View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18159_high_25 (Length: 230)
Name: NF18159_high_25
Description: NF18159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18159_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 31364859 - 31364659
Alignment:
| Q |
16 |
cacaaaggtccatttacttttcttccaaccaatcaaatttgagttacgtacaactatcaatatttgtttgtttcgttatttgccgaatnnnnnnntagcc |
115 |
Q |
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| T |
31364859 |
cacaaaggtccatttacttttcttccaaccaatcaaatttgagttacgtacaactatcaatatttgtttgtttcgttatttgccgaatccccccctagcc |
31364760 |
T |
|
| Q |
116 |
agctcaagattaaatctatacaaatatagagggacacttgaaactgaagaaagatcgaagaaaattcgctataaaaaagtcatcaaagaagttatattca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
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| T |
31364759 |
agctcaagattaaatctatacaaatatagagggacacttgaaactgaagaaagatcgaagaaaattcgctataaaaaagtcaacaaagaatttatattca |
31364660 |
T |
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| Q |
216 |
t |
216 |
Q |
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| T |
31364659 |
t |
31364659 |
T |
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