5481607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 6858259 - 6858174
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  6858259 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 6858174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 8458311 - 8458396
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  8458311 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 8458396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 8464750 - 8464835
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  8464750 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 8464835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 20891059 - 20891144
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||||    
T  20891059 tattttatagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagagtaagcgaatgagggagaatta 20891144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 3187660 - 3187573
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||  ||||||||||||||||||| |||||||||    
T  3187660 aatattttacagatttatggttcgagcaattcactcatgcattaaagaattgatagatgatttagagtaagagaatgagggagaatta 3187573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 1302449 - 1302364
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  1302449 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 1302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 4049807 - 4049892
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  4049807 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 4049892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 6853156 - 6853071
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  6853156 tattttacagatttatggttccagcaattcactcgtgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 6853071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 10591499 - 10591422
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatg 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||    
T  10591499 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatg 10591422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 10673142 - 10673057
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  10673142 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 10673057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 10678257 - 10678172
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  10678257 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 10678172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 31076606 - 31076521
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  31076606 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 31076521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 33703299 - 33703384
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  33703299 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 33703384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 4054941 - 4055026
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||| |||||| || |||||||    
T  4054941 tattttacagatttatggttccagcaattcactcatgcattaaagaattgatggatgatttagaataatagaatggtgaagaatta 4055026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 10678110 - 10677994
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatg--actcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||| |||||  |||  ||| |||||||||||||  ||| ||||||||    
T  10678110 aactaatgcccaaatgtcaagcatttatagtgcattatatgtgactcttcacatgaaagaaagcacctttttaacttgaatcaatgccatgattcattaa 10678011  T
Q  259 acacccttttgccaaag 275  Q
     ||||||||||||||||    
T  10678010 gcacccttttgccaaag 10677994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 31081711 - 31081626
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  31081711 tattttacagatttatggttccaacaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 31081626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 33702804 - 33702719
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  33702804 tattttacatatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 33702719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 18024354 - 18024267
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||| |||| | ||||||| ||||||||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  18024354 aatattttacagatttattgttctaacaattcattcatgcattagagaattgatgaatgatttagagtaagagaatgagggagaatta 18024267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 10585062 - 10584985
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatg 92  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||| ||| |||||||||    
T  10585062 tattttacagatttatggttctagctattcactcatgcattagagaattgatggatgatttagaataatagaatgatg 10584985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 49784704 - 49784809
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || | |||| ||||||||| |||||||||| | ||||||||||||||||||||||||   | |||| |||| ||||||||||||||    
T  49784704 acttgaatcaatgttatgattcattaagcacccatttgccaaagcttatgatcatatacacttgaatcaatgatatggtttattatgcacccttttgcca 49784803  T
Q  391 aatgtt 396  Q
    ||||||    
T  49784804 aatgtt 49784809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 49784494 - 49784581
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| ||||| ||||||| || ||||||    
T  49784494 aatattttccagatttatggttccagcaattcactcatgaattagagaattgatagatgatttaaagtaaaagaatgagggggaatta 49784581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 496
Target Start/End: Complemental strand, 18024020 - 18023914
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaac-tcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatc 489  Q
    ||||||||||||||||| |  |||||  ||||||||||||||| | |||||||  |||||||||||||| || |||||| |||||||||||||| |||||    
T  18024020 aatgttccaatgtatatgattgattcctatgaagagttacaaccttttggtgattagttacaacttttggttataaagtgattccattattttggaaatc 18023921  T
Q  490 accaaca 496  Q
    |||||||    
T  18023920 accaaca 18023914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 29827429 - 29827509
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||     |||||||||||||||||||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  29827429 tattttacagatttat-----cagcaattcactcatgcattagagaattgatgaatgatttagagtaagagaatgagggagaatta 29827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 6852809 - 6852750
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacataa 499  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  6852809 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaacataa 6852750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 10584715 - 10584656
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacataa 499  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  10584715 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaacataa 10584656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 33702456 - 33702397
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacataa 499  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  33702456 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaacataa 33702397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 33703447 - 33703506
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaa 220  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  33703447 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaa 33703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 8465097 - 8465155
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacata 498  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  8465097 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaacata 8465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 20891182 - 20891244
Alignment:
Q  169 cccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttg 231  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  20891182 cccaaatgccaagcatttatagtgcattatatgacccttcacatgagagaaaacacccctttg 20891244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 4050155 - 4050211
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  4050155 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 4050211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 4055289 - 4055345
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  4055289 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 4055345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 5481345 - 5481289
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  5481345 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 5481289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 6857912 - 6857856
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  6857912 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 6857856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 10672795 - 10672739
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  10672795 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 10672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 10677908 - 10677852
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  10677908 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 10677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 1302101 - 1302042
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacataa 499  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  1302101 tgaagagttacaacttttggttctaaagtgattccattattttggaaattaccaacataa 1302042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 18024133 - 18024086
Alignment:
Q  232 acttgaatcaatgttatggttcattaaacacccttttgccaaagatta 279  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18024133 acttgaatcaatgttatggtttattaaacacccttttgccaaagatta 18024086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 442 - 496
Target Start/End: Original strand, 269526 - 269580
Alignment:
Q  442 aagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  269526 aagagctacaacttttgattctaaagtgattccattattttggaaatcaccaaca 269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 20891496 - 20891550
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaa 494  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  20891496 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaa 20891550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 8458659 - 8458715
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||    
T  8458659 tgaagagttacaacttttagttctaaagtgattccattattttggaaatcaccaaca 8458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 492
Target Start/End: Complemental strand, 10591152 - 10591100
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcacc 492  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  10591152 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcacc 10591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 31076257 - 31076201
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  31076257 tgaagagtcacaacttttggttctaaagtgattccattattttggaaatcaccaaca 31076201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 31081364 - 31081308
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  31081364 tgaagagtcacaacttttggttctaaagtgattccattattttggaaatcaccaaca 31081308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 20891354 - 20891413
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatataca 350  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||| ||| |||||||||    
T  20891354 acttgaatcaatgctatggttcattaagcacccttttgccaaaggttatggtcatataca 20891413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 440 - 499
Target Start/End: Original strand, 49784893 - 49784952
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacataa 499  Q
    ||||||||||||||||||| || |||||| |||| ||||||||| |||||||||||||||    
T  49784893 tgaagagttacaacttttggttttaaagtgattctattattttggaaatcaccaacataa 49784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 18024228 - 18024168
Alignment:
Q  170 ccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaataccccttt 230  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||| |||||| ||| ||||    
T  18024228 ccaaatgtcaagcatttatagtgcattatatgacccttcacatgagagaaaacacctcttt 18024168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 5457868 - 5457814
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacataa 499  Q
    ||||||||||||||||||||||||||     ||||||||||||| |||||||||||||||    
T  5457868 tgaagagttacaacttttgattctaa-----ttccattattttggaaatcaccaacataa 5457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 494
Target Start/End: Complemental strand, 18023427 - 18023324
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    ||||||| ||| ||||| || |||||  ||||| |||| ||| |  |||| |||| ||||||||||  |||||||||| |||||||||||||| ||||||    
T  18023427 aatgttctaatatatatgaatgattcctatgaaaagttgcaatttctggtaaagacttacaactttcaattctaaagtgattccattattttggaaatca 18023328  T
Q  491 ccaa 494  Q
    ||||    
T  18023327 ccaa 18023324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 20891281 - 20891340
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatataca 350  Q
    ||||||||||||| || |||||| |||||| || |||||||||||| |||||||||||||    
T  20891281 acttgaatcaatgatatggttcattaagcaaccatttgccaaaggttatgatcatataca 20891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 20891354 - 20891397
Alignment:
Q  232 acttgaatcaatgttatggttcattaaacacccttttgccaaag 275  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||    
T  20891354 acttgaatcaatgctatggttcattaagcacccttttgccaaag 20891397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 1302230 - 1302160
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  1302230 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 1302160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 4050026 - 4050096
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  4050026 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 4050096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 4055160 - 4055230
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  4055160 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 4055230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 10672924 - 10672854
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  10672924 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 10672854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 10678037 - 10677967
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  10678037 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 10677967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 31076388 - 31076318
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  31076388 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 31076318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 31081493 - 31081423
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  31081493 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 31081423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 498
Target Start/End: Complemental strand, 31018090 - 31018015
Alignment:
Q  422 aagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacata 498  Q
    |||||||||||||||| ||||||| || |||||||  |||||||| | |||| |||||||| ||||| |||||||||    
T  31018090 aagagttacaactcttagtgaagaattgcaactttatattctaaa-tgattctattattttaaaaattaccaacata 31018015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 5481474 - 5481404
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||  | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  5481474 acttgaatcaatgtcatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 5481404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 6852938 - 6852868
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | ||||  |||||||| |||||||||||| || | |||||| ||||||||||||    
T  6852938 acttgaatcaatgccatgattcatcaagcacccttttgccaaaggttataaccatatatacttgaatcaat 6852868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 6858041 - 6857971
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | ||||  |||||||| |||||||||||| || | |||||| ||||||||||||    
T  6858041 acttgaatcaatgccatgattcatcaagcacccttttgccaaaggttataaccatatatacttgaatcaat 6857971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 8458530 - 8458600
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||| ||||| |||||||||||| || | |||||| ||||||||||||    
T  8458530 acttgaatcaatgccatgattcattaaccacccttttgccaaaggttataaccatatatacttgaatcaat 8458600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 10584844 - 10584774
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| | ||||||||||    
T  10584844 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatatttgaatcaat 10584774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 10591281 - 10591211
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| ||| |||||||| || | |||||| ||||||||||||    
T  10591281 acttgaatcaatgccatgattcattaagcacccttttaccaaaggttataaccatatatacttgaatcaat 10591211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 20891354 - 20891396
Alignment:
Q  350 acttgaatcaattcaaaggttcattaagcacccttttgccaaa 392  Q
    |||||||||||| | | ||||||||||||||||||||||||||    
T  20891354 acttgaatcaatgctatggttcattaagcacccttttgccaaa 20891396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 20891474 - 20891516
Alignment:
Q  398 caatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    |||||||||| || ||||||||||||||||||||||| |||||    
T  20891474 caatgtatatgaatgattctcatgaagagttacaacttttggt 20891516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 33702585 - 33702515
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | | |||| ||||||||||||    
T  33702585 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccttatatacttgaatcaat 33702515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 4050126 - 4050175
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  4050126 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 4050175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 4055260 - 4055309
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  4055260 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 4055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 5481374 - 5481325
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  5481374 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 5481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 6852838 - 6852789
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  6852838 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 6852789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 6857941 - 6857892
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  6857941 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 6857892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 8465068 - 8465117
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  8465068 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 8465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 10584744 - 10584695
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  10584744 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 10584695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 10591181 - 10591132
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  10591181 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 10591132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 10672824 - 10672775
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  10672824 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 10672775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 10677937 - 10677888
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  10677937 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 10677888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 49784864 - 49784913
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || ||||  ||||||||||||||||| |||||    
T  49784864 aatgttccaatgtatatgaatgatttccatgaagagttacaacttttggt 49784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 20891281 - 20891333
Alignment:
Q  232 acttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatc 284  Q
    ||||||||||||| ||||||||||||| || || |||||||||| ||| ||||    
T  20891281 acttgaatcaatgatatggttcattaagcaaccatttgccaaaggttatgatc 20891333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 159 - 498
Target Start/End: Complemental strand, 35368960 - 35368621
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||| || | |||||||||||||||||||||| ||||||||    
T  35368960 caaattaatgcccaaatgtcaagcatttatagtgcattatatgacttttcacatgagagaaaacactcatttgacttgaatcaatgttatgattcattaa 35368861  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
    ||||| ||||  ||||  ||| |||| || ||||||||||||||||||||||||| |||||||| ||||| ||||||| || ||||||||||||| ||||    
T  35368860 acacctttttatcaaatgttatgatcatatacacttgaatcaatgctaaggttcattaagcacctctttgtcaaaggttataatcatatacacttaaatc 35368761  T
Q  359 aattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttg 458  Q
    ||| | |||||||||||||||| | ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  35368760 aatgctaaggttcattaagcactcatttgccaaaggttccaatgtatatgaaagattctcataaagagttacaactcttgatgaaaagttacaacttttg 35368661  T
Q  459 attctaaagtaattccattattttgaaaatcaccaacata 498  Q
    |||||||||| |||||||| ||||  |||| |||||||||    
T  35368660 attctaaagtgattccattcttttagaaattaccaacata 35368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 291 - 496
Target Start/End: Complemental strand, 43540768 - 43540564
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||| |||||| || |||||| ||||||||  |||| ||||||| |||||||||||||||||||||||| | ||| |||||||||||||| |||||||    
T  43540768 acttgagtcaatgttatggttcattaagcacct-tttgtcaaaggttatgatcatatacacttgaatcaatactaagattcattaagcacccctttgcca 43540670  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| ||  |||  ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||| ||||||    
T  43540669 aaggttccaatgtatatgaataattaccatgaagagttacaactcttggtgaagagttacaacttttggttctaaattgattcaattattttggaaatca 43540570  T
Q  491 ccaaca 496  Q
    ||||||    
T  43540569 ccaaca 43540564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 161 - 361
Target Start/End: Original strand, 2023101 - 2023300
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||||||||||| ||||||||||    
T  2023101 aactaatgcccatatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcaccc-tttgacttgaatcaatgttatgattcattaaac 2023199  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaa 360  Q
    |||| |||| ||||| ||| |||| || ||||||||||||||| || | |||| ||||||||| |||||||||||| || | |||| |||||||||||||    
T  2023200 acccatttgtcaaaggttatgatcatatacacttgaatcaatgttatgattcattaagcacccttttgccaaaggttataaccatacacacttgaatcaa 2023299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 13556361 - 13556186
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||| ||||||||||||||||| |||| |||||||| |    
T  13556361 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacccatttgacttgaatcaatgctatgattcattaagc 13556262  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    ||| ||||||||||| |||  ||| || |||||||||||||||| || ||||| ||||||||  ||||||||||||    
T  13556261 acctttttgccaaaggttataatcatatacacttgaatcaatgcaaatgttcattaagcacctatttgccaaaggt 13556186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 291 - 440
Target Start/End: Complemental strand, 13556290 - 13556141
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||||||||| | |||| ||||||||  |||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||  |||||||    
T  13556290 acttgaatcaatgctatgattcattaagcacctttttgccaaaggttataatcatatacacttgaatcaatgcaaatgttcattaagcacctatttgcca 13556191  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    || |||||||||||||| |||||||| |||||||||||||||||||||||    
T  13556190 aaggttccaatgtatatgaaagattcccatgaagagttacaactcttggt 13556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 43540839 - 43540665
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||| |||||||  ||||||||||||||||||||| |||||||||| |||| |  | | |||||||||| ||||||||||||||||||||    
T  43540839 caaattaatgcccagatgccaagtatttatagtgcattatatgacccttcacatgagagaaca--ctcatttgacttgagtcaatgttatggttcattaa 43540742  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
     |||| ||||| ||||| ||| |||| || |||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  43540741 gcacc-ttttgtcaaaggttatgatcatatacacttgaatcaatactaagattcattaagcacccctttgccaaaggt 43540665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 9872481 - 9872367
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||  ||| |||||||| |    
T  9872481 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagc 9872382  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  9872381 acccttttgccaaag 9872367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 9877596 - 9877482
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||  ||| |||||||| |    
T  9877596 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagc 9877497  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  9877496 acccttttgccaaag 9877482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 39909105 - 39909219
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||  ||| |||||||| |    
T  39909105 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagc 39909204  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  39909205 acccttttgccaaag 39909219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 2022964 - 2023049
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||| || |||||||    
T  2022964 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataagagaatggtgaagaatta 2023049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 13556509 - 13556424
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  13556509 tattttacatatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataagagaatgatgaagaatta 13556424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 361
Target Start/End: Original strand, 43379554 - 43379730
Alignment:
Q  180 aacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagatta 279  Q
    |||||||||||||||||||||||| ||||||||     |||| || | ||| |||||||||||||||||| |||| ||| ||| ||||| |||||| |||    
T  43379554 aacatttatagtgcattatatgacccttcacat-----aaaacactcattttacttgaatcaatgttatgattcactaagcactcttttaccaaagttta 43379648  T
Q  280 cgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
     |||| || |||||||||||||||||| |||||| ||| || | |||| ||||| || |||||||||||| ||| |||||||    
T  43379649 tgatcatatacacttgaatcaatgctacggttcattaaacatcactttaccaaaagttatgatcatatacgcttaaatcaat 43379730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 391 - 496
Target Start/End: Original strand, 2024362 - 2024467
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    ||||||||||||||||| || | ||| | ||||||||||||||||||||| |||| | |||||||||| ||||||||| |||||||||||||| ||||||    
T  2024362 aatgttccaatgtatatgaatggttcccgtgaagagttacaactcttggtcaagattaacaacttttggttctaaagtgattccattattttggaaatca 2024461  T
Q  491 ccaaca 496  Q
    ||||||    
T  2024462 ccaaca 2024467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 9877743 - 9877658
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  9877743 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 9877658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 35369095 - 35369010
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||    
T  35369095 tattttacagatttatggttacaacaattcactcatgcattagagaattgatggatgatttagagtaagagaatgaggaagaatta 35369010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 39903845 - 39903930
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  39903845 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 39903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 39908958 - 39909043
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  39908958 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 39909043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 9872628 - 9872555
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaat 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  9872628 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaat 9872555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 39903992 - 39904106
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||  ||| |||||||| |    
T  39903992 aactaatgccaaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagc 39904091  T
Q  261 acccttttgccaaag 275  Q
    ||  |||||||||||    
T  39904092 actattttgccaaag 39904106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 2023171 - 2023272
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || | |||| ||| ||||| |||| ||||||| ||||||||||||||||||||||||   | | ||||||||||||||||||||||    
T  2023171 acttgaatcaatgttatgattcattaaacacccatttgtcaaaggttatgatcatatacacttgaatcaatgttatgattcattaagcacccttttgcca 2023270  T
Q  391 aa 392  Q
    ||    
T  2023271 aa 2023272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 4555653 - 4555738
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||| |||||  ||||||||||| |||||| || |||||||    
T  4555653 tattttacagatttatggtaccaataattcactcatgcattagagaattaatggatgatttagagtaatagaatggtgaagaatta 4555738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 43378437 - 43378496
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatt 74  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  43378437 tattttacagatttatggttccagcaattcactaatgcattaaagaattgatggagaatt 43378496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 9872281 - 9872225
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  9872281 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 9872225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 9877396 - 9877340
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  9877396 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 9877340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 441 - 496
Target Start/End: Original strand, 39909306 - 39909361
Alignment:
Q  441 gaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  39909306 gaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 39909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 496
Target Start/End: Original strand, 4555920 - 4556018
Alignment:
Q  398 caatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||||| || ||||  | ||||||| || |||| ||| | || ||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  4555920 caatgtatatgaatgatttccgtgaagaggtataacttttgataaaaagttacaacttttaattctaaagtgattccattattttggaaatcaccaaca 4556018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 43402187 - 43402093
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||||||  |||| |||||||||||||||||||||||||  ||||| |||| |||||| | |  ||||| | |||||||||||||||||||||||    
T  43402187 taatgcctcaatgacaaacatttatagtgcattatatgatccttcatatgaaagaaaacatcaatttgattcgaatcaatgttatggttcattaa 43402093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 43379601 - 43379686
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaa 376  Q
    ||||||||||||| || | |||||||||||| | ||| |||||| | |||||||||||||||||||||||| | | ||||||||||    
T  43379601 acttgaatcaatgttatgattcactaagcactcttttaccaaagtttatgatcatatacacttgaatcaatgctacggttcattaa 43379686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 39904192 - 39904248
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  39904192 tgaagagttacaacttttggttctaaagtgattcaattattttggaaatcaccaaca 39904248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 2023230 - 2023301
Alignment:
Q  232 acttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatg 303  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||  | | || |||||||||||||||    
T  2023230 acttgaatcaatgttatgattcattaagcacccttttgccaaaggttataaccatacacacttgaatcaatg 2023301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 4555772 - 4555835
Alignment:
Q  166 atgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctt 229  Q
    ||||||||||| ||| ||||||||||||||||||||||| || |||||| |||||| |||||||    
T  4555772 atgcccaaatgtcaagcatttatagtgcattatatgactattaacatgagagaaaacacccctt 4555835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 13556161 - 13556105
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||| ||| || |||||| |||||||||||||| ||||||||||||    
T  13556161 tgaagagttacaactcttggttttaaagtgattccattattttggaaatcaccaaca 13556105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 24091869 - 24091825
Alignment:
Q  396 tccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    |||||||||||| |||||||||||| |||||||||||||||||||    
T  24091869 tccaatgtatatgaaagattctcataaagagttacaactcttggt 24091825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 25184114 - 25184166
Alignment:
Q  37 agcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatg 89  Q
    ||||||||||| || ||||||||||||||||||  ||||||||||||||||||    
T  25184114 agcaattcactaatacattagagaattgatggatgatttagagtaagagaatg 25184166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 43540928 - 43540881
Alignment:
Q  50 tgcattagagaattgatggaaaatttagagtaagagaatgatggagaa 97  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  43540928 tgcattagagaattgatagatgatttagagtaagagaatgatggagaa 43540881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 9872410 - 9872340
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  9872410 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 9872340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 9877525 - 9877455
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  9877525 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 9877455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 39909176 - 39909246
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  39909176 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 39909246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 550
Target Start/End: Complemental strand, 42688453 - 42688407
Alignment:
Q  504 tagtttatgttattttaagcattctaattcaataaagttttgttagt 550  Q
    |||||||||| ||||| ||||||| || |||||||||||||||||||    
T  42688453 tagtttatgtcatttttagcattcaaaatcaataaagttttgttagt 42688407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 9872310 - 9872261
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  9872310 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 9872261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 9877425 - 9877376
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  9877425 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 9877376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 24091843 - 24091794
Alignment:
Q  442 aagagttacaacttttgattctaaagtaattccattattttgaaaatcac 491  Q
    ||||||||||||| ||| ||||||||| |||| ||||||||| |||||||    
T  24091843 aagagttacaactcttggttctaaagtgattctattattttggaaatcac 24091794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 39904163 - 39904212
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  39904163 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 39904212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 6e-91; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 159 - 492
Target Start/End: Complemental strand, 10186640 - 10186307
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||  |||| ||||||||||| ||||| |||||||||||||    
T  10186640 caaattaatgcccaaatgtcaaacatttatagtgcattatatgacccttcacatgagagaaagcacccatttgacttgaaccaatgctatggttcattaa 10186541  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
     ||||| |||| ||||| ||| |||| || |||||||||||||||||| |||||| ||||||||| ||||||||| || |  | |||||| |||| ||||    
T  10186540 gcacccctttgtcaaaggttatgatcatatacacttgaatcaatgctatggttcattaagcacccttttgccaaaagttacaaccatataaacttcaatc 10186441  T
Q  359 aattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttg 458  Q
    |||   |||| ||||||||||||| ||||| ||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10186440 aatgataaggctcattaagcacccctttgctaaaagtttcaatgtatatgaaagattcccatgaagagttacaactcttggtgaagagttaaaacttttg 10186341  T
Q  459 attctaaagtaattccattattttgaaaatcacc 492  Q
    | |||||||| |||||||||||||| ||| ||||    
T  10186340 agtctaaagtgattccattattttggaaagcacc 10186307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 291 - 490
Target Start/End: Original strand, 19311031 - 19311230
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| ||  ||||| ||||||||| ||| |||||||| |||||||||||||||||||||||| | ||||||||||| |||||| |||||||    
T  19311031 acttgaatcaatgttatagttcattaagcacccttttaccaaaggttatgatcatatacacttgaatcaatgctaaggttcattatgcacccctttgcca 19311130  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||    
T  19311131 aaggttccaatgtatatgaaagattcccatgaagagttacaactcttggtgaagagttacaacttttggttataaagtgattccattattttggaaatca 19311230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 291 - 494
Target Start/End: Original strand, 13654527 - 13654730
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| |||| |||| |||||||| ||| ||||||||| |||||||| ||||| |||| ||||||||||||||  |||||||    
T  13654527 acttgaatcaatgttatggttcattaagtacccttttgccaagggttatgatcatacacacttgagtcaatgcaaaagttcattaagcacctatttgcca 13654626  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |    
T  13654627 aaggttccaatgtatatgaaagactctcatgaagagttacaactcttggtgaagagttacaacttttggttctaaagtgattccattattttggaaatta 13654726  T
Q  491 ccaa 494  Q
    ||||    
T  13654727 ccaa 13654730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 161 - 390
Target Start/End: Complemental strand, 21431739 - 21431509
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccc-tttgacttgaatcaatgttatggttcattaaa 259  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||  ||||| |||||||| ||||||||||||||||||||||     
T  21431739 aactaatgcccaaatgtcaagcatttatagtgcattatatgacccttcacatgagagaaagcaccccctttgacttaaatcaatgttatggttcattaag 21431640  T
Q  260 cacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatca 359  Q
    |||||||||||||||| ||| |||| || ||||||||||||||| |||||||||  |||||||| |||||||||||| || || ||||||||||||||||    
T  21431639 cacccttttgccaaaggttatgatcatacacacttgaatcaatgttaaggttcatcaagcacccatttgccaaaggttataattatatacacttgaatca 21431540  T
Q  360 attcaaaggttcattaagcacccttttgcca 390  Q
    || ||||  |||||||| ||||  |||||||    
T  21431539 atgcaaaaattcattaaacacctatttgcca 21431509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 291 - 483
Target Start/End: Original strand, 1188029 - 1188221
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||| |||| || |||||| ||| ||||| |||||||||||| ||||||||||||||||| |||||| | |||||||||||| || ||||||||||    
T  1188029 acttgaattaatgttatggttcattaaacacccatttgccaaaggttatgatcatatacacttgtatcaatgctaaggttcattaatcatccttttgcca 1188128  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttg 483  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  1188129 aatgttccaatgtatatgaaagattcccatgaatagttacaactcttggtgaaaagttacaacttttggttctaaagtgattccattattttg 1188221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 19310958 - 19311135
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||||  |||||||||||||||||||||||||| |||||||||    
T  19310958 caaattaatgcccaaatgtcaaacatttatagtgcattacatgacccttcacatgagagaaagcacccctttgacttgaatcaatgttatagttcattaa 19311057  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
     ||||||||| |||||| ||| |||| || ||||||||||||||||||||||||| || |||||||||||||||||||    
T  19311058 gcacccttttaccaaaggttatgatcatatacacttgaatcaatgctaaggttcattatgcacccctttgccaaaggt 19311135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 291 - 483
Target Start/End: Original strand, 10185907 - 10186099
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| ||||||||  |||||||||||| || | ||||||||||||||||||  | |||||||||||||||||| ||||| |    
T  10185907 acttgaatcaatgatatggttcattaagcacctttttgccaaaggttataaccatatacacttgaatcaacgctaaggttcattaagcacccatttgcta 10186006  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttg 483  Q
    || ||| |||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10186007 aaggtttcaatgtatatgaaagattcccataaagagttacaattcttggtgaagagttacaacttttgattctaaagtgattccattattttg 10186099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 293 - 494
Target Start/End: Complemental strand, 35653237 - 35653036
Alignment:
Q  293 ttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaa 392  Q
    ||||||||||| || |||||| ||||||| |||||| ||||||| ||||||||||||||||||||| || | || |||| |||||||||| ||| |||||    
T  35653237 ttgaatcaatgatatggttcattaagcactcctttgtcaaaggttatgatcatatacacttgaatcgatcctaaagttcgttaagcaccccttttccaaa 35653138  T
Q  393 tgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcacc 492  Q
     | |||||| ||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  35653137 ggctccaatatatatgaatgattcccatgaagtgttacaactcttggtgaagagttacaacttttggttccaaagtgattccattattttggaaatcacc 35653038  T
Q  493 aa 494  Q
    ||    
T  35653037 aa 35653036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 161 - 440
Target Start/End: Original strand, 43358890 - 43359169
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||  || | ||||||||||||||||| |||| |||||||| |    
T  43358890 aactaatgcccaaatgccaagcatttatagtgcattataggactcttcacatgagagaaagcactcatttgacttgaatcaatgctatgattcattaagc 43358989  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaa 360  Q
    |||| |||||||||| ||| |||| || ||||||||||||||| || |||||| | ||||||| ||||||||| || || | ||||||||||||||||||    
T  43358990 acccctttgccaaaggttatgatcatatacacttgaatcaatgttatggttca-ttagcacccttttgccaaatgttataaccatatacacttgaatcaa 43359088  T
Q  361 ttcaaaggttcattaagcacccttttgcca-aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    |   | |||||||||   | |  |     | ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  43359089 tatcatggttcattatcaatcaataaataataatgttccaatgtatatgaatgattctcatgaagagttacaactcttggt 43359169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 325 - 496
Target Start/End: Original strand, 1188218 - 1188389
Alignment:
Q  325 tttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaag 424  Q
    |||||||||||| ||||| ||||||||||| ||||||   ||| ||||||||||| |||||||||||||||||||||  |||  ||||||||  |||| |    
T  1188218 tttgccaaaggttatgataatatacacttgtatcaatgttaagattcattaagcatccttttgccaaatgttccaattcatacgaaagattcctatgacg 1188317  T
Q  425 agttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||| ||||||||||||    
T  1188318 agttacaactcttggtgaaaagttacaatttttggttctaaagtgattccattattttggaaatcaccaaca 1188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 336
Target Start/End: Original strand, 13654468 - 13654631
Alignment:
Q  173 aatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgcca 272  Q
    ||||||||  ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  13654468 aatgccaagtatttatagtgcattatatgacccttcacatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagtacccttttgcca 13654567  T
Q  273 aagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    | | ||| |||| || |||||||| ||||||| || ||||| ||||||||  ||||||||||||    
T  13654568 agggttatgatcatacacacttgagtcaatgcaaaagttcattaagcacctatttgccaaaggt 13654631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 159 - 333
Target Start/End: Original strand, 1187956 - 1188130
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||||||| ||| || ||||  || ||||||||||||| ||||||| || ||| ||||||||||||||||| ||||||||||||||||||    
T  1187956 caaattaatgcccaaatggcaagcacttattatggattatatgactctacacatgagagtaaacacccctttgacttgaattaatgttatggttcattaa 1188055  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaa 333  Q
    |||||| |||||||||| ||| |||| || ||||||| ||||||||||||||||| ||| || || |||||||||    
T  1188056 acacccatttgccaaaggttatgatcatatacacttgtatcaatgctaaggttcattaatcatccttttgccaaa 1188130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 496
Target Start/End: Original strand, 35626328 - 35626591
Alignment:
Q  222 tacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcac 321  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||  ||| |||  || || |||||||||||||||||||||| |||  |     
T  35626328 tacccctttgacttgcatcaatgttatggttcatttaacacccttttgccaaaagttatgattatacactcttgaatcaatgctaaggttcattaaata- 35626426  T
Q  322 ccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatg 421  Q
    || |||| ||||||| || ||||||||||||||||||||  || | |||||||||| |||  |||||||||  ||| ||||||||| ||||||| ||||     
T  35626427 ccttttgtcaaaggttataatcatatacacttgaatcaaagcagaagttcattaagtacctatttgccaaagattctaatgtatatgaaagattttcat- 35626525  T
Q  422 aagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
             ||||||||||  |||||||||| |||||| |||||||| |||||||||||||  ||||||||||||    
T  35626526 --------aaactcttggtttagagttacaatttttga-tctaaagtgattccattattttagaaatcaccaaca 35626591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 159 - 318
Target Start/End: Original strand, 16051330 - 16051489
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||  ||||| |||| ||||||||||||||||| |||||||||||||    
T  16051330 caaattaatgcccaaatgtcaaacatttatagtgcattatatgaccattcacatgagtgaaaacacccttttgacttgaatcaatgatatggttcattaa 16051429  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaag 318  Q
     ||| | |||||||||  ||| |||| || |||||||||||||||||| |||||| ||||    
T  16051430 gcactcatttgccaaatgttatgatcatatacacttgaatcaatgctatggttcattaag 16051489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 10186783 - 10186698
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10186783 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagagtaagagaatgatggagaatta 10186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 43358755 - 43358838
Alignment:
Q  17 ttttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  43358755 ttttacagatttatggttccagcaattcactcatgcattagagaattgatggataatttagagtaagagaatgagggagaatta 43358838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 44524226 - 44524141
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  44524226 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttaaagtaagagaatgatggagaatta 44524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 3468215 - 3468329
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||  |||| |||||||||||||| ||| |||||||| |    
T  3468215 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacatctttaacttgaatcaatgtcatgattcattaagc 3468314  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  3468315 acccttttgccaaag 3468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 28574444 - 28574558
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||  ||| |||||||||||||  ||| |||||||| |    
T  28574444 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagc 28574543  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  28574544 acccttttgccaaag 28574558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 28598456 - 28598570
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||  ||| |||||||||||||  ||| |||||||| |    
T  28598456 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagc 28598555  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  28598556 acccttttgccaaag 28598570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 17414740 - 17414655
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  17414740 tattttccagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagagtaagagaatgagggagaatta 17414655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 495
Target Start/End: Complemental strand, 17414408 - 17414304
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    ||||||| ||||||||| || |||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||    
T  17414408 aatgttctaatgtatatgaatgattctaatgaagagttacaacttttggtgaagagttacaagttttggttctaaagtgattccattattttggaaatca 17414309  T
Q  491 ccaac 495  Q
    |||||    
T  17414308 ccaac 17414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 44524092 - 44523974
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcac--atgatagaaaatacccctttgacttgaatcaatgttatggttcatt 256  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||  ||||  ||||| |||| |||||||||||||||||||||||||||||    
T  44524092 caaattaatgcccaaatgtcaaacatttatagtgcattatatgacccttcacatatgagggaaaacacccatttgacttgaatcaatgttatggttcatt 44523993  T
Q  257 aaacacccttttgccaaag 275  Q
    || ||||| |||| |||||    
T  44523992 aagcacccctttgacaaag 44523974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 35626172 - 35626257
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  35626172 tattttatagatttatggttccaacaattcactcatgcattagagaattgatggatgatttagagtaagagaatgagggagaatta 35626257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 19310826 - 19310909
Alignment:
Q  17 ttttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  19310826 ttttacagatttatggttccagcaattcattcatgcattagagaattgatggatgatttatagtaagagaatgagggagaatta 19310909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 3465473 - 3465558
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  3465473 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 3465558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 3468067 - 3468152
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  3468067 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 3468152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 440
Target Start/End: Original strand, 16051403 - 16051552
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| ||||||| | ||||||||| || |||||||||||||||||||||||| | | ||||||||||| | || ||| |||    
T  16051403 acttgaatcaatgatatggttcattaagcactcatttgccaaatgttatgatcatatacacttgaatcaatgctatggttcattaagtatccatttacca 16051502  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||  ||||||||| || ||||| ||| |||||||| |||| |||||    
T  16051503 aatgttataatgtatatgaatgattcccataaagagttataacttttggt 16051552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 28574297 - 28574382
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  28574297 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 28574382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 28598309 - 28598394
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  28598309 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 28598394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 1187826 - 1187903
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatga 90  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  1187826 aatattttacagatttatggttctaccaattcactcatgcattaaagaattgatggatgatttagagtaagagaatga 1187903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 16051206 - 16051281
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatga 90  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||    
T  16051206 tattttacagatttatggtttcagcaattcactcatgcattagagaattgatggatgatttaaagtaagaaaatga 16051281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 196 - 335
Target Start/End: Complemental strand, 35653275 - 35653136
Alignment:
Q  196 tatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttg 295  Q
    |||||||| |||||||||| |||||| || | ||||| ||||||||||| ||||||||||||| ||| | |||| ||||| ||| |||| || |||||||    
T  35653275 tatatgacccttcacatgagagaaaacactcatttgaattgaatcaatgatatggttcattaagcactcctttgtcaaaggttatgatcatatacacttg 35653176  T
Q  296 aatcaatgctaaggttcactaagcacccctttgccaaagg 335  Q
    |||| || |||| ||||  ||||||||||||| |||||||    
T  35653175 aatcgatcctaaagttcgttaagcaccccttttccaaagg 35653136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 291 - 392
Target Start/End: Complemental strand, 21431667 - 21431566
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||| |||||||| || |||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||   ||||||||| |||||||| |||||||    
T  21431667 acttaaatcaatgttatggttcattaagcacccttttgccaaaggttatgatcatacacacttgaatcaatgttaaggttcatcaagcacccatttgcca 21431568  T
Q  391 aa 392  Q
    ||    
T  21431567 aa 21431566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 479
Target Start/End: Complemental strand, 44524017 - 44523889
Alignment:
Q  350 acttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagtta 449  Q
    ||||||||||||   | |||||||||||||||| |||| |||| |||  ||||||||| || ||||| |||||||||||||||||||| | ||||| |||    
T  44524017 acttgaatcaatgttatggttcattaagcacccctttgacaaaggtttaaatgtatatgaatgattcccatgaagagttacaactcttagcgaagattta 44523918  T
Q  450 caacttttgattctaaagtaattccattat 479  Q
    ||||||||| ||| ||||| ||||||||||    
T  44523917 caacttttggttc-aaagtgattccattat 44523889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 10185907 - 10186011
Alignment:
Q  232 acttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgcca 331  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||| |||  | | || ||||||||||||| ||||||||||| ||||||||| ||||| |    
T  10185907 acttgaatcaatgatatggttcattaagcacctttttgccaaaggttataaccatatacacttgaatcaacgctaaggttcattaagcacccatttgcta 10186006  T
Q  332 aaggt 336  Q
    |||||    
T  10186007 aaggt 10186011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 13654335 - 13654422
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaattt--agagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||  ||||  |||| |||||||||| |||||||||    
T  13654335 tattttacagatttatggtttcagcaattcactcatgcattagagaattaatggatgatttagagagcaagagaatgagggagaatta 13654422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 21431865 - 21431791
Alignment:
Q  26 tttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||| ||||||||| |||||||||||||||||||||  ||||||| ||||||||||| |||||||||    
T  21431865 tttatggttccatcaattcactgatgcattagagaattgatggatgatttagattaagagaatgagggagaatta 21431791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 409 - 496
Target Start/End: Complemental strand, 21430863 - 21430777
Alignment:
Q  409 aaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||||||| |||| ||| |||| ||| |||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||    
T  21430863 aaagattctcataaagaattataacttttgatgaagagttacaacttttga-tctaaaatgattctattattttgaaaatcaccaaca 21430777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 3696208 - 3696110
Alignment:
Q  399 aatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacat 497  Q
    ||||||||| || ||||| |||||| |||| ||||| ||| | ||||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||    
T  3696208 aatgtatatgaatgattcccatgaaaagttgcaacttttgataaagagttacaacttttgattccaaagtgattccattattttagaaattaccaacat 3696110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 28574644 - 28574700
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  28574644 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 28574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Original strand, 3468415 - 3468472
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacat 497  Q
    |||||| |||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  3468415 tgaagaattacaacttttgattctaaaatgattccattattttggaaatcaccaacat 3468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Original strand, 43359149 - 43359206
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacat 497  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||    
T  43359149 tgaagagttacaactcttggttctaaagtgattccattattttggaaatcaccaacat 43359206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 28598656 - 28598712
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||    
T  28598656 tgaagagttacaacttttggttctaaattgattccattattttggaaatcaccaaca 28598712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 29681588 - 29681632
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattag 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  29681588 aatattttacagatttatggttccagcaattcactaatgcattag 29681632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 48366257 - 48366213
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattag 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  48366257 aatattttacagatttatggttccagcaattcactaatgcattag 48366213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 17414620 - 17414566
Alignment:
Q  166 atgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaa 220  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||    
T  17414620 atgcccaaatgccaagcatttatagtgcattatatgaccattcacatgagagaaa 17414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 3701548 - 3701485
Alignment:
Q  168 gcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttg 231  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||| |||||| |||| ||||    
T  3701548 gcccaaatgtcaagtatttatagtgcattatgtgactcttcacatgagagaaaacacccttttg 3701485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 28574515 - 28574585
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  28574515 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 28574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 28598527 - 28598597
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  28598527 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 28598597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 10185885 - 10185949
Alignment:
Q  328 gccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaa 392  Q
    ||||| ||| ||||||||||| ||||||||||||   | ||||||||||||||| ||||||||||    
T  10185885 gccaagggttatgatcatatatacttgaatcaatgatatggttcattaagcacctttttgccaaa 10185949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 3468286 - 3468356
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||  | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  3468286 acttgaatcaatgtcatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 3468356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 3701451 - 3701370
Alignment:
Q  232 acttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttca 313  Q
    |||||||||||| |||||||||||||| || |  ||| |||||| ||  ||||  | |||||||||||||||||| ||||||    
T  3701451 acttgaatcaatattatggttcattaagcatcaatttaccaaaggttgtgatcagatacacttgaatcaatgctatggttca 3701370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 28574615 - 28574664
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  28574615 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 28574664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 28598627 - 28598676
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  28598627 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 28598676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 44524017 - 44523972
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    ||||||||||||| || |||||| |||||||||||||| |||||||    
T  44524017 acttgaatcaatgttatggttcattaagcacccctttgacaaaggt 44523972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 375
Target Start/End: Complemental strand, 3701451 - 3701367
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcatta 375  Q
    ||||||||||||  || |||||| |||||| |  ||| ||||||||  |||||| |||||||||||||||| | | |||||||||    
T  3701451 acttgaatcaatattatggttcattaagcatcaatttaccaaaggttgtgatcagatacacttgaatcaatgctatggttcatta 3701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 9e-81; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 162 - 434
Target Start/End: Original strand, 716402 - 716674
Alignment:
Q  162 actaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||| | ||||||||||||||||||||||| ||| |||||||||    
T  716402 actaatgcccaaatgccaaacatttatagtgcattatatgacctttcatatgagagaaaacatccctttgacttgaatcaatgttacggtccattaaaca 716501  T
Q  262 cccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    || ||||||||||| ||| |||| || || ||||||||||||||||| |||| ||||||||||||| |||||||| || |||||||||||||||||||||    
T  716502 cctttttgccaaaggttatgatcatacactcttgaatcaatgctaagcttcattaagcacccctttaccaaaggttataatcatatacacttgaatcaat 716601  T
Q  362 tcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaact 434  Q
     |||||||| ||||| ||||  ||| || || |||||||||||||| |||||||| ||| |||||||||||||    
T  716602 gcaaaggtttattaaacacctatttacctaaggttccaatgtatatgaaagattcacataaagagttacaact 716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 291 - 496
Target Start/End: Original strand, 42780391 - 42780596
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| |||||  || |||||||||||| ||||||||||||||||||||||||   | |||||||||||||||  ||||| |    
T  42780391 acttgaatcaatgttatggttcattaagccaccatttgccaaaggttatgatcatatacacttgaatcaatgttatggttcattaagcacctatttgcta 42780490  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||||| ||||||||| |||||||||||||| ||||||    
T  42780491 aaagttccaatgtatatgaaagattctcatgaagagttacaacttttggtcaagagtaacaacttttggttctaaagtgattccattattttggaaatca 42780590  T
Q  491 ccaaca 496  Q
    ||||||    
T  42780591 ccaaca 42780596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 30283507 - 30283389
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||| |    
T  30283507 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgaaagaaaacacccctttaacttgaatcaatattatggttcattaagc 30283408  T
Q  261 acccttttgccaaagatta 279  Q
    |||||||||||||||||||    
T  30283407 acccttttgccaaagatta 30283389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 161 - 322
Target Start/End: Original strand, 42780320 - 42780481
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    ||||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |    
T  42780320 aactaatgcccaactgtcaatcatttatagtgcattatatgactcttcacatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagc 42780419  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacc 322  Q
      || |||||||||| ||| |||| || ||||||||||||||| || |||||| ||||||||    
T  42780420 caccatttgccaaaggttatgatcatatacacttgaatcaatgttatggttcattaagcacc 42780481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 159 - 371
Target Start/End: Complemental strand, 20892408 - 20892197
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||| || |||||| || | ||||| ||||||||||||| |||||||||||    
T  20892408 caaactaatgcccaaatgtcaagtatttatagtgcattatatgactcttcacacgagagaaaacactcatttgatttgaatcaatgtt-tggttcattaa 20892310  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
     |||| ||||| ||||  ||| |||| || ||||||||||||||| || |||||| ||| ||| |  |||||||| ||||||||||||||||||||||||    
T  20892309 gcacctttttggcaaatgttatgatcatatacacttgaatcaatgttatggttcattaatcactcacttgccaaatgtcatgatcatatacacttgaatc 20892210  T
Q  359 aattcaaaggttc 371  Q
    ||| |||| ||||    
T  20892209 aatacaaatgttc 20892197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 45120534 - 45120648
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||| ||| |||||||| |    
T  45120534 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgtcatgattcattaagc 45120633  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  45120634 acccttttgccaaag 45120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 17720583 - 17720469
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  17720583 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 17720484  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  17720483 acccttttgccaaag 17720469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 716267 - 716352
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  716267 tattttacagatttagggttccagcaattcactcatgcattagagaattgatggatgatttagagtaagagaatgaaggagaatta 716352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 14917439 - 14917325
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| | |  ||| |||||||||||||  ||| |||||||| |    
T  14917439 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacagctatttaacttgaatcaatgccatgattcattaagc 14917340  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  14917339 acccttttgccaaag 14917325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 14917586 - 14917501
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  14917586 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 14917501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 30283645 - 30283560
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||||||||||    
T  30283645 tattttacagatttatggttctagcaattcactcatgcattagagaattgattgatgatttagagtaagagaaggatggagaatta 30283560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 389 - 483
Target Start/End: Complemental strand, 20892205 - 20892111
Alignment:
Q  389 caaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttg 483  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||||||| || ||||||||||| || |||||| ||||||||||||||    
T  20892205 caaatgttccaatgtatatgaatggttctcatgaagagttacaactcttggtgaaaagatacaacttttggttttaaagtgattccattattttg 20892111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 17720730 - 17720645
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  17720730 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 17720645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 42780184 - 42780269
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||||    
T  42780184 tattttacaaatttatggttccaacaattcactcatgcattagagaattgatggatgatttagagtaagagaatggtgaagaatta 42780269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 45120386 - 45120471
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||| ||||||||| |||||||    
T  45120386 tattttacagatttatggttccagcaattcactcatgcattggagaattgatggatgatttagaataatagaatgatgaagaatta 45120471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 16284437 - 16284523
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatgga-aaatttagagtaagagaatgatggagaatta 100  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |  | |||||||||||||||||| |||||||||    
T  16284437 tattttactgatttatggtttcagcaattcactcatgcattagagagttgatgaatgattttagagtaagagaatgagggagaatta 16284523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 14917239 - 14917183
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  14917239 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 14917183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 17720056 - 17720000
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  17720056 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 17720000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 45120734 - 45120790
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  45120734 tgaagagttacaacttttaattctaaagtgattccattattttggaaatcaccaaca 45120790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 30283307 - 30283249
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacata 498  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||||    
T  30283307 tgaagagttacaacttttggttctaaaatgattccattattttggaaatcaccaacata 30283249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 16286003 - 16286084
Alignment:
Q  196 tatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagat 277  Q
    |||||||| |||||||||| |||||| |||| ||| |||| |||||| ||||| |||||||||||||| |||| ||||||||    
T  16286003 tatatgacccttcacatgagagaaaacacccatttaacttcaatcaacgttatagttcattaaacaccattttaccaaagat 16286084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 17720383 - 17720327
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  17720383 tgaagagttacaacttttggttctaaagtgattctattattttggaaatcaccaaca 17720327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 23481924 - 23482039
Alignment:
Q  496 ataagtcatagtttatgttattttaagcattctaattcaataaagttttgttagtattggttctatgttggagctatattactataaatgttatggtttt 595  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||||| | |||| ||| |  ||| |||||||||| |||||| |||   |||| ||||    
T  23481924 ataagtcatagttcatgttattttaagtattttaattcaataaagtttcg-tagttttgatcatattttggagctattttactacaaacactatgctttt 23482022  T
Q  596 catttgaggttcaatat 612  Q
    ||||| | |||||||||    
T  23482023 catttcaagttcaatat 23482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 39178946 - 39179002
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||    
T  39178946 tgaagagttacaacttttagttctaaagtgattccattattttggaaatcaccaaca 39179002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 14917368 - 14917298
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  14917368 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 14917298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 20892319 - 20892232
Alignment:
Q  308 ggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaatgt 395  Q
    |||||| ||||||||  |||| |||| || ||||||||||||||||||||||||   | |||||||||| ||| |  |||||||||||    
T  20892319 ggttcattaagcacctttttggcaaatgttatgatcatatacacttgaatcaatgttatggttcattaatcactcacttgccaaatgt 20892232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 17720512 - 17720442
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| |||| |||||||    
T  17720512 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttcaatcaat 17720442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 30283436 - 30283366
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    ||||||||||||  || |||||| ||||||||| |||||||||| | || | |||||| ||||||||||||    
T  30283436 acttgaatcaatattatggttcattaagcacccttttgccaaagattataaccatatatacttgaatcaat 30283366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 45120605 - 45120675
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||  | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  45120605 acttgaatcaatgtcatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 45120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 14917268 - 14917219
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  14917268 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 14917219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 16284573 - 16284614
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatat 200  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  16284573 caaacaaatgcccaaataccaagcatttatagtgcattatat 16284614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 17720412 - 17720363
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  17720412 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 17720363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 134; Significance: 2e-69; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 291 - 496
Target Start/End: Original strand, 173561 - 173766
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||| || ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  173561 acttgaatcaatgctaaggttcattaaacactcctttgtcaaatgttatgatcatatacacttgaatcaatgttaaggttcattaagcacccttttgcca 173660  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  173661 aaggttccaatgtatatgaatgattcccatgaatagttacaactcttggtgaagagttacaacttttggttctaaagtgattcaattattttgtaaatca 173760  T
Q  491 ccaaca 496  Q
    ||||||    
T  173761 ccaaca 173766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 164 - 336
Target Start/End: Original strand, 173493 - 173665
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacc 263  Q
    |||||| |||||  ||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||     
T  173493 taatgcacaaatatcaaacatttatagcgcattatatgacccttcacatgatagaaaacacccatttgacttgaatcaatgctaaggttcattaaacact 173592  T
Q  264 cttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    | |||| ||||  ||| |||| || ||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  173593 cctttgtcaaatgttatgatcatatacacttgaatcaatgttaaggttcattaagcacccttttgccaaaggt 173665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 173358 - 173431
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaat 88  Q
    ||||||| ||||||||||||||||||||||||  || ||||||||||||||||||  |||||||||||||||||    
T  173358 tattttagagatttatggttccagcaattcacctatacattagagaattgatggatgatttagagtaagagaat 173431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 2e-69; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 291 - 496
Target Start/End: Complemental strand, 14643731 - 14643526
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||| || ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  14643731 acttgaatcaatgctaaggttcattaaacactcctttgtcaaatgttatgatcatatacacttgaatcaatgttaaggttcattaagcacccttttgcca 14643632  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  14643631 aaggttccaatgtatatgaatgattcccatgaatagttacaactcttggtgaagagttacaacttttggttctaaagtgattcaattattttgtaaatca 14643532  T
Q  491 ccaaca 496  Q
    ||||||    
T  14643531 ccaaca 14643526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 291 - 496
Target Start/End: Original strand, 47071609 - 47071814
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||||||| | |||||| |||||| || |||||||||||| ||||||||||||||||||||||||   | |||||||||||||||| |||||||    
T  47071609 acttgaatcaatgcaatggttcattaagcatccatttgccaaaggttatgatcatatacacttgaatcaatgttatggttcattaagcacccatttgcca 47071708  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||    
T  47071709 aaggttccaatgtatatgaatgattttcatgaagagttacaactcttggtgaagagttacaacttttggttgtaaagtgattccattattttggaaatca 47071808  T
Q  491 ccaaca 496  Q
    ||||||    
T  47071809 ccaaca 47071814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 164 - 496
Target Start/End: Complemental strand, 3409662 - 3409329
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacc 263  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||||| |||| |||||||| ||||    
T  3409662 taatgcccaaatgtcaaatatttatagtgcattatatgacccttcacatgagagaaaacactcctttgacttgaatcaatgctatgattcattaagcacc 3409563  T
Q  264 cttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattc 363  Q
    | |||||||||| ||| |||| || ||||||||||||||| || |||||| |||| |||| |||||||||||| || |  ||| ||| ||||||||||      
T  3409562 cctttgccaaaggttatgatcatatacacttgaatcaatgttatggttcattaagtacccttttgccaaaggttataactatacacatttgaatcaatgt 3409463  T
Q  364 aaaggttcattaagcacccttttgcca-aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattc 462  Q
     | |||||||||   | |  |     | ||||||||||||||||| || | ||||||||||||||||||| ||||||| |||||| |||||||||  |||    
T  3409462 catggttcattatctatcaataaataataatgttccaatgtatatgaatggttctcatgaagagttacaaatcttggtcaagagtaacaacttttagttc 3409363  T
Q  463 taaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||| |||||||||||||| ||||||||||||    
T  3409362 taaagtgattccattattttggaaatcaccaaca 3409329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 159 - 425
Target Start/End: Complemental strand, 34279572 - 34279305
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| |||||| |||||| | | |||||||||||||||||||||| |||||||||| |||||| || | ||||||||||||||||||||||||| ||| |    
T  34279572 caaattaatgctcaaatgtcgagcatttatagtgcattatatgacccttcacatgagagaaaacactcatttgacttgaatcaatgttatggttaattga 34279473  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
    |||||||||| |||||| ||| |||| || |||||| |||||||| ||||||| | ||||||| | |||||||||||| || ||||||||||||||||||    
T  34279472 acacccttttaccaaaggttatgatcatatacacttaaatcaatgttaaggtttattaagcactcatttgccaaaggttataatcatatacacttgaatc 34279373  T
Q  359 aattcaaaggttcattaagcacccttttgccaaatg-ttccaatgtatataaaagattctcatgaaga 425  Q
    ||| | |||||||||||||||||| |||| |||| | ||| ||||||||| || ||||| ||||||||    
T  34279372 aatgctaaggttcattaagcacccatttgtcaaaagattctaatgtatatgaatgattcccatgaaga 34279305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 159 - 437
Target Start/End: Complemental strand, 25618359 - 25618089
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||||||||||||||||||||| ||||||||||||||||||||||       |||| |||||| ||| || |||||||||||||||||||| ||||||||    
T  25618359 caaactaatgcccaaatgccaagcatttatagtgcattatatgac-------atgagagaaaacacctctgtgacttgaatcaatgttatgattcattaa 25618267  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
     || ||  |||| |||| ||| |||| || ||||||||||||||| || |||||| ||||||||| ||||||||| || || | ||||||||||||||||    
T  25618266 gcatccagttgcgaaaggttatgatcatatacacttgaatcaatgttatggttcattaagcacccttttgccaaatgttataaccatatacacttgaatc 25618167  T
Q  359 aattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactctt 437  Q
    ||| |||| |||||||||| ||||||||| |||| ||| |||||||||| ||||| ||||||||| |||||||||||||    
T  25618166 aatgcaaaagttcattaagaacccttttgtcaaaggttacaatgtatatgaaaga-tctcatgaacagttacaactctt 25618089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 291 - 496
Target Start/End: Original strand, 22118925 - 22119130
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||| |||  || |||||| |||||||||||||||| |||||   |||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  22118925 acttgaatgaataatatggttcattaagcacccctttgccgaaggttgcgatcatatacacttgaatcaatgctaaggttcattaagcacccatttgcca 22119024  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || ||||||||||| || || |||| ||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22119025 aaggttccaatgtaaatgaatgattttcaggaagagttgcaactcttgatgaagagttacaacttttggttctaaagtgattccattattttgaaaatca 22119124  T
Q  491 ccaaca 496  Q
    ||||||    
T  22119125 ccaaca 22119130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 291 - 498
Target Start/End: Complemental strand, 30019833 - 30019636
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||| || || |||||| ||||||||  |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||       |    
T  30019833 acttgaatca-tgttatggttcattaagcacctttttgccaaaggttatgatcatacacacttgaatcaatgcaaaggttcattaagcaccc-------a 30019742  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||  ||||||    
T  30019741 aaggttccaatgtatatgaaagattcccatgaagagttacaactcttggtgaagagttacaac--ttgattctaaagtgattccattattttagaaatca 30019644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 159 - 323
Target Start/End: Complemental strand, 30019906 - 30019743
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||| ||||||||||||| |||||||||||||||||    
T  30019906 caaactaatgcccaaatgccaaacatttatagtgcattatatgacccttcacatgagagaaagcacccatttgacttgaatc-atgttatggttcattaa 30019808  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcaccc 323  Q
     |||| ||||||||||| ||| |||| || |||||||||||||||| |||||||| |||||||||    
T  30019807 gcacctttttgccaaaggttatgatcatacacacttgaatcaatgcaaaggttcattaagcaccc 30019743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 161 - 359
Target Start/End: Complemental strand, 32429350 - 32429152
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||  ||| |||||||| |    
T  32429350 aactaatgcacaaatgccaagcatttatagtgcattatatgactcttcaaatgagagaaaacacccctttgacttgaatcaatgccatgattcattaagc 32429251  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatca 359  Q
    |||| |||| ||||| ||| |||| || ||||||||||||||| || | |||| ||||||||| ||||||||| || || | |||||||||||||||||    
T  32429250 acccctttgtcaaaggttatgatcatatacacttgaatcaatgttatgattcattaagcacccttttgccaaatgttataaccatatacacttgaatca 32429152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 54859237 - 54859059
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccc-tttgacttgaatcaatgttatggttcatta 257  Q
    |||| ||||||||||||  ||| |||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||||||||||||||    
T  54859237 caaattaatgcccaaatatcaagcatttatagtgcattatatgacccttcacatgagagaaaacaccccctttgacttgaatcaatgttatggttcatta 54859138  T
Q  258 aacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    | || || |||||||||| ||| |||| || ||||||||||||||| || | |||| ||||||||| ||||||||||||    
T  54859137 agcatccatttgccaaaggttatgatcatatacacttgaatcaatgttatgtttcattaagcacccttttgccaaaggt 54859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 164 - 336
Target Start/End: Complemental strand, 14643799 - 14643627
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacc 263  Q
    |||||| |||||  ||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||     
T  14643799 taatgcacaaatatcaaacatttatagcgcattatatgacccttcacatgatagaaaacacccatttgacttgaatcaatgctaaggttcattaaacact 14643700  T
Q  264 cttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    | |||| ||||  ||| |||| || ||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  14643699 cctttgtcaaatgttatgatcatatacacttgaatcaatgttaaggttcattaagcacccttttgccaaaggt 14643627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 22118850 - 22119029
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatac--ccctttgacttgaatcaatgttatggttcatt 256  Q
    |||| ||||||||||||| ||| ||||||||||  |||||||||| |||||||||| |||||||||  ||||||||||||||| |||  |||||||||||    
T  22118850 caaattaatgcccaaatgtcaagcatttatagtatattatatgacccttcacatgagagaaaatacacccctttgacttgaatgaataatatggttcatt 22118949  T
Q  257 aaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    || ||||| |||||| ||| || ||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  22118950 aagcacccctttgccgaaggttgcgatcatatacacttgaatcaatgctaaggttcattaagcacccatttgccaaaggt 22119029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 18670975 - 18671177
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| |||| |||||||||||| |||||||||| ||||||||||| |||||||||| |||||  |||| ||||||||||||||||| |||||||||||||    
T  18670975 caaattaattcccaaatgccaagcatttatagtccattatatgacccttcacatgagagaaagcacccatttgacttgaatcaatgctatggttcattaa 18671074  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatc 358  Q
     | | ||||| |||||| |||   || || ||||||||||||||| || |||||| ||||||||  |||||||||||| || | ||||||||||| ||||    
T  18671075 gccctcttttaccaaaggttatcttcatatacacttgaatcaatgttatggttcattaagcaccattttgccaaaggttataaccatatacacttaaatc 18671174  T
Q  359 aat 361  Q
    |||    
T  18671175 aat 18671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 291 - 432
Target Start/End: Complemental strand, 54859163 - 54859022
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| |||||| || |||||||||||| ||||||||||||||||||||||||   | | ||||||||||||||||||||||    
T  54859163 acttgaatcaatgttatggttcattaagcatccatttgccaaaggttatgatcatatacacttgaatcaatgttatgtttcattaagcacccttttgcca 54859064  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaa 432  Q
    || |||||||||||||| || |||||  ||||||||||||||    
T  54859063 aaggttccaatgtatatgaatgattccaatgaagagttacaa 54859022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 223 - 492
Target Start/End: Original strand, 18716689 - 18716958
Alignment:
Q  223 acccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacc 322  Q
    |||| ||||||||||||||||| ||||||||||||| | | ||||| |||||  ||| |||| || ||||||||||||||| || |||||| |||||||     
T  18716689 acccatttgacttgaatcaatgatatggttcattaagctctcttttaccaaaagttatgatcatatacacttgaatcaatgttatggttcattaagcact 18716788  T
Q  323 cctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagca-cccttttgccaaatgttccaatgtatataaaagattctcatg 421  Q
      || ||||||||| || | |||||||||||||||||||   | |||||||||   | | ||       ||||| ||||||||||| || | ||| ||||    
T  18716789 atttggccaaaggttataaccatatacacttgaatcaatgtcatggttcattatctatcactaaataataatgtaccaatgtatatgaatggttcccatg 18716888  T
Q  422 aagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcacc 492  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||| | |||||||||||||| ||||||||    
T  18716889 aagagttacaactcttggtgaagagttac-agttttggttctaaactgattccattattttggaaatcacc 18716958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 35091062 - 35091176
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  35091062 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 35091161  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  35091162 acccttttgccaaag 35091176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 35096175 - 35096289
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  35096175 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 35096274  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  35096275 acccttttgccaaag 35096289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 18737162 - 18737247
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||||||    
T  18737162 tattttacagatttatggttccagcaattcactcatgaattagagaattgatggatgatttagagtaagagaatgagggagaatta 18737247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 291 - 498
Target Start/End: Complemental strand, 34602024 - 34601823
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||||||  ||||| ||| || || |||| ||||||| ||||||||||| |      |||||   | |||||||||||||||| |||||||    
T  34602024 acttgaatcaatgctatagttcattaaacatccatttgtcaaaggttatgatcatatata------tcaatgttatggttcattaagcacccctttgcca 34601931  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    ||  ||| ||||||||| || |||||||||||||||||||||||  | ||||| |||||||||||||  ||||||| | |||||||||||||  ||||||    
T  34601930 aagattcaaatgtatatgaatgattctcatgaagagttacaacttctcgtgaaaagttacaacttttagttctaaaatgattccattattttagaaatca 34601831  T
Q  491 ccaacata 498  Q
    ||||||||    
T  34601830 ccaacata 34601823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 47071530 - 47071713
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgat------agaaaatacccctttgacttgaatcaatgttatggtt 252  Q
    |||| |||||||||||||  ||||||||||||| ||||||||||| ||||||||||       |||||| ||   |||||||||||||||||  ||||||    
T  47071530 caaattaatgcccaaatgttaaacatttatagtacattatatgacccttcacatgaacatgagagaaaacacttttttgacttgaatcaatgcaatggtt 47071629  T
Q  253 cattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    |||||| || || |||||||||| ||| |||| || ||||||||||||||| || |||||| ||||||||| ||||||||||||    
T  47071630 cattaagcatccatttgccaaaggttatgatcatatacacttgaatcaatgttatggttcattaagcacccatttgccaaaggt 47071713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 18670838 - 18670925
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  18670838 aatattttacagatttatggttccaacaagtcactcatgcattagagaattgatggatgatttagagtaagagaatgagggagaatta 18670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 32429487 - 32429402
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||    
T  32429487 tattttacagatttatggttccaacaattcactcatgcattaaagaattgatggatgatttagagtaagagaatgagggagaatta 32429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 34128442 - 34128356
Alignment:
Q  14 atattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  34128442 atattttacagatttatggtttcaacaattcactcatgcattagaaaattgatggatgatttagagtaagagaatgagggagaatta 34128356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 18716489 - 18716574
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||  |||||||||    
T  18716489 tattttacagatttatggttccagcaattcactcttgtattagagaattgatggatgatttagagtaagagaatgggggagaatta 18716574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 32429279 - 32429174
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||||||| | | |||| |||||||||||||| ||||||| ||||||||||||||||||||||||   | | ||||||||||||||||||||||    
T  32429279 acttgaatcaatgccatgattcattaagcacccctttgtcaaaggttatgatcatatacacttgaatcaatgttatgattcattaagcacccttttgcca 32429180  T
Q  391 aatgtt 396  Q
    ||||||    
T  32429179 aatgtt 32429174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 35096028 - 35096113
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  35096028 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 35096113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 492
Target Start/End: Original strand, 18737362 - 18737634
Alignment:
Q  223 acccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacc 322  Q
    |||| ||||||||||||||||| ||||||||||||| | | ||||| |||||  ||| |||| || ||||||||||||||| || |||||| |||||||     
T  18737362 acccatttgacttgaatcaatgatatggttcattaagctctcttttaccaaaagttatgatcatatacacttgaatcaatgttatggttcattaagcaca 18737461  T
Q  323 cctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagca-cccttttgccaaatgttccaatgtatataaaagattctcatg 421  Q
      || ||||||||| || |  ||||||||||||||||||   | |||||||||   | | ||       ||||| ||||||||||| || | ||| ||||    
T  18737462 atttagccaaaggttataacaatatacacttgaatcaatgtcatggttcattatctatcactaaataataatgtaccaatgtatatgaatggttcccatg 18737561  T
Q  422 aagagttacaactcttggtga---agagttacaacttttgattctaaagtaattccattattttgaaaatcacc 492  Q
    |||||||||||||||||||||   |||||||||| ||||| ||||||| | |||||||||||||| ||||||||    
T  18737562 aagagttacaactcttggtgaattagagttacaa-ttttggttctaaactgattccattattttggaaatcacc 18737634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 54859361 - 54859278
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaat 98  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||||||| |||||||    
T  54859361 tattttacggatttatggttccagcaattcactcgtgcattagagaattgatggatgatttagagcaagagaatgagggagaat 54859278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 30020054 - 30019969
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||||    
T  30020054 tatttcacatatttatggttccaacaattcactcatgcattagagaattgatggatgatttagagtaagagaatggtgaagaatta 30019969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 35090915 - 35090988
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaat 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  35090915 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaat 35090988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 47071408 - 47071493
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  47071408 tattttacaaatttatggttcaaacaattcactcattcattagagaattgatagataatttagagtaagagaatgagggagaatta 47071493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 34128319 - 34128220
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||| ||||||| ||| |||||||||||||||||||||| |||||||| | |||||| || | ||||||||||||||||||||| |||||||||    
T  34128319 caaattaatggccaaatgtcaagcatttatagtgcattatatgacccttcacattagagaaaacactcatttgacttgaatcaatgttatagttcattaa 34128220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 3424904 - 3424823
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggaga 96  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||| |||||  ||||||||||||||||||| |||||    
T  3424904 tattttacagatttatgtttccagtaactcactcatgcattagagaattaatggatgatttagagtaagagaatgagggaga 3424823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 34279695 - 34279610
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||   |||||||||||||||| || | |||||||    
T  34279695 tattttacagatttatggtttcaggaattcactcatgcattagagaattgatggttgatttagagtaagagaacgaggaagaatta 34279610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 14643934 - 14643861
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaat 88  Q
    ||||||| ||||||||||||||||||||||||  || ||||||||||||||||||  |||||||||||||||||    
T  14643934 tattttagagatttatggttccagcaattcacctatacattagagaattgatggatgatttagagtaagagaat 14643861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 18671048 - 18671149
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||||||||| |||||| ||||| | | ||| |||||||| ||  ||||||||||||||||||||   | ||||||||||||||| ||||||||    
T  18671048 acttgaatcaatgctatggttcattaagccctcttttaccaaaggttatcttcatatacacttgaatcaatgttatggttcattaagcaccattttgcca 18671147  T
Q  391 aa 392  Q
    ||    
T  18671148 aa 18671149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 35091262 - 35091318
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  35091262 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 35091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 3424764 - 3424698
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaataccccttt 230  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  3424764 taatgcccaaatatcaaatatttatagtgcattatatgacccttcacatgagagaaaacaccccttt 3424698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 35096375 - 35096433
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacata 498  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||    
T  35096375 tgaagagttacaactttttgttctaaagtgattccattattttggaaatcaccaacata 35096433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 3424170 - 3424114
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  3424170 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcacaaaca 3424114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 32429090 - 32429034
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||    
T  32429090 tgaagagttacaactcttggttctaaagtgattccattattttggaaatcaccaaca 32429034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 3424330 - 3424257
Alignment:
Q  319 cacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaa 392  Q
    |||||||||| ||||||| ||||||||||  |||| |||||||   | ||||||||||||||||||||||||||    
T  3424330 cacccctttgtcaaaggttatgatcatatcgacttaaatcaatgttatggttcattaagcacccttttgccaaa 3424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 3424300 - 3424228
Alignment:
Q  231 gacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacacttgaatcaatg 303  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||  | | || ||| |||||||||||    
T  3424300 gacttaaatcaatgttatggttcattaagcacccttttgccaaaggttataaccatacacatttgaatcaatg 3424228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 334
Target Start/End: Complemental strand, 34602061 - 34601928
Alignment:
Q  195 ttatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaagattacgatcttaaacactt 294  Q
    |||||||||  ||||||||| | |||| || | ||||||||||||||||| ||| |||||||||||| || |||| ||||| ||| |||| ||      |    
T  34602061 ttatatgaccattcacatgagaaaaaacactcatttgacttgaatcaatgctatagttcattaaacatccatttgtcaaaggttatgatcata------t 34601968  T
Q  295 gaatcaatgctaaggttcactaagcacccctttgccaaag 334  Q
      ||||||| || |||||| ||||||||||||||||||||    
T  34601967 atatcaatgttatggttcattaagcacccctttgccaaag 34601928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 35091133 - 35091203
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  35091133 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 35091203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 35096246 - 35096316
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  35096246 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 35096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 32429119 - 32429070
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || ||||  |||||||||||||||||||||||    
T  32429119 aatgttccaatgtatatgaatgatttccatgaagagttacaactcttggt 32429070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 451 - 496
Target Start/End: Complemental strand, 34279299 - 34279254
Alignment:
Q  451 aacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||    
T  34279299 aacttttggttctaaagtgattccattattttggaaatcaccaaca 34279254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 34601965 - 34601925
Alignment:
Q  238 atcaatgttatggttcattaaacacccttttgccaaagatt 278  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  34601965 atcaatgttatggttcattaagcacccctttgccaaagatt 34601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 34602121 - 34602065
Alignment:
Q  43 tcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatt 99  Q
    |||||||||||| ||| ||||||||||  ||||||||||| ||||||| ||||||||    
T  34602121 tcactcatgcataagaaaattgatggatgatttagagtaaaagaatgagggagaatt 34602065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 440
Target Start/End: Complemental strand, 34128218 - 34128159
Alignment:
Q  381 ccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    |||||||||||| |||||||| ||||| |||||||||||   |||||||||||| |||||    
T  34128218 ccttttgccaaaggttccaatatatatgaaagattctcacagagagttacaacttttggt 34128159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 3424299 - 3424229
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||| |||||||| || |||||| ||||||||| |||||||||||| || | |||| ||| ||||||||||    
T  3424299 acttaaatcaatgttatggttcattaagcacccttttgccaaaggttataaccatacacatttgaatcaat 3424229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 35091233 - 35091282
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  35091233 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 35091282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 124; Significance: 2e-63; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 291 - 494
Target Start/End: Original strand, 144288 - 144491
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| |||| |||| |||||||| ||| ||||||||| |||||||| ||||| |||| ||||||||||||||  |||||||    
T  144288 acttgaatcaatgttatggttcattaagtacccttttgccaagggttatgatcatacacacttgagtcaatgcaaaagttcattaagcacctatttgcca 144387  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |    
T  144388 aaggttccaatgtatatgaaagactctcatgaagagttacaactcttggtgaagagttacaacttttggttctaaagtgattccattattttggaaatta 144487  T
Q  491 ccaa 494  Q
    ||||    
T  144488 ccaa 144491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 336
Target Start/End: Original strand, 144229 - 144392
Alignment:
Q  173 aatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgcca 272  Q
    ||||||||  ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  144229 aatgccaagtatttatagtgcattatatgacccttcacatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagtacccttttgcca 144328  T
Q  273 aagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggt 336  Q
    | | ||| |||| || |||||||| ||||||| || ||||| ||||||||  ||||||||||||    
T  144329 agggttatgatcatacacacttgagtcaatgcaaaagttcattaagcacctatttgccaaaggt 144392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 144096 - 144183
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaattt--agagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||  ||||  |||| |||||||||| |||||||||    
T  144096 tattttacagatttatggtttcagcaattcactcatgcattagagaattaatggatgatttagagagcaagagaatgagggagaatta 144183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 173 - 380
Target Start/End: Complemental strand, 25953220 - 25953012
Alignment:
Q  173 aatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgcc- 271  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||| |||| |||||||| ||||||| |||||||||||||| || |||||||||     
T  25953220 aatgccaaacatttatagtgcattatatgaccattcacatgagagaaaacacccatttgacttaaatcaattttatggttcattaagcatccttttgcca 25953121  T
Q  272 aaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttc 371  Q
    |||  ||| |||| || ||||||||||||||  |||||||||  |||||| |  ||||||||| ||||||| |||||||||||||||||| ||| |||||    
T  25953120 aaatgttatgatcatatacacttgaatcaatattaaggttcatcaagcactcaattgccaaagctcatgataatatacacttgaatcaatgcaagggttc 25953021  T
Q  372 attaagcac 380  Q
    |||||||||    
T  25953020 attaagcac 25953012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 159 - 334
Target Start/End: Complemental strand, 18608708 - 18608534
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  18608708 caaattaatgcctaaatgccaaacatttgtagtgcattatatgac-cttcacatgagagaaaacacccctttaacttgaatcaatgttatggttcattaa 18608610  T
Q  259 acacccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaag 334  Q
     ||||| |||||||||| ||| || | || |||||||||||| ||||| ||||||  |||||||||||||||||||    
T  18608609 gcacccctttgccaaaggttatgaacatatacacttgaatcactgctatggttcatcaagcacccctttgccaaag 18608534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 291 - 493
Target Start/End: Complemental strand, 18608636 - 18608435
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    ||||||||||||| || |||||| |||||||||||||||||||||| |||| ||||||||||||||||| | | | ||||||| |||||||| |||||||    
T  18608636 acttgaatcaatgttatggttcattaagcacccctttgccaaaggttatgaacatatacacttgaatcactgctatggttcatcaagcacccctttgcca 18608537  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatca 490  Q
    ||  | ||||| ||||| || ||||| ||||||||||||||||||||||| |||| | |||||||||  ||||||||| |||||||||||||| ||||||    
T  18608536 aagatcccaat-tatatgaatgattcccatgaagagttacaactcttggttaagaatcacaacttttagttctaaagtgattccattattttggaaatca 18608438  T
Q  491 cca 493  Q
    |||    
T  18608437 cca 18608435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 161 - 497
Target Start/End: Complemental strand, 10341024 - 10340697
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||  ||| |||||||||||||||||| |||| |||||||| |    
T  10341024 aactaatgcccaaatgccaagcatttatggtgcattatatgactcttcacatgagaaaaagcacctctttgacttgaatcaatgctatgattcattaagc 10340925  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaa 360  Q
    ||||||||| ||||| ||| |||| || ||||||||||||||| || | |||| |||          ||||||||| || | |||| |||||||||||||    
T  10340924 acccttttgtcaaaggttatgatcatatacacttgaatcaatgttatgattcattaa----------gccaaaggttataaccatacacacttgaatcaa 10340835  T
Q  361 ttcaaaggttcattaagcacccttttgcca-aatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttga 459  Q
    |   | |||||||||   | |  |     | ||||||||||||||||| || | ||  ||||||||||||||||||||||| |||| | ||||||||||     
T  10340834 tgtcatggttcattatctatcaataaataataatgttccaatgtatatgaatggtttccatgaagagttacaactcttggtcaagattaacaacttttgg 10340735  T
Q  460 ttctaaagtaattccattattttgaaaatcaccaacat 497  Q
    ||||||||| |||||||||||| | |||||||||||||    
T  10340734 ttctaaagtgattccattatttgggaaatcaccaacat 10340697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 15207147 - 15207263
Alignment:
Q  496 ataagtcatagtttatgttattttaagcattctaattcaataaagttttgttagtattggttctatgttggagctatattactataaatgttatggtttt 595  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||| |||| |||||| |||||||||||||||    
T  15207147 ataagtcatagtttatgttattttaagcagtctaattcaataaagtttcgttagttttggttctatgatggaactattttactacaaatgttatggtttt 15207246  T
Q  596 catttgaggttcaatat 612  Q
    ||||| |||||||||||    
T  15207247 catttcaggttcaatat 15207263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 161 - 334
Target Start/End: Complemental strand, 43956907 - 43956734
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  || | ||||||||||||||||| |||| |||||||| |    
T  43956907 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcactcatttgacttgaatcaatgctatgattcattaagc 43956808  T
Q  261 acccttttgccaaagattacgatcttaaacacttgaatcaatgctaaggttcactaagcacccctttgccaaag 334  Q
    ||| ||||||||||| |||  ||| || ||| |||||||||||  || ||||| ||||||||  ||||||||||    
T  43956807 acctttttgccaaaggttataatcatatacatttgaatcaatgtaaatgttcattaagcacctatttgccaaag 43956734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 15201390 - 15201506
Alignment:
Q  496 ataagtcatagtttatgttattttaagcattctaattcaataaagttttgttagtattggttctatgttggagctatattactataaatgttatggtttt 595  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||| |||||| |||||||||||||||| |||| |||||| ||||| |||||||||    
T  15201390 ataagtcatagtttatatcattttaagcattctaattcgataaagtttcgttagttttggttctatgttggaactattttactacaaatgctatggtttt 15201489  T
Q  596 catttgaggttcaatat 612  Q
    ||||| |||||||||||    
T  15201490 catttcaggttcaatat 15201506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 291 - 438
Target Start/End: Complemental strand, 43956836 - 43956689
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaattcaaaggttcattaagcacccttttgcca 390  Q
    |||||||||||||||| | |||| ||||||||  |||||||||||| || |||||||||| ||||||||||  ||| ||||||||||||||  |||||||    
T  43956836 acttgaatcaatgctatgattcattaagcacctttttgccaaaggttataatcatatacatttgaatcaatgtaaatgttcattaagcacctatttgcca 43956737  T
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttg 438  Q
    ||  ||||||||||||| |||||||  |||||||||||||||||||||    
T  43956736 aagattccaatgtatatgaaagatttccatgaagagttacaactcttg 43956689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 26981932 - 26981818
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  26981932 aactaatgcccaaatgtcaaacatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 26981833  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  26981832 acccttttgccaaag 26981818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 34108378 - 34108492
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||| ||| |||||||| |    
T  34108378 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgtcatgattcattaagc 34108477  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  34108478 acccttttgccaaag 34108492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 14314968 - 14314854
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||  ||| |||||||||||||  ||| |||||||| |    
T  14314968 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagc 14314869  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  14314868 acccttttgccaaag 14314854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 14318672 - 14318558
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||  ||| |||||||||||||  ||| |||||||| |    
T  14318672 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagc 14318573  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  14318572 acccttttgccaaag 14318558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 26987046 - 26986932
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  26987046 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 26986947  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  26986946 acccttttgccaaag 26986932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 10341163 - 10341076
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||||    
T  10341163 aatattttacagatttatgattccagcaattcactcatgcattagagaatttatggatgatttagagtaagagaatgagggagaatta 10341076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 18494233 - 18494120
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  | || ||| |||||||||||||| ||| |||||||| |    
T  18494233 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagca-ccttttaacttgaatcaatgtcatgattcattaagc 18494135  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  18494134 acccttttgccaaag 18494120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 34108229 - 34108314
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  34108229 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 34108314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 14315115 - 14315030
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  14315115 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 14315030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 14318819 - 14318734
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  14318819 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 14318734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 18494380 - 18494295
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  18494380 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 18494295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 26982080 - 26981995
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  26982080 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 26981995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 26987193 - 26987108
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  26987193 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 26987108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 18885065 - 18885136
Alignment:
Q  16 attttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaa 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  18885065 attttacagatttatggttccagcaattcactcatgcattagagaattgattgatgatttagagtaagagaa 18885136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 43957051 - 43956968
Alignment:
Q  17 ttttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  43957051 ttttacaaatttatggtttcagcaattcactcatgcattagagaattgatggatgatttagaataagagaatgatgaagaatta 43956968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 18608832 - 18608747
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||| |||||  ||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  18608832 tattttacagatttatcgttccgtcaattaactcatgcattagagaattgatggatgatttagagtaagagaatgagggagaatta 18608747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 25953363 - 25953278
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||    
T  25953363 tattgtacatatttatggttcaagcaattcactcatgcattagacaattgatggatgatttagagtatgagaatgatggagaatta 25953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 1781963 - 1782062
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||| ||||||| ||||||||||||||||| |||| |||  ||||||||| |||||||||   |||||||||||||||||||||||||||||||    
T  1781963 caaattaatgtccaaatgtcaaacatttatagtgcagtatacgacctttcacatgagagaaaatactattttgacttgaatcaatgttatggttcattaa 1782062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 341 - 496
Target Start/End: Original strand, 1782083 - 1782237
Alignment:
Q  341 atcatatacacttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    |||||||||||||||||||||   | |||||||||| |||   ||||||||| ||||||||  |||| || ||||| | | |||||||||||||||| ||    
T  1782083 atcatatacacttgaatcaatgttatggttcattaatcactgatttgccaaaggttccaatacatatgaatgattcacgtaaagagttacaactctt-gt 1782181  T
Q  441 gaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||| |||||||  ||||||| |||||||||||||||  ||||| ||||||    
T  1782182 gaagagttataactttttgttctaaaataattccattattttagaaatctccaaca 1782237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 496
Target Start/End: Complemental strand, 14314766 - 14314712
Alignment:
Q  442 aagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14314766 aagagttacaacttttggttctaaagtaattccattattttgaaaatcaccaaca 14314712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 440 - 497
Target Start/End: Complemental strand, 43956707 - 43956650
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaacat 497  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  43956707 tgaagagttacaactcttgattctaaagtgattccattattttaaaaatcaccaacat 43956650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 14318472 - 14318416
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  14318472 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 14318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 26981732 - 26981676
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  26981732 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26981676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 26986846 - 26986790
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  26986846 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26986790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 34108578 - 34108634
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  34108578 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 34108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 18494034 - 18493978
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||    
T  18494034 tgaagagttacaacttttggttctaaattgattccattattttggaaatcaccaaca 18493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 14314897 - 14314827
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  14314897 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 14314827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 14318601 - 14318531
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  14318601 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 14318531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 26986975 - 26986905
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  26986975 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 26986905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 25952368 - 25952305
Alignment:
Q  394 gttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaactttt 457  Q
    |||||||| ||||| ||||||| | ||||||| ||| || | ||||||||||||||||||||||    
T  25952368 gttccaatatatatgaaagattgtaatgaagaattataattgttggtgaagagttacaactttt 25952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 18494163 - 18494093
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||  | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  18494163 acttgaatcaatgtcatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 18494093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 26981861 - 26981791
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | | |||| ||||||||||||    
T  26981861 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccgtatatacttgaatcaat 26981791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 34108449 - 34108519
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||  | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  34108449 acttgaatcaatgtcatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 34108519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 14318501 - 14318452
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  14318501 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 14318452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 18494063 - 18494014
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  18494063 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 18494014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 26981761 - 26981712
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  26981761 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 26981712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 26986875 - 26986826
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  26986875 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 26986826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 34108549 - 34108598
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  34108549 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 34108598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 8e-35; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 4181462 - 4181347
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |||  |||||||||||||||||||| ||||||||||    
T  4181462 caaattaatgcccaaatgtcaaacatttatagtgcattatatgactcttcatatgagagaaaacaccattttgacttgaatcaatgttaaggttcattaa 4181363  T
Q  259 acacccttttgccaaa 274  Q
     ||||| |||||||||    
T  4181362 gcacccctttgccaaa 4181347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 5440359 - 5440244
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  5440359 caaattaaagcccaaatgccaagcatttatagtgcattatatgacccttcacatgagagaaaacacccatttgacttgaatcaatgttatggttcattaa 5440260  T
Q  259 acacccttttgccaaa 274  Q
     ||||| ||| |||||    
T  5440259 tcacccctttcccaaa 5440244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 5449369 - 5449254
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaa 258  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  5449369 caaattaaagcccaaatgccaagcatttatagtgcattatatgacccttcacatgagagaaaacacccatttgacttgaatcaatgttatggttcattaa 5449270  T
Q  259 acacccttttgccaaa 274  Q
     ||||| ||| |||||    
T  5449269 tcacccctttcccaaa 5449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 12856936 - 12857050
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  12856936 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 12857035  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  12857036 acccttttgccaaag 12857050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 14610364 - 14610449
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  14610364 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataagagaatgatgaagaatta 14610449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 12851823 - 12851937
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||||| ||| |||||||| |    
T  12851823 aactaatgcccaaatgtcaagtatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgtcatgattcattaagc 12851922  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  12851923 acccttttgccaaag 12851937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 26051168 - 26051282
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  26051168 aactaatgcctaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 26051267  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  26051268 acccttttgccaaag 26051282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 26056281 - 26056395
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  26056281 aactaatgcctaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 26056380  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  26056381 acccttttgccaaag 26056395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 26060527 - 26060641
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  26060527 aactaatgcctaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 26060626  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  26060627 acccttttgccaaag 26060641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 26065640 - 26065754
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||| |||| |||||||||||||  ||| |||||||| |    
T  26065640 aactaatgcctaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagc 26065739  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  26065740 acccttttgccaaag 26065754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 12851674 - 12851759
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  12851674 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 12851759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 12856789 - 12856874
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  12856789 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 12856874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 26051021 - 26051106
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  26051021 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 26051106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 26056134 - 26056219
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  26056134 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 26056219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 26060380 - 26060465
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  26060380 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 26060465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 26065493 - 26065578
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||| || |||||||    
T  26065493 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatggtgaagaatta 26065578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 367 - 496
Target Start/End: Complemental strand, 37459832 - 37459703
Alignment:
Q  367 ggttcattaagcacccttttgccaaatgttccaatgtatataaaagattctcatgaagagttacaactcttggtgaagagttacaacttttgattctaaa 466  Q
    |||||||||| ||| | ||||||||| ||| |||||||||| || ||||| ||||||||||| |  || |||||||||||||| ||||||||||| ||||    
T  37459832 ggttcattaaacactcatttgccaaaggttacaatgtatatgaatgattcccatgaagagttcctgcttttggtgaagagttaaaacttttgattttaaa 37459733  T
Q  467 gtaattccattattttgaaaatcaccaaca 496  Q
    || ||||||||||||| |||||||| ||||    
T  37459732 gtgattccattattttaaaaatcactaaca 37459703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 11056625 - 11056710
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||| ||||||||||||||  |||||||    
T  11056625 tattttacagatttatggttccaacaattcactcatgcattaaagaattgatggatgatttaaagtaagagaatgataaagaatta 11056710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 496
Target Start/End: Complemental strand, 2248930 - 2248853
Alignment:
Q  419 atgaagagttacaactcttggtgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||  ||||||||||||    
T  2248930 atgaagagttacaactcttgctgaagagttactacttttggttctaaagtgattccattattttagaaatcaccaaca 2248853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 35352495 - 35352422
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaat 88  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||    
T  35352495 tattttatagatttatggttccagcaattcactcatgcattagagaattgatggatggtttatagtaagagaat 35352422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 164 - 280
Target Start/End: Complemental strand, 37459917 - 37459801
Alignment:
Q  164 taatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacc 263  Q
    ||||||||||||| |||  ||||||||||||||||||| |  ||||||||| |||||| || | ||||| ||||||  |||||||||||||||||||||     
T  37459917 taatgcccaaatgtcaagtatttatagtgcattatatgtccattcacatgagagaaaacacgcatttgatttgaattgatgttatggttcattaaacact 37459818  T
Q  264 cttttgccaaagattac 280  Q
    | |||||||||| ||||    
T  37459817 catttgccaaaggttac 37459801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 37460047 - 37459960
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||| ||||||| ||||||||| || |||||| ||||||||||||||  ||||||||||||||||||  |||||||||    
T  37460047 aatattttacagatatatggtttcagcaattcgctaatgcatcagagaattgatggatgatttagagtaagagaatgtgggagaatta 37459960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 4181585 - 4181501
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||| | |||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||    
T  4181585 tattttacgggtttatggttcgagcaat-cactcatgcattagagaattgatggatgatttagattaagagaatgagggagaatta 4181501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5440492 - 5440407
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||  |||||||||||| |||||| |||||||||    
T  5440492 tattttacagatgtatggttccagcaatttactcaagctttagagaattgatcgatgatttagagtaagggaatgagggagaatta 5440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5449502 - 5449417
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||  |||||||||||| |||||| |||||||||    
T  5449502 tattttacagatgtatggttccagcaatttactcaagctttagagaattgatcgatgatttagagtaagggaatgagggagaatta 5449417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 14610512 - 14610590
Alignment:
Q  197 atatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaacacccttttgccaaag 275  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  14610512 atatgactcttcacatgagagaaagcacctctttgacttgaatcaatgccatgattcattaagcacccttttgccaaag 14610590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 12852023 - 12852079
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  12852023 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 12852079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 12857136 - 12857192
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  12857136 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 12857192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 26051368 - 26051424
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  26051368 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26051424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 26056481 - 26056537
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  26056481 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26056537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 26060727 - 26060783
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  26060727 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26060783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 26065840 - 26065896
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  26065840 tgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26065896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 303
Target Start/End: Complemental strand, 35352380 - 35352235
Alignment:
Q  159 caaactaatgcccaaatgccaaacatttatagtgcattatatgactcttc-acatgatagaaaatacccctttgacttgaatcaatgttatggttcatta 257  Q
    |||| ||||||||||||| ||| ||| ||| |||||||||||||| |||| | |||| |||||||  | ||||||||||| |||| | | ||||||||||    
T  35352380 caaattaatgcccaaatgtcaagcatatatggtgcattatatgacccttcaaaatgagagaaaatgtctctttgacttgattcaacgatttggttcatta 35352281  T
Q  258 aacacccttttgccaaagattacgatcttaaacacttgaatcaatg 303  Q
    | ||||| |||  ||||| ||| |||  || |||||||||||||||    
T  35352280 agcacccatttatcaaaggttatgattatatacacttgaatcaatg 35352235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 496
Target Start/End: Complemental strand, 4181330 - 4181276
Alignment:
Q  442 aagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||| |||||||||||| |||||| |||||||||||||| ||||||||||||    
T  4181330 aagagttgcaacttttgattttaaagtgattccattattttggaaatcaccaaca 4181276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 5436736 - 5436692
Alignment:
Q  13 aatattttacagatttatggttccagcaattcactcatgcattag 57  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  5436736 aatattttacagatttatggttcaagcaattcactaatgcattag 5436692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 4181389 - 4181347
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaa 333  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  4181389 acttgaatcaatgttaaggttcattaagcacccctttgccaaa 4181347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 12857007 - 12857077
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  12857007 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 12857077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 14610547 - 14610617
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  14610547 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 14610617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 26051239 - 26051309
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  26051239 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 26051309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 26056352 - 26056422
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  26056352 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 26056422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 26060598 - 26060668
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  26060598 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 26060668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 26065711 - 26065781
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  26065711 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 26065781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 497
Target Start/End: Complemental strand, 35352166 - 35352120
Alignment:
Q  451 aacttttgattctaaagtaattccattattttgaaaatcaccaacat 497  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||    
T  35352166 aacttttgattctaaagtaatttcattatttcggaaatcaccaacat 35352120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 5440286 - 5440217
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaa 360  Q
    ||||||||||||| || |||||| ||| ||||||||| ||||| || |||| ||||||||||| ||||||    
T  5440286 acttgaatcaatgttatggttcattaatcacccctttcccaaaagttatgaccatatacacttaaatcaa 5440217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 5449296 - 5449227
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaa 360  Q
    ||||||||||||| || |||||| ||| ||||||||| ||||| || |||| ||||||||||| ||||||    
T  5449296 acttgaatcaatgttatggttcattaatcacccctttcccaaaagttatgaccatatacacttaaatcaa 5449227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 12851894 - 12851964
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||  | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  12851894 acttgaatcaatgtcatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 12851964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 12857107 - 12857156
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  12857107 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 12857156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 14610647 - 14610696
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  14610647 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 14610696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 26051339 - 26051388
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  26051339 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 26051388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 26056452 - 26056501
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  26056452 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 26056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 26060698 - 26060747
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  26060698 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 26060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 26065811 - 26065860
Alignment:
Q  391 aatgttccaatgtatataaaagattctcatgaagagttacaactcttggt 440  Q
    ||||||||||||||||| || | ||| ||||||||||||||||| |||||    
T  26065811 aatgttccaatgtatatgaatggttcccatgaagagttacaacttttggt 26065860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 35352289 - 35352236
Alignment:
Q  308 ggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||| ||||||||| |||  ||||||| ||||| ||||||||||||||||||    
T  35352289 ggttcattaagcacccatttatcaaaggttatgattatatacacttgaatcaat 35352236  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 4181389 - 4181329
Alignment:
Q  350 acttgaatcaattcaaaggttcattaagcacccttttgccaaatgttccaatgtatataaa 410  Q
    ||||||||||||   |||||||||||||||||| ||||||||| | | | |||||||||||    
T  4181389 acttgaatcaatgttaaggttcattaagcacccctttgccaaaagattctatgtatataaa 4181329  T

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Target: scaffold0223 (Bit Score: 75; Significance: 3e-34; HSPs: 4)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 2076 - 1962
Alignment:
Q  161 aactaatgcccaaatgccaaacatttatagtgcattatatgactcttcacatgatagaaaatacccctttgacttgaatcaatgttatggttcattaaac 260  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||  ||| |||||||| |    
T  2076 aactaatgcccaaatgtcaagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaagc 1977  T
Q  261 acccttttgccaaag 275  Q
    |||||||||||||||    
T  1976 acccttttgccaaag 1962  T

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Target: scaffold0223; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 2223 - 2138
Alignment:
Q  15 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggaaaatttagagtaagagaatgatggagaatta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||    
T  2223 tattttacagatttatggttccagcaattcactcatgcattagagaattgatggatgatttagaataatagaatgatgaagaatta 2138  T

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Target: scaffold0223; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 1876 - 1820
Alignment:
Q  440 tgaagagttacaacttttgattctaaagtaattccattattttgaaaatcaccaaca 496  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  1876 tgaagagatacaacttttggttctaaagtgattccattattttgaaaatcaccaaca 1820  T

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Target: scaffold0223; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 2005 - 1935
Alignment:
Q  291 acttgaatcaatgctaaggttcactaagcacccctttgccaaaggtcatgatcatatacacttgaatcaat 361  Q
    |||||||||||||| | | |||| ||||||||| |||||||||||| || | |||||| ||||||||||||    
T  2005 acttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttgaatcaat 1935  T

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