View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18161_high_33 (Length: 325)
Name: NF18161_high_33
Description: NF18161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18161_high_33 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 32 - 302
Target Start/End: Complemental strand, 17405911 - 17405645
Alignment:
| Q |
32 |
tatatattcctcattttcctagatcagattcaaattaggatattttccaagtttcgaaatggaatttatgttaagacatatcaaaacgacaagatttgta |
131 |
Q |
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| T |
17405911 |
tatatattccccattttcctagatcagattcaaattaggatattttccaagtttcaaaatggaatttatgttaagacatatcaaaacgacaagatttgta |
17405812 |
T |
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| Q |
132 |
atcaaaatcgaatcaagagcaaccttcctttgttttccccaaagagtgtacgtagtaagaattattaaattaacatgtggtttttccaccataatttttt |
231 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
17405811 |
atcaaaatcgaatcaagagcaaccttcctttgttttccccaaagagt----gtagtaagaattattaaattaacatgtgctttttccaccataatttttt |
17405716 |
T |
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| Q |
232 |
ctcttagtatatatatttgtannnnnnnagctttacaagtataatttacgaagtcaatatataaaagtagt |
302 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17405715 |
ctcttagtatatatatttgtatttttttagctttacaagtataatttacgaagtcaatatataaaagtagt |
17405645 |
T |
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