View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18157_low_3 (Length: 703)

Name: NF18157_low_3
Description: NF18157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18157_low_3
NF18157_low_3
[»] chr8 (49 HSPs)
chr8 (100-206)||(32678471-32678578)
chr8 (101-206)||(27621222-27621336)
chr8 (99-206)||(35260149-35260265)
chr8 (101-206)||(11044149-11044263)
chr8 (101-206)||(27752678-27752792)
chr8 (100-206)||(11992820-11992935)
chr8 (100-172)||(44411163-44411235)
chr8 (101-206)||(3100045-3100159)
chr8 (98-206)||(37598161-37598278)
chr8 (100-206)||(35344459-35344575)
chr8 (101-206)||(31132986-31133098)
chr8 (101-172)||(39187365-39187436)
chr8 (99-172)||(25321539-25321612)
chr8 (97-168)||(37566448-37566519)
chr8 (112-202)||(44052717-44052816)
chr8 (101-206)||(24612432-24612549)
chr8 (101-172)||(34713663-34713734)
chr8 (271-313)||(3099938-3099980)
chr8 (271-313)||(11992713-11992755)
chr8 (271-313)||(27621115-27621157)
chr8 (271-313)||(31133163-31133205)
chr8 (271-313)||(34713513-34713555)
chr8 (271-313)||(37567565-37567607)
chr8 (271-313)||(44052606-44052648)
chr8 (271-313)||(44358625-44358667)
chr8 (101-158)||(2238550-2238607)
chr8 (271-313)||(35260042-35260084)
chr8 (271-313)||(37598055-37598097)
chr8 (271-313)||(39187218-39187260)
chr8 (271-313)||(44411343-44411385)
chr8 (272-313)||(25321721-25321762)
chr8 (272-313)||(27752571-27752612)
chr8 (272-313)||(32678644-32678685)
chr8 (272-313)||(33851158-33851199)
chr8 (272-313)||(36538043-36538084)
chr8 (127-172)||(36538193-36538238)
chr8 (101-172)||(35346260-35346330)
chr8 (171-206)||(41426431-41426466)
chr8 (100-169)||(12108293-12108363)
chr8 (271-313)||(24612614-24612656)
chr8 (271-313)||(35346438-35346480)
chr8 (271-313)||(40487799-40487841)
chr8 (271-312)||(2238727-2238768)
chr8 (271-312)||(11044043-11044084)
chr8 (101-158)||(24510652-24510709)
chr8 (271-312)||(41426325-41426366)
chr8 (271-304)||(35344361-35344394)
chr8 (101-161)||(16644187-16644247)
chr8 (101-161)||(26483677-26483736)
[»] chr2 (52 HSPs)
chr2 (99-206)||(10979258-10979374)
chr2 (101-206)||(792309-792423)
chr2 (101-206)||(21539846-21539960)
chr2 (98-206)||(14565323-14565440)
chr2 (100-206)||(4092100-4092215)
chr2 (100-206)||(10478267-10478382)
chr2 (100-206)||(35832501-35832616)
chr2 (101-172)||(38071403-38071474)
chr2 (98-172)||(43075881-43075955)
chr2 (100-206)||(33635425-33635540)
chr2 (100-206)||(38549595-38549710)
chr2 (98-172)||(15858639-15858713)
chr2 (101-172)||(28424405-28424476)
chr2 (100-206)||(28492609-28492724)
chr2 (101-172)||(43451637-43451708)
chr2 (98-172)||(38564667-38564741)
chr2 (101-202)||(44803991-44804101)
chr2 (115-172)||(5091507-5091564)
chr2 (100-169)||(29514427-29514496)
chr2 (100-206)||(8784484-8784600)
chr2 (101-169)||(29513973-29514040)
chr2 (271-312)||(792488-792529)
chr2 (271-312)||(15858742-15858783)
chr2 (272-312)||(14565506-14565546)
chr2 (271-313)||(5091672-5091714)
chr2 (271-313)||(8784377-8784419)
chr2 (108-158)||(13822727-13822777)
chr2 (271-313)||(21539739-21539781)
chr2 (271-313)||(22162302-22162344)
chr2 (271-313)||(28424256-28424298)
chr2 (271-313)||(28492502-28492544)
chr2 (271-313)||(35832394-35832436)
chr2 (271-313)||(43075732-43075774)
chr2 (271-312)||(15068718-15068759)
chr2 (100-161)||(35517270-35517331)
chr2 (271-312)||(38549775-38549816)
chr2 (271-312)||(44803881-44803922)
chr2 (271-313)||(4033807-4033849)
chr2 (100-161)||(18833861-18833923)
chr2 (271-313)||(29514151-29514193)
chr2 (271-313)||(29514607-29514649)
chr2 (271-312)||(4091994-4092035)
chr2 (271-312)||(9294638-9294679)
chr2 (272-313)||(10478160-10478201)
chr2 (272-313)||(33635318-33635359)
chr2 (272-313)||(38071571-38071612)
chr2 (272-313)||(43451487-43451528)
chr2 (171-206)||(13822802-13822837)
chr2 (171-206)||(18833942-18833977)
chr2 (99-161)||(29523992-29524054)
chr2 (271-312)||(13822902-13822943)
chr2 (101-161)||(8701749-8701808)
[»] chr3 (48 HSPs)
chr3 (100-206)||(26641027-26641142)
chr3 (97-206)||(21654335-21654453)
chr3 (97-206)||(32322151-32322269)
chr3 (98-202)||(53020277-53020390)
chr3 (99-206)||(55400828-55400944)
chr3 (101-172)||(34022732-34022803)
chr3 (98-172)||(37323996-37324070)
chr3 (101-206)||(16739081-16739190)
chr3 (114-172)||(46580668-46580726)
chr3 (115-172)||(31126345-31126402)
chr3 (97-169)||(13541369-13541441)
chr3 (100-206)||(51426709-51426824)
chr3 (99-206)||(46295990-46296107)
chr3 (110-206)||(45347638-45347743)
chr3 (108-172)||(46820167-46820231)
chr3 (101-172)||(49068184-49068255)
chr3 (101-206)||(52252126-52252237)
chr3 (99-172)||(23514574-23514648)
chr3 (118-206)||(1335200-1335297)
chr3 (271-313)||(13541260-13541302)
chr3 (271-313)||(21654228-21654270)
chr3 (99-161)||(36188920-36188982)
chr3 (271-313)||(37324179-37324221)
chr3 (271-313)||(55400721-55400763)
chr3 (115-172)||(43576090-43576147)
chr3 (101-169)||(51255322-51255390)
chr3 (121-172)||(28793295-28793346)
chr3 (271-313)||(1335093-1335135)
chr3 (271-313)||(31126195-31126237)
chr3 (271-313)||(49068034-49068076)
chr3 (271-313)||(53020166-53020208)
chr3 (272-313)||(46820032-46820073)
chr3 (271-313)||(23513550-23513592)
chr3 (271-313)||(26641207-26641249)
chr3 (112-162)||(45782321-45782371)
chr3 (271-313)||(46580519-46580561)
chr3 (101-205)||(51309504-51309618)
chr3 (271-313)||(51426602-51426644)
chr3 (271-312)||(36189101-36189142)
chr3 (272-313)||(43575940-43575981)
chr3 (272-313)||(45781380-45781421)
chr3 (272-313)||(46296173-46296214)
chr3 (272-313)||(51255169-51255210)
chr3 (272-313)||(52172106-52172147)
chr3 (280-313)||(52252019-52252052)
chr3 (99-161)||(2927441-2927503)
chr3 (99-161)||(37042328-37042390)
chr3 (284-313)||(16739263-16739292)
[»] chr1 (63 HSPs)
chr1 (100-206)||(23873783-23873898)
chr1 (100-206)||(46949410-46949525)
chr1 (100-206)||(49924508-49924623)
chr1 (101-206)||(26907048-26907162)
chr1 (101-206)||(28916473-28916586)
chr1 (98-206)||(25990837-25990954)
chr1 (99-206)||(40935568-40935684)
chr1 (100-206)||(40960430-40960545)
chr1 (101-206)||(18036633-18036747)
chr1 (98-206)||(39026199-39026317)
chr1 (98-206)||(18852312-18852429)
chr1 (99-172)||(28017788-28017861)
chr1 (99-206)||(29488837-29488953)
chr1 (101-206)||(18913301-18913416)
chr1 (100-206)||(43655993-43656108)
chr1 (101-172)||(44875311-44875382)
chr1 (110-167)||(35941978-35942035)
chr1 (101-169)||(40220194-40220262)
chr1 (101-206)||(31970266-31970380)
chr1 (99-206)||(38942395-38942512)
chr1 (100-206)||(15311266-15311381)
chr1 (98-161)||(36037380-36037443)
chr1 (101-206)||(15285892-15286005)
chr1 (110-206)||(35189290-35189396)
chr1 (99-172)||(4529308-4529380)
chr1 (98-172)||(45357829-45357905)
chr1 (101-172)||(9128175-9128246)
chr1 (118-172)||(47997086-47997140)
chr1 (98-172)||(6848264-6848337)
chr1 (271-313)||(25990730-25990772)
chr1 (99-172)||(26479871-26479945)
chr1 (271-313)||(28017640-28017682)
chr1 (271-313)||(43656173-43656215)
chr1 (271-313)||(44875161-44875203)
chr1 (272-313)||(23873964-23874005)
chr1 (271-313)||(6848442-6848484)
chr1 (271-313)||(15285786-15285828)
chr1 (271-313)||(18036526-18036568)
chr1 (271-313)||(28916651-28916693)
chr1 (271-312)||(4529170-4529211)
chr1 (272-313)||(18913483-18913524)
chr1 (272-313)||(31970446-31970487)
chr1 (272-313)||(40935750-40935791)
chr1 (100-156)||(36384076-36384132)
chr1 (271-307)||(40220044-40220080)
chr1 (271-313)||(9128025-9128067)
chr1 (271-313)||(18852205-18852247)
chr1 (271-313)||(26479721-26479763)
chr1 (271-313)||(26907225-26907267)
chr1 (271-313)||(35941823-35941865)
chr1 (271-313)||(38942577-38942619)
chr1 (271-313)||(46949303-46949345)
chr1 (271-313)||(47996936-47996978)
chr1 (100-161)||(24728579-24728640)
chr1 (272-313)||(40960611-40960652)
chr1 (280-313)||(49924401-49924434)
chr1 (272-312)||(39026383-39026423)
chr1 (98-161)||(24190616-24190678)
chr1 (171-206)||(40220145-40220180)
chr1 (271-313)||(29488730-29488772)
chr1 (271-312)||(36383912-36383952)
chr1 (284-313)||(45358025-45358054)
chr1 (101-161)||(44148790-44148850)
[»] chr6 (22 HSPs)
chr6 (101-206)||(30766535-30766649)
chr6 (100-172)||(10228044-10228116)
chr6 (100-206)||(17721762-17721877)
chr6 (101-172)||(5121410-5121481)
chr6 (101-206)||(12278795-12278909)
chr6 (101-206)||(374188-374302)
chr6 (100-206)||(30949224-30949339)
chr6 (100-152)||(17599464-17599516)
chr6 (101-172)||(31887074-31887146)
chr6 (271-313)||(10227894-10227936)
chr6 (271-313)||(17598275-17598317)
chr6 (271-312)||(17721942-17721983)
chr6 (272-313)||(30949117-30949158)
chr6 (272-313)||(31887255-31887296)
chr6 (271-313)||(374081-374123)
chr6 (271-313)||(12278688-12278730)
chr6 (271-313)||(33756238-33756280)
chr6 (100-161)||(7274828-7274889)
chr6 (98-161)||(21542565-21542628)
chr6 (116-158)||(32882660-32882702)
chr6 (271-309)||(32882826-32882864)
chr6 (272-304)||(30766437-30766469)
[»] chr4 (54 HSPs)
chr4 (100-205)||(29180331-29180445)
chr4 (100-206)||(30776403-30776518)
chr4 (101-206)||(39969909-39970023)
chr4 (100-206)||(10591422-10591537)
chr4 (97-172)||(38187644-38187719)
chr4 (101-206)||(50768531-50768645)
chr4 (101-172)||(9797995-9798066)
chr4 (98-172)||(43980627-43980701)
chr4 (102-172)||(49902156-49902226)
chr4 (100-171)||(3043086-3043157)
chr4 (101-206)||(30777573-30777688)
chr4 (112-206)||(37788537-37788640)
chr4 (101-202)||(29899805-29899915)
chr4 (105-205)||(53677403-53677512)
chr4 (100-172)||(28681788-28681860)
chr4 (105-172)||(55937627-55937694)
chr4 (99-172)||(51495278-51495350)
chr4 (110-206)||(47807281-47807385)
chr4 (271-313)||(3043266-3043308)
chr4 (271-313)||(10591602-10591644)
chr4 (271-313)||(38940848-38940890)
chr4 (132-205)||(38940956-38941038)
chr4 (271-313)||(39970088-39970130)
chr4 (271-313)||(43980477-43980519)
chr4 (271-313)||(51495128-51495170)
chr4 (271-313)||(53677578-53677620)
chr4 (116-172)||(32012261-32012318)
chr4 (271-312)||(47807175-47807216)
chr4 (272-313)||(52713042-52713083)
chr4 (271-313)||(9798174-9798216)
chr4 (271-313)||(32012426-32012468)
chr4 (271-313)||(38187825-38187867)
chr4 (271-313)||(49902006-49902048)
chr4 (99-157)||(51495372-51495429)
chr4 (272-313)||(27750448-27750489)
chr4 (271-312)||(29180511-29180552)
chr4 (272-313)||(29899694-29899735)
chr4 (271-312)||(30776583-30776624)
chr4 (271-312)||(30777467-30777508)
chr4 (272-313)||(37788430-37788471)
chr4 (272-313)||(50768424-50768465)
chr4 (271-313)||(1620008-1620050)
chr4 (101-205)||(5222212-5222326)
chr4 (100-172)||(1620158-1620231)
chr4 (100-161)||(48793576-48793637)
chr4 (280-313)||(55937811-55937844)
chr4 (272-312)||(5222393-5222433)
chr4 (101-161)||(47868024-47868084)
chr4 (171-206)||(52713141-52713176)
chr4 (171-205)||(17236295-17236329)
chr4 (99-161)||(39078301-39078363)
chr4 (271-312)||(30012051-30012091)
chr4 (271-312)||(40553754-40553795)
chr4 (101-161)||(2229392-2229452)
[»] chr7 (72 HSPs)
chr7 (100-206)||(43107816-43107931)
chr7 (101-206)||(18206231-18206345)
chr7 (101-206)||(35181280-35181394)
chr7 (101-206)||(19932967-19933081)
chr7 (98-206)||(21654030-21654147)
chr7 (101-172)||(3157567-3157638)
chr7 (100-172)||(23106584-23106656)
chr7 (101-172)||(41889302-41889373)
chr7 (101-206)||(42617759-42617874)
chr7 (100-172)||(47383537-47383609)
chr7 (110-172)||(22111250-22111313)
chr7 (110-172)||(40583276-40583339)
chr7 (100-172)||(9818599-9818671)
chr7 (100-172)||(10720524-10720596)
chr7 (112-172)||(32491030-32491090)
chr7 (99-202)||(41815603-41815715)
chr7 (100-167)||(40560518-40560585)
chr7 (101-172)||(48879519-48879590)
chr7 (100-204)||(44600536-44600649)
chr7 (101-206)||(7989219-7989334)
chr7 (100-157)||(29235980-29236037)
chr7 (110-206)||(41890165-41890269)
chr7 (104-202)||(48937805-48937911)
chr7 (271-313)||(23106434-23106476)
chr7 (104-206)||(23731648-23731761)
chr7 (271-313)||(43107996-43108038)
chr7 (271-313)||(45598885-45598927)
chr7 (101-172)||(45599036-45599109)
chr7 (98-205)||(35084009-35084126)
chr7 (100-157)||(40593964-40594021)
chr7 (271-313)||(3157417-3157459)
chr7 (271-313)||(35181173-35181215)
chr7 (271-313)||(47383387-47383429)
chr7 (271-313)||(48937980-48938022)
chr7 (271-313)||(48943006-48943048)
chr7 (272-313)||(19933147-19933188)
chr7 (272-313)||(19964286-19964327)
chr7 (272-313)||(23731541-23731582)
chr7 (271-312)||(30082335-30082376)
chr7 (271-312)||(36576400-36576441)
chr7 (272-313)||(40560363-40560404)
chr7 (271-312)||(48879370-48879411)
chr7 (110-157)||(18800688-18800735)
chr7 (111-158)||(30082496-30082543)
chr7 (271-313)||(21654212-21654254)
chr7 (271-313)||(22111421-22111463)
chr7 (271-313)||(34808200-34808242)
chr7 (271-313)||(40583126-40583168)
chr7 (271-313)||(41889152-41889194)
chr7 (272-313)||(32491199-32491240)
chr7 (138-206)||(34808307-34808384)
chr7 (271-312)||(44600428-44600469)
chr7 (272-312)||(35084193-35084233)
chr7 (282-313)||(9818460-9818491)
chr7 (282-313)||(10720385-10720416)
chr7 (98-161)||(18102677-18102740)
chr7 (98-161)||(25737577-25737640)
chr7 (134-172)||(36576548-36576585)
chr7 (271-313)||(41890333-41890375)
chr7 (271-313)||(42617652-42617694)
chr7 (280-313)||(18206419-18206452)
chr7 (271-312)||(18800865-18800906)
chr7 (146-206)||(19964151-19964220)
chr7 (271-304)||(28608363-28608396)
chr7 (271-312)||(33153021-33153062)
chr7 (271-312)||(39337512-39337553)
chr7 (271-312)||(41815784-41815825)
chr7 (101-161)||(14806016-14806076)
chr7 (101-161)||(15253010-15253070)
chr7 (272-308)||(28941284-28941320)
chr7 (271-307)||(39348776-39348812)
chr7 (101-161)||(46760210-46760270)
[»] chr5 (39 HSPs)
chr5 (101-206)||(31316755-31316869)
chr5 (100-206)||(25962401-25962516)
chr5 (98-172)||(35462670-35462744)
chr5 (104-203)||(8541521-8541629)
chr5 (100-206)||(20914950-20915065)
chr5 (101-206)||(8145967-8146081)
chr5 (101-206)||(16286037-16286151)
chr5 (101-206)||(42365126-42365240)
chr5 (100-206)||(24432353-24432468)
chr5 (100-202)||(31690573-31690684)
chr5 (101-169)||(12639026-12639093)
chr5 (100-172)||(13146863-13146935)
chr5 (98-169)||(30086497-30086569)
chr5 (101-206)||(36413890-36414004)
chr5 (271-313)||(8146146-8146188)
chr5 (271-313)||(31690753-31690795)
chr5 (271-313)||(42365019-42365061)
chr5 (272-313)||(8541698-8541739)
chr5 (271-313)||(13146713-13146755)
chr5 (99-161)||(25841011-25841073)
chr5 (271-313)||(30086681-30086723)
chr5 (130-203)||(37066206-37066288)
chr5 (271-313)||(37066356-37066398)
chr5 (272-313)||(20914843-20914884)
chr5 (110-158)||(2002098-2002146)
chr5 (272-312)||(24432534-24432574)
chr5 (100-152)||(24439726-24439778)
chr5 (271-312)||(2002266-2002307)
chr5 (272-313)||(31316935-31316976)
chr5 (98-161)||(42273794-42273855)
chr5 (98-161)||(12792738-12792800)
chr5 (171-206)||(24439663-24439698)
chr5 (271-313)||(12638873-12638915)
chr5 (271-313)||(17825331-17825373)
chr5 (271-313)||(35462851-35462893)
chr5 (272-313)||(16286217-16286258)
chr5 (271-312)||(24439558-24439598)
chr5 (280-313)||(25962594-25962627)
chr5 (98-161)||(20644161-20644225)
[»] scaffold0495 (2 HSPs)
scaffold0495 (100-172)||(4762-4834)
scaffold0495 (271-313)||(4613-4654)
[»] scaffold0300 (1 HSPs)
scaffold0300 (101-161)||(527-587)


Alignment Details
Target: chr8 (Bit Score: 92; Significance: 3e-44; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 32678471 - 32678578
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgataattttttgtgttcttcttggaataa 198  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32678471 atactccctccgtcctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgataattttttgtgttcttcttggaataa 32678570  T
Q  199 gtttcatg 206  Q
    ||||||||    
T  32678571 gtttcatg 32678578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 27621336 - 27621222
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  27621336 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctactt 27621237  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  27621236 ggaataagtttcatg 27621222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 35260265 - 35260149
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         || |||||||||||||| |    
T  35260265 tatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctcc 35260166  T
Q  190 ttggaataagtttcatg 206  Q
    |||||||||||||||||    
T  35260165 ttggaataagtttcatg 35260149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 11044263 - 11044149
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  11044263 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 11044164  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  11044163 ggaataagtttcatg 11044149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 27752792 - 27752678
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  27752792 tactccctccgtcctgatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 27752693  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  27752692 ggaataagtttcatg 27752678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 11992935 - 11992820
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||| ||    
T  11992935 atactccctccgtcctaatttataagtaaaaaacactaattcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 11992836  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  11992835 tggaataagtttcatg 11992820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 44411163 - 44411235
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44411163 atactccttccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 44411235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 3100159 - 3100045
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         |||||||||||||||||  ||    
T  3100159 tactccctccgtcttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgtt 3100060  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  3100059 ggaataagtttcatg 3100045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 37598278 - 37598161
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||         |||||||||||||||||     
T  37598278 atatactccctccgtcctaatttataagcaaaaaacactaattcacggttattaagaaaactaacacttactgatttgaggtataattttttgtgttctc 37598179  T
Q  189 cttggaataagtttcatg 206  Q
    |||| |||||||||||||    
T  37598178 cttgaaataagtttcatg 37598161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 35344575 - 35344459
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |    
T  35344575 atactccctacgtcctaatttataagcaaaaaaactctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 35344476  T
Q  190 ttggaataagtttcatg 206  Q
    ||| |||||||||||||    
T  35344475 ttgaaataagtttcatg 35344459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 31132986 - 31133098
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  31132986 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 31133083  T
Q  192 ggaataagtttcatg 206  Q
    ||||||| |||||||    
T  31133084 ggaataaatttcatg 31133098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 39187436 - 39187365
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39187436 tactccctccgtcataatttataagcaaaaaacactaattcacgcttattaagaaaactaacacttagtgat 39187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 25321539 - 25321612
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  25321539 tatactccctccgtcctaatttataagcaaaaaacactaattcacacttatttagaaaactaacatttggtgat 25321612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 37566448 - 37566519
Alignment:
Q  97 catatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttag 168  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  37566448 catacactccctccgtcctaatttataagcaaaaaacactaattcacacttattaaaaaaactaatacttag 37566519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 44052816 - 44052717
Alignment:
Q  112 tcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagttt 202  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||         ||||||||||||||||| ||||||||||||||    
T  44052816 tcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaataagttt 44052717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 24612432 - 24612549
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaa---aacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    |||||||| | | |||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||         |||||||||| ||||||     
T  24612432 tactccctccattctaatttataagcaaaaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctc 24612531  T
Q  189 cttggaataagtttcatg 206  Q
    ||||||||||||||||||    
T  24612532 cttggaataagtttcatg 24612549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 34713734 - 34713663
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| |||||||| ||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||    
T  34713734 tactccctccgtcctaagttataagtaaaaaatactaattcacatttattaagaaaactaatacttagtgat 34713663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 3099980 - 3099938
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3099980 gaatgcaatttgcatttaattttacattggaaaagatgatttg 3099938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 11992755 - 11992713
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11992755 gaatgcaatttgcatttaattttacattggaaaagatgatttg 11992713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 27621157 - 27621115
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27621157 gaatgcaatttgcatttaattttacattggaaaagatgatttg 27621115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 31133163 - 31133205
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31133163 gaatgcaatttgcatttaattttacattggaaaagatgatttg 31133205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 34713555 - 34713513
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34713555 gaatgcaatttgcatttaattttacattggaaaagatgatttg 34713513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 37567565 - 37567607
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37567565 gaatgcaatttgcatttaattttacattggaaaagatgatttg 37567607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 44052648 - 44052606
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44052648 gaatgcaatttgcatttaattttacattggaaaagatgatttg 44052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 44358625 - 44358667
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44358625 gaatgcaatttgcatttaattttacattggaaaagatgatttg 44358667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 2238550 - 2238607
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaac 158  Q
    |||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  2238550 tactccctccgtctcaatttataagcaaaaaacacaaattcacacttattaagaaaac 2238607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 35260084 - 35260042
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  35260084 gaatggaatttgcatttaattttacattggaaaagatgatttg 35260042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 37598097 - 37598055
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  37598097 gaatgcaatttgcatttaattttacattggaaaaaatgatttg 37598055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 39187260 - 39187218
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  39187260 gaatgcaatttgcatttaattttacattggaaatgatgatttg 39187218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 44411343 - 44411385
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  44411343 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 44411385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 25321721 - 25321762
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  25321721 aatgcaacttgcatttaattttacattggaaaagatgatttg 25321762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 27752612 - 27752571
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  27752612 aatgcaacttgcatttaattttacattggaaaagatgatttg 27752571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 32678644 - 32678685
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  32678644 aatgcaacttgcatttaattttacattggaaaagatgatttg 32678685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 33851158 - 33851199
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  33851158 aatgcaacttgcatttaattttacattggaaaagatgatttg 33851199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 36538084 - 36538043
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  36538084 aatgcaaattgcatttaattttacattggaaaagatgatttg 36538043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 36538238 - 36538193
Alignment:
Q  127 aaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  36538238 aaaaaacactaattcacatttattaagaaaactaacatttagtgat 36538193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 35346260 - 35346330
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||| | |||||||||||||||| ||||||| |||||||||| |||||||||||| ||| | ||||||||    
T  35346260 tactccttccgtcctaatttataag-aaaaaactctaattcacatttattaagaaaattaatatttagtgat 35346330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 41426466 - 41426431
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||||||||||||||||||||||||||||    
T  41426466 ataattttttgtgttcttcttggaataagtttcatg 41426431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 12108363 - 12108293
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaac-actaattcacacttattaagaaaactaacacttagt 169  Q
    ||||||||| ||| |||||||||||| ||||||  | |||||| ||||||||||||||||||||| |||||    
T  12108363 atactccctccgttctaatttataagaaaaaaaatattaattctcacttattaagaaaactaacatttagt 12108293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 24612614 - 24612656
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  24612614 gaatgcaacttgcatttaattttacattgaaaaagatgatttg 24612656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 35346438 - 35346480
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  35346438 gaatgcaatttgcattcaattttacattgaaaaagatgatttg 35346480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 40487799 - 40487841
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  40487799 gaatgcaacttgcattgaattttacattggaaaagatgatttg 40487841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 2238727 - 2238768
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  2238727 gaatgcgatttgcatttaattttactttggaaaagatgattt 2238768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 11044084 - 11044043
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  11044084 gaatgcaacttgcatttaattttacattggaaaatatgattt 11044043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 24510652 - 24510709
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaac 158  Q
    |||||||| | ||| |||||||||||||||||||  |||||||||||||||| |||||    
T  24510652 tactccctccatcccaatttataagcaaaaaacataaattcacacttattaataaaac 24510709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 41426366 - 41426325
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  41426366 gaatgcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 304
Target Start/End: Complemental strand, 35344394 - 35344361
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaa 304  Q
    ||||||||||||||||||||||||||||| ||||    
T  35344394 gaatgcaatttgcatttaattttacattgaaaaa 35344361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 16644247 - 16644187
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| |||||| ||| ||||||||  ||||||||||||||| ||| |||||    
T  16644247 tactccctccgtccaaatttacaagaaaaaaacatcaattcacacttattaggaagactaa 16644187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 26483736 - 26483677
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| || ||||||| ||||||||  ||| |||||||||||||||||||||    
T  26483736 tactccctccgtcccaaattataagaaaaaaacaaaaat-cacacttattaagaaaactaa 26483677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 10979374 - 10979258
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||    
T  10979374 tatactccctccgtcctaatttataagcaaaaaacactaattcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttc 10979275  T
Q  190 ttggaataagtttcatg 206  Q
    |||||||||||||||||    
T  10979274 ttggaataagtttcatg 10979258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 792309 - 792423
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  792309 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 792408  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  792409 ggaataagtttcatg 792423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 21539960 - 21539846
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  21539960 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 21539861  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  21539860 ggaataagtttcatg 21539846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 14565323 - 14565440
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||||||     
T  14565323 atatactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 14565422  T
Q  189 cttggaataagtttcatg 206  Q
    ||||||||||||||||||    
T  14565423 cttggaataagtttcatg 14565440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 4092215 - 4092100
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  4092215 atactccctccgttctaatttataagcaaaaaacactacttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 4092116  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  4092115 tggaataagtttcatg 4092100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 10478382 - 10478267
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  10478382 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctcct 10478283  T
Q  191 tggaataagtttcatg 206  Q
    || |||||||||||||    
T  10478282 tgaaataagtttcatg 10478267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 35832616 - 35832501
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  35832616 atactccctccatcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 35832517  T
Q  191 tggaataagtttcatg 206  Q
    |||||||| |||||||    
T  35832516 tggaataaatttcatg 35832501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 38071403 - 38071474
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38071403 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 38071474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 43075955 - 43075881
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43075955 atatactccctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgat 43075881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 33635540 - 33635425
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||         ||||||||||||||| ||||    
T  33635540 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgagatataattttttgtgtttttct 33635441  T
Q  191 tggaataagtttcatg 206  Q
    |||||||| |||||||    
T  33635440 tggaataaatttcatg 33635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 38549595 - 38549710
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||| |||| ||    
T  38549595 atactccctctgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctcct 38549694  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  38549695 tggaataagtttcatg 38549710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 15858639 - 15858713
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15858639 atatactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaatacttagtgat 15858713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 28424476 - 28424405
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  28424476 tactccctccgtcctaatttataagcaaaaaacactaattgatacttattaagaaaactaacacttagtgat 28424405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 28492724 - 28492609
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||         ||||||||||||||||| ||    
T  28492724 atactccattcatcctaatttataagcaaaaagcactaaatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctcct 28492625  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  28492624 tggaataagtttcatg 28492609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 43451708 - 43451637
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  43451708 tactccctccgtcctaatttataagcaaaaaatactaattcatacttattaagaaaactaacatttagtgat 43451637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 38564667 - 38564741
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||    
T  38564667 atatactccctccgtcctaatttataaacaaaaaacgataattcacacttattaagaaaactaacatttagtgat 38564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 44804101 - 44803991
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||         ||||||||||||||||| |||    
T  44804101 tacttcctccgtcctaatttataagcaaacaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcctt 44804002  T
Q  192 ggaataagttt 202  Q
    |||||||||||    
T  44804001 ggaataagttt 44803991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 5091507 - 5091564
Alignment:
Q  115 taatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5091507 taatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgat 5091564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 29514427 - 29514496
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt 169  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  29514427 atactccctccgtcctaatttataagcaaaaaacagtaattcatacttattaaaaaaactaacacttagt 29514496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 8784600 - 8784484
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    ||||||||| |||  |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||         |||||||||||||||||||    
T  8784600 atactccctccgttttaatttataagcaaaaaaacattaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttc 8784501  T
Q  190 ttggaataagtttcatg 206  Q
    ||| |||||||||||||    
T  8784500 ttgaaataagtttcatg 8784484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 29513973 - 29514040
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt 169  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  29513973 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaa-taacacttagt 29514040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 792488 - 792529
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  792488 gaatgcaatttgcatttaattttacattggaaaagatgattt 792529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 15858742 - 15858783
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15858742 gaatgcaatttgcatttaattttacattggaaaagatgattt 15858783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 14565506 - 14565546
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14565506 aatgcaatttgcatttaattttacattggaaaagatgattt 14565546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 5091672 - 5091714
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  5091672 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 5091714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 8784419 - 8784377
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  8784419 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 8784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 13822727 - 13822777
Alignment:
Q  108 ttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaac 158  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||||||||    
T  13822727 ttcgtcccaatttataagcaaaaaatacaaattcacacttattaagaaaac 13822777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 21539781 - 21539739
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  21539781 gaatgcaacttgcatttaattttacattggaaaagatgatttg 21539739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 22162344 - 22162302
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  22162344 gaatgcaatttgcatttaattttacattggaaaagattatttg 22162302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 28424298 - 28424256
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  28424298 gaatacaatttgcatttaattttacattggaaaagatgatttg 28424256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 28492544 - 28492502
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  28492544 gaatgcaatttgcatttaattttacattggaaaaaatgatttg 28492502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 35832436 - 35832394
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  35832436 gaatgcaatttgcatttaattttatattggaaaagatgatttg 35832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 43075774 - 43075732
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  43075774 gaatgcaatttgcatttaattttacattggaatagatgatttg 43075732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 15068759 - 15068718
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  15068759 gaatgcaatttgcatttaattttactttggaaaagatgattt 15068718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 35517331 - 35517270
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||||||||||| ||||||||||||||    || ||||||||||||||||||||||    
T  35517331 atactcccttcgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 35517270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 38549775 - 38549816
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38549775 gaatgcaacttgcatttaattttacattggaaaagatgattt 38549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 44803922 - 44803881
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  44803922 gaatgcaatttgtatttaattttacattggaaaagatgattt 44803881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 4033807 - 4033849
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  4033807 gaatgcaatttgcatttaattttacattgaaaaagatgttttg 4033849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 18833861 - 18833923
Alignment:
Q  100 atactcccttcgtcctaatttataagc-aaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||| ||||||||||||||||| |||||| || | |||||||||||||||||| ||||    
T  18833861 atactccctccgtcctaatttataagcaaaaaaatacaatttcacacttattaagaaagctaa 18833923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 29514151 - 29514193
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  29514151 gaatgcaatttgcatttaattttacattaaaaaagatgatttg 29514193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 29514607 - 29514649
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||| |||||||||||||||||| ||||||||||||    
T  29514607 gaatgcaatttacatttaattttacattgggaaagatgatttg 29514649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 4092035 - 4091994
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  4092035 gaatgcaacttgcatttaattttacattgaaaaagatgattt 4091994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 9294679 - 9294638
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  9294679 gaatgcaatttgcatttaattttactttgaaaaagatgattt 9294638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 10478201 - 10478160
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  10478201 aatgcaacttgcatttaattttacattggaaaagatcatttg 10478160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 33635359 - 33635318
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  33635359 aatgcaacttgcatttaattttacattagaaaagatgatttg 33635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 38071571 - 38071612
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  38071571 aatgcaatttgtatataattttacattggaaaagatgatttg 38071612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 43451528 - 43451487
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  43451528 aatgcaacttgcatttaattttacattgaaaaagatgatttg 43451487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 13822802 - 13822837
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||||||||||||| ||||||||||||||    
T  13822802 ataattttttgtgttcttcttagaataagtttcatg 13822837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 18833942 - 18833977
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||||||| ||||||||||||||||||||    
T  18833942 ataattttttgtgttattcttggaataagtttcatg 18833977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 29523992 - 29524054
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||| |||||||| ||||||||||||||    || |||||||||||| |||||||||    
T  29523992 tatactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattatgaaaactaa 29524054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 13822902 - 13822943
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||    
T  13822902 gaatgcaatttgcatttaattttactttgaaaaagattattt 13822943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 8701808 - 8701749
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| || |||||||||||||| || || |||| |||||||||||||||||    
T  8701808 tactccctccgtcccaaattataagcaaaaaa-acaaaatcacgcttattaagaaaactaa 8701749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 9e-35; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 26641027 - 26641142
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  26641027 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 26641126  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  26641127 tggaataagtttcatg 26641142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 21654453 - 21654335
Alignment:
Q  97 catatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttct 187  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||    
T  21654453 catatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 21654354  T
Q  188 tcttggaataagtttcatg 206  Q
     |||| |||||||||||||    
T  21654353 ccttgaaataagtttcatg 21654335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 32322151 - 32322269
Alignment:
Q  97 catatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttct 187  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         |||||||||||||||||    
T  32322151 catatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttct 32322250  T
Q  188 tcttggaataagtttcatg 206  Q
     ||||||||||||||||||    
T  32322251 ccttggaataagtttcatg 32322269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 53020390 - 53020277
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||    
T  53020390 atatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgagttataattttttgtgttctt 53020291  T
Q  189 cttggaataagttt 202  Q
    ||||||||||||||    
T  53020290 cttggaataagttt 53020277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 55400944 - 55400828
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||      
T  55400944 tatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctct 55400845  T
Q  190 ttggaataagtttcatg 206  Q
    |||||||||||||||||    
T  55400844 ttggaataagtttcatg 55400828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 34022803 - 34022732
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34022803 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgat 34022732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 37323996 - 37324070
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37323996 atatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 37324070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 16739081 - 16739190
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaaca----cttagtgataattttttgtgttcttcttggaat 196  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||     | ||  ||||||| ||||||||| ||||||||    
T  16739081 tactccctccgtcctaatttataagccaaaaacactaattcacacttattaagaaaactaacattatttgaggtataatttgttgtgttctccttggaat 16739180  T
Q  197 aagtttcatg 206  Q
    ||||||||||    
T  16739181 aagtttcatg 16739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 46580726 - 46580668
Alignment:
Q  114 ctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46580726 ctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 46580668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 31126402 - 31126345
Alignment:
Q  115 taatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31126402 taatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 31126345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 13541441 - 13541369
Alignment:
Q  97 catatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt 169  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  13541441 catatactccctccgttctaatttataaccaaaaaacactaattcacacttattaagaaaattaacacttagt 13541369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 51426824 - 51426709
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||||| ||||||         ||||||||||||||||||||    
T  51426824 atactccctccgtcctaatttataagcaaaaaacactaatttacgcttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttcttct 51426725  T
Q  191 tggaataagtttcatg 206  Q
    | |||||| |||||||    
T  51426724 tagaataaatttcatg 51426709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 46295990 - 46296107
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat----------aattttttgtgttctt 188  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||          | |||||||||||||     
T  46295990 tatactccctccgtcctaatttataagtaaaaaatactaattcacacttattaagaaaactaacggttagtgatttgaggtataatttttttgtgttctc 46296089  T
Q  189 cttggaataagtttcatg 206  Q
    ||||||||||||||||||    
T  46296090 cttggaataagtttcatg 46296107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 45347638 - 45347743
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagt 200  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||         || |||||||||||||| ||||||||||||    
T  45347638 cgtcctaatttataagtaaaaaacactaattcatatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagt 45347737  T
Q  201 ttcatg 206  Q
    ||||||    
T  45347738 ttcatg 45347743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 46820231 - 46820167
Alignment:
Q  108 ttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  46820231 ttcgtcctaatttataagtaaaaaccactaattcacatttattaagaaaactaacacttagtgat 46820167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 49068255 - 49068184
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||| || ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  49068255 tactctctccgtcctaatttataagcaaaaaatattaattcacatttattaagaaaactaacacttagtgat 49068184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 52252237 - 52252126
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||| |||||| | ||||||| ||   ||||||||||||||||||||||         |||||||||||||||||||||    
T  52252237 tactccctccgtcctaatttataagtaaaaaatattaattcatac---ttaagaaaactaacacttagtgatttgaagtataattttttgtgttcttctt 52252141  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  52252140 ggaataagtttcatg 52252126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 23514648 - 23514574
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||| |||| |||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||    
T  23514648 tatactccctccgtcttaatttataagcaaaaaaacattaattcacatttattaagaaaactaacacttattgat 23514574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 1335297 - 1335200
Alignment:
Q  118 tttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagtttcatg 206  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||||||||         || |||||||||||||| ||||||||||||||||||    
T  1335297 tttataagaaaaaaacattaattcacacttattaagaaaactaatacttagtgttttgagatattattttttgtgttctccttggaataagtttcatg 1335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 13541302 - 13541260
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13541302 gaatgcaatttgcatttaattttacattggaaaagatgatttg 13541260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 21654270 - 21654228
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21654270 gaatgcaatttgcatttaattttacattggaaaagatgatttg 21654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 36188920 - 36188982
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  36188920 tatactccctccatcccaatttataagcaaaaaacacaaattcacacttattaagaaatctaa 36188982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 37324179 - 37324221
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37324179 gaatgcaatttgcatttaattttacattggaaaagatgatttg 37324221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 55400763 - 55400721
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  55400763 gaatgcaatttgcatttaattttacattggaaaagatgatttg 55400721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 43576147 - 43576090
Alignment:
Q  115 taatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||  |||||||||||||||| |||||||||||||| ||||||||||||||    
T  43576147 taatttataactaaaaaacactaattcatacttattaagaaaattaacacttagtgat 43576090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 51255390 - 51255322
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt 169  Q
    |||||| | ||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| ||||    
T  51255390 tactccttccgtcctaatttataagcaaaaaatattaattcatatttattaagaaaactaacacgtagt 51255322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 28793346 - 28793295
Alignment:
Q  121 ataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  28793346 ataagtaaaaaataataattcacacttattaagaaaactaacacttagtgat 28793295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 1335135 - 1335093
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1335135 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 1335093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 31126237 - 31126195
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  31126237 gaatgcaatttgcatttaattttacattggaaaaaatgatttg 31126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 49068076 - 49068034
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  49068076 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 49068034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 53020208 - 53020166
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  53020208 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 53020166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 46820073 - 46820032
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  46820073 aatgcaacttgcatttaattttacattggaaaagatgatttg 46820032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 23513592 - 23513550
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  23513592 gaatgcaatttgcatttaattttacattgaaaaagatgttttg 23513550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 26641207 - 26641249
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  26641207 gaatgcaatttgcatttaattttaccttgaaaaagatgatttg 26641249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 45782371 - 45782321
Alignment:
Q  112 tcctaatttataagcaaaaaacactaattcacacttattaagaaaactaac 162  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  45782371 tcctaatttataagcaaaaaacactaatttacatttattaaaaaaattaac 45782321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 46580561 - 46580519
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  46580561 gaatgcaatttgcatttaattttacattgtaaaatatgatttg 46580519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 51309618 - 51309504
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagt---------gataattttttgtgttcttct 190  Q
    |||||| | ||||| ||||||||||||||||| ||| |||||||| ||||||||||||  || || ||||          ||||||||||||||||||||    
T  51309618 tactccttccgtcccaatttataagcaaaaaaacacaaattcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttct 51309519  T
Q  191 tggaataagtttcat 205  Q
    |||||||||||||||    
T  51309518 tggaataagtttcat 51309504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 51426644 - 51426602
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  51426644 gaatgtaatttgcatttaattttacattagaaaagatgatttg 51426602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 36189101 - 36189142
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  36189101 gaatgcaatttgcatttaattttactttggaaaagaagattt 36189142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 43575981 - 43575940
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  43575981 aatgcaacttgcatttaattttacattagaaaagatgatttg 43575940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 45781421 - 45781380
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  45781421 aatgcaacttgaatttaattttacattggaaaagatgatttg 45781380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 46296173 - 46296214
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  46296173 aatgcaacttgcatttaattttacatcggaaaagatgatttg 46296214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 51255210 - 51255169
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  51255210 aatgcaacttgcatttaattttagattggaaaagatgatttg 51255169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 52172106 - 52172147
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  52172106 aatgcaacttgcatttaattttacattgaaaaagatgatttg 52172147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 52252052 - 52252019
Alignment:
Q  280 ttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||    
T  52252052 ttgcatttaattttacattggaaaagatgatttg 52252019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 2927503 - 2927441
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||| |||||||| ||||||||||||||    || ||||| ||||||||||||||||    
T  2927503 tatactccctccgtcctaaattataagcaaaaaaacaaaaatcacatttattaagaaaactaa 2927441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 37042328 - 37042390
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  37042328 tatactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 37042390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 313
Target Start/End: Original strand, 16739263 - 16739292
Alignment:
Q  284 atttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||    
T  16739263 atttaattttacattggaaaagatgatttg 16739292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 9e-35; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 23873783 - 23873898
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  23873783 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 23873882  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  23873883 tggaataagtttcatg 23873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 46949525 - 46949410
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||| ||    
T  46949525 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 46949426  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  46949425 tggaataagtttcatg 46949410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 49924623 - 49924508
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||    
T  49924623 atactccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttct 49924524  T
Q  191 tggaataagtttcatg 206  Q
    || |||||||||||||    
T  49924523 tgaaataagtttcatg 49924508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 26907048 - 26907162
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||         ||||||||||||||||| |||    
T  26907048 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctcctt 26907147  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  26907148 ggaataagtttcatg 26907162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 28916473 - 28916586
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||    
T  28916473 tactccctccgccctaatttataag-aaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttctt 28916571  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  28916572 ggaataagtttcatg 28916586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 25990954 - 25990837
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||         |||||||||||||||||     
T  25990954 atatactccctccgtcctaatttataagcaaaaaacattaaatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 25990855  T
Q  189 cttggaataagtttcatg 206  Q
    ||||||||||||||||||    
T  25990854 cttggaataagtttcatg 25990837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 40935568 - 40935684
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         || |||||||||||||| |    
T  40935568 tatactccctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcc 40935667  T
Q  190 ttggaataagtttcatg 206  Q
    |||||||||||||||||    
T  40935668 ttggaataagtttcatg 40935684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 40960430 - 40960545
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         || |||||||||||||| ||    
T  40960430 atactccttccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctcct 40960529  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  40960530 tggaataagtttcatg 40960545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 18036747 - 18036633
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| ||         |||||||||||||||||||||    
T  18036747 tactccctccgtcctaatttataagtaaaaaacattaattcatacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttcttctt 18036648  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  18036647 ggaataagtttcatg 18036633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 39026199 - 39026317
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttct 187  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||         |||||||||||||||||    
T  39026199 atatactccctccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttct 39026298  T
Q  188 tcttggaataagtttcatg 206  Q
    ||||| |||||||||||||    
T  39026299 tcttgaaataagtttcatg 39026317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 18852429 - 18852312
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||         |||||||||||||||||     
T  18852429 atatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaagctaacagttagtgatttgaggtataattttttgtgttctc 18852330  T
Q  189 cttggaataagtttcatg 206  Q
    |||| |||||||||||||    
T  18852329 cttgaaataagtttcatg 18852312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 28017861 - 28017788
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28017861 tatactccctctgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgat 28017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 29488953 - 29488837
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||         ||||||| ||||||||| |    
T  29488953 tatactccctccgtcctaatttataagtcaaaaacactaattcacacttattaagaaaacgaacacttagtgatttgaggtataatttgttgtgttctcc 29488854  T
Q  190 ttggaataagtttcatg 206  Q
    |||||||||||||||||    
T  29488853 ttggaataagtttcatg 29488837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 18913301 - 18913416
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||| ||    
T  18913301 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 18913400  T
Q  191 tggaataagtttcatg 206  Q
     |||||||||||||||    
T  18913401 cggaataagtttcatg 18913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 43655993 - 43656108
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  43655993 atactccatccgtcctaatttaaaagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 43656092  T
Q  191 tggaataagtttcatg 206  Q
    || |||||||||||||    
T  43656093 tgaaataagtttcatg 43656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 44875382 - 44875311
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44875382 tactctctccgtcctaatttataagcaaaaaacactaattcacacttactaagaaaactaacacttagtgat 44875311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 35942035 - 35941978
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacactta 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35942035 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacactta 35941978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 40220262 - 40220194
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt 169  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  40220262 tactccctccgtcctaatttacaagcaaaaaacagtaattcacacttattaagaaaactaacacttagt 40220194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 31970266 - 31970380
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||| | ||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||         || |||||||||||||| |||    
T  31970266 tactccttccgtcctaatttataagcaaaaaatactaattcacacttattaagaagattaacacttagtgatttgaggtatgattttttgtgttctcctt 31970365  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  31970366 ggaataagtttcatg 31970380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 38942395 - 38942512
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    |||||| ||| ||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||         |||||||||||||||||     
T  38942395 tatacttcctccgttctattttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 38942494  T
Q  189 cttggaataagtttcatg 206  Q
    ||||||||||||||||||    
T  38942495 cttggaataagtttcatg 38942512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 15311381 - 15311266
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||         |||||||||||| |||| ||    
T  15311381 atacttcctccgtcataatttataagcataaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctcct 15311282  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  15311281 tggaataagtttcatg 15311266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 36037443 - 36037380
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  36037443 atatactccctccgtcccaatttataagcaaaaaacacaaattcacacttattaagaaaactaa 36037380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 15286005 - 15285892
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||| | ||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  15286005 tactccatccgttctaatttataag-aaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctcctt 15285907  T
Q  192 ggaataagtttcatg 206  Q
    | |||||||||||||    
T  15285906 gaaataagtttcatg 15285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 35189396 - 35189290
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaag-aaaactaacacttagt---------gataattttttgtgttcttcttggaataag 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||          |||||||||| ||||||||||| ||||||    
T  35189396 cgtcctaatttataagcaaaaaacactaattcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttcttcttgaaataag 35189297  T
Q  200 tttcatg 206  Q
    |||||||    
T  35189296 tttcatg 35189290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 4529380 - 4529308
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| | ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  4529380 tatactccatccgttctaatttataag-aaaaaacactaattcatacttattaagaaaactaacacttagtgat 4529308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 45357829 - 45357905
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacac--taattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||| ||||| ||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||    
T  45357829 atataatccctccgtcctaatttataagcaaaaaaaacattaattcacacttattaagacaactaacacttagtgat 45357905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 9128246 - 9128175
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||| | |||||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||    
T  9128246 tactccatccgtcctaatttataagtaaaaaatattaattcacacttattaagaaaattaacacttagtgat 9128175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 47997140 - 47997086
Alignment:
Q  118 tttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  47997140 tttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgat 47997086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 6848264 - 6848337
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||| ||||||| |||||||| | ||||||||    
T  6848264 atatactccctccatcctaatttataagaaaaaaacactaattcacatttattaa-aaaactaataattagtgat 6848337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 25990772 - 25990730
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25990772 gaatgcaatttgcatttaattttacattggaaaagatgatttg 25990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 26479945 - 26479871
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||| ||| ||| ||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||    
T  26479945 tatacttcctccgttctaatttataagcaaaaaaacaataattcacacttattaaaaaaactaacatttagtgat 26479871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 28017682 - 28017640
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28017682 gaatgcaatttgcatttaattttacattggaaaagatgatttg 28017640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 43656173 - 43656215
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43656173 gaatgcaatttgcatttaattttacattggaaaagatgatttg 43656215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 44875203 - 44875161
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44875203 gaatgcaatttgcatttaattttacattggaaaagatgatttg 44875161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 23873964 - 23874005
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23873964 aatgcaatttgcatttaattttacattggaaaagatgatttg 23874005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 6848442 - 6848484
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6848442 gaatgcaatttgcatttaattttagattggaaaagatgatttg 6848484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 15285828 - 15285786
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  15285828 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 15285786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 18036568 - 18036526
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  18036568 gaatgcaatttgcatttaattttactttggaaaagatgatttg 18036526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 28916651 - 28916693
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  28916651 gaatgcaatttgcatttaattttatattggaaaagatgatttg 28916693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 4529211 - 4529170
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  4529211 gaatgcaatttgcatttaattttacattggaaaaaatgattt 4529170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 18913483 - 18913524
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  18913483 aatgcaacttgcatttaattttacattggaaaagatgatttg 18913524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 31970446 - 31970487
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  31970446 aatgcaacttgcatttaattttacattggaaaagatgatttg 31970487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 40935750 - 40935791
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  40935750 aatgcaacttgcatttaattttacattggaaaagatgatttg 40935791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 36384132 - 36384076
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaa 156  Q
    ||||||||| ||||| ||||||||||||||||| || | ||||||||||||||||||    
T  36384132 atactccctccgtcccaatttataagcaaaaaatacaatttcacacttattaagaaa 36384076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 40220080 - 40220044
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagat 307  Q
    |||||||||||||||||||||||||||||||||||||    
T  40220080 gaatgcaatttgcatttaattttacattggaaaagat 40220044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 9128067 - 9128025
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  9128067 gaatgcaatttacatttaattttacattgaaaaagatgatttg 9128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 18852247 - 18852205
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  18852247 gaatgcaatttgcatttaattttacattggaaaaaataatttg 18852205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 26479763 - 26479721
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  26479763 gaatgcaattttcattgaattttacattggaaaagatgatttg 26479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 26907225 - 26907267
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  26907225 gaatgcaatttgcatttaattttacattgaaaaagataatttg 26907267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 35941865 - 35941823
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||| |||||||||||||||| |||||||||||||    
T  35941865 gaatgcaatttgtatttaattttacattgaaaaagatgatttg 35941823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 38942577 - 38942619
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  38942577 gaatgcaacttgcatttaattttacattggaaaaaatgatttg 38942619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 46949345 - 46949303
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  46949345 gaatacaatttgcatttaattttacattgaaaaagatgatttg 46949303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 47996978 - 47996936
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||| ||||||| ||||||||||||||||||||||||||||||    
T  47996978 gaatacaatttgtatttaattttacattggaaaagatgatttg 47996936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 24728579 - 24728640
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||| |||||||| ||||||||||||||    || ||||||||||||||||||||||    
T  24728579 atactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 24728640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 40960611 - 40960652
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  40960611 aatgcaacttgcatttaattttacattgaaaaagatgatttg 40960652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 49924434 - 49924401
Alignment:
Q  280 ttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||    
T  49924434 ttgcatttaattttacattggaaaagatgatttg 49924401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 39026383 - 39026423
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  39026383 aatgcaacttgcatttaattttacattggaaaatatgattt 39026423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 24190678 - 24190616
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||| ||||| || ||||||| ||||||||  ||| |||||||||||||||||||||    
T  24190678 atatactccctccgtcccaaattataagaaaaaaacaaaaat-cacacttattaagaaaactaa 24190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 40220180 - 40220145
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||||||||| ||||||||||||||||||    
T  40220180 ataattttttgtgttctccttggaataagtttcatg 40220145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 29488772 - 29488730
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| ||||||||||||||||||||||||| || |||||    
T  29488772 gaatgcaacttgcatttaattttacattggaaaatattatttg 29488730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 36383952 - 36383912
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  36383952 gaatgcaatttgcatttaattttactttgg-aaagatgattt 36383912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 313
Target Start/End: Original strand, 45358025 - 45358054
Alignment:
Q  284 atttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||    
T  45358025 atttaattttacattggaaaagatgatttg 45358054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 44148790 - 44148850
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| |||||||| ||||||||||||||    || |||||||||||| |||||||||    
T  44148790 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattacgaaaactaa 44148850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 4e-34; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 30766649 - 30766535
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  30766649 tactcccttcgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcctt 30766550  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  30766549 ggaataagtttcatg 30766535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 10228116 - 10228044
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10228116 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 10228044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 17721762 - 17721877
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||         ||||||||||||||||| ||    
T  17721762 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 17721861  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  17721862 tggaataagtttcatg 17721877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 5121410 - 5121481
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5121410 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgat 5121481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 12278909 - 12278795
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    ||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  12278909 tactcacttcgtcttaatttataagcaaaaaacatcaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 12278810  T
Q  192 ggaataagtttcatg 206  Q
     ||||||||||||||    
T  12278809 agaataagtttcatg 12278795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 374302 - 374188
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt---------gataattttttgtgttcttctt 191  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||          ||||||||||||||||| |||    
T  374302 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctcctt 374203  T
Q  192 ggaataagtttcatg 206  Q
     ||||||||||||||    
T  374202 agaataagtttcatg 374188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 30949339 - 30949224
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||         ||||||||||||||||| ||    
T  30949339 atactccctccatcctaatttataagcaaaaaatactaattcacacttattaacaaaactaacatttattgatttgaggtataattttttgtgttctcct 30949240  T
Q  191 tggaataagtttcatg 206  Q
    || |||||||||||||    
T  30949239 tgaaataagtttcatg 30949224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 17599516 - 17599464
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaa 152  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  17599516 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaa 17599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 31887074 - 31887146
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| ||| ||||||||||||||||||| || ||||| ||||||||||| |||||||||||| ||||||    
T  31887074 tactccctccgttctaatttataagcaaaaaaacattaatttacacttattaataaaactaacactcagtgat 31887146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 10227936 - 10227894
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  10227936 gaatgcaatttgcatttaattttatattggaaaagatgatttg 10227894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 17598317 - 17598275
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  17598317 gaatgcaatttgcatttaattttacattggaaaagaagatttg 17598275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 17721942 - 17721983
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  17721942 gaatgcaatttgcatttaattttacattggaaaatatgattt 17721983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 30949158 - 30949117
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  30949158 aatgcaacttgcatttaattttacattggaaaagatgatttg 30949117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 31887255 - 31887296
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  31887255 aatgcaacttgcatttaattttacattggaaaagatgatttg 31887296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 374123 - 374081
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  374123 gaatgcaatttgcatttaattttacatcggaaaatatgatttg 374081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 12278730 - 12278688
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  12278730 gaatgcaatttgcatttaattttacatttgaaaaaatgatttg 12278688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 33756280 - 33756238
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  33756280 gaatgcaatttgcatttaattttacattgaaaaaaatgatttg 33756238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 7274828 - 7274889
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||| |||||||| ||||||||||||||    || ||||||||||||||||||||||    
T  7274828 atactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 7274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 21542628 - 21542565
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  21542628 atatactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 21542565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 32882660 - 32882702
Alignment:
Q  116 aatttataagcaaaaaacactaattcacacttattaagaaaac 158  Q
    |||||||||||||||||  | ||||||||||||||||||||||    
T  32882660 aatttataagcaaaaaattcaaattcacacttattaagaaaac 32882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 32882826 - 32882864
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatga 309  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  32882826 gaatgcgatttgcatttaattttactttggaaaagatga 32882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 30766469 - 30766437
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaa 304  Q
    |||||||||||||||||||||||||||| ||||    
T  30766469 aatgcaatttgcatttaattttacattgaaaaa 30766437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 100 - 205
Target Start/End: Original strand, 29180331 - 29180445
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  29180331 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 29180430  T
Q  191 tggaataagtttcat 205  Q
    |||||||||||||||    
T  29180431 tggaataagtttcat 29180445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 30776403 - 30776518
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  30776403 atactccctccgtcctaatttataagcaaaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 30776502  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  30776503 tggaataagtttcatg 30776518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 39969909 - 39970023
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  39969909 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 39970008  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  39970009 ggaataagtttcatg 39970023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 10591422 - 10591537
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||         ||||||||||||||||| ||    
T  10591422 atactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 10591521  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  10591522 tggaataagtttcatg 10591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 38187644 - 38187719
Alignment:
Q  97 catatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38187644 catatactccctccgtcctaatttataagctaaaaacactaattcacacttattaagaaaactaacacttagtgat 38187719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 50768645 - 50768531
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||| | |||    
T  50768645 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttcctt 50768546  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  50768545 ggaataagtttcatg 50768531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 9797995 - 9798066
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  9797995 tactcccttcgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacatttagtgat 9798066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 43980701 - 43980627
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43980701 atatattccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgat 43980627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 49902226 - 49902156
Alignment:
Q  102 actcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49902226 actccattcgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 49902156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 3043086 - 3043157
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtga 171  Q
    |||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3043086 atactctctccgtcctaatttataagtaaaaaacactaattcacacttattaagaaaactaacacttagtga 3043157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 30777688 - 30777573
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||| ||    
T  30777688 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctcct 30777589  T
Q  191 tggaataagtttcatg 206  Q
    || |||||||||||||    
T  30777588 tgaaataagtttcatg 30777573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 37788640 - 37788537
Alignment:
Q  112 tcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagttt 202  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||||||||||||||    
T  37788640 tcctaatttataagcaaaaaatattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttt 37788541  T
Q  203 catg 206  Q
    ||||    
T  37788540 catg 37788537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 29899915 - 29899805
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||         ||||||||||||||||| |||    
T  29899915 tactccctccgtcctaatttataagtaaaaaacactaattcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctcctt 29899816  T
Q  192 ggaataagttt 202  Q
    |||||||||||    
T  29899815 ggaataagttt 29899805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 53677403 - 53677512
Alignment:
Q  105 cccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaa 195  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||| |||||||    
T  53677403 ccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaa 53677502  T
Q  196 taagtttcat 205  Q
    | ||||||||    
T  53677503 tgagtttcat 53677512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 28681860 - 28681788
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  28681860 atactctctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacatttagtgat 28681788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 55937627 - 55937694
Alignment:
Q  105 cccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  55937627 ccctccgtcctaatttataagtaaaaaacactaattcatacttattaagaaaactaacacttagtgat 55937694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 51495350 - 51495278
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||    
T  51495350 tatactccctccgtcctaatttataag-aaaaaacactaattcacagttattaagaaaattaacacttaatgat 51495278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 47807385 - 47807281
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagt 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||  |||||||         |||||||||||||||||  |||||||||||    
T  47807385 cgtcctaatttataagcaaaaa-cactaattcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaataagt 47807287  T
Q  201 ttcatg 206  Q
    ||||||    
T  47807286 ttcatg 47807281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 3043266 - 3043308
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3043266 gaatgcaatttgcatttaattttacattggaaaagatgatttg 3043308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 10591602 - 10591644
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10591602 gaatgcaatttgcatttaattttacattggaaaagatgatttg 10591644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 38940890 - 38940848
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38940890 gaatgcaatttgcatttaattttacattggaaaagatgatttg 38940848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 38941038 - 38940956
Alignment:
Q  132 acactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagtttcat 205  Q
    |||||||||||||||||||||||||||||||||||| ||         ||||||||||||||||| |||||||||||||||||    
T  38941038 acactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcat 38940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 39970088 - 39970130
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39970088 gaatgcaatttgcatttaattttacattggaaaagatgatttg 39970130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 43980519 - 43980477
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43980519 gaatgcaatttgcatttaattttacattggaaaagatgatttg 43980477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 51495170 - 51495128
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51495170 gaatgcaatttgcatttaattttacattggaaaagatgatttg 51495128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 53677578 - 53677620
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  53677578 gaatgcaatttgcatttaattttacattggaaaagatgatttg 53677620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 32012261 - 32012318
Alignment:
Q  116 aatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  32012261 aatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttaatgat 32012318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 47807216 - 47807175
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47807216 gaatgcaatttgcatttaattttacattggaaaagatgattt 47807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 52713083 - 52713042
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52713083 aatgcaatttgcatttaattttacattggaaaagatgatttg 52713042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 9798174 - 9798216
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  9798174 gaatccaatttgcatttaattttacattggaaaagatgatttg 9798216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 32012426 - 32012468
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  32012426 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 32012468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 38187825 - 38187867
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  38187825 gaatgcaacttgcatttaattttacattggaaaagatgatttg 38187867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 49902048 - 49902006
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  49902048 gaatgcaatttgcatttaattttatattggaaaagatgatttg 49902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 51495429 - 51495372
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaa 157  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||    
T  51495429 tatactccctccgtcctaatttataag-aaaaaatattaattcacacttattaagaaaa 51495372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 27750448 - 27750489
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  27750448 aatgcaacttgcatttaattttacattggaaaagatgatttg 27750489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 29180511 - 29180552
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  29180511 gaatgcaatttgcatttaattttacattggaaaagataattt 29180552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 29899735 - 29899694
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  29899735 aatgcaacttgcatttaattttacattggaaaagatgatttg 29899694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 30776583 - 30776624
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  30776583 gaatgcaatttgcatttaattttacattggaaaagataattt 30776624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 30777508 - 30777467
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  30777508 gaatgcaatttgcatttaattttacattggaaaagataattt 30777467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 37788471 - 37788430
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  37788471 aatgcaagttgcatttaattttacattggaaaagatgatttg 37788430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 50768465 - 50768424
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  50768465 aatgcaacttgcatttaattttacattggaaaagatgatttg 50768424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 1620050 - 1620008
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  1620050 gaatgcaaattgcatttaattttacattgaaaaagatgatttg 1620008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 5222212 - 5222326
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaa-ttcacacttattaagaaaactaacacttagtgat---------aattttttgtgttcttct 190  Q
    |||||||| ||||  |||||||||||||||||   ||| ||||||||||||||||||||||| || |||| ||         ||||||||||||||||||    
T  5222212 tactccctccgtctcaatttataagcaaaaaaatataaattcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttct 5222311  T
Q  191 tggaataagtttcat 205  Q
    || ||||||||||||    
T  5222312 tgaaataagtttcat 5222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 1620231 - 1620158
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||  || ||||||||||| ||||||| ||||||||||||||||||||| ||  ||| ||||||||||    
T  1620231 atactccctcggttctaatttataaacaaaaaaacactaattcacacttattaaggaagttaatacttagtgat 1620158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 48793576 - 48793637
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||| |||||||| ||||||| |||||||   || ||||||||||||||||||||||    
T  48793576 atactccctccgtcctaaattataagaaaaaaaccaaaaatcacacttattaagaaaactaa 48793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 55937811 - 55937844
Alignment:
Q  280 ttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||    
T  55937811 ttgcatttaattttacattggaaaagatgatttg 55937844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 5222393 - 5222433
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  5222393 aatgcaatttgcatttaattttactttggaaaaaatgattt 5222433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 47868084 - 47868024
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| |||||||| ||||||||||||||    || ||||||||||||||||||||||    
T  47868084 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 47868024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 52713176 - 52713141
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||||||| ||||||||||||||||||||    
T  52713176 ataattttttgtgtttttcttggaataagtttcatg 52713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 17236295 - 17236329
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcat 205  Q
    |||||||||||||||||||||| ||||||||||||    
T  17236295 ataattttttgtgttcttcttgaaataagtttcat 17236329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 39078363 - 39078301
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||| ||||| || ||||||| |||||| |  || ||||||||||||||||||||||    
T  39078363 tatactccctccgtcccaaattataagaaaaaaaaaaaaaatcacacttattaagaaaactaa 39078301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 30012051 - 30012091
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  30012051 gaatgcaatttgcatttaattttactttgg-aaagatgattt 30012091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 40553795 - 40553754
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  40553795 gaatgcaatttgcatttaatttctctttggaaaagatgattt 40553754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 2229452 - 2229392
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  2229452 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 2229392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 43107816 - 43107931
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||| ||    
T  43107816 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 43107915  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  43107916 tggaataagtttcatg 43107931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 18206231 - 18206345
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         ||||||||||||||||| |||    
T  18206231 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcctt 18206330  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  18206331 ggaataagtttcatg 18206345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 35181394 - 35181280
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||||| |||    
T  35181394 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcctt 35181295  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  35181294 ggaataagtttcatg 35181280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 19932967 - 19933081
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         || |||||||||||||| |||    
T  19932967 tactctctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcctt 19933066  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  19933067 ggaataagtttcatg 19933081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 21654030 - 21654147
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttctt 188  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         || ||||||||||||||     
T  21654030 atatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgacttgagatatcattttttgtgttctc 21654129  T
Q  189 cttggaataagtttcatg 206  Q
    ||||||||||||||||||    
T  21654130 cttggaataagtttcatg 21654147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 3157638 - 3157567
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3157638 tactccctccgtcctaatttataagcaaaaaacactaattcatacttattaagaaaactaacacttagtgat 3157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 23106656 - 23106584
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23106656 atactccctccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgat 23106584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 41889373 - 41889302
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41889373 tactccctccgttctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgat 41889302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 42617874 - 42617759
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||         ||||||||||||||||| ||    
T  42617874 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctcct 42617775  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  42617774 tggaataagtttcatg 42617759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 47383609 - 47383537
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  47383609 atactccctccgtcctaatttataagcaaaaaacacaaattcacacatattaagaaaactaacacttaatgat 47383537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 22111250 - 22111313
Alignment:
Q  110 cgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22111250 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgat 22111313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 40583339 - 40583276
Alignment:
Q  110 cgtcctaatttataagcaaaa-aacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40583339 cgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgat 40583276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 9818671 - 9818599
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  9818671 atactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgat 9818599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 10720596 - 10720524
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  10720596 atactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgat 10720524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 32491030 - 32491090
Alignment:
Q  112 tcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  32491030 tcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttggtgat 32491090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 41815603 - 41815715
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttc 189  Q
    |||||||| || || ||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||         ||||||||||||||||| |    
T  41815603 tatactccatttgttctaatttataagcaaaaaataataattgacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 41815702  T
Q  190 ttggaataagttt 202  Q
    |||||||||||||    
T  41815703 ttggaataagttt 41815715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 40560585 - 40560518
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacactta 167  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  40560585 atactccctccgtcctaatttataagcaaaaaacattaatttacacttattaaaaaaactaacactta 40560518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 48879590 - 48879519
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  48879590 tactccatccgttctaatttataagcaaaaaacactaatttacacttattaagaaaactaacacttaatgat 48879519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 44600649 - 44600536
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||| ||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |         ||||||||||||||||| ||    
T  44600649 atacttcctccgttctaatttataagcaaaaaatactaattcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctcct 44600550  T
Q  191 tggaataagtttca 204  Q
    | ||||||||||||    
T  44600549 tagaataagtttca 44600536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 7989219 - 7989334
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    |||||||| ||| ||| |||||||| |||||| || |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  7989219 tactccctccgttctattttataagtaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 7989318  T
Q  191 tggaataagtttcatg 206  Q
    |||||||| |||||||    
T  7989319 tggaataaatttcatg 7989334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 29235980 - 29236037
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaa 157  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  29235980 atactccctccgtcctaatttataagcaaaaaacacaaattcacactcattaagaaaa 29236037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 41890165 - 41890269
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagt 200  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||         ||||||||||||||||| |||| |||||||    
T  41890165 cgtcctaatttataag-aaaaaacactaattcaaacttattaagaaaactaacatttaatgatttggggtataattttttgtgttctccttgaaataagt 41890263  T
Q  201 ttcatg 206  Q
    ||||||    
T  41890264 ttcatg 41890269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 48937805 - 48937911
Alignment:
Q  104 tcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg--------ataattttttgtgttcttcttggaa 195  Q
    ||||| |||| |||||||||| |||||||||| |||||| |||||||||||||||  ||||||||||        ||||||||||||||||| |||||||    
T  48937805 tccctccgtcttaatttataaacaaaaaacacaaattcatacttattaagaaaacatacacttagtggttgaggtataattttttgtgttctccttggaa 48937904  T
Q  196 taagttt 202  Q
    |||||||    
T  48937905 taagttt 48937911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 23106476 - 23106434
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23106476 gaatgcaatttgcatttaattttacattggaaaagatgatttg 23106434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 23731761 - 23731648
Alignment:
Q  104 tcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaac--taacacttagtg---------ataattttttgtgttcttcttg 192  Q
    ||||| |||||||||||||||  ||||||| |||||||||| |||||||||||||  ||||||||||||         || |||||||||||||| ||||    
T  23731761 tccctccgtcctaatttataaaaaaaaaacgctaattcacatttattaagaaaactataacacttagtgatttgatgtatgattttttgtgttctccttg 23731662  T
Q  193 gaataagtttcatg 206  Q
    ||||||||||||||    
T  23731661 gaataagtttcatg 23731648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 43107996 - 43108038
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43107996 gaatgcaatttgcatttaattttacattggaaaagatgatttg 43108038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 45598927 - 45598885
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  45598927 gaatgcaatttgcatttaattttacattggaaaagatgatttg 45598885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 45599109 - 45599036
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacac--taattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||| | ||||||||||||||| ||||||| ||  |||||| ||||||||||||||||||||||||||||||    
T  45599109 tactccttccgtcctaatttataaacaaaaaaaacagtaattcgcacttattaagaaaactaacacttagtgat 45599036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 35084009 - 35084126
Alignment:
Q  98 atatactcccttcgtcctaatttataagc-aaaaaacactaattcacacttattaagaaaactaacac---------ttagtgataattttttgtgttct 187  Q
    ||||||||||| ||||| ||||||||||| ||||||||| |||||||||||| |||||||||||| ||         | ||| ||| |||||||||||||    
T  35084009 atatactccctccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttct 35084108  T
Q  188 tcttggaataagtttcat 205  Q
    ||||| ||||||||||||    
T  35084109 tcttgaaataagtttcat 35084126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 40594021 - 40593964
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaa 157  Q
    ||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||    
T  40594021 atactccctccgtcctaatttataagcaaaaaatacaaattcacatttattaagaaaa 40593964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 3157459 - 3157417
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  3157459 gaatgcaacttgcatttaattttacattggaaaagatgatttg 3157417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 35181215 - 35181173
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  35181215 gaatgcaatttgcatttaattttacattgaaaaagatgatttg 35181173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 47383429 - 47383387
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  47383429 gaatgcaatttacatttaattttacattggaaaagatgatttg 47383387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 48937980 - 48938022
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  48937980 gaatgcaatttgtatttaattttacattggaaaagatgatttg 48938022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 48943006 - 48943048
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  48943006 gaatgcaatttgtatttaattttacattggaaaagatgatttg 48943048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 19933147 - 19933188
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  19933147 aatgcaacttgcatttaattttacattggaaaagatgatttg 19933188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 19964286 - 19964327
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  19964286 aatgcaacttgcatttaattttacattggaaaagatgatttg 19964327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 23731582 - 23731541
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  23731582 aatgcaacttgcatttaattttacattggaaaagatgatttg 23731541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 30082376 - 30082335
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  30082376 gaatgcaatttgcatttaattttactttggaaaagatgattt 30082335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 36576441 - 36576400
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  36576441 gaatgcaacttgcatttaattttacattggaaaagatgattt 36576400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 40560404 - 40560363
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  40560404 aatgcaacttgcatttaattttacattggaaaagatgatttg 40560363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 48879411 - 48879370
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  48879411 gaatgcaatttgcatttaattttacattgaaaaagatgattt 48879370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 18800688 - 18800735
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaa 157  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  18800688 cgtcccaatttataagcaaaaaatacaaattcacacttattaagaaaa 18800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 30082543 - 30082496
Alignment:
Q  111 gtcctaatttataagcaaaaaacactaattcacacttattaagaaaac 158  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||||    
T  30082543 gtcccaatttataggcaaaaaacacaaattcacacttattaagaaaac 30082496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 21654212 - 21654254
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  21654212 gaatgtaatttgcatttaattttacattggaaaaggtgatttg 21654254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 22111421 - 22111463
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  22111421 gaatgcaatttgcatttaattttacattgaaaaatatgatttg 22111463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 34808242 - 34808200
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  34808242 gaatgcaatttgcatttaattttacgttgaaaaagatgatttg 34808200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 40583168 - 40583126
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  40583168 gaatgcaatttgcatttaattttacattgaaaaatatgatttg 40583126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 41889194 - 41889152
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  41889194 gaatgcaatttgctttgaattttacattggaaaagatgatttg 41889152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 32491199 - 32491240
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  32491199 aatgcaacttgcatttaattttacattcgaaaagatgatttg 32491240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 34808384 - 34808307
Alignment:
Q  138 attcacacttattaagaaaactaacacttagtgat---------aattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||| |||||||||||| ||||||||||         ||||||||||||||||||||||| ||||||||||    
T  34808384 attcacacttagtaagaaaactaatacttagtgatttgaggtataattttttgtgttcttcttggaaaaagtttcatg 34808307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 44600469 - 44600428
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  44600469 gaatgcaacttgcatttaattttacactggaaaagatgattt 44600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 35084193 - 35084233
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  35084193 aatgcaatttgcatttaattttactttggaaaggatgattt 35084233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 313
Target Start/End: Complemental strand, 9818491 - 9818460
Alignment:
Q  282 gcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||    
T  9818491 gcatttaattttacattggaaaagatgatttg 9818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 313
Target Start/End: Complemental strand, 10720416 - 10720385
Alignment:
Q  282 gcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||    
T  10720416 gcatttaattttacattggaaaagatgatttg 10720385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 18102740 - 18102677
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||||||  |||| || |||||||||||||| |  || ||||||||||||||||||||||    
T  18102740 atatactccctctgtcccaaattataagcaaaaaaaaaaaaatcacacttattaagaaaactaa 18102677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 25737577 - 25737640
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  25737577 atatactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 25737640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 36576585 - 36576548
Alignment:
Q  134 actaattcacacttattaagaaaactaacacttagtgat 172  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  36576585 actaattcacacttat-aagaaaactaacacttagtgat 36576548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 41890333 - 41890375
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||| ||||||||||||||||||||||  |||||||||||||    
T  41890333 gaatgtaatttgcatttaattttacattaaaaaagatgatttg 41890375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 42617694 - 42617652
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  42617694 gaatgcaatttgcatttaattttacattgaaaaaaataatttg 42617652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 18206419 - 18206452
Alignment:
Q  280 ttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||| |||||||||||||    
T  18206419 ttgcatttaattttacattgaaaaagatgatttg 18206452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 18800865 - 18800906
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||    
T  18800865 gaatgcaatttacatttaattttactttgaaaaagatgattt 18800906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 19964151 - 19964220
Alignment:
Q  146 ttattaagaaaactaacacttagtgata---------attttttgtgttcttcttggaataagtttcatg 206  Q
    |||||||||||||||||||||||||||          |||||||||||||| ||||||||||||||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatg 19964220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 304
Target Start/End: Complemental strand, 28608396 - 28608363
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaa 304  Q
    ||||||||||||||||||||||||| ||||||||    
T  28608396 gaatgcaatttgcatttaattttactttggaaaa 28608363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 33153062 - 33153021
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||    
T  33153062 gaatgcaatttgcatttaattttactttgaaaaagataattt 33153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 39337553 - 39337512
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||||||||||||| |||||  ||||||||||||||||    
T  39337553 gaatgcaatttgcatttagttttaatttggaaaagatgattt 39337512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 41815784 - 41815825
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    |||||||| || |||||||||||||||||||||| |||||||    
T  41815784 gaatgcaacttacatttaattttacattggaaaatatgattt 41815825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 14806076 - 14806016
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  14806076 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 14806016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 15253070 - 15253010
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  15253070 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 15253010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 28941284 - 28941320
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatg 308  Q
    ||||||||||||||||||||| || ||||||||||||    
T  28941284 aatgcaatttgcatttaatttcactttggaaaagatg 28941320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 39348812 - 39348776
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagat 307  Q
    |||| |||||||||||||||||||| |||||||||||    
T  39348812 gaatacaatttgcatttaattttactttggaaaagat 39348776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 46760210 - 46760270
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    |||||||| ||||| || ||||||||||||||    || ||||||||||||||||||||||    
T  46760210 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 46760270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 9e-32; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 31316755 - 31316869
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||| |||    
T  31316755 tactccctccgtcctaatttataagcaaaaaacactaattcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 31316854  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  31316855 ggaataagtttcatg 31316869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 25962401 - 25962516
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  25962401 atactccctccgtcctaatttataagcaaaaaagaataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 25962500  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  25962501 tggaataagtttcatg 25962516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 35462670 - 35462744
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35462670 atatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgat 35462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 8541521 - 8541629
Alignment:
Q  104 tcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttgga 194  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||| |||||||||||    
T  8541521 tccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattcttcttgga 8541620  T
Q  195 ataagtttc 203  Q
    |||||||||    
T  8541621 ataagtttc 8541629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 20915065 - 20914950
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    |||||||||  || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  20915065 atactccctctgtgctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttaagatataattttttgtgttctcct 20914966  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  20914965 tggaataagtttcatg 20914950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 8145967 - 8146081
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||         ||||||||||||||||| |||    
T  8145967 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctcctt 8146066  T
Q  192 ggaataagtttcatg 206  Q
    | |||||||||||||    
T  8146067 gaaataagtttcatg 8146081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 16286037 - 16286151
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttctt 191  Q
    |||| ||| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||         |||||||||||||||||  ||    
T  16286037 tacttcctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcttt 16286136  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  16286137 ggaataagtttcatg 16286151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 42365240 - 42365126
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat---------aattttttgtgttcttctt 191  Q
    |||||||| ||| |||||||||||| |||||||||||||||| | |||||||||||||||| ||||||||||         |||||||||||||||| ||    
T  42365240 tactccctccgttctaatttataagtaaaaaacactaattcatatttattaagaaaactaatacttagtgatttgaggtacaattttttgtgttcttatt 42365141  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  42365140 ggaataagtttcatg 42365126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 24432353 - 24432468
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||| ||| |||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  24432353 atacttcctccgtcttaatttataataaaaaaagattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 24432452  T
Q  191 tggaataagtttcatg 206  Q
    ||||||||||||||||    
T  24432453 tggaataagtttcatg 24432468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 31690573 - 31690684
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 190  Q
    ||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||         ||||||||||||||||||||    
T  31690573 atactccttccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttct 31690672  T
Q  191 tggaataagttt 202  Q
    |||||| |||||    
T  31690673 tggaatgagttt 31690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 12639093 - 12639026
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt 169  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  12639093 tacttcctccgtcctaatttataag-aaaaaacactaattcacacttattaagaaaactaacatttagt 12639026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 13146935 - 13146863
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||| | ||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  13146935 atactccatccgttctaatttataagcaaaaaatactaattcatacttattatgaaaactaacacttagtgat 13146863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 30086497 - 30086569
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaa-cactaattcacacttattaagaaaactaacacttagt 169  Q
    ||||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  30086497 atatactccctccgttctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacatttagt 30086569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 36413890 - 36414004
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagt---------gataattttttgtgttcttctt 191  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| || || ||||          ||||||||||||||| || ||    
T  36413890 tactccctccgtcctaatttataaacaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtttttatt 36413989  T
Q  192 ggaataagtttcatg 206  Q
    |||||||||||||||    
T  36413990 ggaataagtttcatg 36414004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 8146146 - 8146188
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8146146 gaatgcaatttgcatttaattttacattggaaaagatgatttg 8146188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 31690753 - 31690795
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31690753 gaatgcaatttgcatttaattttacattggaaaagatgatttg 31690795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 42365061 - 42365019
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42365061 gaatgcaatttgcatttaattttacattggaaaagatgatttg 42365019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 8541698 - 8541739
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8541698 aatgcaatttgcatttaattttacattggaaaagatgatttg 8541739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 13146755 - 13146713
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  13146755 gaatgcaatttacatttaattttacattggaaaagatgatttg 13146713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 25841073 - 25841011
Alignment:
Q  99 tatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||||||||||| ||||||||||||||    || ||||||||||||||||||||||    
T  25841073 tatactcccttcgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 25841011  T

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Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 30086681 - 30086723
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  30086681 gaatgcaatttgtatttaattttacattggaaaagatgatttg 30086723  T

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Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 37066206 - 37066288
Alignment:
Q  130 aaacactaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttcttggaataagtttc 203  Q
    ||||| |||||||||||||||||||||||||||||||| ||         |||||||||||| ||||||||||||||||||||    
T  37066206 aaacagtaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattcttcttggaataagtttc 37066288  T

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Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 37066356 - 37066398
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  37066356 gaatgcaatttgcatttaattttacattggaaaagattatttg 37066398  T

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Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 20914884 - 20914843
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  20914884 aatgcaacttgcatttaattttacattggaaaagatgatttg 20914843  T

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Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 2002098 - 2002146
Alignment:
Q  110 cgtcctaatttataagcaaaaaacactaattcacacttattaagaaaac 158  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  2002098 cgtcccaatttataagaaaaaaacacaaattcacacttattaagaaaac 2002146  T

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Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 24432534 - 24432574
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  24432534 aatgcaacttgcatttaattttacattggaaaagatgattt 24432574  T

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Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 24439778 - 24439726
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaa 152  Q
    |||||| || |||||||||||||||||||||||||| | ||||||||||||||    
T  24439778 atactcactccgtcctaatttataagcaaaaaacacaatttcacacttattaa 24439726  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 2002266 - 2002307
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  2002266 gaatgcaatttgcatttaattttattttggaaaagatgattt 2002307  T

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Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 31316935 - 31316976
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  31316935 aatgcaacttgcatttaattttacattgaaaaagatgatttg 31316976  T

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Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 42273855 - 42273794
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||| ||||| || |||||||||||||| |  || ||||||||||||||||||||||    
T  42273855 atatactccctccgtcccaaattataagcaaaaaaaa--aaatcacacttattaagaaaactaa 42273794  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 12792738 - 12792800
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaa 161  Q
    ||||||||||| |||||||| |||||||||||||| |  || ||||||||||||| ||||||||    
T  12792738 atatactccctccgtcctaaattataagcaaaaaa-aaaaaatcacacttattaaaaaaactaa 12792800  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 24439698 - 24439663
Alignment:
Q  171 ataattttttgtgttcttcttggaataagtttcatg 206  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24439698 ataattttttgtgttattcttggaataagtttcatg 24439663  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 12638915 - 12638873
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  12638915 gaatgcaatttgcatttaattttacattgaaaaaaataatttg 12638873  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 17825331 - 17825373
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||    
T  17825331 gaatgtaatttgcatttaattttacattgaaaaatatgatttg 17825373  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 35462851 - 35462893
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||    
T  35462851 gaatgaaatttgcatttaattttacattgaaaaagatgttttg 35462893  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 16286217 - 16286258
Alignment:
Q  272 aatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    ||||||| |||||||||||||||||||| ||||||| |||||    
T  16286217 aatgcaacttgcatttaattttacattgaaaaagataatttg 16286258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 24439598 - 24439558
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgattt 312  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  24439598 gaatgcaatttgcatttaattttactttgg-aaagatgattt 24439558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 25962594 - 25962627
Alignment:
Q  280 ttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||| |||||||||||||    
T  25962594 ttgcatttaattttacattgaaaaagatgatttg 25962627  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 20644225 - 20644161
Alignment:
Q  98 atatactcccttcgtcctaatttataagcaaaaaacactaat-tcacacttattaagaaaactaa 161  Q
    ||||||||||| ||||| || |||||||||||||| |  ||  ||||||||||||||||||||||    
T  20644225 atatactccctccgtcccaaattataagcaaaaaaaaaaaaaatcacacttattaagaaaactaa 20644161  T

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Target: scaffold0495 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 4834 - 4762
Alignment:
Q  100 atactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4834 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgat 4762  T

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Target: scaffold0495; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 4654 - 4613
Alignment:
Q  271 gaatgcaatttgcatttaattttacattggaaaagatgatttg 313  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  4654 gaatgcaatttgcatttaattttatattgg-aaagatgatttg 4613  T

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Target: scaffold0300 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 527 - 587
Alignment:
Q  101 tactcccttcgtcctaatttataagcaaaaaacactaat-tcacacttattaagaaaactaa 161  Q
    |||||||| |||||||| |||||||||||||| || ||| ||||||||||||||||||||||    
T  527 tactccctccgtcctaaattataagcaaaaaa-acaaatatcacacttattaagaaaactaa 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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