View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18160_low_5 (Length: 325)

Name: NF18160_low_5
Description: NF18160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18160_low_5
NF18160_low_5
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-310)||(12237-12545)
[»] chr6 (25 HSPs)
chr6 (1-310)||(29614534-29614843)
chr6 (1-310)||(12167723-12168033)
chr6 (1-310)||(19286632-19286942)
chr6 (1-310)||(19786254-19786564)
chr6 (1-310)||(19877816-19878126)
chr6 (1-310)||(19883592-19883902)
chr6 (1-303)||(34640380-34640684)
chr6 (1-303)||(34647054-34647358)
chr6 (1-302)||(25470096-25470399)
chr6 (1-298)||(21364876-21365173)
chr6 (1-298)||(23968858-23969155)
chr6 (122-298)||(20008346-20008522)
chr6 (113-287)||(18799911-18800085)
chr6 (65-287)||(9186918-9187140)
chr6 (157-287)||(24513253-24513383)
chr6 (113-261)||(21565627-21565774)
chr6 (1-90)||(20008493-20008582)
chr6 (209-287)||(19471745-19471823)
chr6 (1-103)||(21565723-21565814)
chr6 (1-48)||(18799871-18799918)
chr6 (170-245)||(19300199-19300274)
chr6 (56-109)||(24513370-24513423)
chr6 (219-287)||(25396750-25396818)
chr6 (170-276)||(31251951-31252057)
chr6 (1-82)||(19471888-19471969)
[»] chr7 (33 HSPs)
chr7 (1-310)||(13006792-13007102)
chr7 (1-310)||(13743068-13743378)
chr7 (1-310)||(13123302-13123611)
chr7 (1-302)||(12591037-12591339)
chr7 (1-310)||(12710231-12710540)
chr7 (1-276)||(3857784-3858060)
chr7 (113-310)||(11389734-11389931)
chr7 (122-310)||(11383257-11383445)
chr7 (122-298)||(2966447-2966623)
chr7 (142-298)||(2464865-2465021)
chr7 (137-280)||(29181525-29181668)
chr7 (172-287)||(21231369-21231484)
chr7 (122-280)||(20906876-20907022)
chr7 (1-90)||(2464785-2464874)
chr7 (1-90)||(2966387-2966476)
chr7 (120-245)||(16676792-16676917)
chr7 (120-245)||(17651028-17651153)
chr7 (1-90)||(29181654-29181743)
chr7 (209-287)||(46625527-46625605)
chr7 (1-90)||(16090506-16090595)
chr7 (1-131)||(16676745-16676864)
chr7 (1-131)||(17650981-17651100)
chr7 (120-287)||(20311461-20311628)
chr7 (1-90)||(20311597-20311686)
chr7 (1-90)||(20906993-20907082)
chr7 (172-287)||(13664462-13664577)
chr7 (253-298)||(16676905-16676951)
chr7 (253-298)||(17651141-17651187)
chr7 (124-174)||(16090568-16090618)
chr7 (56-100)||(21231532-21231576)
chr7 (1-48)||(11389924-11389971)
chr7 (57-131)||(13678940-13679014)
chr7 (209-243)||(13679081-13679115)
[»] chr2 (18 HSPs)
chr2 (1-310)||(5706409-5706719)
chr2 (1-245)||(26583208-26583452)
chr2 (122-298)||(10057-10233)
chr2 (1-303)||(23878370-23878673)
chr2 (113-298)||(23101859-23102045)
chr2 (113-261)||(23089470-23089617)
chr2 (122-245)||(25181352-25181475)
chr2 (1-90)||(9997-10086)
chr2 (56-276)||(23264557-23264777)
chr2 (2-90)||(25181446-25181534)
chr2 (213-287)||(23063256-23063330)
chr2 (1-90)||(29281417-29281506)
chr2 (137-183)||(29281492-29281538)
chr2 (1-103)||(23089566-23089657)
chr2 (224-287)||(24661159-24661222)
chr2 (1-103)||(23101994-23102085)
chr2 (252-298)||(25181319-25181365)
chr2 (162-194)||(20627854-20627886)
[»] chr8 (10 HSPs)
chr8 (1-310)||(17053951-17054261)
chr8 (1-310)||(23865973-23866282)
chr8 (56-310)||(14056949-14057204)
chr8 (122-298)||(24321069-24321245)
chr8 (139-287)||(25111474-25111622)
chr8 (153-310)||(18613783-18613943)
chr8 (1-90)||(24321216-24321305)
chr8 (56-103)||(25111452-25111499)
chr8 (219-287)||(21839979-21840047)
chr8 (219-287)||(21931275-21931343)
[»] chr3 (21 HSPs)
chr3 (1-310)||(24192313-24192623)
chr3 (1-310)||(41455483-41455795)
chr3 (59-302)||(10389840-10390083)
chr3 (59-302)||(10414929-10415172)
chr3 (59-302)||(10421599-10421842)
chr3 (113-310)||(16801852-16802050)
chr3 (122-298)||(17131211-17131388)
chr3 (181-302)||(24934222-24934343)
chr3 (113-298)||(12033843-12034028)
chr3 (113-261)||(55499561-55499709)
chr3 (122-278)||(14865326-14865482)
chr3 (1-310)||(17240897-17241196)
chr3 (1-90)||(14865266-14865355)
chr3 (1-90)||(17131151-17131240)
chr3 (1-52)||(12034017-12034068)
chr3 (224-310)||(13313281-13313368)
chr3 (224-310)||(13324173-13324260)
chr3 (1-48)||(16802043-16802090)
chr3 (1-103)||(55499658-55499749)
chr3 (252-298)||(55499503-55499550)
chr3 (253-310)||(13302625-13302683)
[»] scaffold0924 (1 HSPs)
scaffold0924 (3-310)||(1138-1446)
[»] chr5 (21 HSPs)
chr5 (1-310)||(23527990-23528300)
chr5 (1-280)||(28889751-28890031)
chr5 (1-280)||(28896455-28896735)
chr5 (1-280)||(28909703-28909983)
chr5 (1-280)||(28931395-28931675)
chr5 (1-280)||(28946098-28946378)
chr5 (122-306)||(19236381-19236566)
chr5 (122-298)||(22460637-22460813)
chr5 (122-298)||(22467261-22467437)
chr5 (59-280)||(20819639-20819860)
chr5 (59-280)||(20826739-20826960)
chr5 (81-280)||(28925281-28925481)
chr5 (157-287)||(18408351-18408481)
chr5 (1-90)||(19236321-19236410)
chr5 (1-195)||(28932980-28933178)
chr5 (1-90)||(22467201-22467290)
chr5 (120-287)||(22439157-22439324)
chr5 (1-90)||(22460577-22460666)
chr5 (2-45)||(22439327-22439370)
chr5 (2-127)||(18408450-18408575)
chr5 (162-197)||(19405289-19405324)
[»] chr4 (15 HSPs)
chr4 (1-306)||(8046222-8046528)
chr4 (1-310)||(53483062-53483373)
chr4 (56-310)||(15407552-15407807)
chr4 (122-280)||(16147247-16147405)
chr4 (120-280)||(11847583-11847744)
chr4 (209-287)||(13887352-13887430)
chr4 (1-90)||(16147376-16147465)
chr4 (211-310)||(14486229-14486329)
chr4 (209-287)||(13888209-13888287)
chr4 (209-287)||(15307687-15307765)
chr4 (220-287)||(15244793-15244860)
chr4 (233-287)||(8834486-8834540)
chr4 (36-90)||(11847560-11847614)
chr4 (1-84)||(15244636-15244719)
chr4 (220-265)||(8834453-8834498)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-310)||(539-849)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-310)||(14783-15082)
[»] scaffold0456 (2 HSPs)
scaffold0456 (1-310)||(396-705)
scaffold0456 (1-310)||(7541-7850)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-310)||(8961-9272)
scaffold0117 (264-310)||(2284-2330)
[»] scaffold0029 (5 HSPs)
scaffold0029 (1-310)||(111273-111571)
scaffold0029 (142-298)||(91600-91756)
scaffold0029 (142-298)||(97326-97482)
scaffold0029 (1-90)||(91747-91836)
scaffold0029 (1-90)||(97473-97562)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-310)||(49595-49850)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-245)||(10732-10966)
scaffold0247 (252-298)||(10953-11000)
[»] scaffold0235 (2 HSPs)
scaffold0235 (56-310)||(22979-23235)
scaffold0235 (56-223)||(15350-15518)
[»] chr1 (12 HSPs)
chr1 (122-298)||(20851531-20851707)
chr1 (122-298)||(20858158-20858334)
chr1 (122-298)||(21705756-21705932)
chr1 (122-280)||(21710299-21710457)
chr1 (56-287)||(18712214-18712445)
chr1 (1-107)||(41111300-41111407)
chr1 (1-90)||(20858305-20858394)
chr1 (1-90)||(21705696-21705785)
chr1 (1-90)||(20851678-20851767)
chr1 (1-90)||(21710239-21710328)
chr1 (219-287)||(22030157-22030225)
chr1 (170-245)||(19961718-19961793)
[»] scaffold0107 (1 HSPs)
scaffold0107 (59-310)||(40914-41166)
[»] scaffold0077 (2 HSPs)
scaffold0077 (115-298)||(4018-4202)
scaffold0077 (56-103)||(4153-4200)
[»] scaffold0085 (2 HSPs)
scaffold0085 (122-280)||(4089-4246)
scaffold0085 (1-90)||(4217-4306)
[»] scaffold0053 (3 HSPs)
scaffold0053 (122-280)||(79907-80065)
scaffold0053 (1-90)||(80036-80125)
scaffold0053 (209-287)||(81624-81702)
[»] scaffold0023 (2 HSPs)
scaffold0023 (181-298)||(134979-135096)
scaffold0023 (1-90)||(134871-134960)
[»] scaffold0261 (1 HSPs)
scaffold0261 (213-310)||(23956-24053)
[»] scaffold0124 (1 HSPs)
scaffold0124 (56-287)||(34686-34917)
[»] scaffold0020 (2 HSPs)
scaffold0020 (120-310)||(102314-102505)
scaffold0020 (56-127)||(102437-102508)
[»] scaffold0461 (1 HSPs)
scaffold0461 (56-287)||(417-637)
[»] scaffold0139 (1 HSPs)
scaffold0139 (209-287)||(15408-15486)
[»] scaffold0222 (1 HSPs)
scaffold0222 (1-310)||(16192-16490)
[»] scaffold0138 (1 HSPs)
scaffold0138 (209-287)||(1385-1463)
[»] scaffold0094 (1 HSPs)
scaffold0094 (219-287)||(51822-51890)
[»] scaffold0031 (2 HSPs)
scaffold0031 (219-287)||(121479-121547)
scaffold0031 (219-287)||(132356-132424)
[»] scaffold0310 (2 HSPs)
scaffold0310 (114-265)||(17400-17551)
scaffold0310 (1-47)||(6930-6976)
[»] scaffold0028 (2 HSPs)
scaffold0028 (219-287)||(1645-1713)
scaffold0028 (209-245)||(65662-65698)
[»] scaffold0004 (2 HSPs)
scaffold0004 (56-203)||(116331-116478)
scaffold0004 (209-287)||(129068-129146)
[»] scaffold0483 (1 HSPs)
scaffold0483 (181-280)||(11425-11524)
[»] scaffold0335 (1 HSPs)
scaffold0335 (210-287)||(3037-3114)
[»] scaffold0634 (2 HSPs)
scaffold0634 (1-43)||(3094-3136)
scaffold0634 (211-280)||(3232-3301)
[»] scaffold0476 (2 HSPs)
scaffold0476 (1-90)||(3837-3926)
scaffold0476 (120-188)||(3800-3868)
[»] scaffold0001 (1 HSPs)
scaffold0001 (210-287)||(525332-525409)
[»] scaffold0090 (1 HSPs)
scaffold0090 (223-306)||(17750-17833)
[»] scaffold0317 (2 HSPs)
scaffold0317 (57-131)||(833-907)
scaffold0317 (209-243)||(974-1008)
[»] scaffold0232 (1 HSPs)
scaffold0232 (253-287)||(18840-18874)
[»] scaffold0154 (1 HSPs)
scaffold0154 (253-310)||(30466-30524)
[»] scaffold0359 (1 HSPs)
scaffold0359 (154-194)||(1002-1042)


Alignment Details
Target: scaffold0026 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 12545 - 12237
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  12545 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 12446  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||||||| |||||||||||||||| |  ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  12445 gctcacagggtcgcttacagttcgcttgcgtgaatccttggcagaatcaaacttagttttcgcttaccagctcgctcactgttcgcttaagcgaacgggt 12346  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttag 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  12345 aaaatcgcatt-tgggcagcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaatcatctggccagtgcaaaacctatggtttcag 12247  T
Q  301 acctcttctc 310  Q
    ||||||||||    
T  12246 acctcttctc 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 29614843 - 29614534
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  29614843 cgcttaagcgaccgacttacagtaggtctgggttcagctcgcttacgggttgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 29614744  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||  ||| ||||||  ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  29614743 gctcactaggtcgcttaccattcgcttgagcgaatccttggcagaatcaaacttaattttcgcttaccaactcgctcactgttcgcttaagcgaacgggt 29614644  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttag 300  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  29614643 aaaatcgcattctgggcagtttgcatgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgtgcagtgcaaaacctacggtttcag 29614544  T
Q  301 acctcttctc 310  Q
    ||||||||||    
T  29614543 acctcttctc 29614534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 12167723 - 12168033
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  12167723 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 12167822  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||  |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  12167823 cgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 12167922  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  12167923 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagtgcaaaacctacggtttca 12168022  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  12168023 gacctcttctc 12168033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 19286632 - 19286942
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  19286632 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 19286731  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||  |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  19286732 cgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 19286831  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  19286832 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagtgcaaaacctacggtttca 19286931  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  19286932 gacctcttctc 19286942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 19786564 - 19786254
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  19786564 cgcttaagcgaccagcttacagtaggttctgggttcacttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 19786465  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||  |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  19786464 cgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 19786365  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  19786364 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctgggcagtgcaaaacctacggtttca 19786265  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  19786264 gacctcttctc 19786254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 19877816 - 19878126
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  19877816 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 19877915  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||| ||| ||||||  ||||||| ||| ||  |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  19877916 cgctcacaaggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 19878015  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| |    
T  19878016 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcgtctgggcagtgcaaaacctacggtttca 19878115  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  19878116 gacctcttctc 19878126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 19883592 - 19883902
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  19883592 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 19883691  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||  ||| |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  19883692 cgctcacagggtcgcttaccattcgcttaagcgaaatcttagcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 19883791  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||| |    
T  19883792 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccactcgtctgggcagtgcaaaacctacggtttca 19883891  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  19883892 gacctcttctc 19883902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 34640684 - 34640380
Alignment:
Q  1 cgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||    
T  34640684 cgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggttttt 34640585  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||||||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  34640584 cgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 34640485  T
Q  200 -taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||     
T  34640484 caaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacagtgcaaaacctacggtttc 34640385  T
Q  299 agacc 303  Q
    |||||    
T  34640384 agacc 34640380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 34647358 - 34647054
Alignment:
Q  1 cgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||    
T  34647358 cgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggttttt 34647259  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||||||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  34647258 cgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 34647159  T
Q  200 -taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||     
T  34647158 caaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacagtgcaaaacctacggtttc 34647059  T
Q  299 agacc 303  Q
    |||||    
T  34647058 agacc 34647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 25470399 - 25470096
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    |||||||||||||  |||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||||| ||  | |||||||||||||||||||    
T  25470399 cgcttaagcgaccaacttacagtaggttctgggctcagttcgcttacgggtcgctcacggttcgcttgagcgaattttggacagaatcaaaatggttttt 25470300  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||| || | ||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  25470299 cgctcacagggtcgcttaccattcgcttaagcgaattctagacagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 25470200  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttt 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||     
T  25470199 taaaatcgcattctgggcagcttgcttgaatgttcgcttaagcgacaggtgcttcgcttaagcgaccattcatctgggcagtgcaaaaacctacggtttc 25470100  T
Q  299 agac 302  Q
    ||||    
T  25470099 agac 25470096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 21365173 - 21364876
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  21365173 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 21365074  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  21365073 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaggcgaacgggt 21364974  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |||||| ||||||||| || |  | |||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| | |||| ||||| ||||    
T  21364973 aaaatcacattctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgatttt 21364876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 23969155 - 23968858
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  23969155 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 23969056  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  23969055 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaggcgaacgggt 23968956  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |||||| ||||||||| || |  | |||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| | |||| ||||| ||||    
T  23968955 aaaatcacattctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgatttt 23968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 20008522 - 20008346
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  20008522 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 20008423  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  20008422 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 20008346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 18799911 - 18800085
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| |||||||| ||| ||| |||||||||||||||   |||||| ||||||  |||||||||||||||||||||||||||||| |||||| |||||    
T  18799911 gcttacggttcgcttaagcgaattcttggcagaatcaaatcaaattttcgcttacaggctcgctcactgttcgcttaagcgaacgggcaaaatcacattc 18800010  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    | ||||||||||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  18800011 ttggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 18800085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 287
Target Start/End: Original strand, 9186918 - 9187140
Alignment:
Q  65 ttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaattttt-gc 163  Q
    |||||||||||||||||||||| ||| || ||| ||||| || || |||||||  |||||||||||||||  |||||||||||  || ||| ||||| ||    
T  9186918 ttgagcgaacttctggcagaatgaaattgatttatcgcttacgggtttgcttatggttcgcttgagcaaactcttggcagaatggaa-ttattttttcgc 9187016  T
Q  164 ttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcg 263  Q
    || |  ||||||||| ||||||||||||||||| |  ||||  | ||||| ||||||||||||||||||||||||||||||| | |  ||||||||||||    
T  9187017 ttgcaggctcgctcattgttcgcttaagcgaactgacaaaacagaattctaggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcg 9187116  T
Q  264 accaatcatctgggcagtgcaaaa 287  Q
    |||| |||||||||||||||||||    
T  9187117 accattcatctgggcagtgcaaaa 9187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 157 - 287
Target Start/End: Complemental strand, 24513383 - 24513253
Alignment:
Q  157 tttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgc 256  Q
    |||| ||||||  ||||||||||||||| ||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||||| | |  |||||    
T  24513383 ttttcgcttacaggctcgctcactgttcacttaagcgaactgacaaaatcgaattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgc 24513284  T
Q  257 ttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||| |||||||||||||||||||    
T  24513283 ttaagcgaccattcatctgggcagtgcaaaa 24513253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 21565774 - 21565627
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| |||||||||||| ||  ||||||| ||||||| |   |||| |||||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  21565774 gcttacggttcgcttgagcgaactcttggcataatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaa-tcgcattc 21565676  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaag 261  Q
    ||||||||||||| ||||||||||||||||||| | || ||||||||||    
T  21565675 tgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag 21565627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20008582 - 20008493
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  20008582 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 20008493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 19471823 - 19471745
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  |||| |||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  19471823 attctgggttgcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 19471745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21565814 - 21565723
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||           ||||||||||||||||||||  ||||| ||||||| |||||||||    
T  21565814 cgcttaagcgaccggcttacagtaagtctgggttctgctcgctt-----------acggttcgcttgagcgaactcttggcataatcaaattggtttttc 21565726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18799871 - 18799918
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgg 48  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  18799871 cgcttaagcgaccggcttacagtaagtctgggttccgctcgcttacgg 18799918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 19300274 - 19300199
Alignment:
Q  170 gctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgac 245  Q
    ||||||| || |||||||||||||||||| ||||| |  ||||||||  ||| |||||||||||||||||||||||    
T  19300274 gctcgcttacggttcgcttaagcgaacggctaaaaacaaattctgggttgctagcttgaatgctcgcttaagcgac 19300199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 24513423 - 24513370
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagg 109  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||    
T  24513423 acggttcgcttgagcgaacttctggaagaatgaaaatgatttttcgcttacagg 24513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 25396750 - 25396818
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||| |||||||||||||||||||||  | |  |||||||||||||||| |||||||||||||| ||||    
T  25396750 gcttacttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgtaaaa 25396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 276
Target Start/End: Original strand, 31251951 - 31252057
Alignment:
Q  170 gctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgac-agatgcttcgcttaagcgaccaa 268  Q
    |||||||||| |||||||||||||||||| ||||  |   |||||||||||   |||||  |||||||||||||||  |||| ||||||||||||||||     
T  31251951 gctcgctcacggttcgcttaagcgaacggctaaagacaatttctgggcagcgatcttgatcgctcgcttaagcgacgggatg-ttcgcttaagcgaccac 31252049  T
Q  269 tcatctgg 276  Q
    ||||||||    
T  31252050 tcatctgg 31252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19471969 - 19471888
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggca 82  Q
    ||||||||||||||||| |||| | ||  |||||| ||||||| |||| ||| |  |||||||||| |||||||||||||||    
T  19471969 cgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggctcgcttgcggttcgcttaagcgaacttctggca 19471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13006792 - 13007102
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  13006792 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 13006891  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||  |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  13006892 cgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 13006991  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  13006992 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagtgcaaaacctacggtttca 13007091  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  13007092 gacctcttctc 13007102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13743068 - 13743378
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaa-tggttttt 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||| | ||||||    
T  13743068 cgcttaagcgaccggcttatagtaggtctgggttcagctcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaaattgttttt 13743167  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    ||||||| |||| |||||   ||||||| ||  ||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  13743168 cgctcacggggtcgcttatcattcgcttaagtgaattcttggcagaatcgaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacggg 13743267  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    || ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13743268 tagaatcgcattctgggcagtttccttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttca 13743367  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  13743368 gacctcttctc 13743378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 13123611 - 13123302
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  13123611 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 13123512  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  13123511 gctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggt 13123412  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttag 300  Q
    | ||||||||||||||||| |  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13123411 agaatcgcattctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcag 13123312  T
Q  301 acctcttctc 310  Q
    ||||||||||    
T  13123311 acctcttctc 13123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 12591339 - 12591037
Alignment:
Q  1 cgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||| ||  | |||||||||||||||||||    
T  12591339 cgcttaagcgaccagcttacagtaggatctgggatcagttcgcttacgggtcgctcacggttcgcttgagcgaaatttggacagaatcaaaatggttttt 12591240  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  12591239 cgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 12591140  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  12591139 taaaatcgcattctgggaagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctgggcagtgcaaaacctacggtttca 12591040  T
Q  300 gac 302  Q
    |||    
T  12591039 gac 12591037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 12710540 - 12710231
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||  | |||||||||||||||||||     
T  12710540 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacaggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttg 12710441  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  12710440 gctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggt 12710341  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttag 300  Q
    | ||||||||||||||||| |  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12710340 agaatcgcattctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcag 12710241  T
Q  301 acctcttctc 310  Q
    ||||||||||    
T  12710240 acctcttctc 12710231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 3858060 - 3857784
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaa-tggttttt 99  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    ||||||||||| ||||||||    
T  3858060 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttgaacagaatcaaaaatggttttt 3857961  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||| ||| ||||||  ||||||| ||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  3857960 cgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaggcgaacggg 3857861  T
Q  200 taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgg 276  Q
    ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| ||||||||    
T  3857860 taaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctgg 3857784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 11389931 - 11389734
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| |||||||||||| ||| ||||||||||||||| | |||||| |||||| |||||||||| |||||||||||||||||||| |||||||||||     
T  11389931 gcttacggttcgcttgagcgaattcttggcagaatcaaattaaattttcgcttacaagctcgctcattgttcgcttaagcgaacgggcaaaatcgcatta 11389832  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttagacctcttctc 310  Q
    ||| ||||||||||||||||||||||||||||| | |  ||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||    
T  11389831 tggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaaccgaccattcatctgggcagtgcaaaacctacgggttcagacctcttctc 11389734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 122 - 310
Target Start/End: Complemental strand, 11383445 - 11383257
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||||||| ||| ||||||||||||||| | |||||| |||||| || ||||||| |||||||||||||||| ||| |||||| |||||| |||||||    
T  11383445 tcgcttgagcgaattcttggcagaatcaaattaaattttcgcttacaagatcgctcattgttcgcttaagcgaaagggcaaaatcacattctaggcagct 11383346  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttagacctcttctc 310  Q
    |||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  11383345 tgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaacctacgggttcagacctcttctc 11383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 2966447 - 2966623
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  2966447 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 2966546  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  2966547 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 2966623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 2464865 - 2465021
Alignment:
Q  142 cagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 241  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || |||||| || |  | |||||| |||||||||    
T  2464865 cagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaag 2464964  T
Q  242 cgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |||| |||||||||||||||||||||||| ||||||||| | |||| ||||| ||||    
T  2464965 cgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgatttt 2465021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 29181668 - 29181525
Alignment:
Q  137 cttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagcttgcttgaatgctcg 235  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  ||| ||| ||||| | | |||||| |||    
T  29181668 cttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgagcagc-tacatgaatgttcg 29181570  T
Q  236 cttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||    
T  29181569 cttaaacgacgggtgcttcgcttaagcgaccactcatctgggcag 29181525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 21231484 - 21231369
Alignment:
Q  172 tcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatca 271  Q
    ||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| ||| | |  |||||||||||||||| |||    
T  21231484 tcgctcactgttcgcttaagcgaactgacaaaatcgcattttgggcagcttgcttgaatgctcgcttaagtgacgggtcgttcgcttaagcgaccattca 21231385  T
Q  272 tctgggcagtgcaaaa 287  Q
    ||||||||||||||||    
T  21231384 tctgggcagtgcaaaa 21231369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 20907022 - 20906876
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| |||||||||           ||||||||||||||||||||||||| |||||||||||| |    
T  20907022 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccag-----------ttcgcttaagcgaacgggtaaaatcacattctgggcag-t 20906935  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    | | |||||| ||||||||||||| | |||||||||||||||||||||||||| |||||    
T  20906934 tacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatcttggcag 20906876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2464785 - 2464874
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||  | ||||||||||    
T  2464785 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgggcgaactttggacagaatcaaa 2464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2966387 - 2966476
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |  |||||||||||||    
T  2966387 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgttcacggctcgcttaagcgaattcttggcagaatcaaa 2966476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 16676792 - 16676917
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcag 219  Q
    |||||||||||| ||| |||| |||||||||| |   |||| ||||||  | ||||| || |||||||| |||||| ||| ||| |||||||||||| ||    
T  16676792 gttcgcttgagcgaattcttgacagaatcaaaatggtttttcgcttacaggttcgcttacggttcgcttgagcgaaagggcaaagtcgcattctgggtag 16676891  T
Q  220 cttgcttgaatgctcgcttaagcgac 245  Q
    ||||||||||||||||||||||||||    
T  16676892 cttgcttgaatgctcgcttaagcgac 16676917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 17651028 - 17651153
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcag 219  Q
    |||||||||||| ||| |||| |||||||||| |   |||| ||||||  | ||||| || |||||||| |||||| ||| ||| |||||||||||| ||    
T  17651028 gttcgcttgagcgaattcttgacagaatcaaaatggtttttcgcttacaggttcgcttacggttcgcttgagcgaaagggcaaagtcgcattctgggtag 17651127  T
Q  220 cttgcttgaatgctcgcttaagcgac 245  Q
    ||||||||||||||||||||||||||    
T  17651128 cttgcttgaatgctcgcttaagcgac 17651153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29181743 - 29181654
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| ||||||| |||||| |||||| |||||| ||||||||  |||||||||||||    
T  29181743 cgcttaagcgaccatcttacagtaggtctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaactcttggcagaatcaaa 29181654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 46625527 - 46625605
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  ||||||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  46625527 attctgggttgcttgcttgaatgctcgcttaagcgacgggtagttcgcttaagcgaccattcatctgggcagtgcaaaa 46625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16090506 - 16090595
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| | |||| |||||| |  |||||||||||||    
T  16090506 cgcttaagcgaccatcttacagtaggtctgggttcagttcgcttacgggtcgctcacggcttgcttaagcgaattcttggcagaatcaaa 16090595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16676745 - 16676864
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||           |||||||||||||| |  || ||||||||||||||||||||    
T  16676745 cgcttaagcgaccggcttacagtaagtctgggttccgctcgcttatgg-----------ttcgcttgagcgaattcttgacagaatcaaaatggtttttc 16676833  T
Q  101 gctcacagggttgcttacagttcgcttgagc 131  Q
    ||| ||||| | |||||| ||||||||||||    
T  16676834 gcttacaggttcgcttacggttcgcttgagc 16676864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17650981 - 17651100
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||           |||||||||||||| |  || ||||||||||||||||||||    
T  17650981 cgcttaagcgaccggcttacagtaagtctgggttccgctcgcttatgg-----------ttcgcttgagcgaattcttgacagaatcaaaatggtttttc 17651069  T
Q  101 gctcacagggttgcttacagttcgcttgagc 131  Q
    ||| ||||| | |||||| ||||||||||||    
T  17651070 gcttacaggttcgcttacggttcgcttgagc 17651100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 20311628 - 20311461
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcag 219  Q
    |||||||| ||| ||| |||||||||||||||   ||||||||||||| | ||||||| |||||||||| ||||||||| ||||  ||  |||||||  |    
T  20311628 gttcgcttaagcgaattcttggcagaatcaaatcgaatttttgcttacaatctcgctctctgttcgcttgagcgaacggctaaagacgatttctgggttg 20311529  T
Q  220 cttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||  | |||||| ||||||||||||| | |  ||||| || ||||| | |||||||||| ||||||||    
T  20311528 ctaacatgaatgttcgcttaagcgacgggtcgttcgcataggcgactattcatctgggctgtgcaaaa 20311461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20311686 - 20311597
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||| ||| |  |||||||||| |||||| |  |||||||||||||    
T  20311686 cgcttaagcgaccggcttgcagtaagtctgggttctgctcgcttacggttcgcttgcggttcgcttaagcgaattcttggcagaatcaaa 20311597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20907082 - 20906993
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |  ||| |||||| |||||| |||||| |  |||||||||||||    
T  20907082 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgtttcgttcacggctcgcttaagcgaattcttggcagaatcaaa 20906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 13664462 - 13664577
Alignment:
Q  172 tcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatca 271  Q
    |||||||| |||||||| ||||||| |  |||   | |||||||| ||||| |||||||||||||||||||||| | |  ||||||| ||||| || |||    
T  13664462 tcgctcacggttcgcttgagcgaactgacaaatcagaattctgggtagcttacttgaatgctcgcttaagcgacgggtcgttcgcttgagcgatcattca 13664561  T
Q  272 tctgggcagtgcaaaa 287  Q
    ||| ||||||||||||    
T  13664562 tctaggcagtgcaaaa 13664577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 16676905 - 16676951
Alignment:
Q  253 tcgcttaagcgaccaatcatctgggcagtgca-aaacctacggtttt 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16676905 tcgcttaagcgaccaatcatctgggcagtgcagaaacctacggtttt 16676951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 17651141 - 17651187
Alignment:
Q  253 tcgcttaagcgaccaatcatctgggcagtgca-aaacctacggtttt 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  17651141 tcgcttaagcgaccaatcatctgggcagtgcagaaacctacggtttt 17651187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 16090568 - 16090618
Alignment:
Q  124 gcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcg 174  Q
    |||| ||| ||| |||||||||||||||||||||||| |||||||||||||    
T  16090568 gcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcg 16090618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 21231576 - 21231532
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  21231576 acggttcgcttgagcgaacttctggtagaatgaaaatgatttttc 21231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11389971 - 11389924
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgg 48  Q
    |||||||||||||| || |||||| |||||||||| ||||||||||||    
T  11389971 cgcttaagcgaccgactcacagtaagtctgggttccgctcgcttacgg 11389924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 13678940 - 13679014
Alignment:
Q  57 cggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagc 131  Q
    |||||||||| |||||||||||| ||||||  ||||| ||||||||| || || | ||| || ||||||||||||    
T  13678940 cggttcgcttaagcgaacttctgacagaatggaaatgatttttcgcttacgggttcgctcacggttcgcttgagc 13679014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 13679081 - 13679115
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcg 243  Q
    |||||||| ||||||||||||||||||||||||||    
T  13679081 attctgggtagcttgcttgaatgctcgcttaagcg 13679115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 5706719 - 5706409
Alignment:
Q  1 cgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||    
T  5706719 cgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggttttt 5706620  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||||||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  5706619 cgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 5706520  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||| |    
T  5706519 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacagtgcaaaacctacggtttca 5706420  T
Q  300 gacctcttctc 310  Q
    |||| ||||||    
T  5706419 gaccacttctc 5706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26583208 - 26583452
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  26583208 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 26583307  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| ||||||  ||||||| ||| |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  26583308 gctcactgggtcgcttaccattcgcttaagcgaatccttggcagaatcaaacttaattttcgcttaccagttcactcactgttcgcttaagcgaacgggt 26583407  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgac 245  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  26583408 aaaatcgcattctgagcagcttgcttgaatgctcgcttaagcgac 26583452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 10057 - 10233
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  10057 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 10156  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  10157 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 10233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 23878370 - 23878673
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||| ||||  ||    
T  23878370 cgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgcttgcagttcgcttgagcgaattcttggcagaatcaaaaaggttcctc 23878469  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||||| | |||||| |||||||| ||| ||||||||||| |||||||   |||||| |||||| ||||||||| ||||||||||  |||||||| |    
T  23878470 gctcacaggttcgcttacggttcgcttaagcgaatccttggcataatcaaatcaaattttcgcttacaagctcgctctctgttcgcttgcgcgaacggct 23878569  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctac-ggtttta 299  Q
    ||   ||  |||||||  |||  | |||||| |||||||||||||   |  |||||||||||||| | |||||||| | ||||||||||||| |||||||    
T  23878570 aaggacgatttctgggttgctaacatgaatgttcgcttaagcgacgagtcgttcgcttaagcgactattcatctggactgtgcaaaacctacgggtttta 23878669  T
Q  300 gacc 303  Q
    ||||    
T  23878670 gacc 23878673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 113 - 298
Target Start/End: Complemental strand, 23102045 - 23101859
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| |||||||| ||| ||  ||||||||||||||| |   |||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  23102045 gcttacggttcgcttaagcgaactcttggcagaatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaaatcgcattc 23101946  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgca-aaacctacggtttt 298  Q
    |||||||||| ||||||| |||||||||||||| | || |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  23101945 tgggcagcttccttgaattctcgcttaagcgacggctggttcgcttaagcgaccattcatctgggcagtgcagaaacctacggtttt 23101859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 23089617 - 23089470
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| |||||||||||| ||  ||||||| ||||||| |   |||| |||||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  23089617 gcttacggttcgcttgagcgaactcttggcataatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaa-tcgcattc 23089519  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaag 261  Q
    ||||||||||||| ||||||||||||||||||| | || ||||||||||    
T  23089518 tgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag 23089470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 25181475 - 25181352
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| || |    
T  25181475 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattatgggtagtt 25181376  T
Q  222 tgcttgaatgctcgcttaagcgac 245  Q
      | |||||| |||||||||||||    
T  25181375 cacgtgaatgttcgcttaagcgac 25181352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9997 - 10086
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  9997 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 56 - 276
Target Start/End: Original strand, 23264557 - 23264777
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||||| || || | |||||  |||||||||||| ||  |||||||||||  || |      
T  23264557 acggttcgcttgagcgaacttctgacataatgaaaatgatttttcgcttacgggttcgcttatggttcgcttgagcgaactcttggcagaatggaattat 23264656  T
Q  156 atttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcg 255  Q
    ||||| ||||||  |||||||||| |||||||| ||||||||| ||||  ||  |||||||  |||  | ||| || ||||||||||||| | |  ||||    
T  23264657 attttcgcttacaggctcgctcacagttcgcttgagcgaacggctaaagacgatttctgggttgctaacatgagtgttcgcttaagcgacgggtcgttcg 23264756  T
Q  256 cttaagcgaccaatcatctgg 276  Q
    |||||| ||||| ||||||||    
T  23264757 cttaagtgaccattcatctgg 23264777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 25181534 - 25181446
Alignment:
Q  2 gcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  25181534 gcttaagcgaccagcttacagtaggtctgggttcagttcacttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 25181446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 23063256 - 23063330
Alignment:
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||| |||||||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  23063256 tgggtagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 23063330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29281417 - 29281506
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| ||  || |||||| |  |||||||||||||    
T  29281417 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcaattaagcgaattcttggcagaatcaaa 29281506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 29281492 - 29281538
Alignment:
Q  137 cttggcagaatcaaacttaatttttgcttaccagctcgctcactgtt 183  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29281492 cttggcagaatcaaacttaattttcgcttaccagctcgctcactgtt 29281538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23089657 - 23089566
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||           ||||||||||||||||||||  ||||| ||||||| |||||||||    
T  23089657 cgcttaagcgaccggcttacagtaagtctgggttctgctcgctt-----------acggttcgcttgagcgaactcttggcataatcaaattggtttttc 23089569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 24661159 - 24661222
Alignment:
Q  224 cttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||||||||||||||||||||| | |  |||||||||||||||| |||| ||||||||||||||    
T  24661159 cttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatttgggcagtgcaaaa 24661222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23102085 - 23101994
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||| || |||||||||||| |||||||||| ||||||||||||           ||||||| ||||||||  ||||||||||||| |||||||||    
T  23102085 cgcttaagtgatcggcttacagtaagtctgggttctgctcgcttacgg-----------ttcgcttaagcgaactcttggcagaatcaaattggtttttc 23101997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 25181365 - 25181319
Alignment:
Q  252 ttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    ||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  25181365 ttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 25181319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 20627886 - 20627854
Alignment:
Q  162 gcttaccagctcgctcactgttcgcttaagcga 194  Q
    |||||||||||||||||||| ||||||||||||    
T  20627886 gcttaccagctcgctcactggtcgcttaagcga 20627854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 17053951 - 17054261
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  17053951 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 17054050  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||  |||||||||| | ||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  17054051 cgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaacccaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 17054150  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  17054151 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatacttcgcttaagcgaccactcatctgggcagtgcaaaacctacggtttca 17054250  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  17054251 gacctcttctc 17054261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 23865973 - 23866282
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  23865973 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 23866072  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    | |||| |||| ||||||  ||||||| ||| |||  ||||||||| ||||||||||||| ||||||||| |||||||  ||||||||||||||||||||    
T  23866073 gatcacggggtcgcttaccattcgcttaagcgaatttttggcagaaccaaacttaattttcgcttaccagttcgctcatggttcgcttaagcgaacgggt 23866172  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttag 300  Q
    | ||||||||||||||||| |  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23866173 agaatcgcattctgggcagttaccttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcag 23866272  T
Q  301 acctcttctc 310  Q
    ||||||||||    
T  23866273 acctcttctc 23866282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 56 - 310
Target Start/End: Complemental strand, 14057204 - 14056949
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || | |||||  |||||||||||| ||  ||||||||||||||| | |    
T  14057204 acggttcgcttgagcgaacttatggcagaatcaaaatggtttttcactcacgggttcgcttatggttcgcttgagcgaactcttggcagaatcaaaataa 14057105  T
Q  156 atttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcg 255  Q
    | ||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |  ||||    
T  14057104 aatttcgcttacaagctcgctcactgttcgcttaagcgaacgggcaaaatcgtattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcg 14057005  T
Q  256 cttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    |||||||||||| ||||||||||||||| ||||||||||| || | ||||||||||    
T  14057004 cttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctcttctc 14056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 24321245 - 24321069
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  24321245 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 24321146  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| | |||| ||||| ||||    
T  24321145 cacgtgaatgttcgcttaagcgacggatgctttgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 24321069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 25111474 - 25111622
Alignment:
Q  139 tggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgctt 238  Q
    ||||||||||||| |   |||| ||||||  | ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25111474 tggcagaatcaaaatggtttttcgcttacgggttcgctcattgttcgcttaagcgaacgggcaaaatcgcattctgggcagcttgcttgaatgctcgctt 25111573  T
Q  239 aagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    || |||| | |  |||||||||||||||| |||||||||||||||||||    
T  25111574 aaacgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 25111622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 310
Target Start/End: Original strand, 18613783 - 18613943
Alignment:
Q  153 ttaattttt-gcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgc 251  Q
    ||||||||| |||||| || |||||  | |||||||||||||||| |  ||| | | ||||||||||||||||||||||||||||||||||||| | |      
T  18613783 ttaatttttcgcttacaagttcgctagcagttcgcttaagcgaactgacaaattagaattctgggcagcttgcttgaatgctcgcttaagcgacggtttt 18613882  T
Q  252 ttcgcttaagcgaccaatcatctgggcagtgc-aaaacctac-ggttttagacctcttctc 310  Q
    |||||||||||||||| ||||||||||||||| ||||||||| ||||| | ||||||||||    
T  18613883 ttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaacctcttctc 18613943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24321305 - 24321216
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  24321305 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 24321216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 25111452 - 25111499
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgct 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25111452 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgct 25111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 21839979 - 21840047
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||||||||| ||||||| |||  |||||||||| ||||| |||||||||||||||||||    
T  21839979 gcttgcttgaatgctcgctcaagcgacggatcgttcgcttaagtgaccattcatctgggcagtgcaaaa 21840047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 21931275 - 21931343
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||||||||| ||||||| |||  ||||||| || ||||| |||||||||||||||||||    
T  21931275 gcttgcttgaatgctcgctcaagcgacggatcgttcgcttcagagaccattcatctgggcagtgcaaaa 21931343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 24192313 - 24192623
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  24192313 cgcttaagcgaccggcttacagtaagtctgggttcaactcacttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 24192412  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| |||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||     
T  24192413 gctcaccgggtcgcttacggttcgcttaagcaaatccttggcagaatcaaatttaattttcgcttaccagttcgctcactgtttgcttaagcgaacggga 24192512  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttta 299  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||  | | ||||||||||||||||||||||||||||||||| |||||||||| ||| |    
T  24192513 aaaatcgcattatgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaagcgaccaatcatctgggcagtgcaaaaacctacgatttca 24192612  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  24192613 gacctcttctc 24192623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 41455795 - 41455483
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaa--tggttt 97  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||||||||  ||||||    
T  41455795 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaaattggttt 41455696  T
Q  98 ttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacg 197  Q
    ||||||||| |||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| |||| ||| |||||||||||||||||    
T  41455695 ttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgcccacggttcgcttaagcgaacg 41455596  T
Q  198 ggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttt 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  41455595 ggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggattcttcgcttaagcgaccactcatctgggcagtgtaaaacctacggttt 41455496  T
Q  298 tagacctcttctc 310  Q
     ||||||||||||    
T  41455495 cagacctcttctc 41455483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 59 - 302
Target Start/End: Complemental strand, 10390083 - 10389840
Alignment:
Q  59 gttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatt 158  Q
    ||||||||||||||| ||  | |||||||||||||||||||||||||||| || ||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  10390083 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagagtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 10389984  T
Q  159 tttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgctt 258  Q
    || |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10389983 ttcgcttactagttcgctcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgctt 10389884  T
Q  259 aagcgaccaatcatctgggcagtgcaaaacctacggttttagac 302  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  10389883 aagcgaccattcatctgggcagtgcaaaacctacggtttcagac 10389840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 59 - 302
Target Start/End: Complemental strand, 10415172 - 10414929
Alignment:
Q  59 gttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatt 158  Q
    ||||||||||||||| ||  | |||||||||||||||||||||||||||| || ||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  10415172 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagagtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 10415073  T
Q  159 tttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgctt 258  Q
    || |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10415072 ttcgcttactagttcgctcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgctt 10414973  T
Q  259 aagcgaccaatcatctgggcagtgcaaaacctacggttttagac 302  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  10414972 aagcgaccattcatctgggcagtgcaaaacctacggtttcagac 10414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 59 - 302
Target Start/End: Complemental strand, 10421842 - 10421599
Alignment:
Q  59 gttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatt 158  Q
    ||||||||||||||| ||  | |||||||||||||||||||||||||||| || ||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  10421842 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagagtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 10421743  T
Q  159 tttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgctt 258  Q
    || |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10421742 ttcgcttactagttcgctcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgctt 10421643  T
Q  259 aagcgaccaatcatctgggcagtgcaaaacctacggttttagac 302  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  10421642 aagcgaccattcatctgggcagtgcaaaacctacggtttcagac 10421599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 16802050 - 16801852
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| |||||||||||| ||| |||||||||||||||   |||||| |||||||||||| ||||| ||||||||||||||||| | ||||||| ||||    
T  16802050 gcttacggttcgcttgagcgaattcttggcagaatcaaatcaaattttcgcttaccagctcactcacagttcgcttaagcgaacgcgcaaaatcgtattc 16801951  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    ||||||| ||||||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||| | |||||||||| ||| | ||||||||||    
T  16801950 tgggcagtttgcttgaatgctcgcttaagcgacgggtccttcgcttaagcgaccattcatctgggcagtacaaaaacctacgatttcatacctcttctc 16801852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 17131211 - 17131388
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt-aaaatcgcattctgggcagc 220  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||     
T  17131211 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaaatcacattctgggtagt 17131310  T
Q  221 ttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |  | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  17131311 tcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 17131388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 24934343 - 24934222
Alignment:
Q  181 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  24934343 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcag 24934244  T
Q  281 tgcaaaacctacggttttagac 302  Q
    |||||||| |||||||| ||||    
T  24934243 tgcaaaacatacggtttcagac 24934222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 298
Target Start/End: Complemental strand, 12034028 - 12033843
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgca-tt 211  Q
    |||||| | |||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  | ||    
T  12034028 gcttacgggtcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgcttactgttcgcttaagcgaacgggtaaaatctaattt 12033929  T
Q  212 ctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
     |||||||| | | |||||| ||||||||||||| |||||||| ||||||||||| |||||||||| || | |||| ||||| ||||    
T  12033928 ttgggcagc-tacatgaatgttcgcttaagcgacggatgcttctcttaagcgaccgatcatctgggtagggtaaaagctacgatttt 12033843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 55499709 - 55499561
Alignment:
Q  113 gcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 212  Q
    |||||| ||||| |||||| ||  ||||||||||||||| |   |||| |||||| ||||||||||  ||||||||||||||||||| ||||||||||||    
T  55499709 gcttacggttcgtttgagcgaactcttggcagaatcaaattggtttttcgcttacaagctcgctcatagttcgcttaagcgaacgggaaaaatcgcattc 55499610  T
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaag 261  Q
    ||||||||||||||||||||||||||||||||| | || ||||||||||    
T  55499609 tgggcagcttgcttgaatgctcgcttaagcgacggctggttcgcttaag 55499561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 14865326 - 14865482
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgca-ttctgggcagc 220  Q
    |||||| ||| ||| ||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  14865326 tcgcttaagcgaattcttggcaaaatcaaattcaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatctaatttctgggcagc 14865425  T
Q  221 ttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggc 278  Q
     | | |||||| ||||||||||||| | | ||||||||||||||||| || |||||||    
T  14865426 -tacatgaatgttcgcttaagcgacgggtacttcgcttaagcgaccactcttctgggc 14865482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 17241196 - 17240897
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||| |||| ||   ||  |||||| ||||||| |||| ||| |  ||||||||||||||||||||||| |||||| ||| || ||||||    
T  17241196 cgcttaagcgaccgacttatagagagttggggttccgctcgctgacggttcgcttgcggttcgcttgagcgaacttctgacagaatgaaattgatttttc 17241097  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaattttt-gcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    ||| || ||           ||||||||||| ||  |||||||||||  || ||| ||||| ||||||  |||| ||||| ||||||||||||||||       
T  17241096 gcttacggg-----------ttcgcttgagcgaactcttggcagaatggaa-ttattttttcgcttacaggctcactcacagttcgcttaagcgaacttc 17241009  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttt 298  Q
    |||||  | ||| |||||||||||||||||||||| |||||||||| | |  |||||||||||||||| |||||||| |||||| ||||||||||| ||     
T  17241008 taaaacagaattatgggcagcttgcttgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattcatctggacagtgcaaaaacctacgggttc 17240909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14865266 - 14865355
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  ||||| |||||||    
T  14865266 cgcttaagcgaccagcttagagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcaaaatcaaa 14865355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 17131151 - 17131240
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||| || |||||| |||||| |  |||||||||||||    
T  17131151 cgcttaagtgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcatggctcgcttaagcgaattcttggcagaatcaaa 17131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12034068 - 12034017
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcg 52  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  12034068 cgcttaagcgaccagcttacagtaggtctgggtttagttcgcttacgggtcg 12034017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 13313368 - 13313281
Alignment:
Q  224 cttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa-cctacggttttagacctcttctc 310  Q
    |||||||||||||||||||||  | |  |||||||||||||| | ||||||||||||  ||||| ||||||| |||||||||||||||    
T  13313368 cttgaatgctcgcttaagcgatgggtcgttcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctc 13313281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 13324260 - 13324173
Alignment:
Q  224 cttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    |||||||||||||||||||||  | |  |||||||||||||||| |||| ||||||| || ||||||||||| || ||||||||||||    
T  13324260 cttgaatgctcgcttaagcgattggtcgttcgcttaagcgaccactcatttgggcagggcaaaaacctacgggttcagacctcttctc 13324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16802090 - 16802043
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgg 48  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  16802090 cgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacgg 16802043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 55499749 - 55499658
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||           |||||||| |||||||||||  ||||||||||||| |||||||||    
T  55499749 cgcttaagcgaccggcttacagtaagtctaggttctgctcgctt-----------acggttcgtttgagcgaactcttggcagaatcaaattggtttttc 55499661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 55499550 - 55499503
Alignment:
Q  252 ttcgcttaagcgaccaatcatctgggcagtgca-aaacctacggtttt 298  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  55499550 ttcgcttaagcgaccattcatctgggcagtgcagaaacctacggtttt 55499503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 13302683 - 13302625
Alignment:
Q  253 tcgcttaagcgaccaatcatctgggcagtgcaaaa-cctacggttttagacctcttctc 310  Q
    ||||||||||||| | ||||||||||||  ||||| ||||||| |||||||||||||||    
T  13302683 tcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctc 13302625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 310
Target Start/End: Complemental strand, 1446 - 1138
Alignment:
Q  3 cttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgc 102  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||||||||| |||||||||    
T  1446 cttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaattgtttttcgc 1347  T
Q  103 tcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaattttt-gcttaccagctcgctcactgttcgcttaagcgaacgggta 201  Q
    |||| |||| |||||   ||||||  ||| ||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||    
T  1346 tcacggggtcgcttatcattcgctgaagcgaattcttggcagaatcaaacttaatttttcgcttaccagttcgctcacggttcgcttgagcgaacgggta 1247  T
Q  202 aaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttaga 301  Q
    |||||||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1246 aaatcgcattctgggcagtttccttgaatgctcacttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcaga 1147  T
Q  302 cctcttctc 310  Q
    |||||||||    
T  1146 cctcttctc 1138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 23527990 - 23528300
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  23527990 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 23528089  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||| ||    
T  23528090 cgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacagg 23528189  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttta 299  Q
     || |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  23528190 caacatcgcattctgggcagcttgcttgaatgctcggttaagcgacgggtgcttcgcttaagcgaccactcatctgggcagtgcaaaacctacggtttca 23528289  T
Q  300 gacctcttctc 310  Q
    |||||||||||    
T  23528290 gacctcttctc 23528300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 28890031 - 28889751
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||  | ||||| ||||||||||||||    
T  28890031 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaactttggacagaaacaaaatggtttttc 28889932  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg- 199  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||     
T  28889931 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacggga 28889832  T
Q  200 taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| |||||| |||||    
T  28889831 taaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcag 28889751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 28896735 - 28896455
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||  | ||||| ||||||||||||||    
T  28896735 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaactttggacagaaacaaaatggtttttc 28896636  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg- 199  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||     
T  28896635 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacggga 28896536  T
Q  200 taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| |||||| |||||    
T  28896535 taaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcag 28896455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 28909983 - 28909703
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||  | ||||| ||||||||||||||    
T  28909983 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaactttggacagaaacaaaatggtttttc 28909884  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg- 199  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||     
T  28909883 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacggga 28909784  T
Q  200 taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| |||||| |||||    
T  28909783 taaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcag 28909703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 28931675 - 28931395
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||  | ||||| ||||||||||||||    
T  28931675 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaactttggacagaaacaaaatggtttttc 28931576  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg- 199  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||     
T  28931575 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacggga 28931476  T
Q  200 taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| |||||| |||||    
T  28931475 taaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcag 28931395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 28946378 - 28946098
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||  | ||||| ||||||||||||||    
T  28946378 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaactttggacagaaacaaaatggtttttc 28946279  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg- 199  Q
    ||||||| ||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||     
T  28946278 gctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacggga 28946179  T
Q  200 taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| |||||| |||||    
T  28946178 taaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggcag 28946098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 122 - 306
Target Start/End: Original strand, 19236381 - 19236566
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  19236381 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 19236480  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt-agacctct 306  Q
      | |||||| |||||||||| || |||||||||||||||||||||||||||||||||| | |||| ||||| |||| ||||||||    
T  19236481 cacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacctct 19236566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 22460637 - 22460813
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| || |    
T  22460637 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattatgggtagtt 22460736  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  22460737 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 22460813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 22467261 - 22467437
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| || |    
T  22467261 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattatgggtagtt 22467360  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  22467361 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 22467437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 59 - 280
Target Start/End: Original strand, 20819639 - 20819860
Alignment:
Q  59 gttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatt 158  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||||| ||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  20819639 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 20819738  T
Q  159 tttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgctt 258  Q
    || ||||||||| |||||||| |||||||||||||||||||||||  |  |||||||||| |     |||  ||||||||||||||  |    |||||||    
T  20819739 ttcgcttaccagttcgctcacagttcgcttaagcgaacgggtaaaggcaaattctgggcatcgattatgatagctcgcttaagcgatgggaagttcgctt 20819838  T
Q  259 aagcgaccaatcatctgggcag 280  Q
    ||||||||| ||||||||||||    
T  20819839 aagcgaccactcatctgggcag 20819860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 59 - 280
Target Start/End: Original strand, 20826739 - 20826960
Alignment:
Q  59 gttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatt 158  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||||| ||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  20826739 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 20826838  T
Q  159 tttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgctt 258  Q
    || ||||||||| |||||||| |||||||||||||||||||||||  |  |||||||||| |     |||  ||||||||||||||  |    |||||||    
T  20826839 ttcgcttaccagttcgctcacagttcgcttaagcgaacgggtaaaggcaaattctgggcatcgattatgatagctcgcttaagcgatgggaagttcgctt 20826938  T
Q  259 aagcgaccaatcatctgggcag 280  Q
    ||||||||| ||||||||||||    
T  20826939 aagcgaccactcatctgggcag 20826960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 81 - 280
Target Start/End: Complemental strand, 28925481 - 28925281
Alignment:
Q  81 cagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcact 180  Q
    ||||| ||||||||||||||||||||| ||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||| |||||||||    
T  28925481 cagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcact 28925382  T
Q  181 gttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggc 278  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||||||| | ||  ||||||||||||||| |||||| |||    
T  28925381 gttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctaggc 28925283  T
Q  279 ag 280  Q
    ||    
T  28925282 ag 28925281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 287
Target Start/End: Complemental strand, 18408481 - 18408351
Alignment:
Q  157 tttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgc 256  Q
    |||| ||||||  |||||||||| ||||||||||| |||| |  ||||  | ||||||||||||||||||||||||||||||||||||| | |  |||||    
T  18408481 ttttcgcttacaggctcgctcacagttcgcttaagtgaactgacaaaacaggattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgc 18408382  T
Q  257 ttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||| |||||| || |||||||||    
T  18408381 ttaagcgaccattcatctcggtagtgcaaaa 18408351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19236321 - 19236410
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |  |||||||||||||    
T  19236321 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 19236410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 28933178 - 28932980
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctggg-ttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatc-aaaatggtttt 98  Q
    ||||||| |||||  ||||||||||||||||| ||||| |||||||||||||| |||||| ||||||  ||||||||  | ||||| | |||||||||||    
T  28933178 cgcttaaacgaccaacttacagtaggtctggggttcagttcgcttacgggtcgctcacggctcgctttggcgaactttggacagaaacaaaaatggtttt 28933079  T
Q  99 tcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaa-tcaaacttaatttttgcttaccagctcgctcact-gttcgcttaagcgaa 195  Q
    ||||||||| |||  |||||  ||||| | | | |||   ||||| ||  ||||||||||||| ||||||||  ||||||||| |||||||||||||||    
T  28933078 tcgctcacaaggtcccttaccattcgcctaaccgaatttctggcaaaacccaaacttaattttcgcttaccatttcgctcactggttcgcttaagcgaa 28932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22467201 - 22467290
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |  |||||||||||||    
T  22467201 cgcttaaccgaccagcttacagtaggtctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 22467290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 22439324 - 22439157
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcag 219  Q
    |||| ||| ||| ||| |||||||||||||||   |||||| |||||| ||||||||| |||||||||| ||||||||| ||||  ||  || ||||  |    
T  22439324 gttcacttaagcgaattcttggcagaatcaaatcgaattttcgcttacaagctcgctctctgttcgcttgagcgaacggctaaagacgatttttgggttg 22439225  T
Q  220 cttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||  | |||||| ||||||||||||| | |  |||||||||||||| | |||||||| ||||||||||    
T  22439224 ctaacatgaatgttcgcttaagcgacgggtcgttcgcttaagcgactattcatctggacagtgcaaaa 22439157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22460577 - 22460666
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||| |||||  |||||| |||||| |||||| |  |||||||||||||    
T  22460577 cgcttaagcgaccagcttacagtaggtctgggttcaattcgcttatgggtcactcacggctcgcttaagcgaattcttggcagaatcaaa 22460666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 22439370 - 22439327
Alignment:
Q  2 gcttaagcgaccggcttacagtaggtctgggttcagctcgctta 45  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  22439370 gcttaagcgaccggcttacagtaagtctgggttctgctcgctta 22439327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 18408575 - 18408450
Alignment:
Q  2 gcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcg 101  Q
    ||||||||||||||||||||| | ||  |||||| ||||||| |||| ||| |  ||  |||||| |||||||||||||||||||  ||    |||||||    
T  18408575 gcttaagcgaccggcttacagaaagttggggttccgctcgctaacggttcgcttgcgactcgcttaagcgaacttctggcagaatggaataattttttcg 18408476  T
Q  102 ctcacagggttgcttacagttcgctt 127  Q
    || ||||| | ||| |||||||||||    
T  18408475 cttacaggctcgctcacagttcgctt 18408450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 19405289 - 19405324
Alignment:
Q  162 gcttaccagctcgctcactgttcgcttaagcgaacg 197  Q
    |||||||||||||||||||| |||||||||||||||    
T  19405289 gcttaccagctcgctcactggtcgcttaagcgaacg 19405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 8046528 - 8046222
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  8046528 cgcttaagcgaccaacttatagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 8046429  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||||||| ||||||  ||||||| ||| ||| ||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||    
T  8046428 gctcacagggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcacttaccagttcgctcacggttcgcttaagcgaacgggt 8046329  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttta 299  Q
    ||||||||||||| ||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  8046328 aaaatcgcattctaggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggcagtgcaaaaacctacggtttca 8046229  T
Q  300 gacctct 306  Q
    |||||||    
T  8046228 gacctct 8046222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 53483062 - 53483373
Alignment:
Q  1 cgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||    
T  53483062 cgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggttttt 53483161  T
Q  100 cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||||||||| ||||||  ||||||||||| ||| |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  53483162 cgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg 53483261  T
Q  200 -taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||     
T  53483262 caaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcgcttaagcgaccattcgtctggacagtgcaaaacctacggtttc 53483361  T
Q  299 agacctcttctc 310  Q
    ||||| ||||||    
T  53483362 agaccacttctc 53483373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 56 - 310
Target Start/End: Original strand, 15407552 - 15407807
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||  |||||||||||| ||  ||||||||||||||| | |    
T  15407552 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttcgcttatggttcgcttgagcgaactcttggcagaatcaaattaa 15407651  T
Q  156 atttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcg 255  Q
    ||||| ||||||  ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||||||||| | |  ||||    
T  15407652 attttcgcttacaggctcgctcactgttcgcttaagcgaactgacaaaatcgcattctgggcagcttgcttgaatgctcacttaagcgacgggtcgttcg 15407751  T
Q  256 cttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    |||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||    
T  15407752 cttaagcgaccattcatctgggcagtgcaaaaacctacgggttcagacctcttctc 15407807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 16147405 - 16147247
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagc 220  Q
    |||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  16147405 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagc 16147306  T
Q  221 ttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
     | | |||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  16147305 -tacatgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccactcatctgggcag 16147247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 280
Target Start/End: Original strand, 11847583 - 11847744
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgca-ttctgggca 218  Q
    |||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| | |||||||      
T  11847583 gttcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacaggcaaaatcgtatttctgggtg 11847682  T
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||||||||||||||||||||||| | |   ||||||||||||||  ||||||||||||    
T  11847683 gcttgcttgaatgctcgcttaagcgacgggtagctcgcttaagcgaccgctcatctgggcag 11847744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 13887352 - 13887430
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  ||||||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||    
T  13887352 attctgggttgcttgcttgaatgctcgcttaagcgacaggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 13887430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16147465 - 16147376
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  16147465 cgcttaagcgaccatcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 16147376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 14486229 - 14486329
Alignment:
Q  211 tctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttct 309  Q
    ||||||||||| ||||||||||||||||||||||  | |  |||||||||||||||| |||||||||||| || ||||||||||| || |||||||||||    
T  14486229 tctgggcagctagcttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccactcatctgggcagggcaaaaacctacgggttcagacctcttct 14486328  T
Q  310 c 310  Q
    |    
T  14486329 c 14486329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 13888209 - 13888287
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  ||||||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  13888209 attctgggttgcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 13888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 15307687 - 15307765
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  ||||||||||||||||||||||||| ||| |  ||||||||||||| || |||||||||||||||||||    
T  15307687 attctgggttgcttgcttgaatgctcgcttaagcgtcaggtcgttcgcttaagcgatcattcatctgggcagtgcaaaa 15307765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 15244793 - 15244860
Alignment:
Q  220 cttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||| |||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  15244793 cttgcttgaattctcgcttaagcgacgggtcattcgcttaagcgaccattcatctgggcagtgcaaaa 15244860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 8834486 - 8834540
Alignment:
Q  233 tcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  8834486 tcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 8834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 11847560 - 11847614
Alignment:
Q  36 agctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||||||| ||||||||||||| |||||| |  |||||||||||||    
T  11847560 agctcgcttacgggtcgctcacggttcgcttaagcgaattcttggcagaatcaaa 11847614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15244636 - 15244719
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcaga 84  Q
    ||||||||||||||||||||||   ||  | |||| ||||||| | || ||| ||||||||||||| |||||||||||| ||||    
T  15244636 cgcttaagcgaccggcttacagagagttggcgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctgacaga 15244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 8834453 - 8834498
Alignment:
Q  220 cttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgac 265  Q
    |||||||||||||||||||||||||| | |  ||||||||||||||    
T  8834453 cttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgac 8834498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 539 - 849
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||  | ||||||||||||||||||||    
T  539 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgattgagcgaactttggacagaatcaaaatggtttttc 638  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| ||||||  ||||||| ||| ||| ||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  639 gctcacggggtcgcttaccattcgcttaagcgaattcttggcagaatcatacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggt 738  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttta 299  Q
    ||||||||||||||||||| || |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||| |    
T  739 aaaatcgcattctgggcagtttacttgaatgctcgcttaagagacggctgcttcgcttaagcgaccaatcatctgggcagtgcaaaaacctacgatttca 838  T
Q  300 gacctcttctc 310  Q
     ||||||||||    
T  839 aacctcttctc 849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 15082 - 14783
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15082 cgcttaagcgaccggcttacagtaagtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 14983  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| |||||| |||||||| ||| ||||||||||||||||||| |||||||| ||||||||           |||||||||||||||||||     
T  14982 gctcaccgggtcgcttacggttcgcttaagcgaatccttggcagaatcaaatttaattttcgcttacca-----------gttcgcttaagcgaacgggc 14894  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttta 299  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  | | ||||||||||||||||||||||||||||||||| |||||||||| ||| |    
T  14893 aaaatcgcattctgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaagcgaccaatcatctgggcagtgcaaaaacctacgatttca 14794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 396 - 705
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||| ||||||||| | |||||||||| ||||||||| || ||| |  |||||||||| |||||||||||| ||||||||||||||||||||    
T  396 cgcttaagcgactggcttacagaaagtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttc 495  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||||||| |||||| |||||||| ||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||     
T  496 gctcacagggtcgcttacggttcgcttaagcgaattcttggcagaatcaaatttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggc 595  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttta 299  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| | | ||||||||||||||| |||||||| |||||||| |||||||||||||| |    
T  596 aaaatcgcattttgggcagcttgcttgaatgttcgcttaagcgacggctacttcgcttaagcgactaatcatct-ggcagtgcaaaaacctacggtttca 694  T
Q  300 gacctcttctc 310  Q
    |||| ||||||    
T  695 gaccccttctc 705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 7541 - 7850
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||| ||||||||| | |||||||||| ||||||||| || ||| |  |||||||||| |||||||||||| ||||||||||||||||||||    
T  7541 cgcttaagcgactggcttacagaaagtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttc 7640  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    ||||||||||| |||||| |||||||| ||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||     
T  7641 gctcacagggtcgcttacggttcgcttaagcgaattcttggcagaatcaaatttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggc 7740  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggtttta 299  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| | | ||||||||||||||| |||||||| |||||||| |||||||||||||| |    
T  7741 aaaatcgcattttgggcagcttgcttgaatgttcgcttaagcgacggctacttcgcttaagcgactaatcatct-ggcagtgcaaaaacctacggtttca 7839  T
Q  300 gacctcttctc 310  Q
    |||| ||||||    
T  7840 gaccccttctc 7850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 180; Significance: 3e-97; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 9272 - 8961
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  9272 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttatgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 9173  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaact-taatttttgcttaccagctcgctcactgttcgcttaagcgaacggg 199  Q
    |||||| |||| ||||||  |||| || ||| ||| |||||||||||||||||  |||| ||||||||||| |||||||| ||| |||||||||||||||    
T  9172 gctcacggggtcgcttaccattcggttaagcgaattcttggcagaatcaaactgaaattcttgcttaccagttcgctcacggtttgcttaagcgaacggg 9073  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcg-acagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |||||||||||||||||||  || |||||||||||||||||||| |  | |||||||||||||| ||||||||||||||||||||||||||||||||||     
T  9072 taaaatcgcattctgggcaatttccttgaatgctcgcttaagcgaatgggtgcttcgcttaagcaaccaatcatctgggcagtgcaaaacctacggtttc 8973  T
Q  299 agacctcttctc 310  Q
    ||||||||||||    
T  8972 agacctcttctc 8961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 2330 - 2284
Alignment:
Q  264 accaatcatctgggcagtgcaaaacctacggttttagacctcttctc 310  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  2330 accaatcatctgggcagtgcaaaacctacggtttcagacctcttctc 2284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 180; Significance: 3e-97; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 111273 - 111571
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||  |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||    
T  111273 cgcttaagcgaccaacttacagtaggtatgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttc 111372  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggt 200  Q
    |||||| |||| ||||||  ||||||| ||| ||| |||||||||| ||||||||||||| |||||||||           |||||||||||||||||||    
T  111373 gctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccag-----------ttcgcttaagcgaacgggt 111461  T
Q  201 aaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttag 300  Q
    |||||||||| |||||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  111462 aaaatcgcatactgggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcag 111561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 142 - 298
Target Start/End: Complemental strand, 91756 - 91600
Alignment:
Q  142 cagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 241  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| || |||||| || |  | |||||| |||||||||    
T  91756 cagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaatgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaag 91657  T
Q  242 cgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |||| |||||||||||||||||||||||| ||||||||| | |||| ||||| ||||    
T  91656 cgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgatttt 91600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 142 - 298
Target Start/End: Complemental strand, 97482 - 97326
Alignment:
Q  142 cagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 241  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| || |||||| || |  | |||||| |||||||||    
T  97482 cagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaatgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaag 97383  T
Q  242 cgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
    |||| |||||||||||||||||||||||| ||||||||| | |||| ||||| ||||    
T  97382 cgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgatttt 97326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 91836 - 91747
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||  | ||||||||||    
T  91836 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgggcgaactttggacagaatcaaa 91747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 97562 - 97473
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||  | ||||||||||    
T  97562 cgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgggcgaactttggacagaatcaaa 97473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 56 - 310
Target Start/End: Original strand, 49595 - 49850
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    |||||||| ||||||||||||  | |||||||||||||||||||||||||| |||| ||||||  ||||||| ||| ||| ||||||||||||| |||||    
T  49595 acggttcgattgagcgaactttggacagaatcaaaatggtttttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaatcatactta 49694  T
Q  156 atttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcg 255  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | |||||||    
T  49695 attttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagagacggctgcttcg 49794  T
Q  256 cttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    |||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||    
T  49795 cttaagcgaccaatcatctgggcagtgcaaaaacctacgatttcaaacctcttctc 49850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 10732 - 10966
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||           |||||||||||||||||||| ||||||||||||||||||||    
T  10732 cgcttaagcgaccggcttacagtaagtctgggttctgctcgcttaggg-----------ttcgcttgagcgaacttctgacagaatcaaaatggtttttc 10820  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacggg- 199  Q
    ||||||||||| |||||  |||||||| ||| ||| || |||||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||     
T  10821 gctcacagggtcgcttatggttcgcttaagcgaattctgggcagaatcaaatttaattttcgcttacaagttcgctcacggttcgcttaagcgaacgggc 10920  T
Q  200 taaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgac 245  Q
     |||||||||||||||||| |||||||||||| |||||||||||||    
T  10921 aaaaatcgcattctgggcaacttgcttgaatgttcgcttaagcgac 10966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 10953 - 11000
Alignment:
Q  252 ttcgcttaagcgaccaatcatctgggcagtgca-aaacctacggtttt 298  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  10953 ttcgcttaagcgaccaatcatttgggcagcgcagaaacctacggtttt 11000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 56 - 310
Target Start/End: Complemental strand, 23235 - 22979
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggttttt-cgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactt 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||| ||  | | |||||  |||||||||||| ||  ||||||||||||||| ||    
T  23235 acggttcgcttgagcgaacttctggcagaatgaaaatggttttttcgcttacgagttcgcttatggttcgcttgagcgaactcttggcagaatcaaa-tt 23137  T
Q  155 aattttt-gcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgctt 253  Q
    ||||| | ||||||  ||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||||||||||||| | |  ||    
T  23136 aatttctcgcttacaggctcgctcactgttcgcttaagcgaactgacaaaatcgcattctggacagcttgcttgaatgctcgcttaagcgacgggtcgtt 23037  T
Q  254 cgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    |||||||||||||| ||||||||| ||||| ||||||||||| |||| ||||||||||    
T  23036 cgcttaagcgaccattcatctgggtagtgcaaaaacctacgggtttaaacctcttctc 22979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 15518 - 15350
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggt-ttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactt 154  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||  | | |||||  |||||||||||| ||  |||| || ||||||| ||    
T  15518 acggttcgcttgagcgaacttctggcagaatgaaaatggttttttcgcttacgagttcgcttatggttcgcttgagcgaactcttgacataatcaaa-tt 15420  T
Q  155 aattt-ttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttg 223  Q
    ||||| | ||||||  |||||||||||||||||| |||||||| |  || ||| ||||||||||||||||    
T  15419 aatttctcgcttacaggctcgctcactgttcgctgaagcgaactgacaagatcacattctgggcagcttg 15350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 8e-55; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 20851707 - 20851531
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  20851707 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 20851608  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  20851607 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 20851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 20858334 - 20858158
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  20858334 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 20858235  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  20858234 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 20858158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 21705756 - 21705932
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  21705756 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 21705855  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttt 298  Q
      | |||||| |||||||||| || |||||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  21705856 cacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgatttt 21705932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 21710299 - 21710457
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  21710299 tcgcttaagcgaattcttggcagaatcaaatttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 21710398  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
      | |||||| |||||||||| || ||||||| ||||||||||||||||||||||||||    
T  21710399 cacgtgaatgttcgcttaagcaacggatgctttgcttaagcgaccaatcatctgggcag 21710457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 56 - 287
Target Start/End: Original strand, 18712214 - 18712445
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    ||||| ||||| |||||||||||| |||||| ||| || ||||||||| || || | ||||||||||||||||||| ||  |||| ||||||  || |      
T  18712214 acggtacgcttaagcgaacttctgacagaatgaaattgatttttcgcttacgggttcgcttacagttcgcttgagcgaactcttgacagaatggaattat 18712313  T
Q  156 atttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcg 255  Q
     |||||||||||  |||||||||| ||| |||||||||||| |  ||||  | ||||||||||||||||||||||||||||||||||||| | |  ||||    
T  18712314 ttttttgcttacaggctcgctcacagtttgcttaagcgaactgacaaaacagaattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcg 18712413  T
Q  256 cttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||||||||||| |||||||||||||||||||    
T  18712414 cttaagcgaccattcatctgggcagtgcaaaa 18712445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41111300 - 41111407
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggttttt 99  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||    
T  41111300 cgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttttt 41111399  T
Q  100 cgctcaca 107  Q
    ||||||||    
T  41111400 cgctcaca 41111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20858394 - 20858305
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  20858394 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 20858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21705696 - 21705785
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  21705696 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20851767 - 20851678
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |  |||||||||||||    
T  20851767 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 20851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21710239 - 21710328
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| || ||| |||||| |||||| |||||| |  |||||||||||||    
T  21710239 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatggttcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21710328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22030225 - 22030157
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  22030225 gcttgcttgaatgctcgcttaagcgactggtctttcgcttaagcgaccattcatctgggcagtgcaaaa 22030157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 19961718 - 19961793
Alignment:
Q  170 gctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgac 245  Q
    ||||||| || |||||||||||||||||| ||||| |  ||||||||  ||| |||||||||||||||||||||||    
T  19961718 gctcgcttacggttcgcttaagcgaacggctaaaaacaaattctgggttgctagcttgaatgctcgcttaagcgac 19961793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 59 - 310
Target Start/End: Complemental strand, 41166 - 40914
Alignment:
Q  59 gttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaatt 158  Q
    |||||||||||||||||||  |||||||  ||||||||||| ||| || || | ||||   |||   |||||| ||  ||||||||||||||| | ||||    
T  41166 gttcgcttgagcgaacttcaagcagaatgtaaatggttttttgcttacgggttcgcttctggtttcattgagcgaactcttggcagaatcaaattaaatt 41067  T
Q  159 tttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgctt 258  Q
    || ||||||  ||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||    
T  41066 ttcgcttacaggctcgctcactgttcccttaagcgaactgacaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgctt 40967  T
Q  259 aagcgaccaatcatctgggcagtgcaaaa-cctacggttttagacctcttctc 310  Q
    ||| ||||| ||||||||||||||||||| ||||||| || | ||||||||||    
T  40966 aagtgaccattcatctgggcagtgcaaaagcctacgggttcaaacctcttctc 40914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 115 - 298
Target Start/End: Complemental strand, 4202 - 4018
Alignment:
Q  115 ttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctg 214  Q
    |||| |||||||||||| ||  ||||||||||||||| |   |||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  4202 ttacggttcgcttgagcgaactcttggcagaatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaaatcgcattctg 4103  T
Q  215 ggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgca-aaacctacggtttt 298  Q
    |||||||||||||||||||||||||||||||   || ||||||| || ||||| |||||||||||||||| ||||||||||||||    
T  4102 ggcagcttgcttgaatgctcgcttaagcgacgactggttcgcttgagtgaccattcatctgggcagtgcagaaacctacggtttt 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 4200 - 4153
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgct 103  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  4200 acggttcgcttgagcgaactcttggcagaatcaaattggtttttcgct 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 4246 - 4089
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagct 221  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  4246 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacaggtaaaatcgtattctgggcag-t 4148  T
Q  222 tgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    | | |||||| ||||||||||||| | |||||||||||||||||||||||||| |||||    
T  4147 tacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatctaggcag 4089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4306 - 4217
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  4306 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 80065 - 79907
Alignment:
Q  122 tcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagc 220  Q
    |||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  80065 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagc 79966  T
Q  221 ttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
     | | |||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  79965 -tacatgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccactcatctgggcag 79907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 80125 - 80036
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| |  |||||||||||||    
T  80125 cgcttaagcgaccatcttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 80036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 81702 - 81624
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  |||| |||||||||||||||||||||| | |  |||||||| ||||||| |||| ||||||||||||||    
T  81702 attctgggttgcttacttgaatgctcgcttaagcgacgggttgttcgcttatgcgaccattcatttgggcagtgcaaaa 81624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 181 - 298
Target Start/End: Original strand, 134979 - 135096
Alignment:
Q  181 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  134979 gttcgcttaggcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcag 135078  T
Q  281 tgcaaaacctacggtttt 298  Q
     | |||| ||||| ||||    
T  135079 ggtaaaagctacgatttt 135096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 134871 - 134960
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| |  || ||||||||||    
T  134871 cgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttaagcgaattcttgacagaatcaaa 134960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 24053 - 23956
Alignment:
Q  213 tgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttagacctcttctc 310  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  24053 tgggcagcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcatacctcttctc 23956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 287
Target Start/End: Complemental strand, 34917 - 34686
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||||| || || | |||||  |||||||||||| ||  |||||||||||  || |||    
T  34917 acggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttcgcttatggttcgcttgagcgaactcttggcagaatggaa-tta 34819  T
Q  156 attttt-gcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttc 254  Q
     ||||| | ||||  |||||||||| ||||||||||| ||||   |||||  | |||||||| ||||||| ||||||||| |||||||||| | |  |||    
T  34818 ttttttcgattacaggctcgctcacagttcgcttaagtgaacttctaaaacagaattctgggaagcttgcgtgaatgctcacttaagcgacgggtcgttc 34719  T
Q  255 gcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||| |||||||||||||||||||    
T  34718 gcttaagcgaccattcatctgggcagtgcaaaa 34686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 120 - 310
Target Start/End: Complemental strand, 102505 - 102314
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaattttt-gcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggca 218  Q
    |||||||||||| ||  ||||||||||||||| ||| ||||| ||||||  |||||||||| |||||||||||||||| |  ||||  | |  |||||||    
T  102505 gttcgcttgagcgaactcttggcagaatcaaa-ttattttttcgcttacaggctcgctcacggttcgcttaagcgaactgacaaaacagaaaactgggca 102407  T
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
     ||||||||| |||||||||||||||| | |  |||||||||||||||| ||||||||||||||| ||||||||||| || | ||||||||||    
T  102406 acttgcttgagtgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctcttctc 102314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 102508 - 102437
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgctt 127  Q
    ||||||||||||||||||||  ||||||||||||| |  ||||||||| ||||| | ||| || ||||||||    
T  102508 acggttcgcttgagcgaactcttggcagaatcaaattattttttcgcttacaggctcgctcacggttcgctt 102437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 287
Target Start/End: Complemental strand, 637 - 417
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactta 155  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||||| || ||           ||||||||||| ||  |||||||||||  || |||    
T  637 acggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacggg-----------ttcgcttgagcgaactcttggcagaatggaa-tta 550  T
Q  156 attttt-gcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttc 254  Q
     ||||| ||||||  |||||||||| |||| |||||||||||   |||||    ||||||||||||||||||||||||||||||||||||| | |  |||    
T  549 ttttttcgcttacaggctcgctcacagttcacttaagcgaacttctaaaacataattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttc 450  T
Q  255 gcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||||||| |||| |||||||||||||||||||    
T  449 gcttaagcaaccattcatctgggcagtgcaaaa 417  T

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Target: scaffold0139 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 15486 - 15408
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||| ||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  15486 attctgggcagctagcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 15408  T

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Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 16192 - 16490
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaaatggtttttc 100  Q
    |||||||||||||||||||||| | ||  |||||| ||||||| |||| ||| |  ||||||| || |||||||||||| || ||| ||| || ||||||    
T  16192 cgcttaagcgaccggcttacagaaagttggggttccgctcgctaacggttcgcttgcggttcggttaagcgaacttctgacataatgaaattgatttttc 16291  T
Q  101 gctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaacttaattttt--gcttaccagctcgctcactgttcgcttaagcgaacgg 198  Q
    ||| || ||           ||||||||||| ||  ||||| |||||  || ||| |||||  ||||||  |||||||||| |||||||||||| ||| |    
T  16292 gcttacggg-----------ttcgcttgagcgaactcttggtagaatggaa-ttatttttttcgcttacaggctcgctcacagttcgcttaagcaaactg 16379  T
Q  199 gtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttt 297  Q
      ||||  | ||||||||||||||||||||||| ||||||||||||| | |  |||||||  ||||||| |||||| ||||| || ||||||||||| ||    
T  16380 acaaaacagaattctgggcagcttgcttgaatgttcgcttaagcgacgggtcgttcgctt--gcgaccattcatctaggcagcgcaaaaacctacgggtt 16477  T

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Target: scaffold0138 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 1385 - 1463
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  ||||||||||||||||||||||||||| | |  |||||||||||||||| |||||| ||||||||||||    
T  1385 attctgggttgcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctaggcagtgcaaaa 1463  T

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Target: scaffold0094 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 51822 - 51890
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||| |||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||    
T  51822 gcttccttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 51890  T

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Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 121479 - 121547
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||||||||||||||||| |    |||||||||||||||| |||||||||||||||||||    
T  121479 gcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaa 121547  T

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Target: scaffold0031; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 132356 - 132424
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||||||||||||||||| |    |||||||||||||||| |||||||||||||||||||    
T  132356 gcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaa 132424  T

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Target: scaffold0310 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 17400 - 17551
Alignment:
Q  114 cttacagttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcattct 213  Q
    ||||| |||||||| ||| ||| || ||||||||||||   |||||| |||||| ||||||||| |||||||||| ||||||||| ||||  ||  ||||    
T  17400 cttacggttcgcttaagcgaattctgggcagaatcaaaacaaattttcgcttacaagctcgctctctgttcgcttgagcgaacggctaaagacgatttct 17499  T
Q  214 gggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgac 265  Q
    |||  |||  | |||||| ||||||||||||| | |  ||||||||||||||    
T  17500 gggttgctaacatgaatgttcgcttaagcgacgggtcgttcgcttaagcgac 17551  T

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Target: scaffold0310; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6930 - 6976
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  6930 cgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacg 6976  T

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Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 1645 - 1713
Alignment:
Q  219 gcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||| |||||||||||||||||||||| |    |||||||||||||||| |||||||||||||||||||    
T  1645 gcttacttgaatgctcgcttaagcgacgggacgttcgcttaagcgaccattcatctgggcagtgcaaaa 1713  T

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Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 65662 - 65698
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgac 245  Q
    |||||||| ||||||||||||||||||||||||||||    
T  65662 attctgggaagcttgcttgaatgctcgcttaagcgac 65698  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 116331 - 116478
Alignment:
Q  56 acggttcgcttgagcgaacttctggcagaat-caaaatggtttttcgctcacagggttgcttacagttcgcttgagcaaatccttggcagaatcaaactt 154  Q
    |||||||||||||||||||||||| ||||||  |||||| ||||||||| || || | |||||||||||||||| || ||  |||||||||||  || |     
T  116331 acggttcgcttgagcgaacttctgacagaatgaaaaatgatttttcgcttacgggttcgcttacagttcgcttg-gcgaactcttggcagaatggaatta 116429  T
Q  155 aatttttgcttaccagctcgctcactgttcgcttaagcgaacgggtaaa 203  Q
     ||||| ||||||  |||| ||||  |||||||| ||||||||| ||||    
T  116430 tattttcgcttacaggctcactcatagttcgcttgagcgaacggctaaa 116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 129146 - 129068
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||  |||| |||||||||||||||||||||| | |  |||||||||||||  | ||||||| |||||||||||    
T  129146 attctgggttgcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgattattcatctgagcagtgcaaaa 129068  T

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Target: scaffold0483 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 11524 - 11425
Alignment:
Q  181 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    |||||||||||||||||| ||||| |  ||||| ||  ||| ||||||||||||||||||||||||| |   ||||| ||||||| | ||||||||||||    
T  11524 gttcgcttaagcgaacggctaaaaacaaattctaggttgctagcttgaatgctcgcttaagcgacaggtagctcgctcaagcgacaactcatctgggcag 11425  T

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Target: scaffold0335 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 3114 - 3037
Alignment:
Q  210 ttctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||||||  |||||||||||||| |||| ||||||  | |  |||||||||||||||| |||||||||||||||||||    
T  3114 ttctgggttgcttgcttgaatgcgcgctcaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 3037  T

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Target: scaffold0634 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3094 - 3136
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgct 43  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  3094 cgcttaagcgaccggcttacagtaggtctgggtttcgctcgct 3136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 3232 - 3301
Alignment:
Q  211 tctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcag 280  Q
    |||||||| || ||||||||| ||||||||||||| | |   ||||||||||||||| ||||||||||||    
T  3232 tctgggcaactagcttgaatgttcgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcag 3301  T

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Target: scaffold0476 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3926 - 3837
Alignment:
Q  1 cgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcggtcacggttcgcttgagcgaacttctggcagaatcaaa 90  Q
    |||||||||||||||||||||||  |||||||||| ||||  |||||| ||| |  |||||||||| ||||||    |||||||||||||    
T  3926 cgcttaagcgaccggcttacagtgagtctgggttctgctcaattacggttcgcttgcggttcgcttaagcgaatccttggcagaatcaaa 3837  T

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Target: scaffold0476; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 3868 - 3800
Alignment:
Q  120 gttcgcttgagcaaatccttggcagaatcaaacttaatttttgcttaccagctcgctcactgttcgctt 188  Q
    |||||||| ||| |||||||||||||||||||   |||||| |||||| | ||||||| ||||||||||    
T  3868 gttcgcttaagcgaatccttggcagaatcaaatcaaattttcgcttacaaactcgctctctgttcgctt 3800  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 525332 - 525409
Alignment:
Q  210 ttctgggcagcttgcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    |||||||  ||||||||||||||||| | ||||||  | |  |||||||||||||||| |||||| ||||||||||||    
T  525332 ttctgggttgcttgcttgaatgctcgttcaagcgatgggtcgttcgcttaagcgaccattcatctcggcagtgcaaaa 525409  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 17750 - 17833
Alignment:
Q  223 gcttgaatgctcgcttaagcgacagatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggttttagacctct 306  Q
    ||||||||||| ||||||||||| | |   ||||||||||||||| ||||||||||||   ||||| ||||| || ||||||||    
T  17750 gcttgaatgcttgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcaggcaaaaacttacgggttcagacctct 17833  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 833 - 907
Alignment:
Q  57 cggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgctcacagggttgcttacagttcgcttgagc 131  Q
    |||||||||| |||||||||||| ||||||  ||||| ||||||||| || || | ||| || ||||||||||||    
T  833 cggttcgcttaagcgaacttctgacagaatggaaatgatttttcgcttacgggttcgctcacggttcgcttgagc 907  T

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Target: scaffold0317; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 974 - 1008
Alignment:
Q  209 attctgggcagcttgcttgaatgctcgcttaagcg 243  Q
    |||||||| ||||||||||||||||||||||||||    
T  974 attctgggtagcttgcttgaatgctcgcttaagcg 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 287
Target Start/End: Complemental strand, 18874 - 18840
Alignment:
Q  253 tcgcttaagcgaccaatcatctgggcagtgcaaaa 287  Q
    ||||||||||||||| |||||||||||||||||||    
T  18874 tcgcttaagcgaccattcatctgggcagtgcaaaa 18840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 30466 - 30524
Alignment:
Q  253 tcgcttaagcgaccaatcatctgggcagtgc-aaaacctacggttttagacctcttctc 310  Q
    ||||||||||||||| |||||||||||| || ||||||||||| |  ||||||||||||    
T  30466 tcgcttaagcgaccactcatctgggcagggcaaaaacctacgggtccagacctcttctc 30524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 1002 - 1042
Alignment:
Q  154 taatttttgcttaccagctcgctcactgttcgcttaagcga 194  Q
    ||||||| |||||||||||||||||| | ||||||||||||    
T  1002 taattttcgcttaccagctcgctcaccggtcgcttaagcga 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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