View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18157_low_45 (Length: 246)

Name: NF18157_low_45
Description: NF18157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18157_low_45
NF18157_low_45
[»] chr2 (45 HSPs)
chr2 (1-229)||(19319953-19320181)
chr2 (17-131)||(19643337-19643451)
chr2 (17-131)||(15668229-15668344)
chr2 (1-96)||(22524516-22524611)
chr2 (17-133)||(14792666-14792784)
chr2 (29-131)||(24158219-24158321)
chr2 (29-131)||(41121352-41121456)
chr2 (35-131)||(23183984-23184083)
chr2 (35-131)||(23595241-23595340)
chr2 (30-132)||(24844470-24844573)
chr2 (36-96)||(33705698-33705758)
chr2 (36-96)||(9015007-9015069)
chr2 (41-96)||(26816307-26816362)
chr2 (36-96)||(28711352-28711414)
chr2 (29-96)||(24850305-24850374)
chr2 (59-125)||(27639880-27639946)
chr2 (13-96)||(34321541-34321626)
chr2 (25-131)||(24302551-24302658)
chr2 (8-96)||(24440396-24440485)
chr2 (36-133)||(31800483-31800583)
chr2 (36-133)||(38631353-38631453)
chr2 (35-94)||(20569864-20569924)
chr2 (35-131)||(22683778-22683874)
chr2 (29-73)||(27639965-27640009)
chr2 (70-125)||(18703213-18703267)
chr2 (70-133)||(19115565-19115627)
chr2 (36-96)||(21536888-21536950)
chr2 (16-94)||(21846480-21846559)
chr2 (35-131)||(22272532-22272630)
chr2 (36-96)||(22318011-22318073)
chr2 (46-132)||(25196322-25196409)
chr2 (36-131)||(25829503-25829601)
chr2 (36-96)||(28700851-28700913)
chr2 (36-96)||(40782870-40782932)
chr2 (36-96)||(45086774-45086836)
chr2 (29-96)||(17966788-17966857)
chr2 (36-131)||(18430536-18430632)
chr2 (25-96)||(31967688-31967761)
chr2 (25-96)||(44840813-44840886)
chr2 (29-96)||(44881547-44881616)
chr2 (29-94)||(21910768-21910833)
chr2 (38-96)||(22187758-22187818)
chr2 (30-96)||(25189746-25189814)
chr2 (35-92)||(33241015-33241072)
chr2 (35-92)||(33248936-33248993)
[»] chr3 (75 HSPs)
chr3 (17-131)||(11514177-11514291)
chr3 (17-125)||(17761796-17761904)
chr3 (17-125)||(19063116-19063224)
chr3 (35-132)||(13932301-13932399)
chr3 (17-131)||(19705757-19705871)
chr3 (33-131)||(12409560-12409658)
chr3 (30-131)||(14007985-14008086)
chr3 (17-131)||(15648087-15648201)
chr3 (30-131)||(2902909-2903010)
chr3 (18-131)||(27851900-27852013)
chr3 (17-131)||(10852152-10852267)
chr3 (35-126)||(13654311-13654402)
chr3 (56-131)||(15552445-15552520)
chr3 (35-96)||(7920488-7920549)
chr3 (30-131)||(13699699-13699800)
chr3 (29-131)||(20725495-20725599)
chr3 (47-125)||(50722127-50722205)
chr3 (47-125)||(50790644-50790722)
chr3 (13-131)||(3087860-3087980)
chr3 (38-131)||(21317706-21317799)
chr3 (36-96)||(1470115-1470175)
chr3 (29-132)||(14077034-14077138)
chr3 (29-131)||(4242855-4242958)
chr3 (29-96)||(20418574-20418641)
chr3 (29-131)||(7494666-7494768)
chr3 (36-131)||(16032884-16032981)
chr3 (37-131)||(6713473-6713568)
chr3 (35-96)||(17768749-17768810)
chr3 (35-96)||(19070050-19070111)
chr3 (17-131)||(19249065-19249181)
chr3 (14-96)||(33583644-33583728)
chr3 (14-96)||(33598264-33598348)
chr3 (36-96)||(41495378-41495439)
chr3 (14-135)||(16199460-16199583)
chr3 (30-126)||(16304869-16304965)
chr3 (36-131)||(19197519-19197614)
chr3 (36-132)||(49553144-49553243)
chr3 (36-131)||(50300621-50300715)
chr3 (37-96)||(19225795-19225854)
chr3 (36-96)||(24775192-24775254)
chr3 (36-131)||(52920809-52920907)
chr3 (25-96)||(5216382-5216455)
chr3 (36-131)||(12968750-12968846)
chr3 (46-131)||(14131589-14131675)
chr3 (29-96)||(26417378-26417447)
chr3 (25-96)||(29855819-29855892)
chr3 (25-96)||(46796078-46796151)
chr3 (29-125)||(8728682-8728779)
chr3 (29-125)||(9080569-9080666)
chr3 (36-135)||(14392659-14392761)
chr3 (70-131)||(16793980-16794041)
chr3 (37-131)||(17697971-17698066)
chr3 (36-132)||(31303793-31303892)
chr3 (36-132)||(38177345-38177444)
chr3 (17-96)||(5797925-5798004)
chr3 (38-125)||(7477910-7477997)
chr3 (36-96)||(11223950-11224012)
chr3 (36-96)||(11869489-11869551)
chr3 (17-96)||(19643223-19643302)
chr3 (36-96)||(20627173-20627235)
chr3 (36-96)||(20646558-20646620)
chr3 (36-96)||(28582511-28582573)
chr3 (36-96)||(49666089-49666151)
chr3 (29-96)||(54284691-54284758)
chr3 (25-96)||(1727717-1727790)
chr3 (56-125)||(6252530-6252599)
chr3 (70-99)||(10626536-10626565)
chr3 (70-99)||(10654876-10654905)
chr3 (29-131)||(12397513-12397616)
chr3 (14-96)||(12962794-12962878)
chr3 (38-96)||(16658335-16658395)
chr3 (70-126)||(16882731-16882788)
chr3 (36-96)||(37467706-37467767)
chr3 (22-96)||(46349521-46349597)
chr3 (43-96)||(15903611-15903666)
[»] scaffold0758 (1 HSPs)
scaffold0758 (17-131)||(4630-4744)
[»] chr5 (37 HSPs)
chr5 (35-131)||(20237076-20237172)
chr5 (13-123)||(18672388-18672498)
chr5 (39-126)||(27275889-27275976)
chr5 (1-95)||(26118330-26118424)
chr5 (29-131)||(23590123-23590227)
chr5 (36-133)||(17815368-17815468)
chr5 (35-131)||(20969590-20969686)
chr5 (29-131)||(34638861-34638964)
chr5 (38-96)||(12079220-12079278)
chr5 (29-96)||(12352510-12352579)
chr5 (46-94)||(25460009-25460057)
chr5 (29-132)||(26784734-26784840)
chr5 (13-96)||(10849147-10849232)
chr5 (17-131)||(31588682-31588796)
chr5 (49-131)||(39798582-39798664)
chr5 (29-94)||(26119513-26119578)
chr5 (22-96)||(29138082-29138158)
chr5 (25-133)||(4887396-4887507)
chr5 (46-125)||(19749881-19749961)
chr5 (67-131)||(24547911-24547975)
chr5 (4-131)||(26251441-26251571)
chr5 (37-96)||(89127-89188)
chr5 (36-95)||(6499623-6499684)
chr5 (36-95)||(6512140-6512201)
chr5 (25-96)||(9089303-9089376)
chr5 (25-96)||(21660613-21660686)
chr5 (29-96)||(25096495-25096564)
chr5 (29-96)||(25154465-25154534)
chr5 (25-96)||(31118249-31118322)
chr5 (25-96)||(35931685-35931758)
chr5 (29-132)||(2152576-2152681)
chr5 (36-94)||(7745339-7745399)
chr5 (36-96)||(14086229-14086290)
chr5 (70-99)||(27203524-27203553)
chr5 (35-96)||(9398435-9398498)
chr5 (38-94)||(18513836-18513892)
chr5 (29-134)||(22403751-22403857)
[»] scaffold0683 (1 HSPs)
scaffold0683 (11-133)||(715-837)
[»] chr8 (44 HSPs)
chr8 (13-131)||(23192261-23192379)
chr8 (18-119)||(19505141-19505242)
chr8 (17-96)||(24635726-24635805)
chr8 (13-131)||(22710958-22711076)
chr8 (1-96)||(17689689-17689784)
chr8 (35-131)||(12194273-12194369)
chr8 (35-131)||(12438701-12438797)
chr8 (17-125)||(27740205-27740312)
chr8 (17-122)||(1208353-1208458)
chr8 (38-94)||(13581590-13581646)
chr8 (36-96)||(17267868-17267930)
chr8 (39-94)||(17937691-17937746)
chr8 (36-131)||(17914856-17914953)
chr8 (30-96)||(23772762-23772830)
chr8 (14-131)||(29693692-29693812)
chr8 (36-96)||(13430326-13430388)
chr8 (36-96)||(17525422-17525484)
chr8 (36-131)||(18719363-18719458)
chr8 (33-133)||(19707902-19708004)
chr8 (28-96)||(19927435-19927505)
chr8 (41-96)||(24497840-24497895)
chr8 (25-96)||(3598021-3598094)
chr8 (25-96)||(9320973-9321046)
chr8 (25-96)||(14989149-14989222)
chr8 (29-96)||(33083254-33083323)
chr8 (70-132)||(43645221-43645283)
chr8 (25-96)||(45538147-45538220)
chr8 (29-131)||(18773023-18773126)
chr8 (36-96)||(19156579-19156640)
chr8 (29-131)||(22461282-22461385)
chr8 (25-96)||(22663538-22663610)
chr8 (25-96)||(22674185-22674257)
chr8 (36-96)||(1238066-1238128)
chr8 (36-96)||(18120816-18120878)
chr8 (36-96)||(18680195-18680257)
chr8 (29-133)||(26833446-26833551)
chr8 (25-96)||(6408105-6408178)
chr8 (29-96)||(18722324-18722393)
chr8 (25-96)||(21288784-21288857)
chr8 (25-96)||(43640179-43640252)
chr8 (70-135)||(19956000-19956065)
chr8 (70-131)||(23352745-23352805)
chr8 (38-96)||(24646736-24646796)
chr8 (29-96)||(20255261-20255329)
[»] chr4 (44 HSPs)
chr4 (29-131)||(14356777-14356879)
chr4 (20-131)||(20577615-20577726)
chr4 (17-131)||(17812014-17812127)
chr4 (35-131)||(2652138-2652234)
chr4 (1-94)||(23087991-23088084)
chr4 (29-132)||(12417222-12417325)
chr4 (17-125)||(21350237-21350345)
chr4 (29-132)||(10250222-10250326)
chr4 (17-135)||(17526091-17526209)
chr4 (30-96)||(19809906-19809972)
chr4 (1-95)||(24619904-24619998)
chr4 (22-131)||(11901607-11901717)
chr4 (29-132)||(17787647-17787751)
chr4 (30-96)||(19818898-19818964)
chr4 (25-96)||(29121761-29121834)
chr4 (25-96)||(54680284-54680357)
chr4 (36-96)||(14833791-14833853)
chr4 (29-131)||(19888751-19888854)
chr4 (25-96)||(3793477-3793550)
chr4 (29-95)||(10328078-10328144)
chr4 (36-133)||(10693252-10693352)
chr4 (36-133)||(10907018-10907118)
chr4 (39-96)||(13306688-13306745)
chr4 (29-86)||(14902149-14902206)
chr4 (29-131)||(17540816-17540919)
chr4 (59-96)||(32465718-32465755)
chr4 (40-96)||(37985446-37985503)
chr4 (15-131)||(18776351-18776467)
chr4 (35-96)||(22089932-22089995)
chr4 (36-96)||(3498031-3498093)
chr4 (36-96)||(13575796-13575858)
chr4 (30-96)||(16324168-16324235)
chr4 (38-96)||(2940729-2940787)
chr4 (25-96)||(6517877-6517950)
chr4 (25-96)||(17398329-17398402)
chr4 (25-96)||(19885078-19885151)
chr4 (70-132)||(41114362-41114424)
chr4 (35-96)||(8677229-8677289)
chr4 (36-94)||(9141260-9141320)
chr4 (29-131)||(10660797-10660900)
chr4 (29-131)||(10874942-10875045)
chr4 (23-96)||(17247645-17247720)
chr4 (36-96)||(33378833-33378896)
chr4 (70-98)||(55651971-55651999)
[»] scaffold0522 (2 HSPs)
scaffold0522 (26-131)||(3875-3980)
scaffold0522 (29-131)||(11158-11260)
[»] scaffold0074 (1 HSPs)
scaffold0074 (30-131)||(32014-32115)
[»] chr7 (66 HSPs)
chr7 (14-133)||(5035688-5035807)
chr7 (37-126)||(11571965-11572054)
chr7 (17-95)||(15304932-15305010)
chr7 (13-126)||(16307197-16307311)
chr7 (13-131)||(18047575-18047693)
chr7 (29-97)||(9065835-9065903)
chr7 (29-131)||(14304045-14304147)
chr7 (17-131)||(18361302-18361417)
chr7 (17-96)||(24810875-24810954)
chr7 (17-131)||(23126270-23126383)
chr7 (29-125)||(1877933-1878027)
chr7 (29-96)||(9763042-9763109)
chr7 (29-96)||(9803534-9803601)
chr7 (14-132)||(16412399-16412518)
chr7 (30-96)||(3778260-3778326)
chr7 (1-94)||(9396619-9396710)
chr7 (1-131)||(14114398-14114528)
chr7 (1-131)||(14424048-14424178)
chr7 (30-96)||(20598604-20598670)
chr7 (29-131)||(7487539-7487642)
chr7 (14-96)||(12174019-12174103)
chr7 (13-96)||(4550018-4550101)
chr7 (1-92)||(12222175-12222266)
chr7 (36-96)||(12366445-12366507)
chr7 (17-96)||(16813254-16813333)
chr7 (29-131)||(16307397-16307499)
chr7 (30-119)||(9063854-9063943)
chr7 (8-133)||(9097897-9098023)
chr7 (11-96)||(15088866-15088952)
chr7 (36-96)||(2913316-2913378)
chr7 (36-131)||(5000513-5000611)
chr7 (36-96)||(9069974-9070036)
chr7 (36-133)||(10882831-10882930)
chr7 (35-131)||(13172064-13172162)
chr7 (36-96)||(33691421-33691483)
chr7 (29-96)||(4494867-4494936)
chr7 (25-96)||(5826357-5826430)
chr7 (2-96)||(11016321-11016415)
chr7 (25-96)||(14426903-14426976)
chr7 (17-87)||(16422890-16422960)
chr7 (25-96)||(30944053-30944126)
chr7 (25-96)||(30945086-30945159)
chr7 (36-133)||(13692741-13692841)
chr7 (36-133)||(13730367-13730467)
chr7 (36-125)||(16316241-16316333)
chr7 (35-96)||(39284306-39284369)
chr7 (70-133)||(41841963-41842027)
chr7 (36-132)||(44467451-44467550)
chr7 (36-96)||(9709529-9709591)
chr7 (36-96)||(13137619-13137681)
chr7 (36-96)||(13260319-13260381)
chr7 (36-133)||(13303222-13303321)
chr7 (29-96)||(19417579-19417646)
chr7 (36-96)||(22577715-22577777)
chr7 (36-96)||(28409435-28409497)
chr7 (36-96)||(30026292-30026354)
chr7 (25-96)||(48236632-48236703)
chr7 (29-132)||(13880990-13881095)
chr7 (25-96)||(19236709-19236782)
chr7 (25-96)||(32264418-32264491)
chr7 (67-96)||(5686095-5686124)
chr7 (67-96)||(5738892-5738921)
chr7 (35-96)||(15870818-15870879)
chr7 (35-96)||(2265226-2265289)
chr7 (36-96)||(11086700-11086763)
chr7 (36-89)||(48062530-48062585)
[»] chr6 (45 HSPs)
chr6 (2-96)||(14758649-14758743)
chr6 (29-131)||(24399049-24399151)
chr6 (35-131)||(15477486-15477581)
chr6 (37-133)||(25596061-25596157)
chr6 (17-131)||(15552308-15552422)
chr6 (32-131)||(19473206-19473307)
chr6 (17-126)||(20462642-20462751)
chr6 (35-96)||(31719405-31719466)
chr6 (36-96)||(15542284-15542344)
chr6 (17-132)||(12715081-12715198)
chr6 (30-131)||(25592927-25593029)
chr6 (17-131)||(26186064-26186178)
chr6 (29-131)||(31127031-31127133)
chr6 (17-96)||(12394831-12394910)
chr6 (29-131)||(10704237-10704339)
chr6 (70-132)||(12348565-12348626)
chr6 (17-131)||(20462273-20462387)
chr6 (29-131)||(23005692-23005797)
chr6 (29-131)||(23782569-23782674)
chr6 (36-133)||(19086555-19086655)
chr6 (35-126)||(24718411-24718504)
chr6 (17-96)||(16742586-16742665)
chr6 (70-133)||(19626266-19626328)
chr6 (36-96)||(22802529-22802591)
chr6 (46-129)||(23231557-23231640)
chr6 (29-131)||(13145468-13145570)
chr6 (25-96)||(15955081-15955154)
chr6 (29-96)||(15987592-15987661)
chr6 (35-131)||(24728205-24728303)
chr6 (36-96)||(13602560-13602621)
chr6 (35-96)||(17868155-17868216)
chr6 (35-96)||(17877938-17877999)
chr6 (36-96)||(3680880-3680942)
chr6 (36-96)||(9718248-9718310)
chr6 (46-122)||(23298361-23298438)
chr6 (17-136)||(26971851-26971973)
chr6 (36-131)||(17928208-17928304)
chr6 (70-131)||(7812443-7812504)
chr6 (70-126)||(18171675-18171732)
chr6 (38-96)||(21235503-21235563)
chr6 (29-131)||(26943949-26944053)
chr6 (70-98)||(9933260-9933288)
chr6 (35-96)||(16528927-16528990)
chr6 (46-94)||(27989147-27989195)
chr6 (39-96)||(34451366-34451425)
[»] chr1 (48 HSPs)
chr1 (35-131)||(16478347-16478443)
chr1 (20-133)||(31359649-31359763)
chr1 (35-131)||(2818940-2819036)
chr1 (14-96)||(2327021-2327105)
chr1 (17-126)||(21682815-21682927)
chr1 (12-131)||(18896162-18896281)
chr1 (35-126)||(1090127-1090218)
chr1 (17-133)||(18129613-18129729)
chr1 (29-96)||(21617048-21617115)
chr1 (17-96)||(35896452-35896531)
chr1 (29-96)||(12613410-12613479)
chr1 (35-131)||(16870357-16870455)
chr1 (30-96)||(24227598-24227666)
chr1 (36-131)||(48704604-48704701)
chr1 (36-131)||(2268932-2269030)
chr1 (17-84)||(19227806-19227873)
chr1 (29-96)||(26701759-26701828)
chr1 (70-131)||(20909871-20909931)
chr1 (36-133)||(22201410-22201510)
chr1 (61-94)||(23918120-23918153)
chr1 (36-96)||(28492050-28492111)
chr1 (29-96)||(18615313-18615381)
chr1 (36-96)||(25399739-25399799)
chr1 (36-97)||(36134578-36134641)
chr1 (36-96)||(10757808-10757870)
chr1 (36-96)||(16234925-16234987)
chr1 (36-96)||(22154278-22154340)
chr1 (36-96)||(22464406-22464468)
chr1 (36-96)||(23036131-23036193)
chr1 (36-96)||(25447984-25448046)
chr1 (36-96)||(30893466-30893528)
chr1 (36-96)||(38282987-38283049)
chr1 (29-96)||(1578230-1578299)
chr1 (25-96)||(2835083-2835156)
chr1 (35-96)||(9659078-9659142)
chr1 (70-124)||(17024602-17024656)
chr1 (61-131)||(18516773-18516843)
chr1 (36-95)||(19717909-19717970)
chr1 (25-96)||(21134779-21134852)
chr1 (40-126)||(26279643-26279729)
chr1 (25-96)||(29216176-29216249)
chr1 (35-94)||(33255968-33256029)
chr1 (35-94)||(33276140-33276201)
chr1 (25-96)||(46089374-46089447)
chr1 (29-131)||(21191454-21191558)
chr1 (22-96)||(21984963-21985039)
chr1 (61-125)||(9347653-9347717)
chr1 (1-96)||(10154459-10154552)
[»] scaffold0498 (1 HSPs)
scaffold0498 (17-131)||(2962-3076)
[»] scaffold0490 (1 HSPs)
scaffold0490 (29-131)||(7724-7826)
[»] scaffold0388 (2 HSPs)
scaffold0388 (17-131)||(5736-5850)
scaffold0388 (26-123)||(4813-4911)
[»] scaffold0092 (1 HSPs)
scaffold0092 (35-131)||(8440-8536)
[»] scaffold0772 (1 HSPs)
scaffold0772 (30-132)||(500-602)
[»] scaffold0011 (1 HSPs)
scaffold0011 (36-131)||(59938-60034)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-132)||(1111-1230)
scaffold0003 (17-87)||(11602-11672)
[»] scaffold0002 (2 HSPs)
scaffold0002 (29-131)||(116186-116288)
scaffold0002 (30-131)||(112579-112680)
[»] scaffold0364 (1 HSPs)
scaffold0364 (35-131)||(10025-10122)
[»] scaffold0351 (1 HSPs)
scaffold0351 (30-131)||(8912-9013)
[»] scaffold0916 (1 HSPs)
scaffold0916 (30-131)||(2248-2350)
[»] scaffold0035 (3 HSPs)
scaffold0035 (14-131)||(30201-30319)
scaffold0035 (36-96)||(19118-19180)
scaffold0035 (26-96)||(98819-98891)
[»] scaffold0043 (2 HSPs)
scaffold0043 (36-95)||(1557-1616)
scaffold0043 (29-95)||(25351-25417)
[»] scaffold1782 (2 HSPs)
scaffold1782 (29-132)||(739-844)
scaffold1782 (36-96)||(669-731)
[»] scaffold1050 (1 HSPs)
scaffold1050 (29-131)||(1314-1416)
[»] scaffold0217 (2 HSPs)
scaffold0217 (17-131)||(19420-19537)
scaffold0217 (13-96)||(9946-10031)
[»] scaffold0037 (1 HSPs)
scaffold0037 (35-126)||(87300-87393)
[»] scaffold0622 (2 HSPs)
scaffold0622 (13-96)||(3035-3119)
scaffold0622 (70-131)||(1511-1572)
[»] scaffold0004 (3 HSPs)
scaffold0004 (29-131)||(220633-220737)
scaffold0004 (36-96)||(30516-30578)
scaffold0004 (70-131)||(243864-243925)
[»] scaffold0047 (2 HSPs)
scaffold0047 (36-96)||(30625-30687)
scaffold0047 (70-131)||(10315-10376)
[»] scaffold0005 (1 HSPs)
scaffold0005 (36-96)||(5846-5908)
[»] scaffold1359 (2 HSPs)
scaffold1359 (25-96)||(333-406)
scaffold1359 (25-96)||(1423-1496)
[»] scaffold0861 (1 HSPs)
scaffold0861 (29-96)||(4591-4660)
[»] scaffold0606 (1 HSPs)
scaffold0606 (35-96)||(5859-5918)
[»] scaffold0056 (2 HSPs)
scaffold0056 (25-96)||(25300-25373)
scaffold0056 (25-96)||(34454-34527)
[»] scaffold0009 (1 HSPs)
scaffold0009 (70-132)||(269168-269229)
[»] scaffold0411 (1 HSPs)
scaffold0411 (36-96)||(12615-12676)
[»] scaffold0040 (2 HSPs)
scaffold0040 (29-131)||(1110-1212)
scaffold0040 (40-126)||(3645-3731)
[»] scaffold0026 (2 HSPs)
scaffold0026 (36-131)||(8301-8399)
scaffold0026 (23-96)||(115911-115986)
[»] scaffold0020 (1 HSPs)
scaffold0020 (29-131)||(145267-145370)
[»] scaffold0324 (1 HSPs)
scaffold0324 (36-132)||(10342-10441)
[»] scaffold1709 (1 HSPs)
scaffold1709 (36-96)||(4-66)
[»] scaffold1331 (1 HSPs)
scaffold1331 (36-96)||(255-317)
[»] scaffold0426 (1 HSPs)
scaffold0426 (36-96)||(14016-14078)
[»] scaffold0337 (1 HSPs)
scaffold0337 (36-96)||(15066-15128)
[»] scaffold0120 (2 HSPs)
scaffold0120 (36-96)||(36420-36482)
scaffold0120 (36-96)||(42523-42585)
[»] scaffold0018 (1 HSPs)
scaffold0018 (36-96)||(56862-56924)
[»] scaffold0439 (1 HSPs)
scaffold0439 (25-96)||(6352-6425)
[»] scaffold0275 (1 HSPs)
scaffold0275 (25-96)||(8669-8742)
[»] scaffold0022 (1 HSPs)
scaffold0022 (29-96)||(159470-159539)
[»] scaffold0747 (1 HSPs)
scaffold0747 (70-99)||(3391-3420)
[»] scaffold0359 (1 HSPs)
scaffold0359 (39-132)||(5298-5394)
[»] scaffold0201 (1 HSPs)
scaffold0201 (29-131)||(19446-19550)
[»] scaffold0081 (1 HSPs)
scaffold0081 (70-131)||(41091-41152)
[»] scaffold0607 (1 HSPs)
scaffold0607 (25-96)||(7310-7382)


Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 19320181 - 19319953
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaa 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19320181 ttttaaaacataaaatttttagtttatggtcctgcacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaa 19320082  T
Q  101 ctgacaatgttaaacacattttgttcgaacatactgaccaccaaatcattcacatccccatttcagagagcctcactgaataggaccacacatgaagaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19320081 ctgacaatgttaaacacattttgttcgaacatactgaccaccaaatcattcacatccccattttagagagcctcactgaataggaccacacatgaagaac 19319982  T
Q  201 gaacaaagtaaattctgtctggagtatac 229  Q
    |||||||||||||||||||||||||||||    
T  19319981 gaacaaagtaaattctgtctggagtatac 19319953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 19643451 - 19643337
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||||| |||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||| |||  |||| ||||| |||    
T  19643451 ttttagtatatggtcctgcacacttgaacaaatattagcatattcaattgaacttgtaataccttgttatcatcaaaactcaaaaagacattgttagaca 19643352  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  19643351 cattttgttccaaca 19643337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 15668344 - 15668229
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaatac-cttgttatcatcaaaactaaaactgacaatgttaaac 115  Q
    ||||||| ||| ||||| |||||||||| ||||||||  |||| ||||||||||||||||||  ||||||||||||||||| ||  ||  ||||||||||    
T  15668344 ttttagtctatggtcctgcacacttgaacaaatattagcatatccaattgaacttttaatacgtttgttatcatcaaaactcaatgtggtaatgttaaac 15668245  T
Q  116 acattttgttcgaaca 131  Q
    ||||||||||| ||||    
T  15668244 acattttgttccaaca 15668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22524611 - 22524516
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||| || |||||||||||  |||  |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||| |||||    
T  22524611 ttttaagacatataaattttagtttatgatcccgcacacttgaacaaatattaacatatccaattgaacttttagtaccttgttatcatctaaact 22524516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 14792784 - 14792666
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact--aaaactgacaatgttaaa 114  Q
    ||||||| ||||||| | | |||||||| ||||||||  ||||| |||||||||||||||| ||| ||||||||||||||  | |  |  ||||||||||    
T  14792784 ttttagtctatagtcatgctcacttgaataaatattaggatattgaattgaacttttaatatcttattatcatcaaaacttaatatatagcaatgttaaa 14792685  T
Q  115 cacattttgttcgaacata 133  Q
    |||||||||||| ||||||    
T  14792684 cacattttgttccaacata 14792666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 24158219 - 24158321
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||  |||| ||||| |  ||||||||||||||||||||||||||  ||  ||  ||||||||||||||||||||| |    
T  24158219 gtcctgcacacttgaacaaatattagcatatccaattaacattttaataccttgttatcatcaaaacctaaggtggtaatgttaaacacattttgttcca 24158318  T
Q  129 aca 131  Q
    |||    
T  24158319 aca 24158321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 41121456 - 41121352
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    |||||||||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||  ||  |  ||||||||||||||||| |||    
T  41121456 gtcctacacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctaaagggtaatgttaaacacattttattc 41121357  T
Q  127 gaaca 131  Q
     ||||    
T  41121356 caaca 41121352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 23184083 - 23183984
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| |||||||| ||||| |||||||  | |||||||||||||||||||||||||||   ||  || ||||||||||||||||||||| ||||    
T  23184083 cacacttgaacaaatattagtatatccaattgacaatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 23183984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 23595340 - 23595241
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| |||||||| ||||| |||||||  | |||||||||||||||||||||||||||   ||  || ||||||||||||||||||||| ||||    
T  23595340 cacacttgaacaaatattagtatatccaattgacaatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 23595241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 24844470 - 24844573
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    |||| |||||||||| ||||||||  |||| ||||||| | ||||||||| ||||||||||||||||| ||| || |  ||| ||||||||||||||| |    
T  24844470 tcctgcacacttgaacaaatattagcatatccaattgatatttttaatacattgttatcatcaaaacttaaagtggctttgtcaaacacattttgttcca 24844569  T
Q  129 acat 132  Q
    ||||    
T  24844570 acat 24844573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 33705758 - 33705698
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| || ||||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  33705758 acacttaaacaaatattagcatatctaattgaacttttaataccttgttatcatcaaaact 33705698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 9015069 - 9015007
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| |||| |||||||  | |||||||||||||||||||||||||||    
T  9015069 acacttgaacaaatattaacatatccaattgacaatttttaataccttgttatcatcaaaact 9015007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 26816307 - 26816362
Alignment:
Q  41 tgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||| ||||||||| ||||  |||||| ||||||||||||||||||||||||||||    
T  26816307 tgaacaaatattaacatatctaattgatcttttaataccttgttatcatcaaaact 26816362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 28711414 - 28711352
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  28711414 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 28711352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 24850374 - 24850305
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||| |||||||||    
T  24850374 gtcctgcacacttgaacaaatattagcatatccaattgacaacttttaataccttgttataatcaaaact 24850305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 27639946 - 27639880
Alignment:
Q  59 ttcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    |||||||||||||||||| |||| |||||||||||||| |||  | || |||||||| |||||||||    
T  27639946 ttcaattgaacttttaattccttattatcatcaaaactcaaagaggcattgttaaactcattttgtt 27639880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 34321626 - 34321541
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||| || |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  34321626 aaattttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 34321541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 24302658 - 24302551
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaactgacaatgttaaacacatttt 122  Q
    |||||| || |||||||||| ||||||||  |||| |||||||  ||||  ||||||||||||||||||||||| |||  |  | |||||||||||||||    
T  24302658 tatagttctgcacacttgaacaaatattagcatatccaattgacattttttaataccttgttatcatcaaaactcaaa-gggtattgttaaacacatttt 24302560  T
Q  123 gttcgaaca 131  Q
    |||| ||||    
T  24302559 gttccaaca 24302551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 24440485 - 24440396
Alignment:
Q  8 acataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||| || |||| || ||| ||||| | |||||||| ||||||||  |||||||||||| | ||||||||| |||||||||||||||||    
T  24440485 acatacaactttttgtctatggtcctgctcacttgaacaaatattagcatattcaattgacatttttaatacattgttatcatcaaaact 24440396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 31800583 - 31800483
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||| ||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  31800583 acacttgaacaaatattagcatattcaattgacaatttttaataccttattatcatcaaaactcttaagggttaatgttaaacacattttgttccaacat 31800484  T
Q  133 a 133  Q
    |    
T  31800483 a 31800483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 38631353 - 38631453
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| |||||||||  ||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  38631353 acacttgaacaaatattaacttatccaattgacaatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 38631452  T
Q  133 a 133  Q
    |    
T  38631453 a 38631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 20569864 - 20569924
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaa 94  Q
    |||||||||| |||| |||| |||| ||||||| | |||||||||||||||||||||||||    
T  20569864 cacacttgaacaaatgttaacatatccaattgatatttttaataccttgttatcatcaaaa 20569924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 22683778 - 22683874
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  ||||  |||||| |||||||||  ||||||| |||||| || | |  ||||||| |||||||||||||||| ||||    
T  22683778 cacacttgaacaaatattagcatatctaattgatcttttaatatattgttataatcaaatctcagagagacaatgataaacacattttgttccaaca 22683874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 27640009 - 27639965
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactttt 73  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||    
T  27640009 gtcctgcacacttgaacaaatattaacatattcaattgaactttt 27639965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 18703213 - 18703267
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    ||||||||||||||||||||||||||| |||  |  ||||||||||||||||||||    
T  18703213 ttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacattttgtt 18703267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 19115565 - 19115627
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacata 133  Q
    ||||||||| ||||||||||||||||| |||  |  ||||||||||||||||||||| ||||||    
T  19115565 ttttaatactttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttccaacata 19115627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 21536950 - 21536888
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  21536950 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 21536888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 21846480 - 21846559
Alignment:
Q  16 tttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaa 94  Q
    ||||| || ||| ||||| ||||| |||| ||||||||  |||| ||||||| | |||||||||||||||||||||||||    
T  21846480 ttttttgtctatggtcctgcacacctgaacaaatattagcatatccaattgacatttttaataccttgttatcatcaaaa 21846559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 22272532 - 22272630
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||| ||||  ||||||  | ||||||||| |||||||||||||||||  ||  |  ||||||||| ||||||||||| ||||    
T  22272532 cacacttgaacaaatattaacatatctaattgacaatttttaatacattgttatcatcaaaactctaaagggtaatgttaaatacattttgttccaaca 22272630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 22318011 - 22318073
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  22318011 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 22318073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 25196322 - 25196409
Alignment:
Q  46 aaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||  |||| ||||||| | ||||||||||||||||||||||||||| ||| ||  | | ||||||||||||| ||| |||||    
T  25196322 aaatattagcatatccaattgacatttttaataccttgttatcatcaaaactcaaagtggtattcttaaacacatttttttccaacat 25196409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 25829503 - 25829601
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa-ctaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | ||||||||||||||||||||||||| ||  ||  |  ||||||||||||||||||||| ||||    
T  25829503 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacacattttgttccaaca 25829601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 28700913 - 28700851
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  28700913 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 28700851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 40782870 - 40782932
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  40782870 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 40782932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 45086836 - 45086774
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||| ||||||||||||||    
T  45086836 acacttgaacaaatattagcatattcaattgacaatttttaataccttattatcatcaaaact 45086774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 17966857 - 17966788
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  17966857 gtcctatacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 17966788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 18430632 - 18430536
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||| |||||||||||||| |||  |  ||||||||||||||||| ||| ||||    
T  18430632 acacttgaacaaatattagcatatccaattgacaatttttaataccttattatcatcaaaactcaaa-agttaatgttaaacacattttattccaaca 18430536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 31967761 - 31967688
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  31967761 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 31967688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 44840813 - 44840886
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||| ||||||||   ||| |||||||  | ||||||||| |||||||||||||||||    
T  44840813 tatagtcctatacacttgaacaaatattagcgtatccaattgacaatttttaatactttgttatcatcaaaact 44840886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 44881547 - 44881616
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  44881547 gtcctgcacacttgaacaaatattagcatatccaattgataatttttaatacattgttatcatcaaaact 44881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 21910833 - 21910768
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    ||||| |||||||||| || |||||  |||||||||||   |||||||||||||||||||| ||||    
T  21910833 gtcctgcacacttgaacaagtattatcatattcaattgtcattttaataccttgttatcataaaaa 21910768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 22187818 - 22187758
Alignment:
Q  38 acttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  22187818 acttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 22187758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 25189746 - 25189814
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaact 96  Q
    |||| |||||||||| ||||||||  |||| |||||||  ||||  |||||||||||||||||||||||    
T  25189746 tcctgcacacttgaacaaatattagcatatccaattgacattttttaataccttgttatcatcaaaact 25189814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 33241015 - 33241072
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaa 92  Q
    |||| ||||| ||||||||  |||| ||||||| |||||||||| |||||||||||||    
T  33241015 cacatttgaacaaatattagcatatccaattgatcttttaatactttgttatcatcaa 33241072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 33248936 - 33248993
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaa 92  Q
    |||| ||||| ||||||||  |||| ||||||| |||||||||| |||||||||||||    
T  33248936 cacatttgaacaaatattagcatatccaattgatcttttaatactttgttatcatcaa 33248993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 11514177 - 11514291
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| || || |||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  11514177 ttttagtctatggttctgcacacttgaacaaatattagcatattcaattgaacttttaataccttgttatcatcaaaacttaaggtgacaatgttaaaca 11514276  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  11514277 cattttgttccaaca 11514291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 17761904 - 17761796
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||| |||||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||    
T  17761904 ttttagtctatggtcatacacacttgaacaaatattatcatatccaattgaacttttaataccttgttattatcaaaacttaaggtgacaatgttaaaca 17761805  T
Q  117 cattttgtt 125  Q
    |||| ||||    
T  17761804 cattctgtt 17761796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 19063224 - 19063116
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||| |||||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||    
T  19063224 ttttagtctatggtcatacacacttgaacaaatattatcatatccaattgaacttttaataccttgttattatcaaaacttaaggtgacaatgttaaaca 19063125  T
Q  117 cattttgtt 125  Q
    |||| ||||    
T  19063124 cattctgtt 19063116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 13932301 - 13932399
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttcgaacat 132  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||  |||||| || ||||||||||||||| |||||    
T  13932301 cacacttgaacaaatattaacatatccaattgaacttttaataccttgttatcatcaaaacttaaagatgacaaagtcaaacacattttgttccaacat 13932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 19705757 - 19705871
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||| | |||||||||| ||||||||  |||| |||||||||||||||||| ||||||||||||||||| ||  || ||||||||||||    
T  19705757 ttttagtctatggtcatgcacacttgaacaaatattagcatatccaattgaacttttaatactttgttatcatcaaaacttaaggtggcaatgttaaaca 19705856  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  19705857 cattttgttccaaca 19705871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 12409658 - 12409560
Alignment:
Q  33 tacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||| ||| ||||||||  |||| |||||||||||||||||||||||||||||||||||| |||   ||| ||||||||||||||||||| ||||    
T  12409658 tacacactagaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaactcaaagaaacattgttaaacacattttgttccaaca 12409560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 14007985 - 14008086
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    |||| |||||||||| |||||||| ||||| ||||||| | ||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||| |    
T  14007985 tcctgcacacttgaacaaatattagtatatccaattgacatttttaatactttgttatcatcaaaactaaaa-tggtaatgttaaacacattttgttcca 14008083  T
Q  129 aca 131  Q
    |||    
T  14008084 aca 14008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 15648087 - 15648201
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| |||  |||| ||||||| || ||||||||  |||| |||||||| |||||||||||||||||| |||||||| |||  || |||||||||||    
T  15648087 ttttagtctatgatcctgcacacttaaacaaatattagcatatccaattgaatttttaataccttgttatcgtcaaaacttaaagagataatgttaaaca 15648186  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  15648187 cattttgttccaaca 15648201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 2903010 - 2902909
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    |||| |||||||||| ||||||||  |||| ||||||||||||||||| |||||||||||||||||| |||  |||| |||||||  |||||||||| ||    
T  2903010 tcctccacacttgaacaaatattagcatatccaattgaacttttaatatcttgttatcatcaaaactcaaaaagacattgttaaatccattttgttccaa 2902911  T
Q  130 ca 131  Q
    ||    
T  2902910 ca 2902909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 27851900 - 27852013
Alignment:
Q  18 tttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacac 117  Q
    |||||| ||| ||||| || |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| | ||  ||  ||||||||| |     
T  27851900 tttagtctatggtcctgcatacttgaaaaaatattagtatatccaattgaacttttaatgccttgttatcatcaaaatttaaggtggtaatgttaaatag 27851999  T
Q  118 attttgttcgaaca 131  Q
    ||||||||| ||||    
T  27852000 attttgttccaaca 27852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 10852152 - 10852267
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaac 115  Q
    |||| |||||| ||||| |||||||||| ||||||||  |||| ||||||  | ||||||||||||||||||||||||||||||| ||  | ||| ||||    
T  10852152 tttttgtttatggtcctgcacacttgaacaaatattagcatatccaattggcatttttaataccttgttatcatcaaaactaaaagtggtattgtcaaac 10852251  T
Q  116 acattttgttcgaaca 131  Q
    ||||||||||| ||||    
T  10852252 acattttgttccaaca 10852267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 13654311 - 13654402
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||||| || ||||||||  |||| |||||||  ||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  13654311 cacacttcaacaaatattagcatatccaattgactttttaataccttgttatcatcaaaacttaaggtgataatgttaaacacattttgttc 13654402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 15552445 - 15552520
Alignment:
Q  56 atattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||| |||||||| |||||||||||||||||| |||||||| |||  |||||||||||||||||||||||| ||||    
T  15552445 atatccaattgaatttttaataccttgttatcgtcaaaacttaaagagacaatgttaaacacattttgttccaaca 15552520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 7920549 - 7920488
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  7920549 cacacttgaacaagtattagtatatccaattgaacttttaataccttgttatcatcaaaact 7920488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 13699699 - 13699800
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    |||| |||||||||| ||||||||  |||| |||||||  |||||||| |||||||||||||||||| ||  ||  ||||||||||||||||||||| ||    
T  13699699 tccttcacacttgaacaaatattagcatatccaattgactttttaatatcttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaa 13699798  T
Q  130 ca 131  Q
    ||    
T  13699799 ca 13699800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 20725495 - 20725599
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||  ||  |  |||||||||||||||||||||    
T  20725495 gtcctgcacacttgaacaaatattagcatattcaattgataatttttaataccttgttatcatcaaaactctaaagggtaatgttaaacacattttgttc 20725594  T
Q  127 gaaca 131  Q
     ||||    
T  20725595 caaca 20725599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 50722127 - 50722205
Alignment:
Q  47 aatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    |||||||  ||||||||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||    
T  50722127 aatattagcatattcaattgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtt 50722205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 50790722 - 50790644
Alignment:
Q  47 aatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    |||||||  ||||||||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||    
T  50790722 aatattagcatattcaattgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtt 50790644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 3087860 - 3087980
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgt 110  Q
    ||||||||||||||| ||||| |||||||||| ||||||||  |||| |||||||    ||||||||| ||||||| ||||||||| ||  ||  |||||    
T  3087860 aaatttttagtttatggtcctgcacacttgaacaaatattagcatatccaattgattttttttaatacattgttattatcaaaacttaatgtggtaatgt 3087959  T
Q  111 taaacacattttgttcgaaca 131  Q
    |||||| ||||||||| ||||    
T  3087960 taaacaaattttgttccaaca 3087980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 21317706 - 21317799
Alignment:
Q  38 acttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||| ||||||||  |||| |||||||   |||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||| ||||    
T  21317706 acttgaacaaatattagcatatccaattgactctttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 21317799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 1470115 - 1470175
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||| ||||||||||||||||    
T  1470115 acacttgaacaaatattagcatatccaattgaacttttaataccatgttatcatcaaaact 1470175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 14077138 - 14077034
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||| |||||||||| ||||||||  | |||||||||| | |||||||||| |||||||||||||||| ||| ||  | ||| |||||||||||||||     
T  14077138 gtcctgcacacttgaacaaatattagcacattcaattgacatttttaataccctgttatcatcaaaactcaaagtggtattgtcaaacacattttgttcc 14077039  T
Q  128 aacat 132  Q
    |||||    
T  14077038 aacat 14077034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 4242958 - 4242855
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||| |||||||||| ||||||||  |||| ||||||| | |||||||| |||||||||||||||||| ||| ||  | ||||||||||||| |||||     
T  4242958 gtcctgcacacttgaacaaatattagcatatccaattgacatttttaatatcttgttatcatcaaaactcaaaatggtattgttaaacacattatgttcc 4242859  T
Q  128 aaca 131  Q
    ||||    
T  4242858 aaca 4242855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 20418574 - 20418641
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  ||||||||||||  ||||||||||||||| |||||||||||    
T  20418574 gtcctgcacacttgaacaaatattagcatattcaattgacattttaataccttgttgtcatcaaaact 20418641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 7494666 - 7494768
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||| |  |||||||||  ||||||||| ||||||||||||||||| ||  ||  ||| | ||||||||||||||| |    
T  7494666 gtcctgcacacttgaataaatattaacaatttcaattgacattttaatactttgttatcatcaaaacttaaggtggtaatatgaaacacattttgttcca 7494765  T
Q  129 aca 131  Q
    |||    
T  7494766 aca 7494768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 16032884 - 16032981
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||||||||||  |||| |||||||  | |||||||||||||||||||||||||||  ||  |  ||||| ||||||||||||||| ||||    
T  16032884 acacttgaaaaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctaaagggtaatgtaaaacacattttgttccaaca 16032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 6713473 - 6713568
Alignment:
Q  37 cacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||| ||||||||| |||| |||||||  ||||  ||||||||||||||||||||||| |||  || |||||||| |||||||||||| ||||    
T  6713473 cacttgaacaaatattaacatatccaattgacattttttaataccttgttatcatcaaaactcaaa-ggataatgttaagcacattttgttccaaca 6713568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 17768810 - 17768749
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| ||| ||||||||  |||| ||||||||||||||||| ||||||||||||||||||    
T  17768810 cacactcgaacaaatattagcatatccaattgaacttttaatatcttgttatcatcaaaact 17768749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 19070111 - 19070050
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| ||| ||||||||  |||| ||||||||||||||||| ||||||||||||||||||    
T  19070111 cacactcgaacaaatattagcatatccaattgaacttttaatatcttgttatcatcaaaact 19070050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 19249181 - 19249065
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaa 114  Q
    |||| |||||| ||||| |||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||  ||  |  ||| |||||    
T  19249181 tttttgtttatggtcctgcacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaactctaaagggtaatattaaa 19249082  T
Q  115 cacattttgttcgaaca 131  Q
    |||||||||||| ||||    
T  19249081 cacattttgttccaaca 19249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 33583644 - 33583728
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| || |||||||||  ||||||||| ||||||||  ||||||||||||  | ||| |||||||||||||||||||||||    
T  33583644 aattttttgtctatagtcctgtacacttgaacaaatattagcatattcaattgactattttgaataccttgttatcatcaaaact 33583728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 33598264 - 33598348
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| || |||||||||  ||||||||| ||||||||  ||||||||||||  | ||| |||||||||||||||||||||||    
T  33598264 aattttttgtctatagtcctgtacacttgaacaaatattagcatattcaattgactattttgaataccttgttatcatcaaaact 33598348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 41495378 - 41495439
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||||||||||| | |||||||||||||||||||||||||||    
T  41495378 acacttgaacaaatattagcatattcaattgacaattttaataccttgttatcatcaaaact 41495439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 16199583 - 16199460
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgtt 111  Q
    ||||||| || ||| ||||| | |||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||  |   |  ||||||    
T  16199583 aattttttgtctatggtcctgcgcacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctatagggtaatgtt 16199484  T
Q  112 aaacacattttgttcgaacatact 135  Q
    ||||||| ||||||| ||||||||    
T  16199483 aaacacactttgttccaacatact 16199460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 16304965 - 16304869
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    |||| |||| ||||| ||||||||  || | |||||||||||||| ||||||||||||||||||||  ||  || |||||| ||||| |||||||||    
T  16304965 tcctgcacatttgaacaaatattagcatgtccaattgaacttttattaccttgttatcatcaaaacataatgtggcaatgtcaaacatattttgttc 16304869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 19197614 - 19197519
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| ||||||| | ||||||||||||||||||||||||||| |||  |  |||||||||| |||||||||| ||||    
T  19197614 acacttgaacaaatattagcatatccaattgacatttttaataccttgttatcatcaaaacttaaa-gggtaatgttaaacgcattttgttccaaca 19197519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 49553243 - 49553144
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||| ||||||||||||||||   ||  || ||||||||||||||||||||| |||||    
T  49553243 acacttgaacaaatattagcatattcaattgacaatttttaataccctgttatcatcaaaactcttaaaggataatgttaaacacattttgttccaacat 49553144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 50300621 - 50300715
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||| |||| |||||||  | |||||||||||||||||||||||||||   | |   ||||||||||||||||||||| ||||    
T  50300621 acacttgaacaaatattaacatatccaattgacaatttttaataccttgttatcatcaaaactcggatt---aatgttaaacacattttgttctaaca 50300715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 19225795 - 19225854
Alignment:
Q  37 cacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||| ||||||||  |||||||||||| ||||||||| ||||||| ||||||||||    
T  19225795 cacttgaacaaatattagcatattcaattgatcttttaatatcttgttaccatcaaaact 19225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 24775254 - 24775192
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| |||||||||||  || ||||||||| |||||||||||||||||    
T  24775254 acacttgaacaaatattaacatattcaattgacaatttttaatactttgttatcatcaaaact 24775192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 52920809 - 52920907
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  || ||||||||||||||||||||| ||||    
T  52920809 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 52920907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 5216382 - 5216455
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||||||||||  || ||||||||| |||||||||||||||||    
T  5216382 tatagtcctggacacttgaacaaatattagcatattcaattgacaatttttaatactttgttatcatcaaaact 5216455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 12968750 - 12968846
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||| |||||||||||||||||| |||  |  ||||||||||||||||||||| ||||    
T  12968750 acacttgaacaaatattagcatatccaattgacaatttttaatatcttgttatcatcaaaactcaaa-gggtaatgttaaacacattttgttccaaca 12968846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 14131675 - 14131589
Alignment:
Q  46 aaatattaatatattcaattgaactttt-aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||| ||| ||||||||| ||||| ||||||||||||||||||||| | ||| ||  | ||| ||||||||||||||| ||||    
T  14131675 aaatattagtattttcaattgacctttttaataccttgttatcatcaaaattcaaagtggtattgtcaaacacattttgttctaaca 14131589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 26417447 - 26417378
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  26417447 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 26417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 29855819 - 29855892
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  29855819 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 29855892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 46796151 - 46796078
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  ||||||||||||  | ||||||||| |||||||||||||||||    
T  46796151 tatagtcctgtacacttgaacaaatattagcatattcaattgacaatttttaatactttgttatcatcaaaact 46796078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 8728779 - 8728682
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    ||||| |||||||||| ||||||||  ||||  |||||| | |||| ||||||||||||| |||||||| ||| ||  | ||||||||||||||||||    
T  8728779 gtcctgcacacttgaacaaatattagcatatctaattgacattttttataccttgttatcctcaaaactcaaagtggtattgttaaacacattttgtt 8728682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 9080666 - 9080569
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    ||||| |||||||||| ||||||||  ||||  |||||| | |||| ||||||||||||| |||||||| ||| ||  | ||||||||||||||||||    
T  9080666 gtcctgcacacttgaacaaatattagcatatctaattgacattttttataccttgttatcctcaaaactcaaagtggtattgttaaacacattttgtt 9080569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 14392761 - 14392659
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa--ctaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||  || |||  |  ||||||||||||||||||||| ||||    
T  14392761 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaaatctcaaa-gggtaatgttaaacacattttgttccaaca 14392663  T
Q  132 tact 135  Q
    ||||    
T  14392662 tact 14392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 16794041 - 16793980
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||||||||||||||||||| ||  ||  || |||||||||||||||||| ||||    
T  16794041 ttttaataccttgttatcatcaaaacttaaggtggtaaagttaaacacattttgttccaaca 16793980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 17697971 - 17698066
Alignment:
Q  37 cacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||| ||||||||  |||| |||||||  | ||||||||||||||||||||||||||| |||  |  ||||||||||||||||| ||| ||||    
T  17697971 cacttgaataaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacatttttttccaaca 17698066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 31303793 - 31303892
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||| |||||||||||  || ||||||||| |||| ||||||||||||   ||  || ||||||||||||||||| ||| |||||    
T  31303793 acacttgaacaaatattaacatattcaattgacaatttttaatacattgtaatcatcaaaactctcaaaggataatgttaaacacattttattccaacat 31303892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 38177444 - 38177345
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  38177444 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 38177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 5798004 - 5797925
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||||  | || |||||||||| | | ||||| |||| ||||||  |||||| |||||||||||||||||||||    
T  5798004 ttttagtttatgattctgcacacttgaacatacattaacatatccaattgttcttttagtaccttgttatcatcaaaact 5797925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 7477910 - 7477997
Alignment:
Q  38 acttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    ||||||| ||||||||  |  |||||||||  ||||||||||||||| ||||||||||| ||  ||  ||||| ||||||||||||||    
T  7477910 acttgaacaaatattagcaatttcaattgacattttaataccttgttttcatcaaaacttaaggtggtaatgtgaaacacattttgtt 7477997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 11223950 - 11224012
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  11223950 acacttgaacaaatattagcatatccaattgacaaattttaataccttgttatcatcaaaact 11224012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 11869489 - 11869551
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  11869489 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 11869551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 19643302 - 19643223
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||| ||||| |||| || || ||||||| | |||| ||||||| ||||||||| ||||| ||||||||||||    
T  19643302 ttttagtctatggtcctgcacaatttaacaaatattgacatatccaattgatcttttaatatcttgtcatcatcaaaact 19643223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 20627235 - 20627173
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| |||||||   ||||||||||||  | |||||||||||||||||||||||||||    
T  20627235 acacttgaacaaatattggcatattcaattgacaatttttaataccttgttatcatcaaaact 20627173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 20646558 - 20646620
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||  |||| |||||||  | |||||||||||||||||||| ||||||    
T  20646558 acacttgaaaaaatattagcatatccaattgacaatttttaataccttgttatcatgaaaact 20646620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 28582511 - 28582573
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  28582511 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 28582573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 49666151 - 49666089
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  49666151 acacttgaaaaaatattagaatatccaattgacaatttttaatactttgttatcatcaaaact 49666089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 54284758 - 54284691
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||| | ||||||||  |||| ||||||| ||||||| ||||| ||||||||||||||    
T  54284758 gtcctgcacacttggacaaatattagcatatccaattgatcttttaacacctttttatcatcaaaact 54284691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 1727790 - 1727717
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  1727790 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 1727717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 6252599 - 6252530
Alignment:
Q  56 atattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    |||| |||||||  ||||||||| |||||||||| |||||| ||  ||  ||||||||||||||||||||    
T  6252599 atatccaattgactttttaatactttgttatcattaaaacttaaggtggtaatgttaaacacattttgtt 6252530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 10626565 - 10626536
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  10626565 ttttaataccttgttatcatcaaaactaaa 10626536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 10654905 - 10654876
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  10654905 ttttaataccttgttatcatcaaaactaaa 10654876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 12397513 - 12397616
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  ||||  ||||||  | |||||||| |||||||||||||||||| |||  |  ||||||||| |||||||||||    
T  12397513 gtcctgcacacttgaacaaatattagcatatctaattgacaatttttaatatcttgttatcatcaaaacttaaa-aggtaatgttaaagacattttgttc 12397611  T
Q  127 gaaca 131  Q
     ||||    
T  12397612 caaca 12397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 12962878 - 12962794
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| || ||| |||||  ||||||||||||||||||  ||||  ||||||  | |||||||||||| ||||||||||||||    
T  12962878 aattttttgtctatggtcctgtacacttgaaaaaatattagcatatctaattgacaatttttaataccttattatcatcaaaact 12962794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 16658395 - 16658335
Alignment:
Q  38 acttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  16658395 acttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 16658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 16882731 - 16882788
Alignment:
Q  70 ttttaataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttc 126  Q
    |||||||||||| ||||||||||||| ||||  ||  |||||||||||||||||||||    
T  16882731 ttttaataccttattatcatcaaaacttaaaggtggtaatgttaaacacattttgttc 16882788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 37467706 - 37467767
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||||||||| | | |||||||||| ||||||||||||||||    
T  37467706 acacttgaacaaatattagcatattcaattaacaattttaataccgtgttatcatcaaaact 37467767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 46349597 - 46349521
Alignment:
Q  22 gtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||  ||||||||| ||||||||  ||||  ||||||  | |||||||||||||||||||||||||||    
T  46349597 gtttataatcctgtacacttgaacaaatattagcatatctaattgacaatttttaataccttgttatcatcaaaact 46349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 15903611 - 15903666
Alignment:
Q  43 aaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  15903611 aaaaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 15903666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 4630 - 4744
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||||| |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||||||||||| ||  |||||||||||||||    
T  4630 ttttagtctatggtcctgcacacttgaacaaatattagcatatccaattgactttttaataccttgttatcatcaaaacttaaggtgacaatgttaaaca 4729  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  4730 cattttgttccaaca 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 20237172 - 20237076
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||| ||||    
T  20237172 cacacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 20237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 18672498 - 18672388
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    ||||||||||| |||  | || |||||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||||||||  || ||||| ||    
T  18672498 aaatttttagtctatgtttctgcacacttgaacaaatattaacatattcaattgaacttttaatacttttttatcatcaaaactaaaggtggcaatgcta 18672399  T
Q  113 aacacattttg 123  Q
    |||||||||||    
T  18672398 aacacattttg 18672388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 27275976 - 27275889
Alignment:
Q  39 cttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    |||||| ||||||||  |||||||||||||||||||||||||||  |||||||||||  ||  ||| |||||||||||||||||||||    
T  27275976 cttgaacaaatattagcatattcaattgaacttttaataccttggaatcatcaaaacataaggtgataatgttaaacacattttgttc 27275889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26118424 - 26118330
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac 95  Q
    |||||| ||||| || ||||||| ||| || || |||||||||| || |||||| |||||||||||||| || ||||||||||||||||||||||    
T  26118424 ttttaagacatataaattttagtctatggttctgcacacttgaacaattattaacatattcaattgaacattaaataccttgttatcatcaaaac 26118330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 23590123 - 23590227
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-actttt-aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||| |||| ||||||| |||||| ||||||||||||||||||||||| ||| ||  | ||||||||| |||||||||    
T  23590123 gtcctgcacacttgaacaaatattaacatatccaattgacactttttaataccttgttatcatcaaaacttaaagtggtattgttaaacatattttgttc 23590222  T
Q  127 gaaca 131  Q
     ||||    
T  23590223 caaca 23590227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 17815368 - 17815468
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa-ctaaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  ||||||||||||  | ||||||||||||||||||||||||| ||  ||  || ||||||||||||||||||||| |||||    
T  17815368 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaaccttcaaaggataatgttaaacacattttgttccaacat 17815467  T
Q  133 a 133  Q
    |    
T  17815468 a 17815468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 20969590 - 20969686
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||| || ||||||||  |||| |||||||  |||||| |||||||||||||||||||| ||  ||  ||||||||||||||||||||| ||||    
T  20969590 cacacttaaacaaatattagcatatccaattgactttttaagaccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 20969686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 34638861 - 34638964
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactt-ttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||| |||||||||| ||||||||  |||| |||||||  || ||||||||||||||||||||||||| |||  |  ||||||||||||||||| |||     
T  34638861 gtcctgcacacttgaacaaatattagcatatccaattgatattcttaataccttgttatcatcaaaactcaaaagggtaatgttaaacacattttattcc 34638960  T
Q  128 aaca 131  Q
    ||||    
T  34638961 aaca 34638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 12079220 - 12079278
Alignment:
Q  38 acttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  12079220 acttgaacaaatattagcatatctaattgaacttttaataccttgttatcatcaaaact 12079278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 12352579 - 12352510
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||| |||| |||||||  | |||||||||||||||||||||||||||    
T  12352579 gtcctgcacacttgaacaaatattaacatatacaattgacgatttttaataccttgttatcatcaaaact 12352510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 25460009 - 25460057
Alignment:
Q  46 aaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  25460009 aaatattagtatattcaattgatcttttaatactttgttatcatcaaaa 25460057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 26784734 - 26784840
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgtt 125  Q
    |||||| ||||||||| ||||||||  |||| |||||||  | ||||||| |||||||||||||||||||   ||  || ||||||||||||||||||||    
T  26784734 gtcctatacacttgaacaaatattagcatatccaattgacaatttttaattccttgttatcatcaaaactcttaaaggataatgttaaacacattttgtt 26784833  T
Q  126 cgaacat 132  Q
    | |||||    
T  26784834 ccaacat 26784840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 10849147 - 10849232
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||| || ||||||||| |||||||||| |||||||| |||||  ||||||  | ||||||||| || ||||||||||||||    
T  10849147 aaattttttgtctatagtcctgcacacttgaacaaatattagtatatcaaattgataatttttaatactttattatcatcaaaact 10849232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 31588796 - 31588682
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    |||| |||||| ||| | ||||||| || ||||||||  |||| |||||||| |||||||||||||||| ||||| |||| ||  ||   ||||||||||    
T  31588796 tttttgtttatggtcttgcacactttaacaaatattagcatatccaattgaaattttaataccttgttaccatcagaacttaaggtggtcatgttaaaca 31588697  T
Q  117 cattttgttcgaaca 131  Q
     ||||||||| ||||    
T  31588696 tattttgttccaaca 31588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 39798664 - 39798582
Alignment:
Q  49 tattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||||| | ||  ||  ||||||||| ||||||||||| ||||    
T  39798664 tattagtatatccaattgacattttaataccttgttatcatcaaaaattaaggtggtaatgttaaatacattttgttccaaca 39798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 26119578 - 26119513
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    ||||| |||||||||||||||||||  |||| ||||||    ||||||||||||||||||||||||    
T  26119578 gtcctgcacacttgaaaaaatattaccatatccaattggcagtttaataccttgttatcatcaaaa 26119513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 29138158 - 29138082
Alignment:
Q  22 gtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  29138158 gtttatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 29138082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 4887396 - 4887507
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattt 121  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||   ||  |  ||||||||||||||||    
T  4887396 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattt 4887495  T
Q  122 tgttcgaacata 133  Q
    ||||| ||||||    
T  4887496 tgttccaacata 4887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 19749881 - 19749961
Alignment:
Q  46 aaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    ||||||||  |||| ||||||| | ||||||||||||||||||||||||||| ||  ||  | ||||||||||||||||||    
T  19749881 aaatattagcatatccaattgacatttttaataccttgttatcatcaaaactcaaggtggtattgttaaacacattttgtt 19749961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 24547975 - 24547911
Alignment:
Q  67 aacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||| ||| |||||||||||||| |||  |||| ||||||||| ||||||||| ||||    
T  24547975 aacttttaatatcttattatcatcaaaacttaaagagacattgttaaacatattttgttctaaca 24547911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 26251441 - 26251571
Alignment:
Q  4 taaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaac 101  Q
    ||||||||  || |||| || ||| ||||| | |||||||| ||||||||  |||| |||||||  ||||  ||||||||||||||||||||||| |||     
T  26251441 taaaacatttaactttttgtctatggtcctgcgcacttgaacaaatattagcatatccaattgacattttttaataccttgttatcatcaaaacttaaag 26251540  T
Q  102 -tgacaatgttaaacacattttgttcgaaca 131  Q
     ||  | ||||||||||||||||||| ||||    
T  26251541 gtggtagtgttaaacacattttgttccaaca 26251571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 89188 - 89127
Alignment:
Q  37 cacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  89188 cacttgaataaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 89127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 6499623 - 6499684
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaac 95  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||| |||||||||||||||    
T  6499623 acacttgaacaaatattagcatattcaattgacaatttttaataccctgttatcatcaaaac 6499684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 6512201 - 6512140
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaac 95  Q
    ||||||||| ||||||||  |||| |||||||  | ||||||||||||||||||||||||||    
T  6512201 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaac 6512140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 9089303 - 9089376
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||| ||||  ||||| |||||||||||||||||    
T  9089303 tatagtcctgtacacttgaacaaatattagcatatccaattgaaattttttaatactttgttatcatcaaaact 9089376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 21660613 - 21660686
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||||||||||||   ||| |||||||  | ||||||||| |||||||||||||||||    
T  21660613 tatagtcctgtacacttgaaaaaatattagcgtatccaattgacaatttttaatactttgttatcatcaaaact 21660686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 25096564 - 25096495
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||| ||||| ||||||||  |||||||||| |  | |||||||||||||||||||||||||||    
T  25096564 gtcctgcacatttgaacaaatattagcatattcaattaacaatttttaataccttgttatcatcaaaact 25096495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 25154534 - 25154465
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||| ||||| ||||||||  |||||||||| |  | |||||||||||||||||||||||||||    
T  25154534 gtcctgcacatttgaacaaatattagcatattcaattaacaatttttaataccttgttatcatcaaaact 25154465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 31118249 - 31118322
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| ||||| |  | |||||||||||||||||||||||||||    
T  31118249 tatagtcctgtacacttgaacaaatattagcatatccaatttacaatttttaataccttgttatcatcaaaact 31118322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 35931758 - 35931685
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||| ||||||||  |||| |||||||  | ||||| ||| |||||||||||||||||    
T  35931758 tatagtcctatacacttgaacaaatattagcatatccaattgacaatttttactactttgttatcatcaaaact 35931685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 2152681 - 2152576
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgt-taaacacattttgttc 126  Q
    |||||||||||||||| ||||||||  |||| |||||   | ||||||||| ||||||||||||||||| ||| ||  | |||  |||||||||||||||    
T  2152681 gtcctacacacttgaacaaatattagcatatccaattatcatttttaatactttgttatcatcaaaactcaaaatggtattgtcaaaacacattttgttc 2152582  T
Q  127 gaacat 132  Q
     |||||    
T  2152581 caacat 2152576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 7745399 - 7745339
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa 94  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||    
T  7745399 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaa 7745339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 14086290 - 14086229
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||| | |||||||| ||||||||||||||||||    
T  14086290 acacttgaacaaatattagcatatccaattgacaattttaatatcttgttatcatcaaaact 14086229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 27203553 - 27203524
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  27203553 ttttaataccttgttatcatcaaaactaaa 27203524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 9398498 - 9398435
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||  |||| |||||||  | |||||||||||| ||||||||||||||    
T  9398498 cacacttgaacaaatattagcatatccaattgacaatttttaataccttattatcatcaaaact 9398435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 18513836 - 18513892
Alignment:
Q  38 acttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    ||||||| |||||||   |||| |||||||| |||||||||||||||||||| ||||    
T  18513836 acttgaacaaatatttgcatatccaattgaatttttaataccttgttatcatgaaaa 18513892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 22403857 - 22403751
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  ||||| ||||||  ||||  |||| |||||||||||||||||| |||  |  ||||||| ||||||||| |||    
T  22403857 gtcctccacacttgaacaaatattagcatatttaattgacattttttaatatcttgttatcatcaaaactcaaa-gggtaatgttacacacattttattc 22403759  T
Q  127 gaacatac 134  Q
     |||||||    
T  22403758 caacatac 22403751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 715 - 837
Alignment:
Q  11 taaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgt 110  Q
    ||||||||||||| ||| ||||| |||||||||| ||||||||  |||  ||||||||||||||||  | |||||||||||||||| || |||| |||||    
T  715 taaaatttttagtctatggtcctgcacacttgaacaaatattagcatagccaattgaacttttaatttcatgttatcatcaaaacttaagctgaaaatgt 814  T
Q  111 taaacacattttgttcgaacata 133  Q
    |||||| ||||||||| ||||||    
T  815 taaacaaattttgttccaacata 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 23192379 - 23192261
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    ||||||||||||||| ||||| |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||||||||||| ||  ||  |||||||    
T  23192379 aaatttttagtttatggtcctgcacacttgaacaaatattagcatatccaattgactttttaataccttgttatcatcaaaacttaaggtggtaatgtta 23192280  T
Q  113 aacacattttgttcgaaca 131  Q
    ||| |||||||||| ||||    
T  23192279 aactcattttgttccaaca 23192261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 19505242 - 19505141
Alignment:
Q  18 tttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacac 117  Q
    |||||| || |||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||  || |||| ||||||||    
T  19505242 tttagtgtaaagtcctgcacacttgaacaaatattaacatatcaaattgaacttttaataccttgttatcatcaaaacttaaggtggcaatattaaacac 19505143  T
Q  118 at 119  Q
    ||    
T  19505142 at 19505141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24635726 - 24635805
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||| ||||| |||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  24635726 ttttagtctatggtcctgcacacttgaccaaatattagtatattcaattgaacttttaatactttgttatcatcaaaact 24635805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 22710958 - 22711076
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    ||||||||||| ||| |||||  ||||||||| ||||||||   ||| |||||||  ||||||||||||||||||||||||||| ||  ||  |||||||    
T  22710958 aaatttttagtctatggtcctggacacttgaacaaatattagcttatccaattgactttttaataccttgttatcatcaaaacttaaggtggaaatgtta 22711057  T
Q  113 aacacattttgttcgaaca 131  Q
    |||||||||||||| ||||    
T  22711058 aacacattttgttccaaca 22711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17689689 - 17689784
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||| || ||||||| |||  |||| |||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| ||||||    
T  17689689 ttttaagacatataaattttagtatatgttcctgcacacttgaacaaatattaacatatccaattgatcttttaataccttgttatcattaaaact 17689784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 12194273 - 12194369
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||||||||||||  |||| |||| ||  ||||||||  ||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||    
T  12194273 cacacttgaaaaaatattagcatatccaatcgacattttaatattttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 12194369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 12438701 - 12438797
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||||||||||||  |||| |||| ||  ||||||||  ||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||    
T  12438701 cacacttgaaaaaatattagcatatccaatcgacattttaatattttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 12438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 27740205 - 27740312
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||||||| ||  | ||| |||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||  || || ||||||||     
T  27740205 ttttagtttatggttatgcacgcttgaacaaatattaacatattcaattgaacttttaatactttgttatcctcaaaacttaagatg-cattgttaaact 27740303  T
Q  117 cattttgtt 125  Q
    |||||||||    
T  27740304 cattttgtt 27740312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 1208458 - 1208353
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||||| |||||||||| ||||||||  ||||  |||  | | |||||||||||||||||||||||||| ||  || ||||||||||||    
T  1208458 ttttagtctatggtcctgcacacttgaacaaatattagcatatctaatcaatcatttaataccttgttatcatcaaaacttaaggtggcaatgttaaaca 1208359  T
Q  117 catttt 122  Q
    ||||||    
T  1208358 catttt 1208353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 13581646 - 13581590
Alignment:
Q  38 acttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    ||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  13581646 acttgaacaaatattaacatatgcaattgaacttttaatacctcgttatcatcaaaa 13581590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 17267868 - 17267930
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||||||||||| |||||  ||||||  |||||||||||||||||||||||||||||    
T  17267868 acacttgaaaaaatattattatatctaattgacaacttttaataccttgttatcatcaaaact 17267930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 17937691 - 17937746
Alignment:
Q  39 cttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    |||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  17937691 cttgaacaaatattaacatatccaattgatcttttaataccttgttatcatcaaaa 17937746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 17914856 - 17914953
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | ||||||||||||||||||||||||||| | |  |  ||||||||||||||||||||| ||||    
T  17914856 acacttgaacaaatattatcatatccaattgacaatttttaataccttgttatcatcaaaactcacaaaggtaatgttaaacacattttgttccaaca 17914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 23772762 - 23772830
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| |||||||||||||| ||||| |  | |||||||||||||||||||||||||||    
T  23772762 tcctgcacacttgaacaaatattaatatatccaattaacaatttttaataccttgttatcatcaaaact 23772830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 29693692 - 29693812
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgt 110  Q
    ||||||| || ||| |||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  || |||||    
T  29693692 aattttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaaggataatgt 29693791  T
Q  111 taaacacattttgttcgaaca 131  Q
    |||||||||||||||| ||||    
T  29693792 taaacacattttgttccaaca 29693812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13430388 - 13430326
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||  |||||||||||  || ||||||||| |||||||||||||||||    
T  13430388 acacttgaaaaaatattagcatattcaattgacaatttttaatactttgttatcatcaaaact 13430326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 17525484 - 17525422
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| |||| |||||||  | |||||||||||||||||||||||||||    
T  17525484 acacttgaacaaatattaacatatccaattgacaatttttaataccttgttatcatcaaaact 17525422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 18719363 - 18719458
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | ||||||||| ||||||||||||||||| |||  |  ||||||||||||||||||||| ||||    
T  18719363 acacttgaacaaatattagcatatccaattgacaatttttaatacattgttatcatcaaaactcaaa--ggtaatgttaaacacattttgttccaaca 18719458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 19707902 - 19708004
Alignment:
Q  33 tacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaac 130  Q
    |||||||||||| ||||||||  |||| |||||||  | ||||||||  |||||||||||||||||  ||  |  ||||||||||||||||||||| |||    
T  19707902 tacacacttgaacaaatattagcatatccaattgacaatttttaatattttgttatcatcaaaactctaaaggttaatgttaaacacattttgttccaac 19708001  T
Q  131 ata 133  Q
    |||    
T  19708002 ata 19708004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 19927435 - 19927505
Alignment:
Q  28 agtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||| ||||||||  |||| |||||||  ||||||||||| |||||||||||||||||    
T  19927435 agtcctatacacttgaacaaatattagcatatccaattgacaacttttaatactttgttatcatcaaaact 19927505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 24497895 - 24497840
Alignment:
Q  41 tgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||| ||||||||  |||| ||||||||||||||||||||||||||| ||||||||    
T  24497895 tgaacaaatattagcatatccaattgaacttttaataccttgttatcttcaaaact 24497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 3598094 - 3598021
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  ||||||||||||  | ||||||||| |||||||||||||||||    
T  3598094 tatagtcctgtacacttgaacaaatattagcatattcaattgacaatttttaatacattgttatcatcaaaact 3598021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 9320973 - 9321046
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||||||||||||  |||| ||||||  || |||||||||||||||||||||| ||||    
T  9320973 tatagtcctgtacacttgaaaaaatattagcatatccaattgacaatttttaataccttgttatcatcataact 9321046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 14989222 - 14989149
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||| |||| |||||||  | ||||||||| |||||||||||||||||    
T  14989222 tatagtcctgtacacttgaacaaatattaacatatccaattgacaatttttaatactttgttatcatcaaaact 14989149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 33083254 - 33083323
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||| |||| |||||||  | |||||||| ||||||||||||||||||    
T  33083254 gtcctgcacacttgaacaaatattaacatatccaattgacaatttttaatatcttgttatcatcaaaact 33083323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 43645221 - 43645283
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacat 132  Q
    |||||||||||||||||||||||||||  ||  |  ||||||||||||||||||||| |||||    
T  43645221 ttttaataccttgttatcatcaaaactctaaagggtaatgttaaacacattttgttccaacat 43645283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 45538220 - 45538147
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  45538220 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 45538147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 18773023 - 18773126
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| ||||| |  | ||||||||||||||||||||||||||| |||  |  ||||||||| |||||||||||    
T  18773023 gtcctgcacacttgaacaaatattagcatatccaattaacaatttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaatacattttgttc 18773121  T
Q  127 gaaca 131  Q
     ||||    
T  18773122 caaca 18773126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 19156579 - 19156640
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||| | |||||||||||||||||||||||||||    
T  19156579 acacttgaacaaatattagcatatccaattgacaattttaataccttgttatcatcaaaact 19156640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 22461385 - 22461282
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | ||||||||| ||||||||||||||||| |||  |  |||||||||||||| ||||||    
T  22461385 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaactcaaa-gggtaatgttaaacacatattgttc 22461287  T
Q  127 gaaca 131  Q
     ||||    
T  22461286 caaca 22461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 22663538 - 22663610
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||| ||||| ||||||||| ||||||||  ||||||| |||| | ||||||||| |||||||||||||||||    
T  22663538 tataatcctatacacttgaacaaatattagcatattcagttgacaattttaatactttgttatcatcaaaact 22663610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 22674185 - 22674257
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| ||||||| | ||||||||| |||||||||||||||||    
T  22674185 tatagtcctgtacacttgaacaaatattagcatatccaattgacaattttaatactttgttatcatcaaaact 22674257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 1238066 - 1238128
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  1238066 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 1238128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 18120878 - 18120816
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaac--ttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||||   |||||||||||||||||||||||||||    
T  18120878 acacttgaacaaatattagcatatccaattgaaaaattttaataccttgttatcatcaaaact 18120816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 18680195 - 18680257
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  18680195 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 18680257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 26833446 - 26833551
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | ||||||||| ||||||||||||||||| |||  |  |||| |||||||||||| |||    
T  26833446 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaactcaaa-gggtaatgctaaacacatttttttc 26833544  T
Q  127 gaacata 133  Q
     ||||||    
T  26833545 caacata 26833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 6408105 - 6408178
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  6408105 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 6408178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 18722393 - 18722324
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||   ||| |||||||  | |||||||||||||||||||||||||||    
T  18722393 gtcctgcacacttgaacaaatattagcgtatccaattgataatttttaataccttgttatcatcaaaact 18722324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 21288784 - 21288857
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||| ||||||||   ||| |||||||  | ||||||||| |||||||||||||||||    
T  21288784 tatagtcctatacacttgaacaaatattagcgtatccaattgacaatttttaatactttgttatcatcaaaact 21288857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 43640179 - 43640252
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| |||||||| | ||| |||||||  | ||||||||| |||||||||||||||||    
T  43640179 tatagtcctgtacacttgaacaaatattagtgtatccaattgacaatttttaatactttgttatcatcaaaact 43640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 19956065 - 19956000
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacatact 135  Q
    |||||||||||| ||||||||||||||  ||  |  ||||||||||||||||| ||| ||||||||    
T  19956065 ttttaataccttattatcatcaaaactctaaagggtaatgttaaacacattttattccaacatact 19956000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 23352805 - 23352745
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||||||||||||||||||| |||  |  |||||||| |||||||||||| ||||    
T  23352805 ttttaataccttgttatcatcaaaactcaaa-gggtaatgttaagcacattttgttccaaca 23352745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 24646736 - 24646796
Alignment:
Q  38 acttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  24646736 acttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 24646796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 20255329 - 20255261
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||||| |||||| || |||||||   |||| ||||||| | |||||||||||||||||||||||||||    
T  20255329 gtcctatacactttaacaaatatttgcatatccaattgacaattttaataccttgttatcatcaaaact 20255261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 14356879 - 14356777
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    |||||||||||||||| ||||||||  ||||||||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||| |    
T  14356879 gtcctacacacttgaacaaatattagcatattcaattgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttcca 14356780  T
Q  129 aca 131  Q
    |||    
T  14356779 aca 14356777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 20577615 - 20577726
Alignment:
Q  20 tagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacat 119  Q
    |||| ||| ||||| | |||||||| ||||||||  |||| |||||||| ||||||||||||||||||||||||||| ||  ||| ||||||||||||||    
T  20577615 tagtctatggtcctgcgcacttgaacaaatattagcatatccaattgaaattttaataccttgttatcatcaaaacttaaggtgaaaatgttaaacacat 20577714  T
Q  120 tttgttcgaaca 131  Q
    ||||||| ||||    
T  20577715 tttgttccaaca 20577726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 17812127 - 17812014
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||| | |||| ||||| ||| ||||  |||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  17812127 ttttagtctatggtcttgcacatttgaacaaacattagcatatccaattgaacttttaataccttgttatcatcaaaact-taagtgacaatgttaaaca 17812029  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  17812028 cattttgttccaaca 17812014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 2652138 - 2652234
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||| ||||    
T  2652138 cacacttgaacaaatattagcatatccaattgactttttaataccttgttatcatcaaaactaaaggtgatagtgttaaacacattttgttcaaaca 2652234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23087991 - 23088084
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    |||||| ||||| || ||||||| ||| ||||| |||||||||| ||||||||| |||||||||||||  |||||||| |||||||||||||||    
T  23087991 ttttaagacatataaattttagtatatggtcctgcacacttgaacaaatattaacatattcaattgaatgtttaatactttgttatcatcaaaa 23088084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 12417325 - 12417222
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||| |||||||||| ||||||||  |||| ||||||| | ||||||||||||||||||||||||||| |||  |  |||||||||||||||||||||     
T  12417325 gtcctgcacacttgaacaaatattagcatatccaattgacatttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacattttgttcc 12417227  T
Q  128 aacat 132  Q
    |||||    
T  12417226 aacat 12417222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 21350345 - 21350237
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||| | |||||||||| |||||| |  |||| |||||||  ||||||||||||||||||||||||||| ||  ||  |||||||||||    
T  21350345 ttttagtctatggtcatgcacacttgaacaaatatcagaatatccaattgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaaca 21350246  T
Q  117 cattttgtt 125  Q
    |||||||||    
T  21350245 cattttgtt 21350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 10250222 - 10250326
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| |||||||| ||||  ||||||||||||||||||||||| |||  |  |||||||||||||||||||||    
T  10250222 gtcctgcacacttgaacaaatattatcatatccaattgaatttttttaataccttgttatcatcaaaacttaaa-gggtaatgttaaacacattttgttc 10250320  T
Q  127 gaacat 132  Q
     |||||    
T  10250321 caacat 10250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 17526209 - 17526091
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||| | |||||||||| | ||||||  |||| ||||||||||||||||||||  |||||||||||||| |||  | || || |||| |    
T  17526209 ttttagtatatggtcttgcacacttgaacacatattagcatatccaattgaacttttaatacctcattatcatcaaaactcaaagagtcattgataaata 17526110  T
Q  117 cattttgttcgaacatact 135  Q
    |||||||||| ||||||||    
T  17526109 cattttgttccaacatact 17526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19809972 - 19809906
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| |||||||| ||||||||||||| ||||||||| ||||||| ||||||||||    
T  19809972 tcctgcacacttgaacaaatattagtatattcaattgatcttttaataacttgttagcatcaaaact 19809906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24619904 - 24619998
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac 95  Q
    |||||| ||||| || |||| |||||| ||  | |||||||||| |||||||| ||||| |||||||||||||||||  ||||||||||||||||    
T  24619904 ttttaagacatataaatttttgtttatggttttgcacacttgaacaaatattagtatatccaattgaacttttaatattttgttatcatcaaaac 24619998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 11901607 - 11901717
Alignment:
Q  22 gtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacat 119  Q
    |||||| ||||| || ||||||| ||||||||  |||| |||||||  | ||||||||||||||||||||||||||| |||  |  ||||||||||||||    
T  11901607 gtttatggtcctgcagacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacat 11901705  T
Q  120 tttgttcgaaca 131  Q
    ||||||| ||||    
T  11901706 tttgttccaaca 11901717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 17787751 - 17787647
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| | ||||||  ||||||||||||  | ||| ||||||||||||||||||||||| |||  |  |||||||||||||||||||||    
T  17787751 gtcctgcacacttgaacagatattagcatattcaattgacaattttcaataccttgttatcatcaaaactcaaagggt-aatgttaaacacattttgttc 17787653  T
Q  127 gaacat 132  Q
     |||||    
T  17787652 caacat 17787647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19818964 - 19818898
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| ||||||||  |||| ||||||| ||||||||| ||||||||||||||||||    
T  19818964 tcctgcacacttgaacaaatattagcatatccaattgatcttttaataacttgttatcatcaaaact 19818898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 29121761 - 29121834
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  29121761 tatagtcctatacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 29121834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 54680284 - 54680357
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||| |||| |||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  54680284 tataatcctgcacacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 54680357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 14833791 - 14833853
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  14833791 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 14833853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 19888854 - 19888751
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||| |||||||||| ||||||||  |||| ||||||| | |||||||||||| |||||||||||||  |   ||  |||||||||||||||||||||     
T  19888854 gtcctgcacacttgaacaaatattagcatatccaattgacatttttaatacctttttatcatcaaaacgtatggtggtaatgttaaacacattttgttcc 19888755  T
Q  128 aaca 131  Q
    ||||    
T  19888754 aaca 19888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 3793477 - 3793550
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  3793477 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 3793550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 10328144 - 10328078
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac 95  Q
    ||||| || ||||||| |||||||||  ||| ||||||| ||||| |||||||||||||||||||||    
T  10328144 gtcctgcatacttgaacaaatattaacgtatccaattgatcttttgataccttgttatcatcaaaac 10328078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 10693252 - 10693352
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  10693252 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaacat 10693351  T
Q  133 a 133  Q
    |    
T  10693352 a 10693352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 10907018 - 10907118
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  10907018 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaacat 10907117  T
Q  133 a 133  Q
    |    
T  10907118 a 10907118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 13306745 - 13306688
Alignment:
Q  39 cttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||||||  ||||  ||||||||||||||||| |||||||||||||||||    
T  13306745 cttgaacaaatattagcatatctaattgaacttttaatactttgttatcatcaaaact 13306688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 14902206 - 14902149
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttat 86  Q
    ||||| |||||||||| ||||||||  |||| |||||||| |||||||||||||||||    
T  14902206 gtcctgcacacttgaacaaatattagcatatccaattgaatttttaataccttgttat 14902149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 17540816 - 17540919
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||| ||  ||||  ||||||  |||||||||||||||||| |||||||||| |||  |  |||||||||||||||||||||    
T  17540816 gtcctgcacacttgaacaaataatagcatatctaattgacaacttttaataccttgttaacatcaaaactcaaa-gggtaatgttaaacacattttgttc 17540914  T
Q  127 gaaca 131  Q
     ||||    
T  17540915 caaca 17540919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 32465755 - 32465718
Alignment:
Q  59 ttcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||||| |||||||||||||||||||||||||    
T  32465755 ttcaattgaactattaataccttgttatcatcaaaact 32465718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 37985503 - 37985446
Alignment:
Q  40 ttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||| ||||||||| |||| ||||||| | |||||||||||||||||||||||||||    
T  37985503 ttgaacaaatattaacatatccaattgataattttaataccttgttatcatcaaaact 37985446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 18776351 - 18776467
Alignment:
Q  15 atttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaa 114  Q
    |||||| || ||| ||||| |||||||||| ||| |||| ||  | |||||||  |||||||||||||||| |||||||||  ||  | | |||||||||    
T  18776351 attttttgtctatggtcctgcacacttgaacaaacattagtaattccaattgacattttaataccttgttaacatcaaaacataaggtaataatgttaaa 18776450  T
Q  115 cacattttgttcgaaca 131  Q
    |||||| ||||| ||||    
T  18776451 cacattgtgttccaaca 18776467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 22089932 - 22089995
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||||||||| ||  |||| |||||||  | |||||||||||||||||||||||||||    
T  22089932 cacacttgaaaaaataatagcatatccaattgacaatttttaataccttgttatcatcaaaact 22089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 3498031 - 3498093
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  3498031 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 3498093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13575858 - 13575796
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  13575858 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 13575796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 16324235 - 16324168
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| ||||||||  |||| ||||||| | |||||||||||| ||||||||||||||    
T  16324235 tcctgcacacttgaacaaatattagcatatccaattgacatttttaatacctttttatcatcaaaact 16324168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 2940729 - 2940787
Alignment:
Q  38 acttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||  || | ||||||| ||||||||| ||||||||||||||||||    
T  2940729 acttgaacaaatattagcatgtccaattgagcttttaatatcttgttatcatcaaaact 2940787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 6517877 - 6517950
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| | ||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  6517877 tatagtcctataaacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 6517950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 17398402 - 17398329
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  17398402 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 17398329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 19885078 - 19885151
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  | || |||||||  | |||||||||||||||||||||||||||    
T  19885078 tatagtcctgtacacttgaacaaatattagaaaatccaattgacaatttttaataccttgttatcatcaaaact 19885151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 41114424 - 41114362
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| |||||||||||||||||  ||  |  ||||||||||||||||||||| |||||    
T  41114424 ttttaatacattgttatcatcaaaactctaaagggtaatgttaaacacattttgttccaacat 41114362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 8677289 - 8677229
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||| | ||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  8677289 cacacttgaacatatattaacatattcaattgtt-ttttaatactttgttatcatcaaaact 8677229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 9141260 - 9141320
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa 94  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||    
T  9141260 acacttgaataaatattagcatatccaattgacaatttttaataccttgttatcatcaaaa 9141320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 10660900 - 10660797
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||  ||||||||  |||| |||||||  | |||||||||||||||||||  |||||| |||  |  |||||||||||||||||||||    
T  10660900 gtcctgcacacttgagcaaatattagcatatccaattgacaatttttaataccttgttatcactaaaactcaaagggt-aatgttaaacacattttgttc 10660802  T
Q  127 gaaca 131  Q
     ||||    
T  10660801 caaca 10660797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 10875045 - 10874942
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||  ||||||||  |||| |||||||  | |||||||||||||||||||  |||||| |||  |  |||||||||||||||||||||    
T  10875045 gtcctgcacacttgagcaaatattagcatatccaattgacaatttttaataccttgttatcactaaaactcaaagggt-aatgttaaacacattttgttc 10874947  T
Q  127 gaaca 131  Q
     ||||    
T  10874946 caaca 10874942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 17247645 - 17247720
Alignment:
Q  23 tttatagtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    |||||||||||  ||||||||| ||||||||  |||| ||||||  || || ||| ||||||||||||||||||||    
T  17247645 tttatagtcctgtacacttgaacaaatattagcatatccaattgacaatttgtaaaaccttgttatcatcaaaact 17247720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 33378833 - 33378896
Alignment:
Q  36 acacttgaaaaaatattaata-tattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  | |||||||||||  | |||||||||||||||||||||||||||    
T  33378833 acacttgaacaaatattagcaatattcaattgacaatttttaataccttgttatcatcaaaact 33378896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 55651971 - 55651999
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaa 98  Q
    |||||||||||||||||||||||||||||    
T  55651971 ttttaataccttgttatcatcaaaactaa 55651999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 3980 - 3875
Alignment:
Q  26 atagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    |||||||| |||||||||| ||||||||  ||||||||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||    
T  3980 atagtcctgcacacttgaacaaatattagcatattcaattgacattttaataccttgttatcatcaaaacttaagatggtaatgttaaacacattttgtt 3881  T
Q  126 cgaaca 131  Q
    | ||||    
T  3880 ccaaca 3875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 11260 - 11158
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||||||||||| ||| |    
T  11260 gtcctgcacacttgaacaaatattagcatatccaattgacattttaataccttgttatcatcaaaacttaacatggtaatgttaaacacattttattcca 11161  T
Q  129 aca 131  Q
    |||    
T  11160 aca 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 32014 - 32115
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    |||| |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||    
T  32014 tcctgcacacttgaacaaatattagcatatccaattgactttttaataccttgttatcatcaaaacttaaagtgataatgttaaacacattttgttccaa 32113  T
Q  130 ca 131  Q
    ||    
T  32114 ca 32115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 5035688 - 5035807
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaa 113  Q
    |||||||||| ||| ||||| |||| ||||| ||||||||| |||| |||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||    
T  5035688 aatttttagtctatggtcctgcacatttgaacaaatattaacatatccaattgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaa 5035787  T
Q  114 acacattttgttcgaacata 133  Q
    | ||||||||||| ||||||    
T  5035788 atacattttgttccaacata 5035807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 11572054 - 11571965
Alignment:
Q  37 cacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    |||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||| |||  | ||||||||||| ||||||||||    
T  11572054 cacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaactcaaagaggcaatgttaaactcattttgttc 11571965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 15304932 - 15305010
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac 95  Q
    ||||||||||| ||| | |||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  15304932 ttttagtttatggtcatgcacacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaac 15305010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 16307311 - 16307197
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac-taaaactgacaatgtt 111  Q
    ||||||||||| ||||||||| ||||||| || ||||||||  |||  ||||||| |||||||||| |||||||||||||||| ||||  ||  ||||||    
T  16307311 aaatttttagtctatagtcctgcacacttaaacaaatattagcatacccaattgagcttttaatactttgttatcatcaaaacttaaaggtggtaatgtt 16307212  T
Q  112 aaacacattttgttc 126  Q
    |||||||||||||||    
T  16307211 aaacacattttgttc 16307197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 18047693 - 18047575
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    |||||||| || ||| ||||| |||||||||| ||||||||  | |  |||||||  ||||||||||||||||||||||||||| ||  ||| |||||||    
T  18047693 aaattttttgtctatggtcctgcacacttgaacaaatattagcaaaaccaattgacattttaataccttgttatcatcaaaacttaaggtgaaaatgtta 18047594  T
Q  113 aacacattttgttcgaaca 131  Q
    |||||||||||||| ||||    
T  18047593 aacacattttgttccaaca 18047575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 9065835 - 9065903
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaacta 97  Q
    ||||| |||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  9065835 gtcctgcacacttgaacaaatattaatatatccaattgatattttaataccttgttatcatcaaaacta 9065903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 14304147 - 14304045
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||| |||||||||| ||||||||  |||||||||||| | |||||||||||||||||||||||||||||||  |  |||||||||| ||||||||||     
T  14304147 gtcctgcacacttgaacaaatattatcatattcaattgacatttttaataccttgttatcatcaaaactaaaa-gggtaatgttaaactcattttgttcc 14304049  T
Q  128 aaca 131  Q
    ||||    
T  14304048 aaca 14304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 18361417 - 18361302
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaactttt-aataccttgttatcatcaaaactaaaactgacaatgttaaac 115  Q
    ||||||| ||| |||||  ||||||||| ||||||||  |||| |||||||  |||| ||||||||||||||||||||||| ||  || |||||||||||    
T  18361417 ttttagtctatggtcctgaacacttgaacaaatattagcatatccaattgacttttttaataccttgttatcatcaaaacttaaggtggcaatgttaaac 18361318  T
Q  116 acattttgttcgaaca 131  Q
    ||||||||||| ||||    
T  18361317 acattttgttccaaca 18361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 24810954 - 24810875
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| |||  |||| |||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  24810954 ttttagtctatgatcctgcacacttgaacaaatattaacatatgcaattgaacttttattaccttgttatcatcaaaact 24810875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 23126270 - 23126383
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| |||| ||||||||||| || |||||  |||| |||||||||||||||||  ||||||||||| ||||| |||  | ||||||||||||    
T  23126270 ttttagtctatggtccgacacacttgaacaactattagcatatccaattgaacttttaatattttgttatcatc-aaactcaaagaggcaatgttaaaca 23126368  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  23126369 cattttgttccaaca 23126383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 1878027 - 1877933
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    ||||| |||||||||| ||||||||  |||| |||||||||||||||||||| ||||||||||||||| |||  | || |||||||| |||||||||    
T  1878027 gtcctgcacacttgaacaaatattagcatatccaattgaacttttaatacctagttatcatcaaaacttaaa--ggcattgttaaactcattttgtt 1877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 9763042 - 9763109
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| | ||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  9763042 gtcctgcacacttgaacagatattagcatatccaattgaacttttaataccttgttatcatcaaaact 9763109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 9803534 - 9803601
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||||||||| | ||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  9803534 gtcctacacacttgaacagatattagcatatctaattgaacttttaataccttgttatcatcaaaact 9803601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 16412399 - 16412518
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    ||||||| || ||| || || |||||||||| ||||||||  |||||||||||| | |||||||||||| |||||||||||||| ||  ||||| ||| |    
T  16412399 aattttttgtctatggttctgcacacttgaacaaatattagcatattcaattgatatttttaataccttattatcatcaaaacttaaggtgacattgtca 16412498  T
Q  113 aacacattttgttcgaacat 132  Q
    |||||||||| ||| |||||    
T  16412499 aacacatttttttccaacat 16412518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 3778326 - 3778260
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||| |||||||||    
T  3778326 tcctgcacacttgaacaaatattaacatatcaaattgaacttttaataccttgttataatcaaaact 3778260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9396710 - 9396619
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    |||||| |||||||  ||||||| ||| ||| | |||||||||| ||||||||  |||| ||||| ||||||||||||||||||||||||||||    
T  9396710 ttttaagacataaa--ttttagtctatggtcatgcacacttgaacaaatattagcatatccaattcaacttttaataccttgttatcatcaaaa 9396619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 14114398 - 14114528
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaa 100  Q
    ||||||||| || || ||||||| |||  || | |||| ||||| ||||||||  |||| |||||||||||||||||| || |||||||||||| | ||     
T  14114398 ttttaaaacttataaattttagtatatgatcatgcacatttgaacaaatattatcatatccaattgaacttttaatacgtttttatcatcaaaatttaag 14114497  T
Q  101 ctgacaatgttaaacacattttgttcgaaca 131  Q
     ||||||||||||| | ||||||||| ||||    
T  14114498 gtgacaatgttaaaaatattttgttccaaca 14114528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 14424048 - 14424178
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaa 100  Q
    ||||||||| || || ||||||| |||  || | |||| ||||| ||||||||  |||| |||||||||||||||||| || |||||||||||| | ||     
T  14424048 ttttaaaacttataaattttagtatatgatcatgcacatttgaacaaatattatcatatccaattgaacttttaatacgtttttatcatcaaaatttaag 14424147  T
Q  101 ctgacaatgttaaacacattttgttcgaaca 131  Q
     ||||||||||||| | ||||||||| ||||    
T  14424148 gtgacaatgttaaaaatattttgttccaaca 14424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 20598604 - 20598670
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| ||||||||| |||| |||||||| |||||||||||| ||||||||||||||    
T  20598604 tcctgcacacttgaacaaatattaacatatccaattgaaattttaataccttattatcatcaaaact 20598670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 7487642 - 7487539
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| |||||||| ||||| |||||||  | ||||||||||||||||||||||||||| |||  |  |||||||||| ||||||||||    
T  7487642 gtcctgcacacttgaacaaatattagtatatccaattgacaatttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaactcattttgttc 7487544  T
Q  127 gaaca 131  Q
     ||||    
T  7487543 caaca 7487539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 12174103 - 12174019
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| || |||||||||| ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  12174103 aattttttgtctatagtcctatacacttgaacaaatattagcatatccaattgactatttttaataccttgttatcatcaaaact 12174019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 4550018 - 4550101
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||||||| ||| ||| | ||||||| || ||||||||  |||||| |||||||||||||||| |||||||||| ||||||    
T  4550018 aaatttttagtctatggtcatgcacacttaaacaaatattagcatattcgattgaacttttaatactttgttatcattaaaact 4550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12222266 - 12222175
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaa 92  Q
    |||||| ||||| || ||||||| ||| ||| | |||||||||| ||||| ||  |||| ||||| ||||||||||||||||||||||||||    
T  12222266 ttttaagacatataaattttagtctatggtcatgcacacttgaacaaatactagcatatccaattaaacttttaataccttgttatcatcaa 12222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 12366507 - 12366445
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  |||||||||||||||||||||||||||||    
T  12366507 acacttgaacaaatattagcatattcaattgacaacttttaataccttgttatcatcaaaact 12366445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 16813254 - 16813333
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||| || || ||| |||||| ||||||||  |||||||||||||||| |||||| |||||||||||||||||    
T  16813254 ttttagtctatggtgctgcactcttgaacaaatattagcatattcaattgaacttgtaatacattgttatcatcaaaact 16813333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 16307499 - 16307397
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||| ||||| ||||||||  |||| ||||| |  || |||||||||||||||||||||||| ||  ||  ||||||||||||||||||||| |    
T  16307499 gtcctgcacatttgaacaaatattagcatatccaattaacattgtaataccttgttatcatcaaaacttaagttggtaatgttaaacacattttgttcca 16307400  T
Q  129 aca 131  Q
    |||    
T  16307399 aca 16307397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 9063943 - 9063854
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacat 119  Q
    ||||||||| ||||| ||||||||  |||| |||||||  |||||||||||||||||||| |||||| ||  ||  ||||||||||||||    
T  9063943 tcctacacatttgaacaaatattatcatatccaattgacattttaataccttgttatcattaaaacttaaggtggtaatgttaaacacat 9063854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 9098023 - 9097897
Alignment:
Q  8 acataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgac 105  Q
    |||| |||||||| || ||| ||||| |||| ||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||  ||  |      
T  9098023 acattaaattttt-gtctatggtcctgcacagttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctaaagggt 9097925  T
Q  106 aatgttaaacacattttgttcgaacata 133  Q
    | ||||||||||||||||||| ||||||    
T  9097924 agtgttaaacacattttgttccaacata 9097897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15088866 - 15088952
Alignment:
Q  11 taaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaac--ttttaataccttgttatcatcaaaact 96  Q
    |||||||||| || ||| ||||| |||||||||| ||||||||  |||| ||||||||   |||||||||||||||||||||||||||    
T  15088866 taaaattttt-gtctatggtcctccacacttgaacaaatattagcatatccaattgaaaatttttaataccttgttatcatcaaaact 15088952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 2913378 - 2913316
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  2913378 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 2913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 5000611 - 5000513
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   || ||  ||||||||||||||||||||| ||||    
T  5000611 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaatggtaatgttaaacacattttgttccaaca 5000513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 9069974 - 9070036
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  9069974 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 9070036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 10882930 - 10882831
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacata 133  Q
    ||||||||| ||||||||  |||| ||||||| | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| ||||||    
T  10882930 acacttgaacaaatattagcatatccaattgacaattttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacata 10882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 13172162 - 13172064
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  |||| |||||||  ||||  ||||||||||||||||||||||| ||| ||  | ||| ||||||||||||||| ||||    
T  13172162 cacacttgaacaaatattagcatatccaattgacattttttaataccttgttatcatcaaaactcaaagtggtattgtcaaacacattttgttccaaca 13172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 33691483 - 33691421
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| |||| |||||||  | |||||||||||||||||||||||||||    
T  33691483 acacttgaacaaatattaacatatccaattgacaatttttaataccttgttatcatcaaaact 33691421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 4494867 - 4494936
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  4494867 gtcctatacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 4494936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 5826357 - 5826430
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||| |||| |||||||  | ||||||||| |||||||||||||||||    
T  5826357 tatagtcctgtacacttgaacaaatattaacatatccaattgacaatttttaatactttgttatcatcaaaact 5826430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 11016321 - 11016415
Alignment:
Q  2 tttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| ||||| || ||||||| ||| ||||| ||| ||| || ||||||||  |||| ||||| ||||||||||||||| ||||||| ||||||    
T  11016321 tttaagacatataaattttagtctatggtcctgcacgcttaaacaaatattagcatatccaattaaacttttaataccttattatcattaaaact 11016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 14426903 - 14426976
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  14426903 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 14426976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 16422890 - 16422960
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatc 87  Q
    ||||||| ||| ||| | || ||||||| ||||| ||  ||||||||||||||||||||||||||||||||    
T  16422890 ttttagtctatggtcttgcatacttgaacaaatactagcatattcaattgaacttttaataccttgttatc 16422960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 30944126 - 30944053
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  30944126 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 30944053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 30945159 - 30945086
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||| ||||| ||||||||| || |||||||||  | |||||||||||||||||||||||||||    
T  30945159 tatagtcctgtacatttgaacaaatattaacatgttcaattgacaatttttaataccttgttatcatcaaaact 30945086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 13692741 - 13692841
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  13692741 acacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaacat 13692840  T
Q  133 a 133  Q
    |    
T  13692841 a 13692841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 13730467 - 13730367
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  13730467 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaacat 13730368  T
Q  133 a 133  Q
    |    
T  13730367 a 13730367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 16316333 - 16316241
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgtt 125  Q
    ||||||||| ||||||||  ||||  ||||||  |||||||||||||||||||||||||||||   ||  || ||||||||||||||||||||    
T  16316333 acacttgaacaaatattagcatatctaattgacaacttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgtt 16316241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 39284369 - 39284306
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||| ||||| ||||||||  |||| |||||||  |||||||||||||||||||||||||||||    
T  39284369 cacatttgaacaaatattagcatatccaattgacaacttttaataccttgttatcatcaaaact 39284306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 41842027 - 41841963
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaa-aactgacaatgttaaacacattttgttcgaacata 133  Q
    |||||||||||||||||||| ||||||   ||| || ||||||||||||||||||||| ||||||    
T  41842027 ttttaataccttgttatcataaaaactctcaacagataatgttaaacacattttgttccaacata 41841963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 44467451 - 44467550
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactga-caatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   |  ||  ||||||||||||||||||||| |||||    
T  44467451 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactcttaaagagtaatgttaaacacattttgttccaacat 44467550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 9709591 - 9709529
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  9709591 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 9709529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13137681 - 13137619
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| |||||||| ||||| |||| ||  | |||||||||||||||||||||||||||    
T  13137681 acacttgaacaaatattagtatatccaatagacaatttttaataccttgttatcatcaaaact 13137619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13260381 - 13260319
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||  |||| |||||||  | |||||||||| ||||||||||||||||    
T  13260381 acacttgaaaaaatattagcatatccaattgataatttttaataccatgttatcatcaaaact 13260319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 13303222 - 13303321
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttcgaacata 133  Q
    ||||||||| ||||||||  |||| ||||||| | |||||||||||| ||||||||||||| |  ||  |  ||||||||||||||||||||| ||||||    
T  13303222 acacttgaacaaatattagcatatccaattgacaattttaataccttattatcatcaaaactttcaaagggtaatgttaaacacattttgttccaacata 13303321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 19417579 - 19417646
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| ||||| | |||||| || ||||||||||||||||||    
T  19417579 gtcctgcacacttgaataaatattagcatatccaattaatcttttattatcttgttatcatcaaaact 19417646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 22577777 - 22577715
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  22577777 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 22577715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 28409435 - 28409497
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  28409435 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 28409497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 30026292 - 30026354
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  30026292 acacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaact 30026354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 48236703 - 48236632
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||   |||||||||||||||||| |||||||    
T  48236703 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttaataccttgttatcagcaaaact 48236632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 13880990 - 13881095
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | ||||| || ||||||||||| ||||||  ||  |  |||||||||||||||||||||    
T  13880990 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttagtatcttgttatcattaaaactctaaaggttaatgttaaacacattttgttc 13881089  T
Q  127 gaacat 132  Q
     |||||    
T  13881090 caacat 13881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 19236782 - 19236709
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| |||||||||| ||||||||  |||| ||| |||  | |||||||||||||||||| ||||||||    
T  19236782 tatagtcctgcacacttgaacaaatattagcatatccaaatgacaatttttaataccttgttatcgtcaaaact 19236709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 32264491 - 32264418
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  32264491 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 32264418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 5686095 - 5686124
Alignment:
Q  67 aacttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||||||||||||||    
T  5686095 aacttttaataccttgttatcatcaaaact 5686124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 5738892 - 5738921
Alignment:
Q  67 aacttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||||||||||||||    
T  5738892 aacttttaataccttgttatcatcaaaact 5738921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 15870879 - 15870818
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||   ||| ||||| ||||||||||||||| ||||||||||||||    
T  15870879 cacacttgactaaatattagcttatccaatttaacttttaataccttcttatcatcaaaact 15870818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 2265289 - 2265226
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  2265289 cacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 2265226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 11086763 - 11086700
Alignment:
Q  36 acacttgaaaaaatattaata-tattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  | |||||||||||  | |||||||||||||||||||||||||||    
T  11086763 acacttgaacaaatattagcaatattcaattgacaaattttaataccttgttatcatcaaaact 11086700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 48062585 - 48062530
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcat 89  Q
    ||||||||| ||||||||| |||||||||||  || ||||||||| ||||||||||    
T  48062585 acacttgaacaaatattaacatattcaattgacaatttttaatactttgttatcat 48062530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 14758649 - 14758743
Alignment:
Q  2 tttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| ||||| || ||||||| ||| ||||| |||||||||| ||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  14758649 tttaatacatataaattttagtctatggtccttcacacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatcaaaact 14758743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 24399049 - 24399151
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||  |||| ||||| |  ||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||| |    
T  24399049 gtcctgcacacttgaacaaatattagcatatccaattcactttttaataccttgttatcatcaaaacttaaggtgataatgttaaacacattttgttcca 24399148  T
Q  129 aca 131  Q
    |||    
T  24399149 aca 24399151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 15477581 - 15477486
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||| |||   ||| |||||||| |||||||||| ||||    
T  15477581 cacacttgaacaaatattagcatattcaattgaa-ttttaataccttgttatcatcaaaactcaaaaaaacattgttaaactcattttgttccaaca 15477486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 25596061 - 25596157
Alignment:
Q  37 cacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacata 133  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||  ||||||||||||| ||  || ||||||||| |||||||| ||| ||||||    
T  25596061 cacttgaacaaatattaagatatgcaattgaacttttaataccttactatcatcaaaacttaaggtggcaatgttaagcacattttattccaacata 25596157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 15552308 - 15552422
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| |||||  | ||||||| ||||||||  ||||||||||||||||||||||  ||||| |||||||| |||||  || |||||| |||||    
T  15552308 ttttagtctatggtcctgtatacttgaacaaatattagcatattcaattgaacttttaatatattgttgtcatcaaacctaaaggtggcaatgtcaaaca 15552407  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  15552408 cattttgttccaaca 15552422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 19473206 - 19473307
Alignment:
Q  32 ctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    ||||||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||  ||  || ||||||||||||||||||||| ||    
T  19473206 ctacacacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaactctaaaggataatgttaaacacattttgttccaa 19473305  T
Q  130 ca 131  Q
    ||    
T  19473306 ca 19473307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 20462642 - 20462751
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| |||  |||||||||| |||| ||||||||  |||| ||||| ||||||||||| |||||||||||||||||| |||  | || ||||||| |    
T  20462642 ttttagtctatgatcctacacacatgaacaaatattagcatatccaattcaacttttaataacttgttatcatcaaaactcaaagaggcattgttaaata 20462741  T
Q  117 cattttgttc 126  Q
    ||||||||||    
T  20462742 cattttgttc 20462751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 31719466 - 31719405
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  31719466 cacacttgaacaaatattaacatattcaattgaacttttaatatcttattatcatcaaaact 31719405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15542284 - 15542344
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  15542284 acacttgaacaaatattagaatatccaattgaacttttaataccttgttatcatcaaaact 15542344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 12715198 - 12715081
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaactaaaactgacaatgttaaa 114  Q
    |||| |||||| |||||  ||||||||| |||||||||||||| ||||||  || |||||||| ||||||||||||||||||   |  || |||||||||    
T  12715198 tttttgtttatggtcctgtacacttgaacaaatattaatatatccaattgacaatttttaatatcttgttatcatcaaaactctcaaggataatgttaaa 12715099  T
Q  115 cacattttgttcgaacat 132  Q
    |||||||| ||| |||||    
T  12715098 cacattttattccaacat 12715081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 25592927 - 25593029
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    |||| |||||||||| ||||||||  |||| ||||||| | ||||||||||||||||||||||||||| ||| |  || ||| ||||||||||||||| |    
T  25592927 tcctgcacacttgaacaaatattagcatatccaattgatatttttaataccttgttatcatcaaaactcaaagtagcattgtcaaacacattttgttcca 25593026  T
Q  129 aca 131  Q
    |||    
T  25593027 aca 25593029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 26186064 - 26186178
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||||| |||||||||| ||||||||  |||| |||||||   ||| |||||||||||||||||||||| ||  |  | ||||||||||    
T  26186064 ttttagtctatggtcctgcacacttgaacaaatattagcatatccaattgactctttcataccttgttatcatcaaaacttaaggtcgcgatgttaaaca 26186163  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  26186164 cattttgttccaaca 26186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 31127133 - 31127031
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||| ||  ||||  ||||||  ||||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||| |    
T  31127133 gtcctgcacacttgaacaaatactagcatatcgaattgactttttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttcca 31127034  T
Q  129 aca 131  Q
    |||    
T  31127033 aca 31127031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 12394831 - 12394910
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||| ||||| |||||||||| ||||||||| ||||  |||||| | |||||||| |||||||||||||||||    
T  12394831 ttttagtctatggtcctgcacacttgaacaaatattaacatatctaattgatcatttaatactttgttatcatcaaaact 12394910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 10704339 - 10704237
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| || |||||  |||||||||||   ||||||||| ||||||||||||||||| ||  ||  |||||||||||||| |||||| |    
T  10704339 gtcctgcacacttgaataagtattagcatattcaattggcattttaatactttgttatcatcaaaacttaaggtggtaatgttaaacacatattgttcca 10704240  T
Q  129 aca 131  Q
    |||    
T  10704239 aca 10704237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 12348565 - 12348626
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||||||||||||||||||||| |||  || ||||||||||||||||||||| |||||    
T  12348565 ttttaataccttgttatcatcaaaactcaaa-ggataatgttaaacacattttgttccaacat 12348626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 20462273 - 20462387
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| |||  |||| |||||||||| |||||||| ||||| ||||  ||||||||| | ||||||||| |||||||| |||  | || ||||||| |    
T  20462273 ttttagtctatgatcctgcacacttgaacaaatattagtatatccaatataacttttaacatcttgttatcttcaaaactcaaaggggcattgttaaata 20462372  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  20462373 cattttgttccaaca 20462387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 23005797 - 23005692
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgtt 125  Q
    ||||| |||||||||| ||||||||  ||||||||| ||  ||||  |||||||||||||||||||||| ||||  ||  ||||||||||||||||||||    
T  23005797 gtcctgcacacttgaacaaatattagcatattcaatagacattttttaataccttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgtt 23005698  T
Q  126 cgaaca 131  Q
    | ||||    
T  23005697 ccaaca 23005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 23782569 - 23782674
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgtt 125  Q
    ||||| |||||||||| ||||||||  ||||||||| ||  ||||  |||||||||||||||||||||| ||||  ||  ||||||||||||||||||||    
T  23782569 gtcctgcacacttgaacaaatattagcatattcaatagacattttttaataccttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgtt 23782668  T
Q  126 cgaaca 131  Q
    | ||||    
T  23782669 ccaaca 23782674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 19086555 - 19086655
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||||||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  19086555 acacttgaaaaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 19086654  T
Q  133 a 133  Q
    |    
T  19086655 a 19086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 24718504 - 24718411
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaactttt-aataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttc 126  Q
    |||||||||| ||||||||| |||| |||||||  |||| |||||||| ||||||||||||| ||||  ||| ||||||||| |||||||||||    
T  24718504 cacacttgaagaaatattaacatatccaattgacttttttaataccttattatcatcaaaacttaaaggtgataatgttaaatacattttgttc 24718411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 16742586 - 16742665
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||||||| || || |||| ||||| ||||||||  ||||  |||||||||| ||||| ||||||||||||||||||    
T  16742586 ttttagtttatggttctgcacatttgaacaaatattagcatataaaattgaacttctaatatcttgttatcatcaaaact 16742665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 19626266 - 19626328
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacata 133  Q
    ||||||||||||||||||||||||||| |||  |  ||||||||||||||||||||| ||||||    
T  19626266 ttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacattttgttccaacata 19626328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 22802529 - 22802591
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||||||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  22802529 acacttgaaaaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 22802591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 23231557 - 23231640
Alignment:
Q  46 aaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    ||||||||  |||| |||||||  ||||||||||||||||||||||||| | ||  ||  ||| ||||||||||||||||||||    
T  23231557 aaatattagcatatccaattgactttttaataccttgttatcatcaaaatttaaggtgctaatattaaacacattttgttcgaa 23231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 13145468 - 13145570
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||  |||| |||||||  |||| ||| ||||||| |||||||||| ||  ||  ||||||||||||| ||||||| |    
T  13145468 gtcctgcacacttgaataaatattagcatatccaattgactttttgatatcttgttaccatcaaaacttaaggtggtaatgttaaacacagtttgttcca 13145567  T
Q  129 aca 131  Q
    |||    
T  13145568 aca 13145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 15955081 - 15955154
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  15955081 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 15955154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 15987592 - 15987661
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  15987592 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 15987661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 24728303 - 24728205
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaac-tgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  |||| ||||| | | ||||||||||||||||| || |||||| |||  ||| ||||||||||||||||||||| ||||    
T  24728303 cacacttgaagaaatattagcatatccaattaacatttttaataccttgttattatgaaaacttaaaggtgataatgttaaacacattttgttccaaca 24728205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 13602560 - 13602621
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||| | |||||||||||||||||||||||||||    
T  13602560 acacttgaacaaatattagcatatccaattgacaattttaataccttgttatcatcaaaact 13602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 17868155 - 17868216
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||  |||| ||||| |  |||||||||||||||||||||||||||    
T  17868155 cacacttgaacaaatattagcatatccaatttacattttaataccttgttatcatcaaaact 17868216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 17877938 - 17877999
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||  |||| ||||| |  |||||||||||||||||||||||||||    
T  17877938 cacacttgaacaaatattagcatatccaatttacattttaataccttgttatcatcaaaact 17877999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 3680880 - 3680942
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||| ||||||||||||||||||    
T  3680880 acacttgaacaaatattagcatattcaattgacaatttttaatatcttgttatcatcaaaact 3680942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 9718248 - 9718310
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  9718248 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 9718310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 23298361 - 23298438
Alignment:
Q  46 aaatattaatatattcaattgaa--cttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacatttt 122  Q
    ||||||||  ||||||||||||   |||||||||||||||||||||||||||| |||  |  |||||||||||||||||    
T  23298361 aaatattagcatattcaattgacatcttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacatttt 23298438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 26971973 - 26971851
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaa 113  Q
    |||| |||||| |||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||   ||  |  ||||||||    
T  26971973 tttttgtttatggtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaactcttaaaggctaatgttaa 26971874  T
Q  114 acacattttgttcgaacatactg 136  Q
    ||||||||||||| |||| ||||    
T  26971873 acacattttgttccaacaaactg 26971851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 17928208 - 17928304
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | ||||| |||||||||||||| |||||| |||  |  ||||||||||||||||||||| ||||    
T  17928208 acacttgaacaaatattagcatatccaattgacaatttttattaccttgttatcataaaaactcaaagggt-aatgttaaacacattttgttccaaca 17928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 7812443 - 7812504
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| |||||||||| |||||| |||  |  ||||||||||||||||||||| ||||    
T  7812443 ttttaatactttgttatcattaaaactcaaaagggtaatgttaaacacattttgttccaaca 7812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 18171732 - 18171675
Alignment:
Q  70 ttttaataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttc 126  Q
    |||||||||||||||||||| ||||| ||||  ||  |||||||||||||||||||||    
T  18171732 ttttaataccttgttatcataaaaacttaaaggtggtaatgttaaacacattttgttc 18171675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 21235503 - 21235563
Alignment:
Q  38 acttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  21235503 acttgaataaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 21235563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 26943949 - 26944053
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| |||||||| |||||  ||||||  | ||||| | | |||||||||||||||||  ||  |  |||||||||||||||||||||    
T  26943949 gtcctgcacacttgaacaaatattagtatatcaaattgacaatttttattgcattgttatcatcaaaactctaaagggtaatgttaaacacattttgttc 26944048  T
Q  127 gaaca 131  Q
     ||||    
T  26944049 caaca 26944053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 9933288 - 9933260
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaa 98  Q
    |||||||||||||||||||||||||||||    
T  9933288 ttttaataccttgttatcatcaaaactaa 9933260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 16528927 - 16528990
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||  |||| |||||||  | |||||||||||| ||||||||||||||    
T  16528927 cacacttgaacaaatattagcatatccaattgacaatttttaataccttattatcatcaaaact 16528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 27989147 - 27989195
Alignment:
Q  46 aaatattaatatattcaattgaacttttaataccttgttatcatcaaaa 94  Q
    ||||||||| |||| ||||||| |||||||||| ||| |||||||||||    
T  27989147 aaatattaacatatccaattgatcttttaatacattgctatcatcaaaa 27989195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 34451425 - 34451366
Alignment:
Q  39 cttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  34451425 cttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 34451366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 16478443 - 16478347
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  |||| |||||||||||||||||||||||||||||| || || ||  || |||||||||||||||||||||| ||||    
T  16478443 cacacttgaacaaatattagcatatccaattgaacttttaataccttgttatcatctaagcttaaggtggcaatgttaaacacattttgttccaaca 16478347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 31359649 - 31359763
Alignment:
Q  20 tagtttatagtcctacacacttgaaaaaatattaatatattcaattgaactttt-aataccttgttatcatcaaaactaaaactgacaatgttaaacaca 118  Q
    |||| ||| ||||| ||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||  | || |||||||| ||    
T  31359649 tagtctatggtcctgcacacgtgaacaaatattaacatattcaattgaactttttaataccttgttatcatcaaaattcaaagaggcattgttaaactca 31359748  T
Q  119 ttttgttcgaacata 133  Q
    |||||||| ||||||    
T  31359749 ttttgttccaacata 31359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 2819036 - 2818940
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||| |||| |||||| ||||||||||  ||||||||||||||||| |||  | |||||||||||| ||||||||| ||||    
T  2819036 cacacttgaacaaatattaacatatccaattggacttttaatattttgttatcatcaaaactcaaagaggcaatgttaaacatattttgttccaaca 2818940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 2327105 - 2327021
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    ||||||| || |||||||||| ||||||||| ||||||||  |||||||||||  || |||||||||||||||||||||||||||    
T  2327105 aattttttgtctatagtcctagacacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 2327021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 21682927 - 21682815
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttt----taataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    ||||||| ||| ||||||||||||| || ||||||||  |||| ||||||| ||||    |||||| ||||||||||||||||| ||  |||||||||||    
T  21682927 ttttagtctatggtcctacacactttaacaaatattagcatatccaattga-ctttataataatactttgttatcatcaaaacttaaggtgacaatgtta 21682829  T
Q  113 aacacattttgttc 126  Q
    ||||||||||||||    
T  21682828 aacacattttgttc 21682815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 18896281 - 18896162
Alignment:
Q  12 aaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatg 109  Q
    ||||||||| || ||| ||||| ||||||| || |||| |||  ||||||||||||  | ||||||||||||||||||||||||||| |||  || ||||    
T  18896281 aaaattttt-gtctatggtcctgcacacttaaacaaattttagcatattcaattgacaatttttaataccttgttatcatcaaaactcaaa-ggataatg 18896184  T
Q  110 ttaaacacattttgttcgaaca 131  Q
    ||||||||||||||||| ||||    
T  18896183 ttaaacacattttgttccaaca 18896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 1090218 - 1090127
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    |||||||||| ||||||||  |||| ||||||| | |||||||||||||||||||||||| || |||  || |||||||||||||||||||||    
T  1090218 cacacttgaacaaatattagcatatccaattgacatttttaataccttgttatcatcaaagctcaaa-ggataatgttaaacacattttgttc 1090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 18129729 - 18129613
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||||| ||||||| || ||||||||  ||||  ||||||  |||||||||||| ||||||||||| || ||  ||  |||||||||||    
T  18129729 ttttagtctatggtcctgcacacttaaacaaatattagcatatctaattgacattttaataccttattatcatcaaagcttaaggtggtaatgttaaaca 18129630  T
Q  117 cattttgttcgaacata 133  Q
    |||||||||| ||||||    
T  18129629 cattttgttccaacata 18129613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 21617048 - 21617115
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||||||||||| |||||||||| ||||||| |||||||||    
T  21617048 gtcctgcacacttgaacaaatattagcatattcaattgatcttttaatactttgttattatcaaaact 21617115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 35896452 - 35896531
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||||| | |||||||||||||||| | | ||||| |||||||||||  |||||||||| || ||||||||||||||    
T  35896452 ttttagtttgtggtcctacacacttgaacatacattaacatattcaattgttcttttaatactttcttatcatcaaaact 35896531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 12613479 - 12613410
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    |||||||||||||||| |||||||| ||||| ||||||  || ||||||||||||||||| |||||||||    
T  12613479 gtcctacacacttgaacaaatattagtatatccaattgacaatttttaataccttgttattatcaaaact 12613410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 16870357 - 16870455
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||| |||| ||||||| | |||||||| ||||||||||||||||| ||||  | | |||| |||||||||||||||| ||||    
T  16870357 cacacttgaacaaatattaacatatccaattgacatttttaatatcttgttatcatcaaaacttaaaggtaataatggtaaacacattttgttccaaca 16870455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 24227666 - 24227598
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||| |||||||||| |||||||||||||| ||||| |  | |||||||||||||||||||||||||||    
T  24227666 tcctgcacacttgaacaaatattaatatatccaattaacaatttttaataccttgttatcatcaaaact 24227598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 48704604 - 48704701
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaac-ttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| ||||||||  |||||||||||||||||||||||||||   ||  || ||||||||||||||||||||| ||||    
T  48704604 acacttgaacaaatattagcatatccaattgaaaattttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 48704701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 2268932 - 2269030
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaac-taaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||| |  ||  || ||||||||||||||||||||| ||||    
T  2268932 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaacttttaaaggataatgttaaacacattttgttccaaca 2269030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 19227806 - 19227873
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgtt 84  Q
    ||||||||||| ||||| |||||||||| | ||||||||||||| |||||  |||||||||| |||||    
T  19227806 ttttagtttatggtcctgcacacttgaacatatattaatatatttaattgttcttttaatacattgtt 19227873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 26701828 - 26701759
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  26701828 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 26701759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 20909871 - 20909931
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||||||||||||||||||| |||  |  ||||||||||||||||||||| ||||    
T  20909871 ttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaacacattttgttccaaca 20909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 22201510 - 22201410
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||||||||||||  |||| |||||||  | |||||||||||| ||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  22201510 acacttgaaaaaatattagcatatccaattgacaatttttaatacctttttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 22201411  T
Q  133 a 133  Q
    |    
T  22201410 a 22201410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 23918120 - 23918153
Alignment:
Q  61 caattgaacttttaataccttgttatcatcaaaa 94  Q
    ||||||||||||||||||||||||||||||||||    
T  23918120 caattgaacttttaataccttgttatcatcaaaa 23918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 28492111 - 28492050
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| |||| ||||||| | |||||||| ||||||||||||||||||    
T  28492111 acacttgaacaaatattaacatatccaattgacaattttaatatcttgttatcatcaaaact 28492050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 18615313 - 18615381
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||||||||||||||| ||||||||  ||||  |||||| | ||||||||| |||||||||||||||||    
T  18615313 gtcctacacacttgaacaaatattagcatatctaattgacatttttaatacattgttatcatcaaaact 18615381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 25399739 - 25399799
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    ||||||||| || |||||  |||| |||||||||| ||||||| |||||||||||||||||    
T  25399739 acacttgaacaagtattagcatatccaattgaactcttaatactttgttatcatcaaaact 25399799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 36134578 - 36134641
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaacta 97  Q
    ||||||||| ||||||||| |||| |||||||  | ||||||||| ||||||||||||||||||    
T  36134578 acacttgaacaaatattaacatatccaattgacaatttttaatactttgttatcatcaaaacta 36134641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 10757808 - 10757870
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||| || ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  10757808 acactttaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 10757870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 16234987 - 16234925
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  16234987 acacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaact 16234925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 22154278 - 22154340
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||  || |||||||||||||||||||||||||||    
T  22154278 acacttgaataaatattagcatatccaattggcaatttttaataccttgttatcatcaaaact 22154340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 22464468 - 22464406
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  22464468 acacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaact 22464406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 23036193 - 23036131
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  23036193 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 23036131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 25448046 - 25447984
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  25448046 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 25447984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 30893466 - 30893528
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| | || |||||||  | |||||||||||||||||||||||||||    
T  30893466 acacttgaacaaatattaacaaatccaattgacaatttttaataccttgttatcatcaaaact 30893528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 38282987 - 38283049
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  38282987 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 38283049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 1578230 - 1578299
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaact 96  Q
    |||||| ||||||||| ||||||||  |||| |||||||  ||||  |||||||||||||||||||||||    
T  1578230 gtcctatacacttgaacaaatattagcatatccaattgacattttttaataccttgttatcatcaaaact 1578299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 2835083 - 2835156
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||| ||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  2835083 tatagtcctgtacacttgaacaaacattagcatatccaattgacaatttttaataccttgttatcatcaaaact 2835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 9659078 - 9659142
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga---acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||  |||| |||||||   | |||||||||||||||||||||||||||    
T  9659078 cacacttgaacaaatattagcatatccaattgacatatttttaataccttgttatcatcaaaact 9659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 17024656 - 17024602
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgt 124  Q
    |||||||||||||||||||||||||||  ||  |  |||||||||||||||||||    
T  17024656 ttttaataccttgttatcatcaaaactgtaaagggtaatgttaaacacattttgt 17024602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 18516843 - 18516773
Alignment:
Q  61 caattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||  ||||||||| ||||||||||||||| | ||| ||  |||||||||| |||||||||| ||||    
T  18516843 caattgacattttaatactttgttatcatcaaaagttaaagtggtaatgttaaactcattttgttccaaca 18516773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 19717909 - 19717970
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaac 95  Q
    ||||||||| ||||||||| |||| |||||||  | ||||||| ||||||||||||||||||    
T  19717909 acacttgaacaaatattaacatatccaattgacaatttttaattccttgttatcatcaaaac 19717970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 21134852 - 21134779
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| |||||||||  ||| |||||||  | ||||||||| |||||||||||||||||    
T  21134852 tatagtcctgtacacttgaacaaatattaacgtatccaattgacaatttttaatactttgttatcatcaaaact 21134779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 26279729 - 26279643
Alignment:
Q  40 ttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||| ||  |||||||||  |||||||||||| |||||||||||| | ||  ||  || ||||||||||||||||||    
T  26279729 ttgaacaaatattagtaatttcaattgactttttaataccttattatcatcaaaatttaagatggtaaagttaaacacattttgttc 26279643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 29216176 - 29216249
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||| ||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  29216176 tatagtcctgtacatttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 29216249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 33256029 - 33255968
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa 94  Q
    |||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||    
T  33256029 cacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaa 33255968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 33276201 - 33276140
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa 94  Q
    |||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||    
T  33276201 cacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaa 33276140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 46089374 - 46089447
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||| |||| |||||||  | ||||||||| || ||||||||||||||    
T  46089374 tatagtcctgtacacttgaacaaatattaacatatccaattgacaatttttaatactttattatcatcaaaact 46089447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 21191558 - 21191454
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||| ||||| ||||||||  |||| |||||||  | |||||||||||||||||| ||||||||  ||  |  ||||||| |||||||||||||    
T  21191558 gtcctgcacatttgaacaaatattagcatatccaattgacaatttttaataccttgttatcctcaaaactttaaagggtaatgttagacacattttgttc 21191459  T
Q  127 gaaca 131  Q
     ||||    
T  21191458 caaca 21191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 21984963 - 21985039
Alignment:
Q  22 gtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||| || ||||||||| |||||||| | ||| |||||||  | ||||||||| |||||||||||| ||||    
T  21984963 gtttatagtcatatacacttgaagaaatattattgtatccaattgacaatttttaatactttgttatcatcataact 21985039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 9347653 - 9347717
Alignment:
Q  61 caattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgtt 125  Q
    |||||||  ||||| ||||||||||||||||||||| ||  ||  ||||||||||| ||||||||    
T  9347653 caattgacattttagtaccttgttatcatcaaaacttaaggtggtaatgttaaacatattttgtt 9347717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10154459 - 10154552
Alignment:
Q  1 ttttaaaacataaaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||| || || |||| |||  |||| |||||||||| ||||||||  | || ||||||| ||||||||||  ||||||||||||||||    
T  10154459 ttttaagacatataaattgtagtctatgatcctgcacacttgaacaaatattagcaaatccaattgatcttttaatac--tgttatcatcaaaact 10154552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 3076 - 2962
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||||| | ||| | |||||||||| ||||||||  |||| |||||||||||||||||| ||||||| ||||||||| ||  | ||||||| |||||    
T  3076 ttttagtttttggtcttgcacacttgaacaaatattagcatatccaattgaacttttaatacattgttattatcaaaacttaaggtaacaatgtaaaaca 2977  T
Q  117 cattttgttcgaaca 131  Q
    |||||||||| ||||    
T  2976 cattttgttccaaca 2962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 7724 - 7826
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| ||||||| || ||||||||  |||| |||||||  ||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||| |    
T  7724 gtcctgcacacttaaacaaatattagcatatccaattgacattttaataccttgttatcatcaaaacttaagatgataatgttaaacacattttgttcca 7823  T
Q  129 aca 131  Q
    |||    
T  7824 aca 7826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 5736 - 5850
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaaca 116  Q
    ||||||| ||| ||||| |||| || || |||||||| ||| | |||||||| |||||||| |||||||||||||||||| ||  |||||||||||||||    
T  5736 ttttagtctatggtcctgcacaattaaataaatattagtatgtccaattgaaattttaatatcttgttatcatcaaaacttaaggtgacaatgttaaaca 5835  T
Q  117 cattttgttcgaaca 131  Q
    |||||| ||| ||||    
T  5836 cattttattccaaca 5850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 4813 - 4911
Alignment:
Q  26 atagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttg 123  Q
    |||||||| |||||||||| ||||||||  ||||  ||||||  | ||||||||||||||||| || |||||| |||  |  ||||||||||||||||||    
T  4813 atagtcctgcacacttgaacaaatattagcatatctaattgacaatttttaataccttgttattattaaaactcaaa-gggtaatgttaaacacattttg 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 8440 - 8536
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  |||| ||||| |||||||||||||||||||||||| ||||  ||  ||||||||||||||||||||| ||| ||||    
T  8440 cacacttgaacaaatattagcatatccaattaaacttttaataccttgttatcatccaaacataaggtgacaatgttaaacacattttattccaaca 8536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 602 - 500
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    |||| |||||||||| ||||||||  |||| |||||||  | ||||||||||||||||||||||||| ||  ||  ||||||||||||||||||||| ||    
T  602 tcctgcacacttgaacaaatattagcatatgcaattgacatattaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaa 503  T
Q  130 cat 132  Q
    |||    
T  502 cat 500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 59938 - 60034
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||| ||| ||  | | ||||||||||| ||||| ||||    
T  59938 acacttgaagaaatattaacatattcaattgacatttttaataccttgttatcatcaaaactcaaagtggtattattaaacacattatgttccaaca 60034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 1111 - 1230
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaactaaaactgacaatgtta 112  Q
    ||||||| || ||| || || |||||||||| ||||||||  |||||||||||| | |||||||||||| |||||||||||||| ||  ||||| ||| |    
T  1111 aattttttgtctatggttctgcacacttgaacaaatattagcatattcaattgatatttttaataccttattatcatcaaaacttaaggtgacattgtca 1210  T
Q  113 aacacattttgttcgaacat 132  Q
    |||||||||| ||| |||||    
T  1211 aacacatttttttccaacat 1230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 11602 - 11672
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatc 87  Q
    ||||||| ||| ||| | || ||||||| ||||| ||  ||||||||||||||||||||||||||||||||    
T  11602 ttttagtctatggtcttgcatacttgaacaaatactagcatattcaattgaacttttaataccttgttatc 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 116186 - 116288
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||  |||| |||||||| |||||||| |||||||||||||||||  ||| ||  || |||||| ||||||||||| |    
T  116186 gtcctgcacacttgaacaaatattagcatatccaattgaatttttaatatcttgttatcatcaaaacataaagtggtaacgttaaagacattttgttcca 116285  T
Q  129 aca 131  Q
    |||    
T  116286 aca 116288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 112579 - 112680
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    |||| |||||||||| ||||||||  |||| |||||||  ||||||||||||||||||||||||||  ||  ||  || |||||||||||||||||| ||    
T  112579 tcctgcacacttgaacaaatattagcatatccaattgactttttaataccttgttatcatcaaaacataaggtggtaacgttaaacacattttgttccaa 112678  T
Q  130 ca 131  Q
    ||    
T  112679 ca 112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 10122 - 10025
Alignment:
Q  35 cacacttgaaaaaatattaatatatt-caattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||| ||||||||  ||||| |||||||  ||||||||||||||||||||||||| | ||  ||  ||||||||||||||||||||| ||||    
T  10122 cacacttgaacaaatattagcatatttcaattgacattttaataccttgttatcatcaaaatttaaggtggtaatgttaaacacattttgttccaaca 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 9013 - 8912
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaa 129  Q
    |||| |||||||||| ||||||||  ||||  ||||||  ||||||||||||||||||||||||||  ||  ||  ||||||||||||||||||||| ||    
T  9013 tcctgcacacttgaacaaatattagcatatctaattgactttttaataccttgttatcatcaaaacataaggtggtaatgttaaacacattttgttccaa 8914  T
Q  130 ca 131  Q
    ||    
T  8913 ca 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 2350 - 2248
Alignment:
Q  30 tcctacacacttgaaaaaatattaatatattcaattgaactttt--aataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcg 127  Q
    ||||||||||||||| ||||||||  ||||||||||||  ||||  ||||||||||||||||||||||| |||  |  ||||||||| |||||||||||     
T  2350 tcctacacacttgaacaaatattagcatattcaattgacattttttaataccttgttatcatcaaaactcaaa-gggtaatgttaaatacattttgttcc 2252  T
Q  128 aaca 131  Q
    ||||    
T  2251 aaca 2248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 30201 - 30319
Alignment:
Q  14 aatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgtt 111  Q
    ||||||| || ||| |||||||||||||||| ||||||||   ||| |||||||  | ||||||||||||||||||||||||||| |||  |  ||||||    
T  30201 aattttttgtctatggtcctacacacttgaacaaatattagcgtatccaattgacaaattttaataccttgttatcatcaaaactcaaa-gggtaatgtt 30299  T
Q  112 aaacacattttgttcgaaca 131  Q
    ||||||||||| ||| ||||    
T  30300 aaacacattttcttccaaca 30319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 19180 - 19118
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  19180 acacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaact 19118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 98891 - 98819
Alignment:
Q  26 atagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  98891 atagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 98819  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 1616 - 1557
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac 95  Q
    |||| |||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  1616 acacgtgaacaaatattagcatattcaattgaacttttaatacattgttatcatcaaaac 1557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 25417 - 25351
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaac 95  Q
    ||||| |||||||||| ||||||||| |||   ||||||||| ||||||| ||||||||||||||||    
T  25417 gtcctgcacacttgaacaaatattaacatacctaattgaactattaatacattgttatcatcaaaac 25351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold1782
Description:

Target: scaffold1782; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 739 - 844
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||  ||  |  ||||||||||||||||| |||    
T  739 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctaaagggtaatgttaaacacattttattc 838  T
Q  127 gaacat 132  Q
     |||||    
T  839 caacat 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 731 - 669
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||| |||| |||||||  | |||||||||||||||||||||||||||    
T  731 acacttgaacaaatattaacatatccaattgacaatttttaataccttgttatcatcaaaact 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 1416 - 1314
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcga 128  Q
    ||||| |||||||||| ||||||||  |  |||||||||  |||||||| |||||||||||||||| | ||  ||  ||||||||||||||||||||| |    
T  1416 gtcctgcacacttgaacaaatattagcaatttcaattgatattttaatatcttgttatcatcaaaatttaaggtggtaatgttaaacacattttgttcca 1317  T
Q  129 aca 131  Q
    |||    
T  1316 aca 1314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 19420 - 19537
Alignment:
Q  17 ttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaa 113  Q
    |||| |||||| |||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  || ||||||||    
T  19420 tttttgtttatggtcctctacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaaggataatgttaa 19519  T
Q  114 acacattttgttcgaaca 131  Q
    ||||||||||||| ||||    
T  19520 acacattttgttccaaca 19537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 9946 - 10031
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||| || |||||||||  ||||||||| ||||||||  | || |||||||  | ||||||||| |||||||||||||||||    
T  9946 aaattttttgtctatagtcctgtacacttgaacaaatattagcacatccaattgataatttttaatactttgttatcatcaaaact 10031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 87300 - 87393
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaa-ctaaaactgacaatgttaaacacattttgttc 126  Q
    |||| ||||| ||||||||  |||| ||||||| | ||||||||||||||||||||||||| |||||  ||  |||||||||||||||||||||    
T  87300 cacagttgaacaaatattagcatatccaattgacatttttaataccttgttatcatcaaaacctaaaggtggtaatgttaaacacattttgttc 87393  T

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Target: scaffold0622 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 3035 - 3119
Alignment:
Q  13 aaatttttagtttatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||||||| || ||| ||| | |||||||||| ||||||||  |||| ||||||| | |||||||||||||||||||||||||||    
T  3035 aaattttttgtctatggtcttgcacacttgaagaaatattagcatatccaattgatatttttaataccttgttatcatcaaaact 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 1572 - 1511
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||| |||||||||||||||||| ||  ||  ||||||||||||||||||||| ||||    
T  1572 ttttaatatcttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 220633 - 220737
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttc 126  Q
    ||||||||||||| || ||||| ||  |||| ||||||| | |||||||||||||||||||||||||||   ||  |  |||||||||||||||||||||    
T  220633 gtcctacacacttaaacaaatactagcatatccaattgacaattttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttc 220732  T
Q  127 gaaca 131  Q
    |||||    
T  220733 gaaca 220737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 30578 - 30516
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaac--ttttaataccttgttatcatcaaaact 96  Q
    ||||||||| |||||||| ||||| ||||||||   |||||||||||||||||||||||||||    
T  30578 acacttgaacaaatattagtatatccaattgaatatttttaataccttgttatcatcaaaact 30516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 243925 - 243864
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    |||||||||||||||||||||||||||  ||  |  ||||||||||||||||||||| ||||    
T  243925 ttttaataccttgttatcatcaaaactctaaagggtaatgttaaacacattttgttccaaca 243864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 30625 - 30687
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  30625 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 30687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 10315 - 10376
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||||||||||||| |||||  ||  |  ||||||||||||||||||||| ||||    
T  10315 ttttaataccttgttatcatccaaactctaaaaggtaatgttaaacacattttgttccaaca 10376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 5908 - 5846
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  ||||||||||||  | |||||||||||||||||||||||||||    
T  5908 acacttgaacaaatattagcatattcaattgacaatttttaataccttgttatcatcaaaact 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 406 - 333
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  406 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 1496 - 1423
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  | ||||||| ||||||||| |||| |||||||  | ||||||||| |||||||||||||||||    
T  1496 tatagtcctgtatacttgaataaatattaacatatccaattgacaatttttaatactttgttatcatcaaaact 1423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 4660 - 4591
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||| ||||||||| ||||||||| |||| ||||| |  | |||||||||||||||||||||||||||    
T  4660 gtcctatacacttgaacaaatattaacatatccaattaacaatttttaataccttgttatcatcaaaact 4591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 5859 - 5918
Alignment:
Q  35 cacacttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaact 96  Q
    |||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||||||||||    
T  5859 cacacttgaataaatattaataaat--aaatgatcttttaataccttgttatcatcaaaact 5918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 25373 - 25300
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  25373 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 25300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 34527 - 34454
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  |||| |||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  34527 tatagtcctgtacacctgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 34454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 269168 - 269229
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||||||||||||||||||||| |||  |  ||||||||||||||||||||| |||||    
T  269168 ttttaataccttgttatcatcaaaactcaaa-ggttaatgttaaacacattttgttccaacat 269229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 12615 - 12676
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||| | |||||||||||||||||||||||||||    
T  12615 acacttgaacaaatattagcatatccaattgacaattttaataccttgttatcatcaaaact 12676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 1212 - 1110
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| |||||||| ||||| |||||||  | |||||||||||| |||||||| ||||| |||  |  |||||||||||||||||||||    
T  1212 gtcctgcacacttgaacaaatattagtatatccaattgacaatttttaatacctttttatcatc-aaactcaaa-gggtaatgttaaacacattttgttc 1115  T
Q  127 gaaca 131  Q
     ||||    
T  1114 caaca 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 3731 - 3645
Alignment:
Q  40 ttgaaaaaatattaatatattcaattgaacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||||||||||||  |||| |||||||  ||||| ||  ||||||||||||||||| ||  ||  ||||||||||||| |||||||    
T  3731 ttgaaaaaatattagcatatccaattgactttttattattttgttatcatcaaaacttaaggtggtaatgttaaacacagtttgttc 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 8301 - 8399
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaa--ctaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||  || ||| ||  ||||||||||||||||||||| ||||    
T  8301 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactcttaaagtg-taatgttaaacacattttgttccaaca 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 115911 - 115986
Alignment:
Q  23 tttatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||  ||||||||| ||||||||  | ||||||||||  | |||| ||||||||||||||||||||||    
T  115911 tttattgtcctgtacacttgaacaaatattagcaaattcaattgacaatttttcataccttgttatcatcaaaact 115986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 145267 - 145370
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | ||||||||| ||||||||||||||||| |||  |   ||||||||||||||||||||    
T  145267 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaatacattgttatcatcaaaactcaaa-gggtgatgttaaacacattttgttc 145365  T
Q  127 gaaca 131  Q
     ||||    
T  145366 caaca 145370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 10342 - 10441
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  10342 acacttgaacaaatattagcatatccaattgataatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1709 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 4 - 66
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  4 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 317 - 255
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  317 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 255  T

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Target: scaffold0426 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 14016 - 14078
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  14016 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 14078  T

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Target: scaffold0337 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15066 - 15128
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||   |||||||||||  | |||||||||||||||||||||||||||    
T  15066 acacttgaacaaatattagcgtattcaattgacaatttttaataccttgttatcatcaaaact 15128  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 36482 - 36420
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  36482 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 36420  T

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Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 42523 - 42585
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||    
T  42523 acacttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaact 42585  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 56862 - 56924
Alignment:
Q  36 acacttgaaaaaatattaatatattcaattgaac--ttttaataccttgttatcatcaaaact 96  Q
    ||||||||| ||||||||  |||| ||||||||   |||||||||||||||||||||||||||    
T  56862 acacttgaacaaatattagcatatccaattgaaagtttttaataccttgttatcatcaaaact 56924  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 6425 - 6352
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  6425 tatagtcctgtacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 6352  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 8669 - 8742
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  ||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  8669 tatagtcctgtacacttgaataaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 8742  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 159470 - 159539
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact 96  Q
    ||||| |||||||||| ||||||||  |||| |||||||  | ||||||||| |||||||||||||||||    
T  159470 gtcctgcacacttgaacaaatattagcatatccaattgacaatttttaatactttgttatcatcaaaact 159539  T

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Target: scaffold0747 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 3391 - 3420
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  3391 ttttaataccttgttatcatcaaaactaaa 3420  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 5394 - 5298
Alignment:
Q  39 cttgaaaaaatattaatatattcaattga--acttttaataccttgttatcatcaaaact-aaaactgacaatgttaaacacattttgttcgaacat 132  Q
    |||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||||||   ||  |  ||||||||||||||||||||| |||||    
T  5394 cttgaacaaatattagcatatccaattgacaatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 5298  T

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Target: scaffold0201 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 19446 - 19550
Alignment:
Q  29 gtcctacacacttgaaaaaatattaatatattcaattg--aacttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttc 126  Q
    |||||||||||||||| ||||||||  |||| ||||||  |  ||||||||| |||||||||| |||||| ||| ||  | ||| ||||||||||| |||    
T  19446 gtcctacacacttgaacaaatattagcatatccaattggcattttttaatactttgttatcataaaaactcaaagtggtattgtcaaacacattttcttc 19545  T
Q  127 gaaca 131  Q
     ||||    
T  19546 caaca 19550  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 41091 - 41152
Alignment:
Q  70 ttttaataccttgttatcatcaaaactaaaactgacaatgttaaacacattttgttcgaaca 131  Q
    ||||||||||||| |||||||||||||  ||  |  ||||||||||||||||||||| ||||    
T  41091 ttttaataccttgctatcatcaaaactctaaaggctaatgttaaacacattttgttccaaca 41152  T

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Target: scaffold0607 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 7310 - 7382
Alignment:
Q  25 tatagtcctacacacttgaaaaaatattaatatattcaattga-acttttaataccttgttatcatcaaaact 96  Q
    |||||||||  | ||||||| ||||||||  |||| ||||||| | ||||||||| |||||||||||||||||    
T  7310 tatagtcctgtaaacttgaacaaatattagcatatccaattgacaattttaatactttgttatcatcaaaact 7382  T

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