View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18161_low_47 (Length: 242)
Name: NF18161_low_47
Description: NF18161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18161_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 47808621 - 47808413
Alignment:
| Q |
18 |
cagtttcatcatcacttgttagtggatatggttttggcttccaacagaggaaaaactatttacactatcaaagcaagaagaatagtcttctatactaggc |
117 |
Q |
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| T |
47808621 |
cagtttcatcatcacttgttagtggatatggttttggcttccaacagaggaaaaactatttacaccatcaaagcaagaagaatagtcttctatactaggc |
47808522 |
T |
|
| Q |
118 |
tcctagctatcggtttcatcacggtcttcatcagaatgatcatattttacctccacatgctcgggagaaaccgatggaacacgccttaacagttgttctt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47808521 |
tcctagctatcggtttcatcacggtcttcatcagaatgatcatattttacctccacatgctcgggagaaaccgatggaacacgccttaacagttgttctt |
47808422 |
T |
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| Q |
218 |
gtttctctg |
226 |
Q |
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||||||||| |
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| T |
47808421 |
gtttctctg |
47808413 |
T |
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