View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18162_high_30 (Length: 289)
Name: NF18162_high_30
Description: NF18162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18162_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 3639305 - 3639556
Alignment:
| Q |
19 |
aatgctctcttgttcttcttcccacaatcactacaccttcacccacgcgctcaaagcatgttgttcctatcatgcgcacgccaaaggtcttgaaatccac |
118 |
Q |
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| T |
3639305 |
aatgctctcttgttcttcttcccacaatcactacaccttcacccacgcgctcaaagcatgttgttcctatcatgcgcacgccaaaggtcttgaaatccac |
3639404 |
T |
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| Q |
119 |
gcgcgtctcatcaaatccggtcacatcttcgatggcttcatcaaaaacactttactctatttttacctctcctcaaacgacgtcgtttcagcaacgcgcg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3639405 |
gcgcgtctcatcaaatccggtcacatcttcgatggcttcatcaaaaacactttactctatttttacctctcctcaaacgacgtcgtttcagcaacgcgcg |
3639504 |
T |
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| Q |
219 |
ttttcaaatcaattccttcacccgacgtagtttcatggacttcactaatctc |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3639505 |
ttttcaaatcaattccttcacccgacgtagtttcatggacttcactaatctc |
3639556 |
T |
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