View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18161_low_56 (Length: 201)
Name: NF18161_low_56
Description: NF18161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18161_low_56 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 9471111 - 9471286
Alignment:
| Q |
10 |
catcatcaacaaatatgaaatctccaaatccatttgaacttgaattcgccaagtttgactttttggtagttccctattcaaattgacccaaacactcaaa |
109 |
Q |
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| T |
9471111 |
catcatcaacaaatatgaaatctccaaatccatttgaacttgaattcgccaagtttgactttttggtagttccctattcaaattgacccaaacactcaaa |
9471210 |
T |
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| Q |
110 |
atcttagtcaaaaggtaagaatatgtacagtgtagtgaaatttcaccaaaggaataaaagattctacctcagcatt |
185 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9471211 |
atcttagtcaaaaggtaagaatatgtacagtgtagtgaaatttcaccaaaggaataaaagattctacctcagcatt |
9471286 |
T |
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