View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18161_low_22 (Length: 375)
Name: NF18161_low_22
Description: NF18161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18161_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 359
Target Start/End: Complemental strand, 22049004 - 22048655
Alignment:
| Q |
9 |
gagatgaaacactggttagagataatatattttaaacataatcaaaacaaattttaacattctccatgttttcacaaaacaatttgattaaacgatcatt |
108 |
Q |
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| T |
22049004 |
gagatgaaacactagttagagataatatattttaaacataatcaaaacaatttttaacattctccatgttttcacaaaacaatttgattaaacgttcact |
22048905 |
T |
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| Q |
109 |
gatattccgaccacgtgaatgctaataattccttattgtattgaacctctcttttttaattggattactcatcaatcttaggataagaacaaggctataa |
208 |
Q |
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|||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
22048904 |
gatatttcgaccacgtgaatgctaataatttcttattg-attgaacctctcttttttaattggattactcatcaatcttaggataagaacaaggctatta |
22048806 |
T |
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| Q |
209 |
taatcactatgtattgattgtaattcccaaccatgacaccatcaccatgatgccggtgcattcaattccacccgtggaataagggtcaaagatgtttgaa |
308 |
Q |
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||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22048805 |
taatcactatgtattgattgtcattcccaaccataacaccatcaccatgatgccggtgcattcaattccacccgtggaataagggtcaaagatgtttgaa |
22048706 |
T |
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| Q |
309 |
gaggacaattcttaagattaaagtgtacttagatagttcattgtttattga |
359 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||| | |||||| |
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| T |
22048705 |
gaggacaatttttaagattaaagtgtacttagatagttcattatctattga |
22048655 |
T |
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