View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18160_low_10 (Length: 201)
Name: NF18160_low_10
Description: NF18160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18160_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 2e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 48288491 - 48288673
Alignment:
| Q |
1 |
tccttgacatggatcaaattcaattcattttatgagtatatatgtgtagtttgtgatatatgtaagttcattttatgagcaatgtccttctcttggtcca |
100 |
Q |
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| T |
48288491 |
tccttgacatggatcaaatgcaa---attttatgagtatatatgtgtagtttgtgatatatgtaagttcattttatgagcaatgtccttctcttggtcca |
48288587 |
T |
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| Q |
101 |
aaaagaaaattgacattgtcaattacttcaaattagtctattnnnnnnntaatgttgtaaatcgtcataatcctagtaggcctttg |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
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| T |
48288588 |
aaaagaaaattgacattgtcaattacttcaaattagtctattaagaaaataatgttgtaaatcgtcataatcctggtaggcctttg |
48288673 |
T |
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